mRNA_E_fasciculatus_S2_contig9708.17713.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: SpoU_methylase (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L234_9PHAE) HSP 1 Score: 275 bits (704), Expect = 2.820e-88 Identity = 140/156 (89.74%), Postives = 146/156 (93.59%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQMLVDS 501
+VPNIAGLARTSEIFAATKLVVPDLRV+K+PAFTKISTGAEQWLP+EEVGEEQLVAWLRRVKKRRAG GGHVLVG+EQTNNSICLTK+ FHRHL YTLVLGRENSGLPLDVI EMD CCQIPQQGVLRSLNAHVSGAIILAEYSRQMLVDS
Sbjct: 347 KVPNIAGLARTSEIFAATKLVVPDLRVMKSPAFTKISTGAEQWLPVEEVGEEQLVAWLRRVKKRRAG--GGGHVLVGIEQTNNSICLTKIK---FHRHLAYTLVLGRENSGLPLDVIGEMDVCCQIPQQGVLRSLNAHVSGAIILAEYSRQMLVDS 497
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GN51_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.020e-38 Identity = 72/156 (46.15%), Postives = 104/156 (66.67%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQMLVDS 501
++PN+AGLART+EIFAA KL+VPDLRV K F IS GA +W+ IEE E L+ WL + K+ + +VG+EQT++S C++ Y F + L+LG+E G+P++ + +D C +IPQ G++RSLN HVSGAI + EYS+Q +V +
Sbjct: 17 KIPNLAGLARTAEIFAAQKLIVPDLRVQKMDNFKSISVGANEWITIEECPERDLLDWLLKRKEEC-------YTIVGIEQTSSSGCISD---YKFPKKTV--LLLGKEREGIPIEFLHVVDVCVEIPQLGIIRSLNVHVSGAISIWEYSKQQMVKN 160
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: SpoU_methylase (domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U9Y0_VOLCA) HSP 1 Score: 137 bits (344), Expect = 4.130e-38 Identity = 75/152 (49.34%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQM 489
++PN+AGLART E+ A +LV+ DL ++P FT +S AEQWLP+EEV L+AWL +RRA EG + LVG+EQT S+ L + LVLGRE G+P +V++ +DA +IPQ+G++RSLN HVSGAI L EY RQM
Sbjct: 10 KLPNLAGLARTCEVMGAGRLVLADLAATRDPVFTSVSVTAEQWLPMEEVKPAALLAWL----ERRAAEG---YTLVGLEQTAQSVRLPD-----YRWPAKVVLVLGREKEGIPPEVLSLLDATLEIPQRGIIRSLNVHVSGAIALYEYVRQM 149
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1C3_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.600e-36 Identity = 73/153 (47.71%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQML 492
+VPN+AGLART+EIFAA +LVVPD V K F IS AE+W+ IEE E L++WL + K+ G+ +VGVEQT++SICL+ H L+LG+E G+P++ ++ +D C +IPQ G++RSLN HVSGA+ + EYS+QM+
Sbjct: 1419 KVPNLAGLARTAEIFAADRLVVPDQSVRKMDNFKSISVSAEEWIRIEECKERDLLSWLNKRKQE-------GYTIVGVEQTSSSICLSS-----HHFDRKTVLLLGKEKEGIPVEFLSVVDVCVEIPQLGIIRSLNVHVSGALTIWEYSKQMM 1559
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V1J9_9CHLO) HSP 1 Score: 134 bits (336), Expect = 3.100e-36 Identity = 77/151 (50.99%), Postives = 99/151 (65.56%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQ 486
++PN+AGLART E+F A+ L VPDLRV +PAF IS AEQW+ + EV E L+ WL R + A G+ L+G+EQT S L + Y F R LVLGRE GLP +V++ +DA +IPQ G++RSLN HVSGAI L EY+RQ
Sbjct: 68 KLPNLAGLARTCEVFRASALAVPDLRVASDPAFASISVTAEQWVNMVEVKEGALLPWLLRKQ-------AEGYALLGLEQTAESARLHE---YEFPRRCV--LVLGREKEGLPAEVLSLLDATLEIPQLGLIRSLNVHVSGAIALYEYTRQ 206
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZWU9_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.570e-36 Identity = 66/153 (43.14%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQML 492
+VPN+AGLART+EIFAA +LV+PD V K F +S A W+ IEE E+ L++WL+ ++ G+ +VG+EQT++S C++K + L+LG+E G+P++ + +DAC +IPQ G++RSLN HV+GAI + EY++QM+
Sbjct: 51 KVPNLAGLARTAEIFAADRLVIPDTSVCKMDIFKSVSVSAGDWITIEECKEDGLLSWLKHQREN-------GYKIVGLEQTSSSSCISKTEFTG-----KTVLLLGKEKEGIPVEFLQVVDACVEIPQLGIVRSLNVHVTGAIAIWEYTKQMM 191
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: tRNA/rRNA (methyltransferase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQ52_9STRA) HSP 1 Score: 131 bits (330), Expect = 5.090e-36 Identity = 72/152 (47.37%), Postives = 101/152 (66.45%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYT-LVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQ 486
++PN+AGLARTSEIFAA LV+PDL V K F IS GA W+ IEEV EQL++WL + K A G+ +VG+EQT++S L ++ F ++ T L+LG+E G+P+ + +D C +IPQ G++RSLN HVSGAI + E +R+
Sbjct: 13 KIPNLAGLARTSEIFAAKSLVIPDLSVTKMDNFKSISVGAADWINIEEVKIEQLLSWLLKKK-------AEGYWIVGLEQTSSSSPLHEINIPTFAQNNNKTVLLLGKEKEGIPVQFLQTVDTCIEIPQFGMIRSLNVHVSGAITIWELTRK 157
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: SpoU_methylase (domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRC1_SELML) HSP 1 Score: 131 bits (329), Expect = 1.530e-35 Identity = 70/153 (45.75%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQML 492
++PN+AGLART E+F A+ L V D ++L++ F IS AEQW+PI EV E L+ +L R+K G+ ++G+EQT NS+ + Y F + LVLGRE G+P+++I +DAC +IPQ G++RSLN HVSGAI + EY++Q L
Sbjct: 40 RIPNLAGLARTCEVFKASALTVADKKILEDRQFKLISVTAEQWVPILEVKEGALIRYLERMKDE-------GYAVLGLEQTANSVAVNN---YSFPSRVV--LVLGREKDGIPVNLIQTLDACLEIPQLGMIRSLNVHVSGAIAVWEYTKQHL 180
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: tRNA/rRNA (methyltransferase SpoU family protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PR13_TRIPR) HSP 1 Score: 129 bits (325), Expect = 5.170e-35 Identity = 71/154 (46.10%), Postives = 103/154 (66.88%), Query Frame = 1
Query: 25 LLLQVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQ 486
LL ++PN+AGLART E+F A+ L + D ++K+ F IS AE+W+PI EV + + +L++ K++ G ++G+EQT NS+ L + Y F + + LVLGRE G+P+D+I +DAC +IPQ GV+RSLN HVSGAI L EY+RQ
Sbjct: 35 LLDRIPNLAGLARTCEVFKASGLAIADTNIIKDKQFQLISVTAEKWVPIIEVPVDSIKTYLQKKKRQ-------GFSILGLEQTANSVPLDQ---YVFPKKMV--LVLGREKEGIPVDIIHILDACVEIPQFGVVRSLNVHVSGAIALWEYTRQ 176
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Match: Hypothetical (protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RYK0_9STRA) HSP 1 Score: 139 bits (349), Expect = 6.430e-35 Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 1
Query: 34 QVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGAEQWLPIEEVGEEQLVAWLRRVKKRRAGEGAGGHVLVGVEQTNNSICLTKVCYYCFHRHLTYTLVLGRENSGLPLDVIAEMDACCQIPQQGVLRSLNAHVSGAIILAEYSRQMLVD 498
+VPN+AGLART+EIFAA +L++PD+ V K F IS GA +W+ IEE E+ L++WL + K+ G+ +VG+EQT++S CL+K+ + L+LG+E G+P++ + +D C +IPQ G++RSLN HVSGAI + EY++QM+
Sbjct: 1017 KVPNLAGLARTAEIFAADRLIIPDVGVCKMDNFKSISVGAGEWIKIEECKEKDLLSWLNQRKEE-------GYNIVGIEQTSSSQCLSKLEFGA-----KTVLLLGKEKEGIPVEFLQVVDVCVEIPQLGIIRSLNVHVSGAISIWEYTKQMMAQ 1159 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9708.17713.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9708.17713.1 >prot_E_fasciculatus_S2_contig9708.17713.1 ID=prot_E_fasciculatus_S2_contig9708.17713.1|Name=mRNA_E_fasciculatus_S2_contig9708.17713.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=168bp NLLLLLVLLLLQVPNIAGLARTSEIFAATKLVVPDLRVLKNPAFTKISTGback to top mRNA from alignment at E_fasciculatus_S2_contig9708:761..1902+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9708.17713.1 ID=mRNA_E_fasciculatus_S2_contig9708.17713.1|Name=mRNA_E_fasciculatus_S2_contig9708.17713.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1142bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9708:761..1902+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9708:761..1902+ >mRNA_E_fasciculatus_S2_contig9708.17713.1 ID=mRNA_E_fasciculatus_S2_contig9708.17713.1|Name=mRNA_E_fasciculatus_S2_contig9708.17713.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=504bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9708:761..1902+ (Ectocarpus fasciculatus EfasUO2)back to top |