mRNA_E_fasciculatus_S2_contig9757.17752.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9757.17752.1
Unique NamemRNA_E_fasciculatus_S2_contig9757.17752.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: SANT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS5_9PHAE)

HSP 1 Score: 623 bits (1607), Expect = 2.170e-208
Identity = 612/844 (72.51%), Postives = 629/844 (74.53%), Query Frame = 1 
Query:    1 MDSNGDDPTDMKVADIKEVAAPVAESSKVHQQGLAHRSPHPTTSPS-------------SAKKATTTSPRXXXXXXXXXXXLVTPSEAAVGRSPTPPGDYMDVDGEGSGRGKTTESGKGKAELGGRATTSGNNGGGAGRKPRGLVNGLAAAAEPSRVGAAKSPALADDKKSPRVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISPQ-ENAAKPPGKPKFPLAARVGPAAAVPATNGKTRARTPPPIARGSAPATXXXXXXXXXG--KSRAGDL-FSSRNGVASEGLEVFGSDGTKKRLPRALVSKPVPADGPKGARSPPSTGAAAPSSAXXVRSTXXXXXXXXXXXXXXXXXXTGALP-VPTALQQXXXXXXXXXXXXXXXXXXXPRSAEDGEATLSIEEDSSADGKAVKXXXXXXXXXXXXXXSDHAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ASXXXXXXXXXXXXXXXXXRGGYSGRXXXXXXXXXXXXRKGASLLEDYHASKGPSNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQEEDSSEDEEEVEERV----VPVGRSNSGGVLISRAGEPKRLDAGRPSVCGASGGGAGAAGGPH---RXXXXXXXXXXXXXXXXXXXXXXXXXQLQKGGGGRGGGSQPHK 2451
            MDSNGDDPTDMKVADIKEVAAPVAESSKV QQ LA RSPHPT                 S + AT TS              + PS A V RSPTPPGDYMDVDG  SGRGKTTESGKGKAELGG           AGRKPRGL NGLAAA EPS  G  KSPA        RVVG                                ISPQ ENAAKPPGKPK PLAARV PAAAVPATNGKTRA+TPPP+ RGSAPA XXXXXXXXXG  KS AG L FS RNGVAS+GLEV GSDGTKKRLPR L SKPVPADG KGA+SPPS         XX    XXXXXXXXXXXXXXXXXX G  P VP A+QQ       XXXXXXXX    PRSA DGEA L IEE SS DGKA K              SDHAV+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AS          XXXXXXX    SGRXXXXXXXXXXXXRKGASLLEDYHASKGPSNKPKEMRWRTHRMVED+TN+ GKIMYGHVRTGPFGYNSVEGRFPMERPTTLGM+KAG+RRPTVIE+WSP+DVALFEGAISVHGKVFHKVAEEI+GKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQE DSS              V VGRS+SGGVL+SRAGEPKRLDAGR SVCGA G  AGAAGGPH   R       XXXXXXXXXXXXXXXXX QLQKGGGGRGGG QP K
Sbjct:    1 MDSNGDDPTDMKVADIKEVAAPVAESSKVQQQDLARRSPHPTXXXXXXXXXXXXXXXXXSPRTATPTS---------SDRKALAPSSADVDRSPTPPGDYMDVDGVSSGRGKTTESGKGKAELGGXXXXXXXXXXXAGRKPRGLANGLAAA-EPSHAGTTKSPAPXXXXXXXRVVGGTIDTRKDGNTSSCSSTKTSSTSNKMM-----ISPQQENAAKPPGKPKSPLAARVVPAAAVPATNGKTRAKTPPPLVRGSAPAXXXXXXXXXXGEGKSHAGVLPFSGRNGVASDGLEVVGSDGTKKRLPRVLASKPVPADGSKGAKSPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTPPVPIAVQQQQRGRASXXXXXXXXEPSSPRSA-DGEALLRIEEGSSVDGKATKRRRRSRVATPTSGDSDHAVDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASGSSGNGSVSVXXXXXXXXXXVSGRXXXXXXXXXXXXRKGASLLEDYHASKGPSNKPKEMRWRTHRMVEDYTNICGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGIRRPTVIERWSPHDVALFEGAISVHGKVFHKVAEEIDGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQEGDSSXXXXXXXXXXXXXKVAVGRSSSGGVLVSRAGEPKRLDAGRSSVCGAYGSVAGAAGGPHQQHRGAGKKGSXXXXXXXXXXXXXXXXXQQLQKGGGGRGGGGQPQK 828
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: SANT (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK88_ECTSI)

HSP 1 Score: 439 bits (1128), Expect = 1.970e-139
Identity = 496/630 (78.73%), Postives = 509/630 (80.79%), Query Frame = 1 
Query:  586 ISPQ-ENAAKPPGKPKFPLAARVGPAAAVPATNGKTRARTPPPIARGSAPATXXXXXXXXXGKSRAGDL-FSSRNGVASEGLEVFGSDGTKKRLPRALVSKPVPADGPKGARSPPSTGAAAPSSAXXVRSTXXXXXXXXXXXXXXXXXXTGALP-VPTALQQXXXXXXXXXXXXXXXXXXXPRSAEDGEATLSIEEDSSADGKAVKXXXXXXXXXXXXXXSDHAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASXXXXXXXXXXXXXXXXXRGGYSGRXXXXXXXXXXXXRKGASLLEDYHASKGPSNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQEEDSSEDEEEVEERVVP--VGRSNSGGVLISRAGEPKRLDAGRPSVCGASGGGAGAAGGPH---RXXXXXXXXXXXXXXXXXXXXXXXXXQLQKGGGGRGGGSQPHK 2451
            ISPQ ENAAKPPGKPK PLAARV PAA+VPATNGKTRA+ PPP+ARGSAP T         GKSRAG L FS RNGV S+GLEVFGSDGTKKRLPR L SKPVPADG KGA+SPPS         XX    XXXXXXXXXXXXXXXXXX    P VP A+QQXXXXXXXXXXXXXXXXXXX                         XXXXXXXXXXXX  SDHAVE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     AS     XXXXXXXXXXXX       XXXXXXXXXXXXRKGASLLEDYHASKGPSNKPKEMRWRTHRMVED+TN+ GKIMYGHVRTGPFGYNSVEGRFPMERPTTLGM+KAGMRRPTVIE+WSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWK+MFRAEQAILQAQE                  VGRS+SGGVL+SRAGEPKRLDAGR SVCGASG G GAAGGPH   R       XXXXXXXXXXXXXXXXX QL KGGGGRGGG QP K
Sbjct:    3 ISPQQENAAKPPGKPKSPLAARVVPAASVPATNGKTRAKAPPPLARGSAPVTAAAAAAGE-GKSRAGVLPFSGRNGVVSDGLEVFGSDGTKKRLPRVLASKPVPADGSKGAKSPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPVPIAVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXGDSDHAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG---ASGSSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGASLLEDYHASKGPSNKPKEMRWRTHRMVEDYTNVCGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGMRRPTVIERWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKSMFRAEQAILQAQEXXXXXXXXXXXXXXXXXXVGRSSSGGVLVSRAGEPKRLDAGRSSVCGASGSGTGAAGGPHQQHRGAGKKGSXXXXXXXXXXXXXXXXXQQLHKGGGGRGGGGQPQK 627
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBC3_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.010e-38
Identity = 70/129 (54.26%), Postives = 95/129 (73.64%), Query Frame = 1 
Query: 1738 SKGPSNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAE 2124
            SK  + + KE RWR HR  ED+ +LVG IMY     G FGYNS +G +P+ERP TLG++ + +RRPTVIEKWSPY+VA FE A++++GKVFH V + ++ K+  ++VEFYY+WKKT+HYK+WK     E
Sbjct:  232 SKRNNTQIKEYRWRAHRAAEDYISLVGDIMYPGTYFGAFGYNSDKGNYPVERPNTLGLLTSPLRRPTVIEKWSPYEVASFEAALTLYGKVFHSVQKVVKTKSTKEIVEFYYVWKKTSHYKRWKQQHEPE 360
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZH30_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.830e-38
Identity = 74/164 (45.12%), Postives = 107/164 (65.24%), Query Frame = 1 
Query: 1771 RWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQEEDSSEDEEEVEERVVPVGRS----NSGGVLISRAGEPK 2250
            RWRT +M ED+  +V ++MY  ++ GPFGY+ ++GRFP+ER   LG +   +RRP+VIE+WSPY++A FEGAI++ GK FHKV   +E KT  +VVEFYY+WKKT HY  WK ++  E   ++  +++   D E VE +    GR     ++GGV      +PK
Sbjct:   66 RWRTTQMAEDYMEMVSRLMYPPIQIGPFGYDPLKGRFPVERLHALGYITNPLRRPSVIERWSPYEIAKFEGAIALFGKHFHKVQRAVESKTTKEVVEFYYVWKKTAHYDHWKRIYEPEMIPVEDGDDEEKGDTEVVEPKQATTGRDAQSKDAGGVGGKGKRKPK 229
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RT22_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.130e-36
Identity = 59/129 (45.74%), Postives = 89/129 (68.99%), Query Frame = 1 
Query: 1738 SKGPSNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAE 2124
            S G   +  E RWR H+M +D+  L G IMY     GP+ Y    G++P+ER TTLG++    RRP+ IEKWSPY++A+FE ++S++GKVFHKV + +  KT  +++EFYY+WKK++HY++WK  +  +
Sbjct:  106 SHGEEEQGAEQRWRAHQMADDYITLAGNIMYPSTYLGPYAYTHTHGQYPIERLTTLGLLTNPCRRPSPIEKWSPYEIAMFEASLSLYGKVFHKVQKIVRSKTTKEIIEFYYIWKKSSHYRRWKGQYEVD 234
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK57_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.280e-35
Identity = 62/126 (49.21%), Postives = 92/126 (73.02%), Query Frame = 1 
Query: 1729 YHASKGPSNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWK 2106
            +HA    S K  + RWR H + ED+ N++G+IMY     GP+GY++  GRFP+E+ ++LG +   +R+PTVIEKWSP +VA+FE A++++GK FH V + ++ K+  +V+EFYY WKKTNHYK+WK
Sbjct:   58 HHAHLQSSGKNND-RWRPHGITEDYVNIIGEIMYPKQTFGPYGYDAENGRFPVEKMSSLGWLLCPLRKPTVIEKWSPIEVAVFEAAMTLYGKNFHTVQKYVKTKSTQEVIEFYYDWKKTNHYKEWK 182
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFW2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 4.330e-35
Identity = 63/129 (48.84%), Postives = 95/129 (73.64%), Query Frame = 1 
Query: 1750 SNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAIL 2136
            S+KPK  RWR H+M ED+TNLVG +MY   +   +GYN  E  +P+E+ + LG MK+ +RRPTVIEKWSPY++ +FEG++  +GK F  V+++I  KT  +V++FYY+WKKT HYK+WK  + +++ ++
Sbjct:  176 SDKPKA-RWRVHQMAEDYTNLVGSMMYPATQFHSYGYNPQEREYPIEKISLLGFMKSPLRRPTVIEKWSPYEIGIFEGSMLHYGKDFRNVSKQIGTKTTQEVIDFYYIWKKTAHYKRWKEQYISDEELI 303
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: SANT (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U6_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.720e-35
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 1 
Query: 1771 RWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQEE 2151
            RWRTHRMV+D  NL G  MY  V  GP+GY    G + +ER   L M++  +RRP+ +E+WSP +VA FEGA+ ++GK FHK+A E+  KT    +EFYY+WK T HYKQWK +F     + +A+ E
Sbjct:   18 RWRTHRMVDDLVNLCGNSMYPQVSMGPYGYRPEAGSYALERAAMLSMIQHPLRRPSAVEQWSPLEVAKFEGAMCIYGKQFHKIAAEVGTKTCQQAIEFYYVWKLTGHYKQWKKVFYGTAWVQRAEAE 144
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: SANT (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXF5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 4.450e-34
Identity = 63/126 (50.00%), Postives = 87/126 (69.05%), Query Frame = 1 
Query: 1738 SKGPSNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMF 2115
            S G   KP E RWR  RM ED+ NLVG +MY  V  GP+GY+  +G  P+ERP TLG++    RR TV+E WSP++VA FEGAI + GK F+++++ +  K+  + +EFYY+WK T+HY+QWK  F
Sbjct:   87 SGGGKGKPVE-RWRAQRMAEDYVNLVGDLMYPKVSFGPYGYDMAKGEIPLERPNTLGVLMCPARRRTVMEHWSPFEVACFEGAIVLVGKNFYEISKLLPSKSTKECIEFYYVWKMTSHYQQWKRSF 211
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BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Match: SANT (domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6P5_9STRA)

HSP 1 Score: 144 bits (362), Expect = 6.100e-34
Identity = 64/138 (46.38%), Postives = 101/138 (73.19%), Query Frame = 1 
Query: 1723 EDYHASKGPSNKPKEMRWRTHRMVEDFTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEKWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAIL 2136
            ED   SK P+ KP E RWR H+M ED+T LVG++MY   +   +GY+ +  ++PME+ + L  +++ +RRPT+IEKWSPY++A+FEG++  +GK F +V+++I  KT  +V++FYY+WKKT HYK+WK  F +++ +L
Sbjct:  203 EDAEDSKPPA-KPNE-RWRVHQMAEDYTTLVGRMMYPVTQFNNYGYDPLMRQYPMEKISLLSFIQSPLRRPTIIEKWSPYEIAVFEGSLFHYGKEFREVSKQIGTKTTREVIDFYYIWKKTGHYKKWKEQFISDEDLL 338
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9757.17752.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
SANT2.170e-20872.51domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
SANT1.970e-13978.73domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical1.010e-3854.26protein n=1 Tax=Leptocylindrus aporus TaxID=139809... [more]
Hypothetical1.830e-3845.12protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical5.130e-3645.74protein n=2 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical2.280e-3549.21protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Hypothetical4.330e-3548.84protein n=1 Tax=Pseudo-nitzschia delicatissima Tax... [more]
SANT4.720e-3548.82domain-containing protein n=1 Tax=Tribonema minus ... [more]
SANT4.450e-3450.00domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
SANT6.100e-3446.38domain-containing protein n=1 Tax=Pseudo-nitzschia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9757contigE_fasciculatus_S2_contig9757:3..4010 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score444.5
Seed ortholog evalue1.1e-121
Seed eggNOG ortholog2880.D7FK88
Preferred nameRCOR3
Model size2454
KEGG koko:K11829
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000785,GO:0000981,GO:0000982,GO:0001067,GO:0001078,GO:0001227,GO:0002262,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003712,GO:0003714,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007221,GO:0007275,GO:0007596,GO:0007599,GO:0008134,GO:0008150,GO:0008152,GO:0008593,GO:0009611,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0019213,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031935,GO:0031937,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033558,GO:0034101,GO:0035065,GO:0035067,GO:0035601,GO:0036211,GO:0042060,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045652,GO:0045654,GO:0045747,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050793,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0051052,GO:0051054,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0060968,GO:0061085,GO:0061086,GO:0065007,GO:0065008,GO:0070013,GO:0070933,GO:0071704,GO:0071840,GO:0080090,GO:0090239,GO:0090241,GO:0090308,GO:0090309,GO:0097159,GO:0098732,GO:0140096,GO:0140110,GO:1901363,GO:1901564,GO:1901983,GO:1901984,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903708,GO:1905268,GO:1905269,GO:1990391,GO:2000026,GO:2000112,GO:2000113,GO:2000618,GO:2000619,GO:2000756,GO:2000757,GO:2001141,GO:2001251,GO:2001252
Exons2
EggNOG free text desc.transcription corepressor activity
EggNOG OGsKOG1194@1,KOG1194@2759
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-17_003180.1
Cds size2454
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842619.3101995-CDS-E_fasciculatus_S2_contig9757:2..4521696842619.3101995-CDS-E_fasciculatus_S2_contig9757:2..452Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9757 3..452 -
1696842619.3267994-CDS-E_fasciculatus_S2_contig9757:2006..40101696842619.3267994-CDS-E_fasciculatus_S2_contig9757:2006..4010Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9757 2007..4010 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9757.17752.1prot_E_fasciculatus_S2_contig9757.17752.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9757 3..4010 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9757.17752.1

>prot_E_fasciculatus_S2_contig9757.17752.1 ID=prot_E_fasciculatus_S2_contig9757.17752.1|Name=mRNA_E_fasciculatus_S2_contig9757.17752.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=818bp
MDSNGDDPTDMKVADIKEVAAPVAESSKVHQQGLAHRSPHPTTSPSSAKK
ATTTSPRAATPTSSDRKALVTPSEAAVGRSPTPPGDYMDVDGEGSGRGKT
TESGKGKAELGGRATTSGNNGGGAGRKPRGLVNGLAAAAEPSRVGAAKSP
ALADDKKSPRVVGGAADTKKEGSSSSSSSSSGGGAKNSSTNNKMMISPQE
NAAKPPGKPKFPLAARVGPAAAVPATNGKTRARTPPPIARGSAPATAPAA
AAAGAGKSRAGDLFSSRNGVASEGLEVFGSDGTKKRLPRALVSKPVPADG
PKGARSPPSTGAAAPSSAAAVRSTSRSSTPTNANNKTTANTNTGALPVPT
ALQQQQRGRASPTMSSSSSASSSPRSAEDGEATLSIEEDSSADGKAVKRR
RRSRAATPTSGDSDHAVEAPPPRSRRRTDSGGPDQAAPGGPSSPKSAASL
NGRSLLVSAAAATTPAVSASSSITLGGGGVRSSSGSSRGNGGGGGAGASG
MPPAKKRSRPSAKDNSAGGGGGGSSSSSGASGSSGNGSSSAAGRGGGGRG
GYSGRGRGRGRGRGRGRRKGASLLEDYHASKGPSNKPKEMRWRTHRMVED
FTNLVGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMMKAGMRRPTVIEK
WSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQ
WKAMFRAEQAILQAQEEDSSEDEEEVEERVVPVGRSNSGGVLISRAGEPK
RLDAGRPSVCGASGGGAGAAGGPHRGAGKKGSQPQGRGGASSQPQGRGGQ
QLQKGGGGRGGGSQPHKG
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mRNA from alignment at E_fasciculatus_S2_contig9757:3..4010-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9757.17752.1 ID=mRNA_E_fasciculatus_S2_contig9757.17752.1|Name=mRNA_E_fasciculatus_S2_contig9757.17752.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4008bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9757:3..4010- (Ectocarpus fasciculatus EfasUO2)
ATGGATTCCAACGGAGACGATCCCACGGACATGAAGGTGGCCGATATCAA
GGAGGTGGCGGCGCCAGTCGCCGAGTCATCAAAGGTTCATCAGCAGGGCT
TGGCGCACCGTTCTCCTCACCCAACAACATCACCATCATCAGCCAAGAAG
GCGACGACGACTTCCCCTCGGGCGGCAACGCCGACGTCCAGCGACCGCAA
AGCACTAGTAACACCATCAGAAGCAGCAGTGGGCCGTTCTCCCACGCCGC
CAGGGGACTACATGGACGTTGACGGCGAAGGCTCGGGCCGAGGCAAGACT
ACGGAATCGGGAAAAGGAAAGGCGGAATTGGGAGGACGAGCAACAACAAG
CGGTAACAACGGAGGGGGGGCGGGCAGGAAGCCGAGGGGGTTAGTGAACG
GATTGGCGGCGGCGGCGGAGCCATCCCGGGTTGGCGCGGCCAAGTCGCCG
GCACTCGCGGACGACAAGAAAAGCCCGCGAGTTGTCGGGGGTGCCGCCGA
CACCAAGAAGGAGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCG
GCGCGAAAAACAGCTCGACAAACAACAAGATGATGATCTCGCCGCAAGAA
AACGCCGCCAAGCCGCCAGGAAAACCCAAGTTCCCTCTAGCAGCAAGGGT
CGGCCCGGCCGCGGCTGTGCCCGCCACCAACGGCAAGACCAGGGCAAGGA
CGCCACCACCGATTGCCCGCGGCTCTGCTCCTGCTACTGCTCCTGCTGCT
GCAGCAGCCGGAGCGGGGAAGAGCCGCGCGGGGGATCTTTTTTCGAGTCG
CAATGGAGTTGCTAGCGAGGGGCTCGAGGTATTCGGGTCGGACGGGACCA
AGAAACGCTTGCCGCGTGCACTTGTATCCAAGCCAGTGCCGGCGGATGGC
CCGAAGGGCGCCAGGAGCCCACCAAGCACTGGCGCGGCGGCTCCTTCCAG
TGCTGCTGCGGTACGGTCGACCAGCCGCAGCTCAACACCGACCAACGCCA
ACAACAAGACAACCGCCAACACCAACACGGGCGCATTGCCGGTGCCTACT
GCCCTTCAGCAGCAGCAAAGGGGGCGCGCGTCTCCGACCATGAGCTCCTC
CTCTTCCGCATCGTCCTCGCCAAGATCGGCAGAGGACGGCGAGGCCACGC
TCTCGATCGAGGAAGATAGCAGCGCCGATGGCAAAGCCGTCAAGCGACGT
CGCCGTTCCCGCGCGGCAACTCCGACGAGCGGGGACTCCGATCACGCCGT
GGAGGCGCCGCCGCCCCGCTCTCGCCGCCGCACCGACAGCGGCGGCCCCG
ATCAAGCAGCGCCGGGAGGACCATCCTCACCGAAATCAGCGGCATCTCTC
AACGGCCGCTCTCTTCTCGTGTCCGCCGCCGCGGCAACGACGCCCGCCGT
CTCCGCTTCCTCCTCTATAACGCTTGGTGGCGGCGGCGTCAGAAGCAGCA
GCGGCAGCAGCAGAGGGAATGGCGGCGGGGGAGGAGCAGGAGCATCAGGC
ATGCCGCCGGCGAAGAAGCGCAGCCGTCCAAGCGCTAAAGATAACAGCGC
AGGTGGGGGCGGCGGCGGCAGCAGCAGCAGTTCTGGGGCGAGCGGTAGTA
GTGGTAACGGCAGCAGCTCGGCAGCAGGGCGCGGCGGCGGCGGGCGCGGA
GGCTATTCCGGGAGGGGAAGAGGCAGGGGCAGAGGCAGAGGCCGGGGGCG
GCGAAAAGGGGCCTCGCTCTTGGAGGACTACCATGCGTCGAAGGGGCCGA
GCAACAAGCCGAAGGAGATGCGGTGGCGGACGCACCGCATGGTGGAGGAC
TTCACAAACTTGGTCGGGAAAATAATGTACGGGCACGTGAGAACCGGTCC
GTTCGGGTACAACTCGGTGGAGGGGCGGTTCCCGATGGAGCGGCCGACGA
CCCTGGGCATGATGAAGGCGGGGATGCGGCGGCCGACCGTGATCGAGAAG
TGGAGCCCGTACGACGTTGCGCTGTTCGAGGGGGCGATCAGCGTTCACGG
GAAGGTGGGTTTAGTGGATGGCGTTTTGGCAAGGGGGGGGAGGGGGGGGG
GGCGTGCGTGGGGACGACGACGCTCGGTTGGGCGTCGGTTNNNNNNNNNN
GGGGGGGGGGGGGGGGGGTGGGGGGGGTGGGGGGGGGGGGGGTGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCTGCGTGTGGACGAC
GACCCTATGTTGTGCGTATTTTTGTCGTCGGTGGTTTCATGCTCTCTCCC
CTGCGTAGAGTCTTGGTTCTTGCGATGGTTGGCAACAGATGGTTTTTGTG
GGGCGGCGTGGCGAGAGTATCCGATACATCTTGTCGGCATGCCATGCCGT
CTTGCTCGAGCTCTGTGCAAAGGATTTCACCGACAATCTCTTCCTTTGCA
GTCATTCATGGTTTGTGTGCGTCTTGTCGCCTCATGACATAGTTGGCGCA
AACCTGTTGGCTCCATATGTGTTTTCCGTAGGTCACATGATGAAAGATAT
CACGCCCCTTGGGCCGATATTCAAAGATCGAATTGTCCACAGAAGAAAGC
GTGGCGGTGCGAACAATGGCTGCGTTAGAACCGTCATCTCATCGAGAGCC
TTTTTTTTTTTTATCTTGGCATCCTTTTCGTCGTGGGGCAGTCGAAATTT
ATATCTCGGGCCGGGGGGTGTGATGTCTTGTGTCACGAACGGAAAATCGA
GGCCAGGTCTGCCTTCTCTGACAACGGAAAGGCGTCTCTTTCCCTACTAG
ACCAACTTTGCAACTGGCTCTCTCTCCGCGACGAGATTGGACACCACGTG
ACACGATAGTGGCATGTTCGCAAACACACGAGTTCCGTGTTTTGATCCTT
CGATGTTGCCTACATGCACAAATACACAGAAAACACGGATACCGTGGGGG
GAGGTGTTCGCCCCGTGTAAACCGGTATACTGTGTCGTCATAGATCGCGG
TTTCTTGGTGCTGGTCTGGTTCTAGTTTGTGTGGCGACGGCACACGATTT
ACATTCTCGTTCTGGTAATACTCCACAGCAACAAAGAGTGGTGGTGTCGA
AGTCGAAACTGGCGGCGATGGAACGGGCTCGTCGAGAGAGAGAGATCTCC
GAAGACGTGCTGTTCGTTTCTGTACACATGCTTTTTGTCGTGGATTACTC
GAGCTTTGAAAGTGGGTGCAGGGGGTGTGGTATCTAATGTCACCTACGGT
ATGTGACCATTGAAAGATAACTACTTTGCAACGCTCCAGACACGAGATCC
CCCATGAAGCAAGAAACGTTCTGTTTGCCGACTCCACCGTCCCAAAGAAC
CGCGCGCCTTCCTTCCTTGGCTTAGCCTTGATTCCGCCGCTCCTGCGTGC
CCTGCGTTCTTAATCTTGCCTCAATTGCACCGCATTTTTTTCATTTGTCC
TCAAATCCTCGCGGCCTGCCTTCCTTGGCTTAGCCTTGATTCCGCCGCTC
CTGCGCGCCCTGCGCGCTTAATCTTGCCTCATCAGCGCCGCATTTTTTTC
ATGTGTCCTCAAATCCTCGCGTGTTTTTGCTCTCTGTGGCAACGACGTTC
CCCGACAGGTTTTCCACAAGGTGGCGGAGGAGATAGAGGGGAAGACGGTG
GCCGACGTGGTGGAGTTCTACTACATGTGGAAGAAGACCAACCACTACAA
GCAGTGGAAGGCCATGTTCCGGGCGGAGCAAGCCATCCTCCAGGCCCAAG
AAGAAGATAGCAGCGAGGATGAGGAGGAGGTGGAGGAGAGAGTAGTACCG
GTGGGGCGCAGCAACAGCGGCGGCGTCCTCATCAGCAGGGCGGGCGAACC
GAAACGGCTAGACGCGGGCAGACCCTCCGTTTGCGGCGCCTCTGGGGGTG
GCGCTGGGGCGGCCGGGGGACCGCACCGGGGGGCAGGCAAGAAGGGTAGC
CAGCCGCAGGGCCGAGGGGGCGCAAGCAGTCAGCCGCAAGGGCGGGGCGG
CCAGCAGCTCCAGAAGGGCGGGGGGGGCAGGGGGGGAGGTAGCCAACCGC
ATAAGGGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9757:3..4010-

>mRNA_E_fasciculatus_S2_contig9757.17752.1 ID=mRNA_E_fasciculatus_S2_contig9757.17752.1|Name=mRNA_E_fasciculatus_S2_contig9757.17752.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2454bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9757:3..4010- (Ectocarpus fasciculatus EfasUO2)
ATGGATTCCAACGGAGACGATCCCACGGACATGAAGGTGGCCGATATCAA
GGAGGTGGCGGCGCCAGTCGCCGAGTCATCAAAGGTTCATCAGCAGGGCT
TGGCGCACCGTTCTCCTCACCCAACAACATCACCATCATCAGCCAAGAAG
GCGACGACGACTTCCCCTCGGGCGGCAACGCCGACGTCCAGCGACCGCAA
AGCACTAGTAACACCATCAGAAGCAGCAGTGGGCCGTTCTCCCACGCCGC
CAGGGGACTACATGGACGTTGACGGCGAAGGCTCGGGCCGAGGCAAGACT
ACGGAATCGGGAAAAGGAAAGGCGGAATTGGGAGGACGAGCAACAACAAG
CGGTAACAACGGAGGGGGGGCGGGCAGGAAGCCGAGGGGGTTAGTGAACG
GATTGGCGGCGGCGGCGGAGCCATCCCGGGTTGGCGCGGCCAAGTCGCCG
GCACTCGCGGACGACAAGAAAAGCCCGCGAGTTGTCGGGGGTGCCGCCGA
CACCAAGAAGGAGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCG
GCGCGAAAAACAGCTCGACAAACAACAAGATGATGATCTCGCCGCAAGAA
AACGCCGCCAAGCCGCCAGGAAAACCCAAGTTCCCTCTAGCAGCAAGGGT
CGGCCCGGCCGCGGCTGTGCCCGCCACCAACGGCAAGACCAGGGCAAGGA
CGCCACCACCGATTGCCCGCGGCTCTGCTCCTGCTACTGCTCCTGCTGCT
GCAGCAGCCGGAGCGGGGAAGAGCCGCGCGGGGGATCTTTTTTCGAGTCG
CAATGGAGTTGCTAGCGAGGGGCTCGAGGTATTCGGGTCGGACGGGACCA
AGAAACGCTTGCCGCGTGCACTTGTATCCAAGCCAGTGCCGGCGGATGGC
CCGAAGGGCGCCAGGAGCCCACCAAGCACTGGCGCGGCGGCTCCTTCCAG
TGCTGCTGCGGTACGGTCGACCAGCCGCAGCTCAACACCGACCAACGCCA
ACAACAAGACAACCGCCAACACCAACACGGGCGCATTGCCGGTGCCTACT
GCCCTTCAGCAGCAGCAAAGGGGGCGCGCGTCTCCGACCATGAGCTCCTC
CTCTTCCGCATCGTCCTCGCCAAGATCGGCAGAGGACGGCGAGGCCACGC
TCTCGATCGAGGAAGATAGCAGCGCCGATGGCAAAGCCGTCAAGCGACGT
CGCCGTTCCCGCGCGGCAACTCCGACGAGCGGGGACTCCGATCACGCCGT
GGAGGCGCCGCCGCCCCGCTCTCGCCGCCGCACCGACAGCGGCGGCCCCG
ATCAAGCAGCGCCGGGAGGACCATCCTCACCGAAATCAGCGGCATCTCTC
AACGGCCGCTCTCTTCTCGTGTCCGCCGCCGCGGCAACGACGCCCGCCGT
CTCCGCTTCCTCCTCTATAACGCTTGGTGGCGGCGGCGTCAGAAGCAGCA
GCGGCAGCAGCAGAGGGAATGGCGGCGGGGGAGGAGCAGGAGCATCAGGC
ATGCCGCCGGCGAAGAAGCGCAGCCGTCCAAGCGCTAAAGATAACAGCGC
AGGTGGGGGCGGCGGCGGCAGCAGCAGCAGTTCTGGGGCGAGCGGTAGTA
GTGGTAACGGCAGCAGCTCGGCAGCAGGGCGCGGCGGCGGCGGGCGCGGA
GGCTATTCCGGGAGGGGAAGAGGCAGGGGCAGAGGCAGAGGCCGGGGGCG
GCGAAAAGGGGCCTCGCTCTTGGAGGACTACCATGCGTCGAAGGGGCCGA
GCAACAAGCCGAAGGAGATGCGGTGGCGGACGCACCGCATGGTGGAGGAC
TTCACAAACTTGGTCGGGAAAATAATGTACGGGCACGTGAGAACCGGTCC
GTTCGGGTACAACTCGGTGGAGGGGCGGTTCCCGATGGAGCGGCCGACGA
CCCTGGGCATGATGAAGGCGGGGATGCGGCGGCCGACCGTGATCGAGAAG
TGGAGCCCGTACGACGTTGCGCTGTTCGAGGGGGCGATCAGCGTTCACGG
GAAGGTTTTCCACAAGGTGGCGGAGGAGATAGAGGGGAAGACGGTGGCCG
ACGTGGTGGAGTTCTACTACATGTGGAAGAAGACCAACCACTACAAGCAG
TGGAAGGCCATGTTCCGGGCGGAGCAAGCCATCCTCCAGGCCCAAGAAGA
AGATAGCAGCGAGGATGAGGAGGAGGTGGAGGAGAGAGTAGTACCGGTGG
GGCGCAGCAACAGCGGCGGCGTCCTCATCAGCAGGGCGGGCGAACCGAAA
CGGCTAGACGCGGGCAGACCCTCCGTTTGCGGCGCCTCTGGGGGTGGCGC
TGGGGCGGCCGGGGGACCGCACCGGGGGGCAGGCAAGAAGGGTAGCCAGC
CGCAGGGCCGAGGGGGCGCAAGCAGTCAGCCGCAAGGGCGGGGCGGCCAG
CAGCTCCAGAAGGGCGGGGGGGGCAGGGGGGGAGGTAGCCAACCGCATAA
GGGC
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