mRNA_E_fasciculatus_S2_contig9677.17681.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Heat (shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN8_ECTSI) HSP 1 Score: 624 bits (1610), Expect = 1.390e-217 Identity = 370/401 (92.27%), Postives = 377/401 (94.01%), Query Frame = 1
Query: 1 NVQACLYLKDGGCKTVGGKAPLPAGVLIDRKTGVKGVRRWLKSRAGGGPASDAPAKGVKLFHAVGGXXXXXXXXXXXXXXXXXXADDKGAAVVWPLRLLALRGKGTEATQRVQSSLRHDIEVSPVESKEAADDQDDGDTSGVRVLLTSPDASEAKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEV 1203
+++ACLYLKDGGCKTVGGKAPLPAG+LIDRKTGVKGVRRWLKSRAGGG A APAKGVKLFHAVGGXXXXXXXXXXXXXXXXXX D GAAVVWPLRLLALRGKG EATQRVQSSLRHDIEVS VESKEA DDQ DGDTSGVRVLLTSPDA+E KDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLS PGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREA+PPSADSA XXXXXXXXXXXXXXXXXXX XXX QAE QGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGP+VASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEV
Sbjct: 94 SIKACLYLKDGGCKTVGGKAPLPAGILIDRKTGVKGVRRWLKSRAGGGQAPAAPAKGVKLFHAVGGXXXXXXXXXXXXXXXXXX-DGNGAAVVWPLRLLALRGKGAEATQRVQSSLRHDIEVSSVESKEATDDQGDGDTSGVRVLLTSPDAAETKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREASPPSADSAXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----QAEAQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPEVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEV 488
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Hsp70 (protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z170_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.060e-33 Identity = 126/404 (31.19%), Postives = 177/404 (43.81%), Query Frame = 1
Query: 10 ACLYLKDGGCKTVGGKAPLPAGVLIDRKTGVKGVRRWLKSRAGGGPASDAPAKGVKLFHAVGGXXXXXXXXXXXXXXXXXXADDKGAAVVWP--LRLLALRGKGTEATQRVQSSLRHDIEVSPVESKEAA--DDQDDGDTSGVRVLLTSPDASEAKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDD-LILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEVT 1206
ACLYL D G + G+APLPA + +D KTG +G+R+W K + G A G++ + + + P +RLL R + +L + PVE EAA DD D DTSGV + L E + E PE +LA LL ++ KA A V TCN +VP GD RVALQR+VFLAGM P RFV +PLAAAVG L +G D + AV +G +A + +T A GD+ GG DMDYL+ARAL AA+ED+ G + A + ++ L+ +A+ RE LS + +++V L G + P + + +V+
Sbjct: 87 ACLYLADKGAVPLTGRAPLPAALWLDPKTGARGLRKWAKRDSRSGALPKAVTVGLR-------------------------GEGEAGLLRVPAGMRLLGARHR--------PGALLREAAAWPVELVEAARGDDAAD-DTSGVHICLPGEAGQEWRACE----PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXA------AAGALETA------------------------------------------AVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEG--FKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVS 402
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Heat-shock (protein Hsp70 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Z8PAF5_9BACT) HSP 1 Score: 66.2 bits (160), Expect = 4.510e-8 Identity = 60/215 (27.91%), Postives = 85/215 (39.53%), Query Frame = 1
Query: 481 VTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLS 1125
VTP V +M+L+ +K AE+ G + ++VP D R A Q++ LAG+ R V P AAA+ Y G D+ L +G DVS++ P ME VRAS GD+A GG D+D L+ARA A + SD LW ++ +A+ + RLS
Sbjct: 82 VTPPMVSSMILSSLKQAAEQHLGHEVHQAVITVPAFFSDAQRSATQQAAELAGLEVLRLVNEPTAAAMAYARGNQR------DERWLVYDLGGGTFDVSIV-----------------------------------------------DCSPSVME--VRASHGDTALGGHDIDLLIARAAAADFAAQHDIQLESDPLLWPQVIAAAEAAKIRLS 241
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Chaperone (protein HscA homolog n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FWF0_9PROT) HSP 1 Score: 61.6 bits (148), Expect = 1.420e-6 Identity = 71/283 (25.09%), Postives = 113/283 (39.93%), Query Frame = 1
Query: 301 LRGKGTEATQRVQSSLRHDIEVSPVESKEAADDQDDGDTSGVRVLLTSPDASEAKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLA--AVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSS 1143
L G+G E + V +L +DIE S DG +R+ ++ ++P E+ A +L G+K +AEEA G ++ ++VP D R A + + LAG+ R V P AAA+ Y G +G + L +G DVSL+ TG ++VR++ GD+A GG D D+++A L+A +D S +V R L +A++++E LS S
Sbjct: 90 LMGRGAEDIKAVAGTLPYDIEPS------------DGGMVKLRIA------------DLTLSPVEISADILRGLKERAEEALGGEVRKAVITVPAYFDDAARTATRDAARLAGLEVLRLVNEPTAAALAY--GLD----EGAEGLYAIYDLGGGTFDVSLLR------------MQTGV-------------------------------------FQVRSTGGDAALGGDDFDHVIAERLMAERGTKDPSRAEV-------RTALTTARMIKEALSDQDSGS 286
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Chaperone (protein DnaK n=2 Tax=Parcubacteria group TaxID=1794811 RepID=A0A0G1FKD2_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 5.790e-6 Identity = 59/261 (22.61%), Postives = 102/261 (39.08%), Query Frame = 1
Query: 415 TSGVRVLLTSPDASEAKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSL 1197
+ GV V + P A + + W PEE+ AM+LA +KA AE G I+ ++VP D R + + + +AG+ R + P AAA+ Y R E I+ G DVS++ + V+++ GD+ GG D+D ++ L+ + + G D++ D + L ++A+ + LS ++ ++L DA+ KH L
Sbjct: 98 SGGVEVKIGDPSAGSGQVK--WYKPEEISAMILAKLKADAENYLGEKIEEAVITVPAYFDDSQRQSTKNAGEIAGLKVRRIINEPTAAALAYGLNRQKNEK------IVVYDFGGGTFDVSVLEIGDDVV-------------------------------------------------EVKSTGGDTHLGGDDIDKIIMDYLVNEYKKNEGIDLSKDPLALQRLKEAAEKAKHELSTVVEAEINLPYITSDANGP-KHFL 300
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Chaperone (protein DnaK n=1 Tax=Parcubacteria group bacterium CG10_big_fil_rev_8_21_14_0_10_36_14 TaxID=2014326 RepID=A0A2H0T5T5_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 4.210e-5 Identity = 57/239 (23.85%), Postives = 103/239 (43.10%), Query Frame = 1
Query: 433 LLTSPDASEAKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSSVS 1149
++ S D + K + +P+EV AM+LA +KA AEE G I+ ++VP D R A + + +AG+ R + P AAA+ Y + + KG ++ +G G +F DVS++ SADT V+++ GD+ GG D D ++ + +L + S G D+ D+ + + ++A+ + LS ++ ++
Sbjct: 93 IVKSGDGVKVKMGDKEYSPQEVSAMILAKMKADAEEKLGEKIEEAVITVPAYFDDAQRQATKDAGEIAGLKVKRIINEPTAAALAYGFDKK----KGQQAVVYDLG-GGTF-DVSVLDI----------SADT---------------------------------------VEVKSTNGDTHLGGDDFDQIIIQWILDEFKKSEGIDLGKDKLALQRIKEAAEKAKIELSTAGETEIN 276
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Chaperone (protein DnaK n=2 Tax=Patescibacteria group TaxID=1783273 RepID=A0A521S895_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 4.260e-5 Identity = 60/242 (24.79%), Postives = 97/242 (40.08%), Query Frame = 1
Query: 484 TPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEVTL 1209
TPEE+ AM+LA +KA AEE G + ++VP D R A + + +AG+ R V P AAA+ Y + + + IL +G DVS++ + P +E V+A+ GD+ GG D D +V +LA + G D+ D + + D+A+ + LS ++ ++ +P KH L +TL
Sbjct: 110 TPEEISAMVLAKLKADAEEKLGEKVTEAVITVPAYFDDAQRQATKVAGEIAGLKVLRIVNEPTAAALAYGFDKKVGQK------ILVYDLGGGTFDVSVL-----------------------------------------------EVSPDTVE--VKATNGDTHLGGDDFDRVVIDWILAEFKKQEGVDLGKDALAMQRIKDAAERAKIELSTAAQTEIN-QPFITSGAEGPKH-LVLTL 294
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2NAM7_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 7.360e-5 Identity = 67/255 (26.27%), Postives = 104/255 (40.78%), Query Frame = 1
Query: 406 DGDTSGVRVLLTSPDASEAKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEY-RVRASAGDSACGGLDMDYLVARALLA--AVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPG 1161
DG RV L + + + V+P+EV A++LA +KA+A G I+ ++VP D R A + + LAG+ R V P AAA+ Y G + G DVS++ + G A +A + + + +V ++AGD+ GG D+D+ + RALLA VE G R R+L A+ L+ RLS +++V L G
Sbjct: 105 DGPHETARVALPTAEGNRI------VSPQEVSAVILAALKARASRELGRDIRRAVVTVPAYFDDAQRQATRDAGRLAGLEVVRIVNEPTAAALAYGIGAKRDV---GSQTVAVYDFGGGTFDVSILR---------------------------------------LSGGDASEAHDRELGFFQVLSTAGDTRLGGDDIDHALTRALLAEGGVEIDRGSLPPEAR---RSLATFARDLKHRLSEVEQTAVRLDLG 308
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R112_PSEPJ) HSP 1 Score: 56.2 bits (134), Expect = 7.440e-5 Identity = 51/241 (21.16%), Postives = 96/241 (39.83%), Query Frame = 1
Query: 484 TPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEVT 1206
+P ++ + +L +K AE G + ++VP D R A + + ++G+ R + P AAA+ Y G E K +I +G D+S++ E + V+A+ GD+ACGG D+D +V ++A + SG D++ D+ + + ++A+ + LS+ S V+L DA ++++T
Sbjct: 136 SPSQIGSYVLVKMKETAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGKISGLNVLRIINEPTAAALAY--GMDKSEGK----VIAVYDLGGGTFDISIL-------------------------------------------------EINNGVFEVKATNGDTACGGEDVDVIVQNHIIAEFKSQSGIDISKDKMAIQRVREAAEKAKVELSSTATSEVNLPYLAADASGPKHCNVKIT 321
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Match: Chaperone (DnaK-HSP-70 n=2 Tax=Desulfotignum TaxID=115780 RepID=S0G2G9_9DELT) HSP 1 Score: 55.8 bits (133), Expect = 9.360e-5 Identity = 55/214 (25.70%), Postives = 89/214 (41.59%), Query Frame = 1
Query: 484 TPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSVPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREATPPSADSADTGXXXXXXXXXXXXXXXXXXXGKXXXNKGKAGQAEPQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPDVASDRALWRNLLDSAKLLRERLS 1125
+P+E+ AM+L +KA+AE+A G ++ ++VP D+ R A + + +AG+ R + P AAA+ Y G + + D IL +G DVS++ K +AG E V AS GD+ GG D D + LL + + G D+A D L +A++ + +LS
Sbjct: 88 SPQEISAMILKTLKARAEDAIGGPVQKAVITVPAYFTDVQRQATRDAGRIAGLEVLRIINEPTAAALAY--GEAGRD---EDRHILIYDLGGGTFDVSIV------------------------------------------KIEAGVVE-------VLASTGDNRLGGEDFDEALVAYLLDHIREHHGRDLADDPVAAARLKSAAEVAKMQLS 247 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9677.17681.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9677.17681.1 >prot_E_fasciculatus_S2_contig9677.17681.1 ID=prot_E_fasciculatus_S2_contig9677.17681.1|Name=mRNA_E_fasciculatus_S2_contig9677.17681.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=404bp NVQACLYLKDGGCKTVGGKAPLPAGVLIDRKTGVKGVRRWLKSRAGGGPAback to top mRNA from alignment at E_fasciculatus_S2_contig9677:191..5288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9677.17681.1 ID=mRNA_E_fasciculatus_S2_contig9677.17681.1|Name=mRNA_E_fasciculatus_S2_contig9677.17681.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5098bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9677:191..5288+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9677:191..5288+ >mRNA_E_fasciculatus_S2_contig9677.17681.1 ID=mRNA_E_fasciculatus_S2_contig9677.17681.1|Name=mRNA_E_fasciculatus_S2_contig9677.17681.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1212bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9677:191..5288+ (Ectocarpus fasciculatus EfasUO2)back to top |