mRNA_E_fasciculatus_S2_contig9693.17693.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9J7_ECTSI) HSP 1 Score: 444 bits (1141), Expect = 3.440e-150 Identity = 244/291 (83.85%), Postives = 249/291 (85.57%), Query Frame = 2
Query: 302 RAVKWCYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRLEECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGYCTGRRGRGRDGGGQAARALVSGSGGDSGDASSVGDMELAEYGGLVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXKGDLYAAPEAEAGLRSSAEWSLEERLAAMPEADSGSEGEFR 1174
RA+KWCYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFAL+IELVV+VLIGDDRR EECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGG+DGQKCRCHWVLPLPARFPEGDAAARIFGYCTGRRGRGRDGGGQ RAL SG GGD XXXXXXXXXXXXXXXXKGDLYA PEAEAGLR SAE SL ER+AAMPEAD GSEGEFR
Sbjct: 176 RALKWCYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALMIELVVMVLIGDDRRSEECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGMDGQKCRCHWVLPLPARFPEGDAAARIFGYCTGRRGRGRDGGGQ-TRALASG-GGD--------------------------------XXXXXXXXXXXXXXXXKGDLYATPEAEAGLRHSAERSLGERVAAMPEADCGSEGEFR 432
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ75_9STRA) HSP 1 Score: 196 bits (499), Expect = 7.000e-55 Identity = 97/178 (54.49%), Postives = 126/178 (70.79%), Query Frame = 2
Query: 311 KWCYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRL-EECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDS----VDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
+WC +CDA+KP RAHHCS+C RCI+KMDHHCPWVNNCVG+GN KLFLLF YT LC+ ++ I LV V++ D +RL ++C+++PSD A +++ I+++FGLFT CM DQC + TKIDRLKGE H S V G NEV+GG + Q CR HW+ P PA +P A A + GY
Sbjct: 146 RWCRRCDAYKPLRAHHCSICARCIIKMDHHCPWVNNCVGLGNHKLFLLFIGYTAVLCILSIGI-LVYKVVLEDAKRLPKQCQMTPSDQLAAMSVGIIALLFGLFTTCMLLDQCSSLESGLTKIDRLKGETHASHGRTVALGVNEVWGGEE-QWCRWHWLCPWPASWPAA-AHALLNGY 320
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVR7_9STRA) HSP 1 Score: 179 bits (453), Expect = 2.660e-47 Identity = 92/180 (51.11%), Postives = 114/180 (63.33%), Query Frame = 2
Query: 302 RAVKWCYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRLEECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHD-SVDGG---ANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
R K+C +C+AFKP RAHHCS+C+RC+VKMDHHCPWVNNCVGIGN KLFLLF Y +C +AL + LV + E C + + V L +++FGLFTCCM DQ V STN T IDRLKG+ H S G NEVFGG +G++ R HW+ P A FP G + + GY
Sbjct: 146 RVRKFCRRCNAFKPPRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKLFLLFIFYVFIMCTYALTLVLVRYAGCIGEEDAEGCD-DMAGNLLVVFLVMEAVLFGLFTCCMMLDQWTVVSTNTTAIDRLKGQYHAVSTSVGRADVNEVFGGKEGRRIRWHWLWPSAAHFP-GSVLSDLLGY 323
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXN1_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.060e-42 Identity = 83/171 (48.54%), Postives = 107/171 (62.57%), Query Frame = 2
Query: 317 CYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRLEECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
C +C +KPARAHHCS+C+RC+VKMDHHCPWVNNCVG+GN K FLLF Y L +A+ V+VV+ E C + + H + L S++FGLFT CM CDQ V +T T+IDRLKGE +++ G EVFGG+ K HW LP+ FPE ++ GY
Sbjct: 120 CRRCKIYKPARAHHCSICERCVVKMDHHCPWVNNCVGLGNHKFFLLFVFYVFLLATYAM----VLVVIRYSHCMNETCATTGAVHVICLCLE--SVLFGLFTMCMMCDQYSVITTGTTQIDRLKGETSENL--GIREVFGGMS-NKISLHWFLPVNIAFPE-SVKEQLLGY 280
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU2_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.460e-42 Identity = 89/186 (47.85%), Postives = 116/186 (62.37%), Query Frame = 2
Query: 305 AVKWCYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIE----LVVVVLIGDDRRLEECRLSPSDHAA-------TVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
A +WC++CDA+KP RAHHCS+C+RCIVKMDHHCPW+NNCVGIGN K FL F YT LC +AL++ L V ++G L SD + L A +++FG+FT CMA DQ +V S+ QT+IDRLKGE H + +EVFGG G++CR W+LP F DA + G+
Sbjct: 133 ARRWCHRCDAYKPERAHHCSVCRRCIVKMDHHCPWMNNCVGIGNHKFFLQFIGYTFLLCGYALVLIVFRFLTCVGVLGS--------LPGSDFGTCLEGSGMVLILVAEAVLFGMFTFCMALDQWEVLSSGQTQIDRLKGEQH-ATSADVHEVFGG--GKRCRVDWLLPTRPVFCA-DAWEEVMGH 306
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R7W7_SAPDV) HSP 1 Score: 160 bits (406), Expect = 1.110e-41 Identity = 83/171 (48.54%), Postives = 107/171 (62.57%), Query Frame = 2
Query: 317 CYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRLEECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
C +C +KPARAHHCS+C+RC+VKMDHHCPWVNNCVG+GN K FLLF Y L ++A+ +VV E C + + H + L A+ +FGLFT CM CDQ V +T T+IDRLKGE +++ G EVFGGV+ K HW LP+ FPE ++ GY
Sbjct: 120 CRRCKIYKPARAHHCSICERCVVKMDHHCPWVNNCVGLGNHKFFLLFIFYVFLLSLYAM----ALVVARYSHCMHETCASTGAVHVICLCLEAV--LFGLFTMCMMCDQYSVITTGTTQIDRLKGETSENL--GIREVFGGVN-NKIALHWFLPVNIWFPE-SIKEQLLGY 280
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2B0_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.960e-41 Identity = 81/171 (47.37%), Postives = 104/171 (60.82%), Query Frame = 2
Query: 317 CYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRLEECRLSPSDHAATVALTAISIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
C +C FKPARAHHCS+C+RC++KMDHHCPWVNNCVG+GN K FLLF Y L ++AL + DD C + H + + A+ +FGLFT CM CDQ V +T T+IDRLKGE +++ G EVFGG K HW+LP+ FPE ++ GY
Sbjct: 118 CRRCKIFKPARAHHCSICERCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFVLAIYALSLVFTRYAHCIDDT----CASNGLMHVVCLCMEAV--LFGLFTMCMMCDQYSVITTGTTQIDRLKGETSENL--GVREVFGGSS-SKPSLHWLLPVNISFPE-SIKEQLLGY 278
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKJ1_GLOUD) HSP 1 Score: 158 bits (399), Expect = 1.130e-40 Identity = 84/173 (48.55%), Postives = 106/173 (61.27%), Query Frame = 2
Query: 317 CYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFAL-LIELVVVVLIGDDRRLEECRLSPSDHAATVALTAI-SIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
C +C FKP RAHHCS+C RC++KMDHHCPWVNNCVG+GN K FLLF Y L ++AL L+ L I D+ PS A V + +++FGLFT CM CDQ V +T T+IDRLKGEV D++ G EVFGG ++ HW+LP+ FP +I GY
Sbjct: 119 CRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFILSLYALVLVSLRYARCINDN--------CPSSGAIRVVFLVLEAVLFGLFTMCMMCDQYSVITTGATQIDRLKGEVTDNL--GIREVFGGAS-RRFSLHWLLPVNIWFPT-SLKNQILGY 279
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE7_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.590e-40 Identity = 86/196 (43.88%), Postives = 110/196 (56.12%), Query Frame = 2
Query: 311 KWCYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRLEECRLSPSDHAATVALTAI---------------------SIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGV--DGQKCRCHWVLPLPARFPEGDAAARIFGY 829
++C KC+A+KP RAHHCS+C+RC+VKMDHHCPWVNNCVGIGN K F+ F +Y + V+ALL L + + C SP+ A V L +++FGLFT CM CDQ +V STNQT+IDRLKGE H NE+FGG +G + R + LP FP D + GY
Sbjct: 32 RFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVFVISVYALL--LAGWRFCACLKNIGACHYSPAKDMAVVFLVVEVDGHDYLLVLAESAPRVFHMEAMLFGLFTMCMVCDQWEVVSTNQTQIDRLKGETHSQPALEINELFGGSSRNGGRFRLDFFLPTRVSFPA-DIWEEVMGY 224
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBN5_9STRA) HSP 1 Score: 156 bits (394), Expect = 6.070e-40 Identity = 86/173 (49.71%), Postives = 108/173 (62.43%), Query Frame = 2
Query: 317 CYKCDAFKPARAHHCSLCQRCIVKMDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRLEE-CRLSPSDHAATVALTAI-SIMFGLFTCCMACDQCQVASTNQTKIDRLKGEVHDSVDGGANEVFGGVDGQKCRCHWVLPLPARFPEGDAAARIFGY 829
C +C FKP RAHHCS+C RC++KMDHHCPWVNNCVG+GN K FLLF Y L ++AL V+V + R + E C PS A V + + +++FGLFT CM CDQ V +T T+IDRLKGEV DS+ G EVFGG Q +W+LP+ FP +I GY
Sbjct: 121 CRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFVLSLYAL-----VLVSLRYARCVNENC---PSHGAFRVMMLVLEAVLFGLFTLCMMCDQYSVITTGATQIDRLKGEVGDSL--GVREVFGGAS-QGFSLNWLLPVSIWFPT-SLKNQILGY 281 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9693.17693.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9693.17693.1 >prot_E_fasciculatus_S2_contig9693.17693.1 ID=prot_E_fasciculatus_S2_contig9693.17693.1|Name=mRNA_E_fasciculatus_S2_contig9693.17693.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=263bp MDHHCPWVNNCVGIGNQKLFLLFCAYTCALCVFALLIELVVVVLIGDDRRback to top mRNA from alignment at E_fasciculatus_S2_contig9693:6..3235+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9693.17693.1 ID=mRNA_E_fasciculatus_S2_contig9693.17693.1|Name=mRNA_E_fasciculatus_S2_contig9693.17693.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3230bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9693:6..3235+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9693:6..3235+ >mRNA_E_fasciculatus_S2_contig9693.17693.1 ID=mRNA_E_fasciculatus_S2_contig9693.17693.1|Name=mRNA_E_fasciculatus_S2_contig9693.17693.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=789bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9693:6..3235+ (Ectocarpus fasciculatus EfasUO2)back to top |