mRNA_E_fasciculatus_S2_contig9725.17726.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: PPM-type (phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L355_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.880e-49 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 2
Query: 29 MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS
Sbjct: 1 MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 82
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Putative (serine/threonine phosphatase 2C ptc2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP4_ECTSI) HSP 1 Score: 135 bits (339), Expect = 1.000e-36 Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 2
Query: 2 REGAQDADAMEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQR 214
REGA DADAMEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQR
Sbjct: 263 REGALDADAMEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQR 333
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C4_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 8.320e-21 Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 2
Query: 59 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
L+TAEPE L+SE+TP+DEF++LACDG+FDVL +EEV+ + +MK H DAQR E L+ AI +RRTRDNV+
Sbjct: 63 LVTAEPEILISELTPEDEFVLLACDGLFDVLGNEEVIDLIKTEMKQHGDAQRAVEMLSHVAIHKRRTRDNVT 134
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Phosphatase (2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.970e-20 Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 2
Query: 17 DADAMEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
DAD ++ A L+ +EPEF V ++TP ++F+VLACDG+FDV ++ EVV V +M +H DAQ+CCE +T +AI ER TRDNV+
Sbjct: 489 DADGLDSTSGGCAPLVISEPEFTVVQLTPAEDFMVLACDGLFDVFSNVEVVQAVCAEMAVHGDAQKCCESITLRAIRERHTRDNVT 574
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: PPM-type (phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 8.460e-19 Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 2
Query: 59 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
LITAEPE L ITP+DEF++LACDG+FDV TS+EVV V +++++H D QR CE L +AI ER T+DNVS
Sbjct: 1168 LITAEPEMLSCRITPEDEFVLLACDGLFDVFTSDEVVRIVRKELRMHGDTQRVCETLVRRAINERYTQDNVS 1239
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX31_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.200e-16 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 2
Query: 59 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
++TAEPE ++ P+DEF+VLACDG+FDV T+EEVV V +M H DAQ+C E L+ +AI ER RDNV+
Sbjct: 669 ILTAEPEIQSLKLAPEDEFIVLACDGLFDVFTNEEVVQAVRAEMAQHQDAQQCVESLSRRAIHERNCRDNVT 740
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Hypothetical (protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEJ1_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 5.010e-15 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 2
Query: 59 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
LI A+P+ + I+ D+FL+LACDG+FDV T E++V V M+ H D+QRCC++LT +AI +R +RDNVS
Sbjct: 534 LIVADPDIQATNISENDQFLLLACDGLFDVFTPEDIVTFVKSNMEEHHDSQRCCQNLTYEAIRKRNSRDNVS 605
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCC2_HETAK) HSP 1 Score: 74.7 bits (182), Expect = 2.420e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 2
Query: 59 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
LIT EPE L ++TP+D F++LACDG+FDV +EE VA V ++M H +A R CE L+ +A+ ER +RDN++
Sbjct: 151 LITCEPEILEYDLTPEDHFILLACDGLFDVFENEEAVALVLQEMAGHRNAHRACEALSRRAL-ERGSRDNIT 221
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Protein (phosphatase 1b2 53 kDa isoform n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U755_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 6.210e-14 Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = 2
Query: 50 YAQ-LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVS 274
Y+Q L+ A PE L++E++ +D+F++LACDG+FDV + EV+ + E MK H DAQR CE+++ AI +R DNVS
Sbjct: 918 YSQPLVIARPEILITELSERDDFVLLACDGLFDVFPNSEVIRFILEDMKQHHDAQRACENISYTAIHQRIAHDNVS 993
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2DMW7_9DINO) HSP 1 Score: 72.4 bits (176), Expect = 7.340e-14 Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 2
Query: 59 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKI----HADAQRCCEDLTEKAIVERRTRDNVS 274
L+ AEPE V ++TPQDEFL +ACDG+FDV +S+E V +Y ++ D +R ED+ +AI +RR+RDNV+
Sbjct: 89 LVIAEPEIRVEQLTPQDEFLFMACDGLFDVFSSQEAVDFIYARLAAMPQNEQDPKRAVEDIVHEAIHDRRSRDNVT 164 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9725.17726.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9725.17726.1 >prot_E_fasciculatus_S2_contig9725.17726.1 ID=prot_E_fasciculatus_S2_contig9725.17726.1|Name=mRNA_E_fasciculatus_S2_contig9725.17726.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=82bp MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVback to top mRNA from alignment at E_fasciculatus_S2_contig9725:4511..5693- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9725.17726.1 ID=mRNA_E_fasciculatus_S2_contig9725.17726.1|Name=mRNA_E_fasciculatus_S2_contig9725.17726.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1183bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9725:4511..5693- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9725:4511..5693- >mRNA_E_fasciculatus_S2_contig9725.17726.1 ID=mRNA_E_fasciculatus_S2_contig9725.17726.1|Name=mRNA_E_fasciculatus_S2_contig9725.17726.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=246bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9725:4511..5693- (Ectocarpus fasciculatus EfasUO2)back to top |