mRNA_E_fasciculatus_S2_contig9759.17753.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 368 bits (944), Expect = 6.030e-119 Identity = 218/372 (58.60%), Postives = 263/372 (70.70%), Query Frame = 1
Query: 1 PLTACMDEIEELYSLIKPVAELIVLCQQTRVPAGQAALIALATLKLTTLNVNKPLNIITPARKLAQGGTAGVGGGERKTTSAPRGPEELTSVASQARVQLEQAVHSRWFRKRYHSPETQ-ATDYVFDMQMALHPTTAALEYVDSLASTPEYAATVKTAITDKIVALAVELKQRDEEREGGEGAADSQGAPAAKRARPTP-PGTVHPVFARSGNKQEEATTAACVSLGLFTK---GGGAVQGPTLEERVRAELKTLQSVQAGSLAGEMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEEL 1101
PL +EI+ELYSLIKPVAELIV CQQT VP GQAA++ LATLKL+T NV+ L+++TP R AQG G GGGERK TS PR LT V AR L A+ R+F + Y S +++ TD+VFDMQM LHPTTA L+YVD L ST +AA VK +ITDKI+ALAVEL +++ ER+ A Q AKRARP PG++ A++ NK+++A TA SLGLF K GG A Q PT E RAEL+TL+ V+AG+L +++ + VL+WWK+W YPLLAR ARVVFGAPASAAVLERDF+DA MM SSRS+ D KYVEMVLFLHGNLDLIPE IPEL E VQ KIPGRL++P PEL L
Sbjct: 281 PLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR--AQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQ---AGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDE---DVQAKIPGRLSNPIPELHGL 644
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 345 bits (885), Expect = 4.490e-109 Identity = 208/369 (56.37%), Postives = 253/369 (68.56%), Query Frame = 1
Query: 1 PLTACMDEIEELYSLIKPVAELIVLCQQTRVPAGQAALIALATLKLTTLNVNKPLNIITPARKLAQGGTAGVGGGERKTTSAPRGPEELTSVASQARVQLEQAVHSRWFRKRYHSPETQATDYVFDMQMALHPTTAALEYVDSLASTPEYAATVKTAITDKIVALAVELKQRDEEREGGEGAADSQGAPAAKRA-RPTPPGTVHPVFARSGNKQEEATTAACVSLGLF-TKGGGAVQGPTLEERVRAELKTLQSVQAGSLAGEMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEEL 1101
PL+ + EI+ELYSLI+PVAE+I CQQT P GQAA++ LA LKL+TLN + PL+I+TPA K QG T G GG E++TT+ R ++LT V +AR L A+H R F KRY S ++T VFDMQM LHP TA L+YV LA T +AA VK ITDKI+ALA +L + ER+G E QG PAAKRA + + PG +P+FA + +E TTA LGL T+ G P ER RAEL+TL+S +L G+ + + VL WWKR E SYPLLARVARVVF APAS V ERD AGRMMTSSRS+ D KYVEMVLFLHGN+DL+PE IPELPA+G N VQTKIPGRL++P EL L
Sbjct: 389 PLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGG-EQRTTA--RAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGIEA---EQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPI--ERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHAL 749
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 317 bits (813), Expect = 7.340e-99 Identity = 196/372 (52.69%), Postives = 240/372 (64.52%), Query Frame = 1
Query: 1 PLTACMDEIEELYSLIKPVAELIVLCQQTRVPAGQAALIALATLKLTTLNVNKPLNIITPARKLAQGGTAGVGGGERKTTSAPRGPEELTSVASQARVQLEQAVHSRWFRKRYHSPETQATDYVFDMQM-ALHPT-TAALEYVDSLASTPEYAATVKTAITDKIVALAVELKQRDEEREGGEGAADSQGAPAAKRARPTP-PGTVHPVFARSGNKQEEATTAACVSLGLFTKGGGAV--QGPTLEERVRAELKTLQSVQAGSLAGEMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEEL 1101
PLT+ +EI+ELYS+IKP A++IV CQQT VP GQ A++ALA LKL TLNV+ PL I+TPARKLAQ T+G+GGGER TS PR T VA R + ++V WF KRY S E+Q TDYV + P T A + +++TP G AAD PAAKRAR PG+VHP+F NK+EEATT SLGLF GG + P+ E+ RAEL L++VQ GSLA ++ + VL+WWK W +YPLLARVARVVFGAPASAAVLERDFS+AGRMMTSSRS+ D+KYVEM++FLHGNLDLIPEDI +L + +TKIPGRLA+P LE+L
Sbjct: 368 PLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDYVSTCRWPCTRPRLTCAALHTGDVSTTP-----------------------------AGSAAADE---PAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEA---AARTKIPGRLANPVERLEQL 704
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 270 bits (690), Expect = 1.420e-83 Identity = 179/371 (48.25%), Postives = 215/371 (57.95%), Query Frame = 1
Query: 1 PLTACMDEIEELYSLIKPVAELIVLCQQTRVPAGQAALIALATLKLTTLNVNKPLNIITPARKLAQGGTAGVGGGERKTTSAPRGPEELTSVASQARVQLEQAVHSRWFRKRYHSPETQATDYVFDMQMALHPTTAALEYVDSLASTPEYAATVKTAITDKIVALAVELKQRDEEREGGEGAADSQGAPAAKRARPTP-PGTVHPVFARSGNKQEEATTAACVSLGLFTK---GGGAVQGPTLEERVRAELKTLQSVQAGSLAGEMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEEL 1101
PL +I+ELYS+IKPVAELIV QQT VP GQAA + LA LKL+T NV+ L+++TPAR AQG G GG E K TS PR + S + TD+VFDMQM LHPTTA L+YVD LAS+ +AA V ITDKI+ LAVEL ++ ER+ A Q AK+ARP P + HP AR+ NK E+A TA SL LF K G A Q PT E AE +TL+ V+AGSL ++ + VL+WW++WE SYPLLAR ARV FGAPA+ D KYVEMVLFLHG LDL PE IPEL E + KIPGRL++P PEL L
Sbjct: 107 PLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR--AQGRPEGAGGVEPKATSVPRCYKPADSAKT--------------------------TDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMERKQ---AGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDE---DIHAKIPGRLSNPVPELHGL 422
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 249 bits (637), Expect = 3.880e-75 Identity = 168/371 (45.28%), Postives = 205/371 (55.26%), Query Frame = 1
Query: 1 PLTACMDEIEELYSLIKPVAELIVLCQQTRVPAGQAALIALATLKLTTLNVNKPLNIITPARKLAQGGTAGVGGGERKTTSAPRGPEELTSVASQARVQLEQAVHSRWFRKRYHSPETQATDYVFDMQMALHPTTAALEYVDSLASTPEYAATVKTAITDKIVALAVELKQRDEEREGGEGAADSQGA----PAAKRARPTPPGTVHPVFARSGNKQEEATTAACVSLGLFTKGGGAVQGPTLEERVRAELKTLQSVQAGSLAGEMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEEL 1101
PLT+ DEI+EL+ +IKP A++IV GER TS PR LT VA R + ++V RWF KRY S ++Q TDYVFDMQMALHPTTA L YVD LAST +A VK+ ITDK+++LAV+L + G + A PAAKRAR A G+K+E P+ E+ RAEL L++VQ GSLA + + VL+WWK W +YPLLARVARVV GA ASAAVLE DFS+AGRMMTSSRS+ D+KYVEM+LFLHGNLDLIPEDI +L +TKIPGRLA+P LE+L
Sbjct: 189 PLTSLTDEIDELHYIIKPAAQVIV-------------------------------------------------SGERPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQA---------AAPGSKEEP---------------------PSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEA---VARTKIPGRLANPVEGLEQL 477
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.290e-64 Identity = 136/268 (50.75%), Postives = 164/268 (61.19%), Query Frame = 1
Query: 304 QAVHSRWFRKRYHSPETQATDYVFDMQMALHPTTAALEYVDSLASTPEYAATVKTAITDKIVALAVELKQRDEEREGGEGAADSQGAPAAKRARPTPPGTVHPVFARSGNKQEEATTAACVSLGLFTKG--GGAVQGPTLEERVRAELKTLQSVQAGSLAGEMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEEL 1101
++V R F KRY S E+Q TDYVFDMQMALHPTTA L YV+ LAST +A VK+ ITDK++ L V L + G D PA EEATT SLGLF G G + + ++ RAEL L++VQ G LA + + VL+WWK W +YPLLARVARVVFGAPASAAVLE FS+AGRM TSSRS+ D+ YVEM++FLHGNL+LIPEDI +L +TK PGRLA+P LE L
Sbjct: 3 ESVDWRRFDKRYKSAESQDTDYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHTG-----DGSTTPAG----------------------EEATTNMHASLGLFGPGVDGQNEEPQSFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEV---VARTKFPGRLANPVDGLEPL 240
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE) HSP 1 Score: 157 bits (397), Expect = 9.260e-39 Identity = 127/380 (33.42%), Postives = 188/380 (49.47%), Query Frame = 1
Query: 1 PLTACMDEIEELYSLIKPVAELIVLCQQTRVPAGQAALIALATLKLTTLNVNKPLNIITPARKLAQGGTAGVGGGERKTTSAPRGPEELTSVASQARVQLEQAVHSRWFRKRYHSPETQA--TDYVFDMQMALHPTTAALEYVDSLASTPEYAATVKTAITDKIVALAVELKQRDEEREGGEGAADSQGAPAAKRARPTPPGTVHPVFARSGNKQEEAT---TAACVSLGLFTKGGGAVQ---GP---TLEERVRAELKTLQSVQAGSLAGEMAPKLVLQWWK-RWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEELS 1104
PL IEELYSL+KP++ ++ Q+ +P G + AL L+ TL+V KPL + P RK+ A TT+ R + L V + R L A+ R+F KRY + +DYVF+M + P L ++ S+ S+ E A V I K+V L V+L + G D+ GA A+ P F RS T T + G+F + GP T++E + E + A + + +++L++W ++ YP +AR ARV+ PAS+AVLERDFS AGR++T +RS YVEMVLFL+GN + IP ++P+L + Q +P RL++PN E E LS
Sbjct: 450 PLAQHKTVIEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEVTVP-RKVTTTDWART----LATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAYPGKATEGDTSGASAS----------APPPFKRSRGPLTVGTSERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKL---SKSQGQEAVPRRLSNPNEETERLS 811
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 134 bits (337), Expect = 4.770e-35 Identity = 66/88 (75.00%), Postives = 74/88 (84.09%), Query Frame = 1
Query: 781 EMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNS 1044
E++ VL+WWKRW SSYPLLAR ARVVFGAPASAAVLE DF DAGR+MTSSRS+TD KYVEM+LFLHGNLDLIPEDIP P++
Sbjct: 31 ELSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQPTAPSA 118
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 120 bits (302), Expect = 3.860e-30 Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 820 WESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTD-TKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTKIPGRLADPNPELEEL 1101
W YPLLARVARVVFGAPASAAVLERDFS+AGRMMTSSR + D T YVEM+LFLHGNLDLIPEDI +L ++KIPGRLA+P LE+L
Sbjct: 2 WAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEA---VARSKIPGRLANPVEGLEQL 93
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE) HSP 1 Score: 114 bits (286), Expect = 2.320e-27 Identity = 61/109 (55.96%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 781 EMAPKLVLQWWKRWESSYPLLARVARVVFGAPASAAVLERDFSDAGRMMTSSRSSTDTKYVEMVLFLHGNLDLIPEDIPELPAEGPNSVQTK-IPGRLADPNPELEELS 1104
E++ + VL+WWKRW SSYPLLAR RVVFGAPASAA YVEM+LFLHGNLDLIP+DIP LP +GP+S K +PGRL +PNP+LE +S
Sbjct: 31 ELSCESVLKWWKRWMSSYPLLARATRVVFGAPASAA-----------------------YVEMILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKNPNPKLERIS 116 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9759.17753.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9759.17753.1 >prot_E_fasciculatus_S2_contig9759.17753.1 ID=prot_E_fasciculatus_S2_contig9759.17753.1|Name=mRNA_E_fasciculatus_S2_contig9759.17753.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=363bp MDEIEELYSLIKPVAELIVLCQQTRVPAGQAALIALATLKLTTLNVNKPLback to top mRNA from alignment at E_fasciculatus_S2_contig9759:1570..2673- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9759.17753.1 ID=mRNA_E_fasciculatus_S2_contig9759.17753.1|Name=mRNA_E_fasciculatus_S2_contig9759.17753.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1104bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9759:1570..2673- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9759:1570..2673- >mRNA_E_fasciculatus_S2_contig9759.17753.1 ID=mRNA_E_fasciculatus_S2_contig9759.17753.1|Name=mRNA_E_fasciculatus_S2_contig9759.17753.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1089bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9759:1570..2673- (Ectocarpus fasciculatus EfasUO2)back to top |