mRNA_E_fasciculatus_S2_contig9639.17649.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9639.17649.1
Unique NamemRNA_E_fasciculatus_S2_contig9639.17649.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.940e-80
Identity = 133/146 (91.10%), Postives = 139/146 (95.21%), Query Frame = 1
Query:   22 STPVAGLPAVMFDCHAHLTDSSLAEGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHPEKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAK 459
            ST VAGLPAVMFDCHAHLTDSSLAEGLHQTLL+AEA GVTGIVAVSESL+DATPVVELCASI+ +ASR R LRLHPSIGMHPEKAD+ KVDDVL LI+KHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAK
Sbjct:   36 STLVAGLPAVMFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADVHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAK 181          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: TatD (DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 6.110e-75
Identity = 124/136 (91.18%), Postives = 129/136 (94.85%), Query Frame = 1
Query:   52 MFDCHAHLTDSSLAEGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHPEKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAK 459
            MFDCHAHLTDSSLAEGL QTLL+AEA GVTGIVAVSESL+DATPVVELCASI+ +ASR R LRLHPSIGMHPEKADL KVDDVL LI+KHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAK
Sbjct:    1 MFDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAK 136          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Dnase (domain containing 3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CPC6_NANGC)

HSP 1 Score: 94.4 bits (233), Expect = 8.810e-19
Identity = 57/131 (43.51%), Postives = 76/131 (58.02%), Query Frame = 1
Query:   52 MFDCHAHLTDSSLAEGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHPEKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQ 444
            MFD HAHLT   L   L + L +A + GV  IV VSE++ DA  V+ L    +G       +RLH S+G+HPE A L  +  VL LI ++   + CVGE+GLDFS H++G      AE  K +QRE  R+Q
Sbjct:    1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNG-------VRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDD---AEAVKALQRECMRQQ 121          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.200e-18
Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   52 MFDCHAHLTDSSLAEGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHPEKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRA 456
            +FDCHAH+TD+  +  L   L    A GV G+V VS  + D+  V++L        S++ ++   PS+G+HPE A++  +  ++  I ++ D +  VGEVGLD+S H++GE  GE AE  K +QREVF +Q  +A
Sbjct:   16 VFDCHAHMTDTEFSNDLENVLEMCNATGVQGLVCVSSGVHDSEKVLQL-------GSKHPSVI--PSVGLHPEFANISDLPTIITQITQYHDQLASVGEVGLDYSPHILGE--GE-AEERKAIQREVFSQQVLKA 138          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: TatD (family hydrolase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HTJ8_SPIPD)

HSP 1 Score: 80.9 bits (198), Expect = 5.090e-14
Identity = 56/140 (40.00%), Postives = 76/140 (54.29%), Query Frame = 1
Query:   49 VMFDCHAHLTDSSL-AEGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHPEKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGE--SGGERAERAKEVQREVFRRQARRAK 459
            ++ DCHAHL      ++ LH  L  AE  GVT I+ V E+LEDA  V+EL A+            + PS   +P     D+V  VL LI +++D IV +GE GLDFS H+     SG   A+R  + Q++VF  Q R AK
Sbjct:    1 MLIDCHAHLYPPQFPSDTLHSVLQRAETAGVTSIINVPETLEDAKIVLELAATHKILQPCVGLHPVQPSANGNPRSVRADEVQPVLDLIQRYSDRIVAIGECGLDFSPHVFRTIPSGDIPAQR--DAQKQVFAAQIRLAK 138          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Putative (deoxyribonuclease TATDN3-like protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VHK0_9FUNG)

HSP 1 Score: 79.3 bits (194), Expect = 1.900e-13
Identity = 48/147 (32.65%), Postives = 76/147 (51.70%), Query Frame = 1
Query:   55 FDCHAHLTDSSLA-EGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHP----------------EKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQ 444
            FDCHAH+   S + E +   +  A+ K + GI++V+E+ ED       C  +   A +Y  + L P +G+HP                  + LD+V  +L LI KH + IVC+GEVGLD+S   +     +  E  K++Q+E+F +Q
Sbjct:    5 FDCHAHINSPSFSKEAISNLIKKAQEKHIKGIISVTETYED-------CIDVLNVAKQYPNILL-PGLGLHPIQPLIDENGKRLDKGGRSSTLDEVYPILDLIKKHKEEIVCIGEVGLDYSPQFL-----KNVEEEKKIQKEIFEKQ 138          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Uncharacterized (protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N0C6_PIRSE)

HSP 1 Score: 79.0 bits (193), Expect = 2.610e-13
Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 1
Query:   46 AVMFDCHAHLTDSSLA-EGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHP----------------EKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQ 444
            A  FDCHAH+   S + E +   +  A+ K V GI++V+E+ ED       C  +     +Y  + L P +G+HP                  + LD+V  +L LI +H D IVC+GEVGLD+S   +     +  E  KE+Q+++F++Q
Sbjct:    2 ASYFDCHAHINSPSFSKEAISDLVKKAQEKNVKGIISVTETYED-------CLDVLNVVMQYPNIIL-PGLGLHPIQPLVDENGQRLDKGGRSSTLDEVYPILDLIKEHKDEIVCIGEVGLDYSPQFL-----KNVEEEKEIQKQIFQKQ 138          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPV6_TETOB)

HSP 1 Score: 77.4 bits (189), Expect = 1.240e-12
Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 1
Query:   49 VMFDCHAHLTDSSLAEG-LHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHPEKA---------DLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQ 444
            ++ DCH+H      +   +      A   GV  IV V ESL+D   V++L      E        LHP   +H +           D+ +V  VLA I KHA  +V VGEVGLDFS H++G+   E  +R ++VQREVF++Q
Sbjct:    1 MIIDCHSHFYTPQFSRADIPGLAAAARHAGVQAIVTVPESLQDCEAVLQLARE---EPIVQACAGLHPVQPIHADGQFYSSCRSVQDVSEVSPVLAFIRKHASELVAVGEVGLDFSPHVVGKVHSEEEQRLRDVQREVFKQQ 139          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Mg-dependent (DNase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1VVX4_9FUNG)

HSP 1 Score: 73.9 bits (180), Expect = 1.540e-11
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 1
Query:   55 FDCHAHLTDSSLA-EGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHP----------------EKADLDKVDDVLALINKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQ 444
            FDCHAH+   S + E +   +  A+ K V GI++V+E+ ED       C  +   A +Y  + L P IG+HP                  + LD+V  VL LI +H   IVC+GEVGLD+S   +     +  E  K +Q+++F +Q
Sbjct:    6 FDCHAHINSPSFSKENIEIIVNKAKEKNVKGIISVAETYED-------CLDVLNVAKQYSKIIL-PGIGLHPIQPLVDENGQRLDKGGRSSTLDEVYPVLDLIKEHQKEIVCIGEVGLDYSPQFL-----KNVEEEKIIQKQIFEKQ 139          
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Match: Putative (deoxyribonuclease TATDN3-like protein (Fragment) n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GHD1_9FUNG)

HSP 1 Score: 70.5 bits (171), Expect = 2.310e-10
Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = 1
Query:   52 MFDCHAHLTDSSLAEGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCASISGEASRYRTLRLHPSIGMHPEKADLDKV------DDVLA---LINKHADT--IVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQ 444
            M D HAH+T+S+ ++ L + L DA+   V  I++VSES+ D+  V+ +    +G         + P++G+HP ++  D        DD +A   ++ +  DT  IVCVGEVGLDFS H++ +    + E+ K +QR +F+ Q
Sbjct:    1 MIDVHAHITESNFSD-LERLLADAKDAKVQHIISVSESIHDSASVLRIAQQSNG--------MIWPALGLHPVQSCPDGSYRSVIWDDWIAFKPMLQRAIDTKAIVCVGEVGLDFSYHVLDKDANIQEEQRK-IQRMIFKEQ 132          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9639.17649.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.940e-8091.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
TatD6.110e-7591.18DNase domain containing 3 n=1 Tax=Ectocarpus silic... [more]
Dnase8.810e-1943.51domain containing 3 n=3 Tax=Monodopsidaceae TaxID=... [more]
Hypothetical5.200e-1839.26protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
TatD5.090e-1440.00family hydrolase n=2 Tax=Spizellomyces TaxID=4815 ... [more]
Putative1.900e-1332.65deoxyribonuclease TATDN3-like protein n=1 Tax=Piro... [more]
Uncharacterized2.610e-1332.67protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73... [more]
Uncharacterized1.240e-1235.92protein n=1 Tax=Tetradesmus obliquus TaxID=3088 Re... [more]
Mg-dependent1.540e-1133.33DNase n=1 Tax=Anaeromyces robustus TaxID=1754192 R... [more]
Putative2.310e-1034.51deoxyribonuclease TATDN3-like protein (Fragment) n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9639contigE_fasciculatus_S2_contig9639:411..1651 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score240.4
Seed ortholog evalue5.2e-61
Seed eggNOG ortholog2880.D7FNX7
Preferred nameTATDN3
Model size919
KEGG koko:K03424
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.hydrolase activity, acting on ester bonds
EggNOG OGsCOG0084@1,KOG3020@2759
Cds size414
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842609.7212024-UTR-E_fasciculatus_S2_contig9639:410..4611696842609.7212024-UTR-E_fasciculatus_S2_contig9639:410..461Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9639 411..461 +
1696842609.753407-UTR-E_fasciculatus_S2_contig9639:1197..16511696842609.753407-UTR-E_fasciculatus_S2_contig9639:1197..1651Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9639 1198..1651 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842609.7340314-CDS-E_fasciculatus_S2_contig9639:461..5931696842609.7340314-CDS-E_fasciculatus_S2_contig9639:461..593Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9639 462..593 +
1696842609.7444263-CDS-E_fasciculatus_S2_contig9639:915..11971696842609.7444263-CDS-E_fasciculatus_S2_contig9639:915..1197Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9639 916..1197 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9639.17649.1prot_E_fasciculatus_S2_contig9639.17649.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9639 462..1197 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9639.17649.1

>prot_E_fasciculatus_S2_contig9639.17649.1 ID=prot_E_fasciculatus_S2_contig9639.17649.1|Name=mRNA_E_fasciculatus_S2_contig9639.17649.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=138bp
MFDCHAHLTDSSLAEGLHQTLLDAEAKGVTGIVAVSESLEDATPVVELCA
SISGEASRYRTLRLHPSIGMHPEKADLDKVDDVLALINKHADTIVCVGEV
GLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKV*
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mRNA from alignment at E_fasciculatus_S2_contig9639:411..1651+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9639.17649.1 ID=mRNA_E_fasciculatus_S2_contig9639.17649.1|Name=mRNA_E_fasciculatus_S2_contig9639.17649.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1241bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9639:411..1651+ (Ectocarpus fasciculatus EfasUO2)
GCAGTCCAGCACCTGGCACTCTCGACGCCGGTCGCCGGTCTCCCCGCCGT CATGTTTGACTGCCATGCGCACCTCACGGACTCCTCTCTGGCGGAAGGAC TACATCAGACCCTCCTAGACGCAGAAGCAAAAGGGGTGACCGGGATCGTT GCCGTATCTGAGTCTCTCGAGGACGCTACACCGGTAAGATGTAAGATGTT GCACACGGCCGGCGCGATACACGCACATGCCAAATTCCAAGCCGCACCCT TGCACAACAGCAGGGTCCTGTAGCAATACGCCGGTCATGCTGCCTCCAAG GTGTATTGGCAAACCTTTTGTGCAGCCGCGAATACAGCAGTATACGTATC ATTTCGTAGCGGTACAGTTGCGGTGCGATCTGCTGTCGCGGTAACACTAC GTTTTTTTGTTTTTTTTACGTTTATTTTCGGGTAAACCGTTTTCGGCCGT TGGCTCAGTCTCCACTCGTGCAACCCCGCTCGCTTTCAATGTTTTGTATG CATAGGTGGTCGAACTATGCGCGTCCATCAGCGGTGAAGCGTCTCGATAT CGGACGCTTCGGCTCCACCCATCCATCGGCATGCACCCGGAAAAGGCAGA CCTCGACAAGGTGGACGACGTCCTCGCACTCATCAACAAGCACGCCGACA CGATAGTCTGCGTTGGGGAGGTAGGCCTGGACTTCAGCCGCCACTTGATC GGCGAGTCCGGCGGGGAGCGGGCGGAGAGGGCCAAGGAGGTTCAGAGGGA GGTCTTTCGGCGGCAGGCCCGCCGCGCGAAGGTCTGACGGGGGGCATCAT TCTCTCATGTGCCTTGAACTGCTCTCGATGAGACGGCTTTCAACGCCGCC GTTGCGGCGCTCCCACTTTGTGTGCTGTGGAGATTTCGAGCTTTGAAAAT CGCCTACGGGGAGTGATATCTTGTGTCGCCTACCGTTGTATACCAACAAT TCCGATGTCTTCACGCGAGAGGAAGATCGGCGGGCTTATAGTGCAAAGAG AGAAACAGTCGTCACTGCAGTGGTGTGACTCTCTACACGTACATGTGCGG TTTGGGGTCACCTGATATTTCCAGCTGTCTCGTTCGGCTCTACGACGTAC GTTTTGCTCTCACGGAATTGTTTATGACTTTCCCTGGCCAACGTCCATGC TGCCCCCATGGGGCGTTGTAGGTGAGGCATGTGAAGAGAGGTTGCAGTGG AAAAAGCAGTATATTGGCGGCGACGTGTCGAGCGCTTTTTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9639:411..1651+

>mRNA_E_fasciculatus_S2_contig9639.17649.1 ID=mRNA_E_fasciculatus_S2_contig9639.17649.1|Name=mRNA_E_fasciculatus_S2_contig9639.17649.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=414bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9639:411..1651+ (Ectocarpus fasciculatus EfasUO2)
ATGTTTGACTGCCATGCGCACCTCACGGACTCCTCTCTGGCGGAAGGACT
ACATCAGACCCTCCTAGACGCAGAAGCAAAAGGGGTGACCGGGATCGTTG
CCGTATCTGAGTCTCTCGAGGACGCTACACCGGTGGTCGAACTATGCGCG
TCCATCAGCGGTGAAGCGTCTCGATATCGGACGCTTCGGCTCCACCCATC
CATCGGCATGCACCCGGAAAAGGCAGACCTCGACAAGGTGGACGACGTCC
TCGCACTCATCAACAAGCACGCCGACACGATAGTCTGCGTTGGGGAGGTA
GGCCTGGACTTCAGCCGCCACTTGATCGGCGAGTCCGGCGGGGAGCGGGC
GGAGAGGGCCAAGGAGGTTCAGAGGGAGGTCTTTCGGCGGCAGGCCCGCC
GCGCGAAGGTCTGA
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