mRNA_E_fasciculatus_S2_contig9686.17686.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9686.17686.1
Unique NamemRNA_E_fasciculatus_S2_contig9686.17686.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE)

HSP 1 Score: 572 bits (1473), Expect = 4.340e-196
Identity = 331/382 (86.65%), Postives = 342/382 (89.53%), Query Frame = 1
Query:  232 KTGGEWMWARDSSPSSGLMRVLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELP------SLPPMWSLFIPPNASSVGIYGDTVPDRPDGGADAGGEAXXXXXXXXXXANDGGGSRGEGQEHRIPRARGAAERGGARXXXXXXXXXLARTEQERRPLVGGDRDGEDDGGA-----GEEIEMTPRRRNGNGGGAGERAEG 1344
            KTGGEWMW+RDS PSSGLMRVLSAVAFKSQVVVRSLMAF+LMSTVTALTVRTLLSSGVVI+FP+VMLLERMGLQGVD+QQMLALSYPWLGLPIEHLRNRNKPVGPFIMGH+MQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMF+VKLYVLQAIELPAYTSGEVSQDAPRAHFVELP      +LPPMWSLFIPPNASSVG+YGD VPDRPDGG       XXXXXXXXX +NDG GSRGEGQEHRIPR RGAA  GGA XXXXXXXX LARTEQERRPLVGGDRD            GEEIEM PRR NG G GA E A+G
Sbjct:  382 KTGGEWMWSRDSDPSSGLMRVLSAVAFKSQVVVRSLMAFLLMSTVTALTVRTLLSSGVVIIFPVVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHVMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFSVKLYVLQAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDAVPDRPDGGXXXXXXXXXXXXXXXXESNDGEGSRGEGQEHRIPRTRGAAVGGGAXXXXXXXXXGLARTEQERRPLVGGDRDXXXXXXXXXXXXGEEIEMVPRRLNGTGSGAEESAQG 763          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 2.030e-150
Identity = 290/402 (72.14%), Postives = 301/402 (74.88%), Query Frame = 1
Query:  202 GVGRTPPLSEKTGGEWMWARDSSPSSGLMRVLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYH-------FQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELP------SLPPMWSLFIPPNASSVGIYGDTVPDRPDGGADAGGEAXXXXXXXXXXANDGGGSRGEGQEHRIPRARGAAERGGARXXXXXXXXXLARTEQERRPLVGGDRDGEDDGGA--------GEEIEMTPRRRNGNGGGAGERAEG 1344
            G  RTPPLS+KTGGEWMW+RD  PSSGLMRVLSAVAFKSQV+VRSL+AFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVD+QQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ    G       F       RSS      T++ S        +        FQ GF G        G F       +AIELPAYTSGEVSQDAPRAHFVELP      +LPPMWSLFIPPNASSVG+YGD VPDRPDGG DA    XXXXXXXXX ANDG GSRGEGQEHRIPRARGAAERGGAR XXXXXXXXLARTEQERR LVGGDR                GEEIEM PRRRN     AGERAEG
Sbjct:    8 GDDRTPPLSKKTGGEWMWSRDPDPSSGLMRVLSAVAFKSQVLVRSLVAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQGGSTGWGSSTNTF-------RSSFWGGGPTSSSSPGRPRCPSWRSPCTSTTFQRGFSGWGRGPPSPGWFPFSSTWWKAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDAVPDRPDGGGDAXXXXXXXXXXXXXEANDGEGSRGEGQEHRIPRARGAAERGGARAXXXXXXXXLARTEQERRLLVGGDRXXXXXXXXXXXXXXXXGEEIEMAPRRRNXXXXXAGERAEG 402          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK)

HSP 1 Score: 237 bits (604), Expect = 2.610e-71
Identity = 127/270 (47.04%), Postives = 173/270 (64.07%), Query Frame = 1
Query:  217 PPLSEKTGGEWMWARDSSPSSGLMRVLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELP------SLPPMWSLFIPPNASSVGIYGD 1008
            PP    T  EW W +   P +G    L  +A K   ++ SL+AF LMS+VTAL VR L+SSGVV MFP+   LER GL+G + Q++L LSYPWLG P+E L+ R KP GPF+ GH++++VV+Y +Y A  +AW+ WLYGK+    L+VWL+G +ML+EY+ ++F+R+R   +FF R   L FV +H+YFY F  G+F L A + F  M    L+ LQ +E PA   GEVS  APRA + ELP       L P W+LF+PP  +  G+Y D
Sbjct:   29 PPGRPSTKEEWSWGKGELPPAGGYSPLLRLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFN-QRLLRLSYPWLGAPMEELQRRGKPTGPFVAGHLLKVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVYDD 297          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK)

HSP 1 Score: 234 bits (597), Expect = 4.930e-68
Identity = 124/261 (47.51%), Postives = 170/261 (65.13%), Query Frame = 1
Query:  244 EWMWARDSSPSSGLMRVLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELP------SLPPMWSLFIPPNASSVGIYGD 1008
            EW W +   P +G    L  +A K   ++ SL+AF LMS+VTAL VR L+SSGVV MFP+   LER GL+G + Q++L LSYPWLG P+E L+ R KP GPF+ GH++++VV+Y +Y A  +AW+ WLYGK+    L+VWL+G +ML+EY+ ++F+R+R   +FF R   L FV +H+YFY F  G+F L A + F  M    L+ LQ +E PA   GEVS  APRA + ELP       L P W+LF+PP  +  G+Y D
Sbjct:  226 EWSWGKGELPPAGGYSPLLRLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFN-QRLLRLSYPWLGAPMEELQRRGKPTGPFVAGHLLKVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVYDD 485          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.870e-66
Identity = 120/238 (50.42%), Postives = 165/238 (69.33%), Query Frame = 1
Query:  331 RSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELP------SLPPMWSLFIPPNASSVGIYGDTVPDRP 1026
            R+L+ F ++S+VTAL VR LLSSGV  MFP   LL RMG   +D  ++LA SYPW+G P++ LR +NKP GPFIM H++Q+VV+YT+YNA  +AW+ WLY K+    L++ L+GM++L+EY+ L+FVR+ + I FF R   L F A+H+YF+   MG+FGLAA S+FL +    LY +  +E+PA T GE+S + PRA FVELP      SLPP W+LF+P N    G+Y +  P RP
Sbjct:   15 RALLTFAVLSSVTALVVRMLLSSGVAAMFPFFALLRRMGFTDLD-DRVLAASYPWIGRPMQALRRQNKPTGPFIMAHLVQVVVYYTLYNAVQVAWTMWLYDKS--AQLEMSLFGMMLLWEYYCLVFVRSAAGIAFFPRVTMLYFTAYHMYFFMNPMGYFGLAALSTFLLVLHAMLYTVTDLEVPALTRGEISAEHPRACFVELPWPSWGASLPPTWTLFLPTNTRVRGVYENIRPSRP 249          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.590e-59
Identity = 117/263 (44.49%), Postives = 172/263 (65.40%), Query Frame = 1
Query:  247 WMWARDSSPSSGLMR---VLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELP------SLPPMWSLFIPPNASSVGIYGD 1008
            W W  +S+ + G      VL  +  K+ VV+RSL+AF   STVTAL VR L+SSGVVIMFP++  L  +G   +D+Q +L +SYPWLGLP+E LR +NKPV P I+ H++++VV Y++Y AC LAW  WLY K + + L++W+YG+VM++EY+++I++R+ ++I F  R   + F+AFH Y Y    GF+ +A  + FL M    ++ L  +E+PA +  EVS D PRA +  LP       LPP W+LF+P N+ +  IY D
Sbjct:   30 WSWT-ESTLALGYQNKRGVLEYLKAKAIVVLRSLLAFFFTSTVTALIVRMLISSGVVIMFPLLTGLRYLGCSAIDMQ-ILNMSYPWLGLPVERLRAQNKPVTPLIVAHMVRVVVLYSMYEACQLAWGIWLYDKPLPSGLELWIYGIVMIWEYYSMIYLRSAAAIYFLPRFTLVYFIAFHFYLYGTAYGFYPVALLTMFLAMCHSLVFCLTRLEVPASSRLEVSFDQPRALYTALPWTAWSAMLPPSWTLFLPLNSRAQNIYDD 290          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.120e-43
Identity = 92/248 (37.10%), Postives = 158/248 (63.71%), Query Frame = 1
Query:  241 GEWM-WARDSSPSSGLMRVLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELPSLPPMWSLFIPPN 981
            G++M W ++ + +     +   + F+  V+  S  +F ++ST++AL VR L+SSGVV++FP+  +++R    G+   ++++LSYPW+G+PIE LR+RN+ + PFI+ HI ++VV+Y +Y A  LA+S W Y  +     ++W++ ++ML EY+++I++R+R SI+ F R    +++ +H+Y Y    GF  LA    F+ M    ++ ++  ELPAY+SG VS DAPR     +P   PMWS+ I P+
Sbjct:  116 GDYMTWNKNDNKTINSKYISKYITFRLMVLFVSFFSFFMLSTISALLVRILISSGVVLLFPLFWIVQRFTSHGIS-WRIISLSYPWIGIPIEVLRSRNQSIEPFIIAHICRIVVYYVLYEAAQLAFSVWFYNDSRPGQKELWIFAIMMLLEYYSMIYLRSRGSIILFPRVILSTYMIYHIYVYLHPNGFHLLALLVMFMFMAWNMIFCVRKFELPAYSSGHVSIDAPRVLHNRVPW--PMWSIAIAPD 360          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.730e-42
Identity = 92/231 (39.83%), Postives = 140/231 (60.61%), Query Frame = 1
Query:  334 SLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVELPS------LPPMWSLFIPPNASSVGIYGD 1008
            S+++F L+S +TAL VR L++SGV I FP+  L +R+GL     +Q+L+LSYPWLG  IE L   N+   P +  H+  ++++YT+Y AC + WS+WLY K+M       ++G+VM+ EYF++IF R+  +I FF R     ++AFH+YFY    GF  +A  + +       +Y L+  E+ A+  G VS + PR+ + E+P       LPP+WS+F P N S   IY D
Sbjct:  261 SILSFALVSQITALLVRVLVTSGVAITFPLFNLFQRLGLNQ-HRRQLLSLSYPWLGAQIELLHTSNQSSNPLVSAHLFNVLLYYTMYEACQIVWSFWLYNKSMPAGQMQQIFGLVMICEYFSMIFARSLLTIQFFPRVMMFYYIAFHLYFYLVPYGFTSMATITWYAACLHAMVYCLRYHEVKAFQRGRVSFEQPRSLYSEIPQPQWNMLLPPLWSMFYPLNRSQRSIYDD 490          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9V5_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.190e-41
Identity = 107/287 (37.28%), Postives = 163/287 (56.79%), Query Frame = 1
Query:  232 KTGGEWMWARDSSPSSGLMRVLSAV--AFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVE--LP----SLPPMWSLFIP----------PNASSVGIYGDTVPDRPDGGA 1038
            +T   W W  +S P  G     S    + K   +++SL AF  +S  TA+ VR L++SGV +M+P    L R+G +G+ L  +LA SY WLG+P++ L+ R KP+ PF++ H+ +++V Y++Y AC + +   LY K+  + L   +YG+VML EY ++++VR+  SI +F R   L  +AFH+Y+Y    GF  L   +  L +    +YVL  +ELPA+ +  VS D PRA + +  LP    S+PP WSLF+P                G+Y + VPDRP  GA
Sbjct:  199 RTNETWSWRAESLPPPGGRPFFSLDNWSLKLSALLQSLSAFFFLSGTTAIVVRMLMTSGVALMYPCFFCLRRLGARGLSLG-VLARSYAWLGVPMQRLQARGKPLAPFLLAHLCKVLVLYSMYEACQVFFVETLYAKSGASGLPFAVYGLVMLLEYVSMLYVRSALSIKYFPRVVFLYLLAFHLYYYLVPFGFSSLLLLAISLLLLHSVIYVLLFLELPAFRASIVSYDTPRAFYTDTGLPAHPNSIPPSWSLFLPLTLGRRGDDGGRGGVGGVYEEEVPDRPRRGA 484          
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBT1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 5.710e-41
Identity = 106/287 (36.93%), Postives = 163/287 (56.79%), Query Frame = 1
Query:  232 KTGGEWMWARDS--SPSSGLMRVLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGEVSQDAPRAHFVE--LP----SLPPMWSLFIP----------PNASSVGIYGDTVPDRPDGGA 1038
            +T   W W  +S   P       L   + K   +++SL AF  +S  TA+ VR L++SGV +M+P    L R+G +G+ L  +LA SY WLG+P++ L+ R KP+ PF++ H+ +++V Y++Y AC + +   LY K+  + L   +YG+VML EY ++++VR+  SI +F R   L  +AFH+Y+Y    GF  L   +  L +    +YVL  +ELPA+ +  VS D PRA + +  LP    S+PP WSLF+P              + G+Y + VPDRP  GA
Sbjct:  273 RTNETWSWRAESLPPPRGRPFFSLDNWSLKLSALLQSLSAFFFLSGTTAIVVRMLMTSGVALMYPCFFCLRRLGARGLSLG-VLARSYAWLGVPMQRLQARGKPLAPFLLAHLCKVLVLYSMYEACQVFFVETLYAKSGASGLPFAVYGLVMLLEYVSMLYVRSALSIKYFPRVVFLYLLAFHLYYYLVPFGFSSLLLLAISLLLLHSVIYVLLFLELPAFRASIVSYDTPRAFYTDTGLPAHPNSIPPSWSLFLPLTLGRRGDDGGRGGAGGVYEEEVPDRPRRGA 558          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9686.17686.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized4.340e-19686.65protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.030e-15072.14protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical2.610e-7147.04protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical4.930e-6847.51protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Uncharacterized2.870e-6650.42protein (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
Hypothetical2.590e-5944.49protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Hypothetical5.120e-4337.10protein (Fragment) n=2 Tax=Chromulina nebulosa Tax... [more]
Hypothetical1.730e-4239.83protein n=1 Tax=labyrinthulid quahog parasite QPX ... [more]
Uncharacterized1.190e-4137.28protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Uncharacterized5.710e-4136.93protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9686contigE_fasciculatus_S2_contig9686:2072..5374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score166.0
Seed ortholog evalue4e-38
Seed eggNOG ortholog35128.Thaps20868
Preferred nameTMEM259
Model size1349
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0008150,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0010941,GO:0012505,GO:0019222,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0033554,GO:0034976,GO:0042176,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0060255,GO:0060548,GO:0061136,GO:0065007,GO:0080090,GO:0080134,GO:0080135,GO:1901214,GO:1901215,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1904292,GO:1904294,GO:1905897,GO:1905898
Exons5
EggNOG free text desc.positive regulation of ERAD pathway
EggNOG OGs2XG4I@2836,KOG2092@1,KOG2092@2759
Cds size1347
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842613.5542216-CDS-E_fasciculatus_S2_contig9686:2071..24751696842613.5542216-CDS-E_fasciculatus_S2_contig9686:2071..2475Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9686 2072..2475 -
1696842613.5661366-CDS-E_fasciculatus_S2_contig9686:2849..31351696842613.5661366-CDS-E_fasciculatus_S2_contig9686:2849..3135Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9686 2850..3135 -
1696842613.5764067-CDS-E_fasciculatus_S2_contig9686:3439..35261696842613.5764067-CDS-E_fasciculatus_S2_contig9686:3439..3526Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9686 3440..3526 -
1696842613.5868325-CDS-E_fasciculatus_S2_contig9686:4207..43091696842613.5868325-CDS-E_fasciculatus_S2_contig9686:4207..4309Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9686 4208..4309 -
1696842613.5970368-CDS-E_fasciculatus_S2_contig9686:4906..53741696842613.5970368-CDS-E_fasciculatus_S2_contig9686:4906..5374Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9686 4907..5374 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9686.17686.1prot_E_fasciculatus_S2_contig9686.17686.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9686 2072..5374 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9686.17686.1

>prot_E_fasciculatus_S2_contig9686.17686.1 ID=prot_E_fasciculatus_S2_contig9686.17686.1|Name=mRNA_E_fasciculatus_S2_contig9686.17686.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=449bp
PTPSVSHFFTTRLHHYPPLFLSSVWDASFYRHAPGGKRNGTEWNLNGTRT
GNPVWGGRYTGNGNDTPGVGRTPPLSEKTGGEWMWARDSSPSSGLMRVLS
AVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGL
QGVDLQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNA
CLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTA
ALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFAVKLYVLQAIELPAYTSGE
VSQDAPRAHFVELPSLPPMWSLFIPPNASSVGIYGDTVPDRPDGGADAGG
EAAAAAAVGGGQANDGGGSRGEGQEHRIPRARGAAERGGARARGRGRARG
LARTEQERRPLVGGDRDGEDDGGAGEEIEMTPRRRNGNGGGAGERAEG*
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mRNA from alignment at E_fasciculatus_S2_contig9686:2072..5374-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9686.17686.1 ID=mRNA_E_fasciculatus_S2_contig9686.17686.1|Name=mRNA_E_fasciculatus_S2_contig9686.17686.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3303bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9686:2072..5374- (Ectocarpus fasciculatus EfasUO2)
CCAACTCCCTCCGTCTCCCACTTCTTTACCACTCGCCTCCATCACTATCC ACCCTTGTTTTTGTCCTCTGTGTGGGATGCGTCATTCTATCGCCACGCGC CCGGCGGGAAACGGAATGGAACGGAATGGAACCTAAACGGAACCCGCACC GGTAATCCGGTCTGGGGGGGGCGGTATACCGGAAACGGAAACGACACCCC GGGGGTTGGTCGAACGCCGCCGCTATCCGAAAAGACGGGAGGAGAGTGGA TGTGGGCGAGGGACTCGAGCCCGTCTTCCGGGCTGATGAGAGTCCTCTCG GCGGTGGCCTTCAAGAGCCAGGTGGTTGTGCGGTCTCTGATGGCGTTCGT TCTCATGTCCACCGTCACGGCGCTGACCGTCAGGACGCTGCTCAGCTCCG GGGTGGTGATCATGTTCCCGATGGTGATGCTGCTGGAGCGGATGGGGCTC CAGGGCGTGGACTTGCAGGTGGCGTGGTGTCGGTGTTGTGGGCGGTGGCC TTCGGGTTGTTGTCAAATCAGGAGCAGTGTTGTTGTTGCTGTTGTTGTTT TTAGTTTTCGAGCCGGCTGAAGTGTGCTACGCTATGCGACTGGTGATGTA TTCGTGTTCTGCTGGAAGGGAAGGATGCGCGAGTGACACTCTCGAAAGAA TCAACGGCCGATGCTGAACACCACTCGCTGCGTGAAAGGACCGGTGATTA TGTCAAACGGCCGCATGTAGGTGGGTTGAAGGCACGCGCTGTGCGTGTGC GTTCGACCCTCGGTCGTGTTGGCAGAGAGCAGGGTCCGTAAGGCCAGGCG AGTCGCACGGACGACCGGTAGGCTGAGGGCGGTGTTTGCGTGAAGGGTGT CGGTTGACACGTGTTGGTGTGTGCACGGCATTTCGTCGAATGGCCCTTTG GTGGTGTGTATGTGTTTTCATGTCTTCTCAGACTCGGCAACCGGTGTGAA GGGATTCTTCCTTTTTATTCCCTCGGCGACCGCCGCTAATGTGGTCCGGC CTACCCCCCTTTTCACGTATACACCGCCACTCGCTCGCCTTGTCCTTGCT GCCGCGCGTCAACAGCAAATGCTGGCCCTGTCGTACCCGTGGCTGGGGTT GCCGATCGAACACCTGCGAAATCGCAACAAGCCGGTCGGGCCGTTCATCA TGGGTCATATCATGCAGGTGAAGCAGCGCTGTGAACCCTAGATAGGGATT CCTTGGGGTCAAGCATTTGTTAGTCACGTGTGCTCTCATGGGTGTGTCTT GTACTTGAGGGAATGGCAATGCGCAGCAAGGGTGCGATACGGTCTAGTAG CGGTTCTGCTCTTGGCGGACAGAGGGAGGAAGACGTTGCCCCGTTTGCTT GTGAGACATGTGCCCGTTGGCCCCTCTTTTACCGCCCATGGGGCAGTGTT GGGCAAACATTGAACACGTCACGGGCTGTATCTATCTCGTCCAACCGTGT CATTTATTGATATGCGCCACGGAGCCAGTGTGCGGTAAATAGTGGTCGTG AAGGTGCAATCAACGCTCCCCTCCAGAAACGCCTACCCCCCGATGGCGGA CGGCAGCACAATGCGAGACAGTTTTGTGTCCGCTTCCACCCGTCCGACCT GCGGCCATACCTTCACCAGAGATTTCTGGCGCCGTGGGAAAGACCTCCTG CGGCCCTTGCTTTGAGACACCTATGTAGACCAAGCTGCCGTGCCCGCCCG CACCTGCATTTGCTTTCTCGGCGGTGTGTCGTGTCGTGTTTTGTTTGTCC CTGTCTTTCCCCCCAATACCCGTTGAAACTTGTTTTGCGCTTTGGGTGAT GTGGCCCTCCCTCACCCTTGACGATGCTCAACCGCCCCCCCGTGTCAGAT GGTGGTGTTCTACACGGTGTACAACGCGTGCCTGTTGGCGTGGTCCTACT GGCTCTACGGCAAGACCATGACCACCTCTCTCCAGGTGTGTGAGCAACAA CAGGTTCGTGTGTGAGAGCGTGGGCTCGTTCAAGTATGTCAAGCGAGAAG GAAGACAGCGGTGGTCAGGTGGTGTGGTGGCGAGTACCCACCACGAAAGA AAGCGCTGTTTCGTTTCTCCCGTTCTAATTTCAACATTGTTGATCGGTAC ACCACATCGCGTGTAACAGAAAGCTCGTTTCTTCCGAAAATCGTATCCTT GCTTCCGCCGCCACCGCCGCCGCTGGGTGAGTTTTCTCTCTTGTTCCGGT ACACTTACTCTGCCCCCCCCCCCCCCCCCCCCCCCCCAGGTGTGGCTTTA CGGCATGGTGATGCTCTACGAGTACTTCGCGCTCATCTTTGTGCGGGCGC GGTCGAGTATCGTATTCTTCTCGAGGACGGCCGCGCTGTCCTTCGTGGCG TTCCACGTTTACTTCTACCACTTCCAGATGGGGTTCTTCGGGCTGGCGGC GTGGTCGTCCTTCCTCGGCATGTTCGCCGTCAAGCTCTACGTGCTGCAGG CGATCGAGCTGCCGGCCTACACCAGCGGAGAGGTTTCCCAGGACGCGCCG CGGGCGCACTTCGTCGAGCTTCCCTGTGAGTCGTTGTCGCCGTCACGCGG AAAGAGAGGCCCCGTGGAATGGAAACTGGTCGCCGATTTTTGTTGTCATT GGTCGTTGCGGAGTAGTACAGTAATGTACCCGGTGTTGGAGGCTTTGCGT ACGAAAAAAAGCTCTGTTCTCATGAGGCTGCGAAAATGAAGACGGTATGT ATGCATCTGCGTGTTTTGTATTTGGGCATCCTCTCTCTTCAGGATTGCAA TGGATACCTCACACCTGCATGCGTTTCTCCCCTACCCCCCCCCCCCCCGC CTCCTTGATGCGTGCCCCCCCTCGTCCTTTTTGCGCCTTGGACGTCTGTT CTACACCGACAACGACAACGACAACCGAAAGGGCCAACTTGGGGTGCAGC GTTGCCACCGATGTGGTCCCTCTTCATCCCGCCCAATGCCTCCTCCGTCG GAATCTACGGCGATACCGTTCCCGATCGGCCGGACGGGGGGGCTGATGCG GGGGGGGAAGCAGCAGCAGCAGCAGCAGTAGGTGGGGGGCAAGCAAACGA CGGCGGGGGGAGCAGGGGAGAGGGGCAAGAACATAGGATTCCCCGAGCTC GCGGCGCTGCCGAGAGAGGCGGAGCCCGAGCTAGGGGGCGGGGGCGGGCT AGAGGGCTCGCGCGAACGGAGCAGGAGAGAAGGCCGTTGGTCGGCGGGGA CAGAGATGGCGAGGACGACGGCGGCGCCGGGGAGGAGATTGAGATGACGC CTCGGAGACGGAACGGTAACGGCGGTGGAGCGGGGGAGAGGGCCGAAGGT TGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9686:2072..5374-

>mRNA_E_fasciculatus_S2_contig9686.17686.1 ID=mRNA_E_fasciculatus_S2_contig9686.17686.1|Name=mRNA_E_fasciculatus_S2_contig9686.17686.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1347bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9686:2072..5374- (Ectocarpus fasciculatus EfasUO2)
CCAACTCCCTCCGTCTCCCACTTCTTTACCACTCGCCTCCATCACTATCC
ACCCTTGTTTTTGTCCTCTGTGTGGGATGCGTCATTCTATCGCCACGCGC
CCGGCGGGAAACGGAATGGAACGGAATGGAACCTAAACGGAACCCGCACC
GGTAATCCGGTCTGGGGGGGGCGGTATACCGGAAACGGAAACGACACCCC
GGGGGTTGGTCGAACGCCGCCGCTATCCGAAAAGACGGGAGGAGAGTGGA
TGTGGGCGAGGGACTCGAGCCCGTCTTCCGGGCTGATGAGAGTCCTCTCG
GCGGTGGCCTTCAAGAGCCAGGTGGTTGTGCGGTCTCTGATGGCGTTCGT
TCTCATGTCCACCGTCACGGCGCTGACCGTCAGGACGCTGCTCAGCTCCG
GGGTGGTGATCATGTTCCCGATGGTGATGCTGCTGGAGCGGATGGGGCTC
CAGGGCGTGGACTTGCAGCAAATGCTGGCCCTGTCGTACCCGTGGCTGGG
GTTGCCGATCGAACACCTGCGAAATCGCAACAAGCCGGTCGGGCCGTTCA
TCATGGGTCATATCATGCAGATGGTGGTGTTCTACACGGTGTACAACGCG
TGCCTGTTGGCGTGGTCCTACTGGCTCTACGGCAAGACCATGACCACCTC
TCTCCAGGTGTGGCTTTACGGCATGGTGATGCTCTACGAGTACTTCGCGC
TCATCTTTGTGCGGGCGCGGTCGAGTATCGTATTCTTCTCGAGGACGGCC
GCGCTGTCCTTCGTGGCGTTCCACGTTTACTTCTACCACTTCCAGATGGG
GTTCTTCGGGCTGGCGGCGTGGTCGTCCTTCCTCGGCATGTTCGCCGTCA
AGCTCTACGTGCTGCAGGCGATCGAGCTGCCGGCCTACACCAGCGGAGAG
GTTTCCCAGGACGCGCCGCGGGCGCACTTCGTCGAGCTTCCCTCGTTGCC
ACCGATGTGGTCCCTCTTCATCCCGCCCAATGCCTCCTCCGTCGGAATCT
ACGGCGATACCGTTCCCGATCGGCCGGACGGGGGGGCTGATGCGGGGGGG
GAAGCAGCAGCAGCAGCAGCAGTAGGTGGGGGGCAAGCAAACGACGGCGG
GGGGAGCAGGGGAGAGGGGCAAGAACATAGGATTCCCCGAGCTCGCGGCG
CTGCCGAGAGAGGCGGAGCCCGAGCTAGGGGGCGGGGGCGGGCTAGAGGG
CTCGCGCGAACGGAGCAGGAGAGAAGGCCGTTGGTCGGCGGGGACAGAGA
TGGCGAGGACGACGGCGGCGCCGGGGAGGAGATTGAGATGACGCCTCGGA
GACGGAACGGTAACGGCGGTGGAGCGGGGGAGAGGGCCGAAGGTTGA
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