mRNA_E_fasciculatus_S2_contig9692.17692.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Centrin ((Fragment) n=1 Tax=Acetabularia acetabulum TaxID=35845 RepID=Q8S325_ACEAT) HSP 1 Score: 173 bits (439), Expect = 5.750e-54 Identity = 89/105 (84.76%), Postives = 99/105 (94.29%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T G+IDAKELKVAMRALGFEPKKEEIKKMI+DIDKDGSGTIDF+EFL MMT+KM E+DSREEI+KAFRLFDDDETGKISF+NLKRVAKELG+NMTDEELQ ++
Sbjct: 7 TDGSGSIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLSMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGQNMTDEELQEMI 111
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3FY13_9SPIT) HSP 1 Score: 165 bits (418), Expect = 9.700e-51 Identity = 84/105 (80.00%), Postives = 96/105 (91.43%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T GTIDAKELKVAMRALGFEPKKEEI+KMI+D D+DGSG IDF EFL+MMT KM+E+D REE+LKAFRLFDDDETGKISF+NLKRVAKELGENMTD+E+Q ++
Sbjct: 3 TDGSGTIDAKELKVAMRALGFEPKKEEIRKMIADADRDGSGVIDFPEFLDMMTQKMAERDPREEMLKAFRLFDDDETGKISFKNLKRVAKELGENMTDDEIQEMI 107
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Uncharacterized (protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DY01_9FUNG) HSP 1 Score: 166 bits (421), Expect = 2.770e-50 Identity = 84/105 (80.00%), Postives = 97/105 (92.38%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T GTID KELKVAMRALGFEPKKEE+KKMI+++D+ GSG IDF +FLE+MTSKMSEKDSREEI+KAFRLFDDD+TGKISF+NLKRVAKELGEN+TDEELQ ++
Sbjct: 54 TDGSGTIDTKELKVAMRALGFEPKKEELKKMIAEVDRSGSGVIDFNDFLELMTSKMSEKDSREEIVKAFRLFDDDDTGKISFKNLKRVAKELGENLTDEELQEMI 158
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Non-specific (serine/threonine protein kinase n=50 Tax=Eukaryota TaxID=2759 RepID=W7AXP4_PLAVN) HSP 1 Score: 164 bits (416), Expect = 9.700e-50 Identity = 83/105 (79.05%), Postives = 97/105 (92.38%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T G IDAKELKVAMRALGFEPKKE+I+K+ISD+DKDGSGTIDF +FL++MT KMSE+D +EEILKAFRLFDDDETGKISF+NLKRVAKELGEN+TDEE+Q ++
Sbjct: 38 TNGTGRIDAKELKVAMRALGFEPKKEDIRKIISDVDKDGSGTIDFNDFLDIMTIKMSERDPKEEILKAFRLFDDDETGKISFKNLKRVAKELGENITDEEIQEMI 142
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Caltractin-like (n=2 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A672NHP6_SINGR) HSP 1 Score: 163 bits (413), Expect = 2.160e-49 Identity = 87/105 (82.86%), Postives = 93/105 (88.57%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T G ID KELKVAMRALGFEPKKEEIKKMI+DIDK+GSG I F +FL MMT KMSEKDS+EEILKAFRLFDDD TGKISF+NLKRVAKELGEN+TDEELQV L
Sbjct: 41 TDGSGNIDVKELKVAMRALGFEPKKEEIKKMIADIDKEGSGVIGFNDFLSMMTQKMSEKDSKEEILKAFRLFDDDCTGKISFKNLKRVAKELGENLTDEELQVRL 145
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Centrin-1 (n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HUF0_SPIPD) HSP 1 Score: 162 bits (410), Expect = 8.690e-49 Identity = 80/105 (76.19%), Postives = 98/105 (93.33%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T GTID KELKVAMRALGFEPKK+E+K+MI+++D+ GSG+IDF +FLE+MT+KM+EKD+REEI+KAFRLFDDDETGKISF+NLKRVAKELGEN+TDEELQ ++
Sbjct: 41 TDGSGTIDTKELKVAMRALGFEPKKDELKRMIAEVDRTGSGSIDFNDFLELMTAKMAEKDTREEIIKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 145
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Uncharacterized (protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LN86_9CHLO) HSP 1 Score: 161 bits (407), Expect = 1.070e-48 Identity = 81/105 (77.14%), Postives = 96/105 (91.43%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T GTID +ELKVAMRALGFEPKKEEI+K+++D+DKDGSG +D++EFL +MTSKM E+DSREEILKAFRLFDDDETGKIS +NLKRVAKELGEN+TDEELQ ++
Sbjct: 14 TDGSGTIDIRELKVAMRALGFEPKKEEIRKLMTDLDKDGSGVMDYEEFLSVMTSKMGERDSREEILKAFRLFDDDETGKISLKNLKRVAKELGENITDEELQEMI 118
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Uncharacterized (protein n=4 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GEX2_SALFA) HSP 1 Score: 161 bits (408), Expect = 1.750e-48 Identity = 84/105 (80.00%), Postives = 94/105 (89.52%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T G ID KELKVAMRALGFEPKKEEIKKMISD+DK+ SGTIDF +FL +MT KMSEKDS+EEILKAFRLFDDD TGKISF+NLKRVAKELGEN+TDEEL+ ++
Sbjct: 41 TDGRGAIDVKELKVAMRALGFEPKKEEIKKMISDLDKENSGTIDFDDFLSIMTQKMSEKDSKEEILKAFRLFDDDCTGKISFKNLKRVAKELGENLTDEELEEMI 145
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: Centrin (4 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1DDF6_CYPCA) HSP 1 Score: 162 bits (411), Expect = 2.460e-48 Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T G ID KELKVAMRALGFEPKKEEIKKMI+DIDK+GSG I F +FL MMT KMSEKDS+EEILKAF+LFDDD TGKISF+NLKRVAKELGEN+TDEELQV L
Sbjct: 98 TDGSGNIDVKELKVAMRALGFEPKKEEIKKMIADIDKEGSGVISFNDFLSMMTQKMSEKDSKEEILKAFKLFDDDCTGKISFKNLKRVAKELGENLTDEELQVRL 202
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Match: LOW (QUALITY PROTEIN: caltractin-like n=2 Tax=Crassostrea TaxID=6564 RepID=A0A8B8DBH5_CRAVI) HSP 1 Score: 161 bits (407), Expect = 2.560e-48 Identity = 83/105 (79.05%), Postives = 95/105 (90.48%), Query Frame = 1
Query: 10 TQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQVLL 324
T GTIDAKELKVAMRALGFEPKKEEIKKMI+DIDK+GSGTID+ +F +MT KMSEKD +EEI KAFRLFDDD+TGKISF+NLKRV+KELGEN+TDEELQ ++
Sbjct: 42 TMXSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKEGSGTIDYNDFQNIMTQKMSEKDLKEEIQKAFRLFDDDDTGKISFKNLKRVSKELGENLTDEELQEMI 146 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9692.17692.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9692.17692.1 >prot_E_fasciculatus_S2_contig9692.17692.1 ID=prot_E_fasciculatus_S2_contig9692.17692.1|Name=mRNA_E_fasciculatus_S2_contig9692.17692.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=120bp MDKTQNVGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEback to top mRNA from alignment at E_fasciculatus_S2_contig9692:3999..4879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9692.17692.1 ID=mRNA_E_fasciculatus_S2_contig9692.17692.1|Name=mRNA_E_fasciculatus_S2_contig9692.17692.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=881bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9692:3999..4879- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9692:3999..4879- >mRNA_E_fasciculatus_S2_contig9692.17692.1 ID=mRNA_E_fasciculatus_S2_contig9692.17692.1|Name=mRNA_E_fasciculatus_S2_contig9692.17692.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=360bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9692:3999..4879- (Ectocarpus fasciculatus EfasUO2)back to top |