mRNA_E_fasciculatus_S2_contig962.17634.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig962.17634.1
Unique NamemRNA_E_fasciculatus_S2_contig962.17634.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Cysteine (proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI)

HSP 1 Score: 647 bits (1669), Expect = 4.020e-228
Identity = 341/358 (95.25%), Postives = 349/358 (97.49%), Query Frame = 1
Query:  253 MATLAESRGQRVQKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGDDASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGAEGLMTIPCIVAHMSQLFIDAYIASRWANDDVAAVEDAAGGAKTNGVVSTI 1326
            M TL ESRGQRVQKFC+KNVLPLGFFVVLVIALAWPAPGKAVAKPKV DYR+VQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYG+VAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMN+GGNDALALLLTVTTNLLGVVTVPFYVKGVV AG+DASIDPVGLLVKLI+SVLVPLVVGKVIREAVPGAKA VKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLG+VG EGLMTIPCIV HMSQLF+DAYIASRWANDDVAAVED A GAKTNGVVSTI
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGNVGQEGLMTIPCIVGHMSQLFMDAYIASRWANDDVAAVEDEAEGAKTNGVVSTI 358          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE)

HSP 1 Score: 464 bits (1194), Expect = 3.580e-157
Identity = 252/296 (85.14%), Postives = 257/296 (86.82%), Query Frame = 1
Query:  253 MATLAESRGQRVQKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMN-----------------------------------SGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGDDASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 1035
            M TL ESRGQRVQKFC+KNVLPLGFFV LVIALAWPAPGKAVAKPKVDDYR+VQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYG+VAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMN                                   +GGNDALALLLTVTTNLLGVVTVPFYVKGVV AGDDASIDPVGLLVKLI+SVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 296          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Cysteine (proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA)

HSP 1 Score: 320 bits (821), Expect = 6.530e-100
Identity = 172/317 (54.26%), Postives = 227/317 (71.61%), Query Frame = 1
Query:  319 LGFFVVLVIALAWPAPGKAVAKPKVDDYR-VVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGDD----ASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGAEGLMTIPCIVAHMSQLFIDAYIASRW 1254
            +G    ++I L+WP  G+ V  P   +Y     T  VI IFIISGLTLKTDDI+ A+SK+GR G IYGI+AILGIT  +GF+   +P    EF+YGL+VFC VPTTL+SGV++V  +GGN ALALLLTV TNL  VVT PF++  + ++       A+IDPV LL KLIV+VLVPLV GK++R+ VPG K +V R KV+L + ++ ML ++VW T+S A ++L S  F  I  VIA GI +H++YLS+N+P+ K+ LKL   EFKAV +M+SQKTLP+SVT+I +L  +G+ G MT+PCIV HMSQLFIDA + S W
Sbjct:    1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTISDAAEDLLSTPFADIAVVIACGIAVHVIYLSLNWPMGKFALKLPLPEFKAVTIMASQKTLPLSVTIISYLTALGSTGFMTLPCIVGHMSQLFIDAGLQSMW 317          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Cysteine (proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.230e-91
Identity = 156/323 (48.30%), Postives = 229/323 (70.90%), Query Frame = 1
Query:  331 VVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGDDASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGAEGLMTIPCIVAHMSQLFIDAYIASRWANDDVAAVEDAAGGA 1299
            + L+I LAWP PG  V+   V DYRVVQT+NV+ +F+ISGL LK+ DI+ A+S+EG  G+I G+V ILG+T   GFVA  +PF   EF+YGL++FC VPTT++ GV +   +GGN ALAL+LTV +NLLGV+  PF+++    +G D +ID + LLV L+++VL PL+VG+ IR  VP  +  V R K  L L SS  L ++VWQT+SR+ +++ +V+   I+++IA+ + +H+ YL +++   +Y+L+L   E KAVV+MSS+KTLPV++ VI FL +VG+EGL++IP IV+   QLF+D++IA++W     AA   AA  A
Sbjct:    1 MALLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFF-SGQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVSRSAEDILAVSGGSIVAIIAASLIMHVAYLVVSFVTARYLLRLGDAELKAVVIMSSEKTLPVAIAVIAFLTNVGSEGLLSIPPIVSQQVQLFMDSFIATKWGEKTSAAARHAATAA 322          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Bile (Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 293 bits (750), Expect = 3.580e-89
Identity = 163/356 (45.79%), Postives = 236/356 (66.29%), Query Frame = 1
Query:  280 QRVQKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRA---GDDASIDP------VGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GAEGLMTIPCIVAHMSQLFIDAYIASRWANDDVAAVEDAAGGAKTNGV 1314
            +R + + +KN L LGF  V+V+AL+WP PG+ +  PK  D+ + QT  ++VIF ISGLTLKT DIK+AL +       YGI+ IL +T  +GFV  +IPF+  EF YGL++F  VPTTL+SGVTLV ++ GN  +AL+LTVTTN+LGV TVPF +  V+ +   GD    D         LL+KLI+S+++P+ VGK  RE V  A ++  ++K  L LT+++ LI +VW ++S ++  L   +   I  ++ +G+ LHL +L++N+ +   ++K+   E +AV+LM+SQKTLPV+VT+I +L +   GA+GL+ IPCIV H+SQLFIDAYIAS WA  D   + D    AK  GV
Sbjct:   17 KRWKPWLIKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPAA--LAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSISNSRGKLVRESALNIFVIVVAGVLLHLFFLTMNWVMTTAVMKIPEAERRAVLLMTSQKTLPVAVTIIAYLDEARWGAQGLIAIPCIVGHVSQLFIDAYIASIWAGQDPKEI-DERNAAKRAGV 369          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Hypothetical (protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 284 bits (727), Expect = 8.340e-86
Identity = 154/353 (43.63%), Postives = 233/353 (66.01%), Query Frame = 1
Query:  280 QRVQKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGD----------DASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GAEGLMTIPCIVAHMSQLFIDAYIASRWA-NDDVAAVEDAAGGA 1299
            +R + + L+N L LGF  V+ + L+WP PG  +  P   D+ + QT  ++ IF ISGLTLKT DIK AL++    G +YGI+ ILG+T  +GF+  +IPF+  +F YGL++FC VPTTL+SGVTLV ++ GN ALAL+LTVTTN+LGV TVPF +  V+ +              +   + LL+KL++S+++P+ +GK +RE    A+     +KV L L +++ LI +VW ++S++++ L       I  ++ +GI LH+++L++N+ +   +L+L+ +E +AV+LM+S KTLPV+VTVI +L +   G  GL+ IPCIV H+SQLFIDA IA+RWA N   A     AGG+
Sbjct:    3 RRWKPWLLRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHV--GLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVSKSREKLVGQTPLNIFIIVVAGITLHIIFLAVNWTMTTPVLRLREKERRAVLLMTSAKTLPVAVTVISYLDEAVWGGHGLIAIPCIVGHVSQLFIDAAIAARWAANPPPADAAAEAGGS 353          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO)

HSP 1 Score: 272 bits (696), Expect = 1.480e-81
Identity = 162/348 (46.55%), Postives = 222/348 (63.79%), Query Frame = 1
Query:  283 RVQKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGD----------DASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGD--VGAEGLMTIPCIVAHMSQLFIDAYIASRWANDDVAAVEDAA 1290
            R +KF + N L LGF + L I L+ PA G  +A      + +VQTI VI+IFIISG TLKT++I +AL + GR    YG+V+ILG+T  +GF+   IP+   +F YGL++FC VPTTL+SGVTLV N+ GN ALAL+LTV+TNLLGV TVPFY   + R+G           D     V LLVKL+ ++LVP+  GK+ RE +P       + K  L+LT+++ LI+VVW ++S++   L S     I  VI +GI  H+V+L+INY      L +   E  A V+MSSQKTLPV++TVI +L +   G  GL+ IPCI+ H++QLF+DA +A+R A    AA   AA
Sbjct:   24 RAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSISKSAKQLLSTDAGSIFLVIFAGIATHVVFLAINYG-ATGALGISGPERVASVMMSSQKTLPVAMTVISYLDEDVFGTSGLIAIPCIICHLTQLFMDAPLATRLAKRFAAAAAXAA 369          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: BASS (family transporter: sodium ion/bile acid (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RT86_OSTLU)

HSP 1 Score: 270 bits (691), Expect = 1.870e-81
Identity = 155/328 (47.26%), Postives = 219/328 (66.77%), Query Frame = 1
Query:  295 FCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAG------------DDASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGD--VGAEGLMTIPCIVAHMSQLFIDA 1236
            F L N L  GF + L+  L+ PA GKA+AK  V  + V+QT+ V++IF+ISG TLKT++I +AL K GR    YG VAILG+T  +GF+   +P+   EF YGL++FC VPTTL+SGVTLV N+ GN ALAL+LTV+TNL+GV TVPFY   VV +G            +D S   V LLVKL+ ++L+P+V+GKV RE +P   A+    K  L+LT+++ LI+VVW ++S++   L       I +V+ + + +H+V+L+INY    + L L   E  A V+MSSQKTLPV++T+I +L +   G+ GL+ IPCIV H++QLF+DA
Sbjct:    1 FLLDNFLVCGFCLALLFGLSVPAAGKALAKVSVSGWSVIQTVCVVIIFVISGATLKTEEITQAL-KAGRGALGYGWVAILGLTPLLGFILVRVPYKPIEFRYGLALFCCVPTTLTSGVTLVRNAKGNVALALMLTVSTNLIGVFTVPFYFNAVVASGPREMASAVNGAANDMSTQAVKLLVKLLFTILLPIVLGKVAREMIPAVAAFANARKAELTLTNNSCLIIVVWMSISKSAKELIDTNVGTIFAVLFAAVLVHVVFLAINYA-ATHALGLSGPERVACVMMSSQKTLPVAMTIISYLPEDVFGSGGLIAIPCIVCHITQLFMDA 326          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W7R8_TETOB)

HSP 1 Score: 268 bits (684), Expect = 2.580e-79
Identity = 156/326 (47.85%), Postives = 214/326 (65.64%), Query Frame = 1
Query:  289 QKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRW-GYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGD--DASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLG-DVGAEGLMTIPCIVAHMSQLFIDAYIASRW 1254
            ++F L N + L F +   +A+AWP PGKAVA   V D RVVQ +N  ++F+ISGLTLK+DD +  L     W G +YG++AIL IT  +GF    IPF   EF+ GL++FCVVPTTL  GV L   S GN ALALLLTV TNLLG+VTVP+ ++ V+  G     S++P  L+VKLI++VLVP V+GK+ R+     + +V RFK  LSL S+  L  +VWQTLS A+  L    F  +L V+ +   LH+V L  N  + +Y+L+L  RE  AVV+MSSQK+ PV+VTVI +L   +  +GLM IPCI+  ++Q+FI + +A +W
Sbjct:   80 KQFALDNFMLLSFSLAAALAMAWPVPGKAVASWAVGDVRVVQALNNFLVFLISGLTLKSDDFRALLK---HWVGVLYGLIAILAITPCLGFAMLAIPFQPPEFATGLALFCVVPTTLGVGVALTAASKGNQALALLLTVATNLLGIVTVPYELRLVLSTGSVSTVSVEPGSLVVKLILTVLVPSVIGKLARDLFKPVQRFVTRFKTPLSLFSTLNLACIVWQTLSGARQTLLQQPFVAVLLVVVASSLLHVVMLLFNGLVVRYLLRLPFREAVAVVIMSSQKSAPVAVTVISYLTPSLTQQGLMAIPCILGQLAQIFIGSALA-KW 401          
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Match: Putative (sodium/metabolite cotransporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCM7_9CHLO)

HSP 1 Score: 268 bits (684), Expect = 6.120e-79
Identity = 148/332 (44.58%), Postives = 217/332 (65.36%), Query Frame = 1
Query:  277 GQRVQKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVD----DYRVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTVTTNLLGVVTVPFYVKGVVRAGDDASIDPVGLLVKLIVSVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GAEGLMTIPCIVAHMSQLFIDAYIASRW 1254
              +V  F  KN LPLG      +A+ +P PG+ V K  V+    DY++V +  + +IF+ SG TLKTDDI +A       GY  G VAIL IT  +GF   ++PF    F+ GLSVFC VPTTLSSGV LV   GGN ALALLLTV TNLLG++TVPF VK V+ + +D   D + LL+KL +++L PL++GK++R +      + K  K + S+ +S  L+++VWQTLS+AQ  +   +   +L ++A GIG+H+ +L  N+ I   +L++++ E++A++L +SQKTLP++VTVI FL +   G  GL+ +PC+V+H+ Q+ ID+ I SRW
Sbjct:    2 SSKVWPFLKKNFLPLGLVTAATVAMVYPPPGREVQKHMVEVNGNDYKLVSSCLIFLIFLSSGFTLKTDDIMKAAKNYVAVGY--GFVAILLITPTLGFGIMKLPFKPKAFASGLSVFCAVPTTLSSGVALVTQGGGNAALALLLTVGTNLLGILTVPFAVKLVLDSEEDFDFDALSLLIKLAITILAPLILGKLLRHSHQALGKFAKEKKQKFSMANSLCLVLIVWQTLSKAQPEVIDQSAGDLLLLVAGGIGIHIAFLVFNF-ISVSLLRVEQPEYRALLLCTSQKTLPIAVTVINFLPEPYEGYHGLLVVPCVVSHLVQILIDSVIVSRW 330          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig962.17634.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cysteine4.020e-22895.25proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus Ta... [more]
Uncharacterized3.580e-15785.14protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Cysteine6.530e-10054.26proteinase cathepsin F n=1 Tax=Tribonema minus Tax... [more]
Cysteine1.230e-9148.30proteinase cathepsin F n=1 Tax=Tribonema minus Tax... [more]
Bile3.580e-8945.79Acid:Na+ symporter family n=2 Tax=Micromonas TaxID... [more]
Hypothetical8.340e-8643.63protein n=1 Tax=Mantoniella antarctica TaxID=81844... [more]
Hypothetical1.480e-8146.55protein (Fragment) n=1 Tax=Ostreococcus mediterran... [more]
BASS1.870e-8147.26family transporter: sodium ion/bile acid (Fragment... [more]
Uncharacterized2.580e-7947.85protein n=1 Tax=Tetradesmus obliquus TaxID=3088 Re... [more]
Putative6.120e-7944.58sodium/metabolite cotransporter n=1 Tax=Chloropico... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig962contigE_fasciculatus_S2_contig962:18952..22033 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score644.0
Seed ortholog evalue4e-182
Seed eggNOG ortholog2880.D7FQA3
Model size2061
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.symporter activity
EggNOG OGsCOG0385@1,KOG4821@2759
Ec32 ortholog descriptionPutative sodium bile acid cotransporter
Ec32 orthologEc-01_006880.1
Cds size1077
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig962.17634.1prot_E_fasciculatus_S2_contig962.17634.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig962 19684..21781 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842608.5839918-UTR-E_fasciculatus_S2_contig962:18951..196831696842608.5839918-UTR-E_fasciculatus_S2_contig962:18951..19683Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig962 18952..19683 -
1696842608.6447196-UTR-E_fasciculatus_S2_contig962:21781..220331696842608.6447196-UTR-E_fasciculatus_S2_contig962:21781..22033Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig962 21782..22033 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842608.5983942-CDS-E_fasciculatus_S2_contig962:19683..199781696842608.5983942-CDS-E_fasciculatus_S2_contig962:19683..19978Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig962 19684..19978 -
1696842608.609829-CDS-E_fasciculatus_S2_contig962:20209..204361696842608.609829-CDS-E_fasciculatus_S2_contig962:20209..20436Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig962 20210..20436 -
1696842608.6202254-CDS-E_fasciculatus_S2_contig962:20856..210001696842608.6202254-CDS-E_fasciculatus_S2_contig962:20856..21000Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig962 20857..21000 -
1696842608.630543-CDS-E_fasciculatus_S2_contig962:21370..217811696842608.630543-CDS-E_fasciculatus_S2_contig962:21370..21781Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig962 21371..21781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig962.17634.1

>prot_E_fasciculatus_S2_contig962.17634.1 ID=prot_E_fasciculatus_S2_contig962.17634.1|Name=mRNA_E_fasciculatus_S2_contig962.17634.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=359bp
MATLAESRGQRVQKFCLKNVLPLGFFVVLVIALAWPAPGKAVAKPKVDDY
RVVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGIVAILGITGAV
GFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNSGGNDALALLLTV
TTNLLGVVTVPFYVKGVVRAGDDASIDPVGLLVKLIVSVLVPLVVGKVIR
EAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILS
VIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVI
GFLGDVGAEGLMTIPCIVAHMSQLFIDAYIASRWANDDVAAVEDAAGGAK
TNGVVSTI*
back to top

mRNA from alignment at E_fasciculatus_S2_contig962:18952..22033-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig962.17634.1 ID=mRNA_E_fasciculatus_S2_contig962.17634.1|Name=mRNA_E_fasciculatus_S2_contig962.17634.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3082bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig962:18952..22033- (Ectocarpus fasciculatus EfasUO2)
GTTCTGCTGGAATCGGAGCTTGTGTTCGGAGCACGTTTAGCAGGCCCGCA AATCAACACCACCCCCGAGGACGCTGGCAGCAGGCGCCCCAAGAAGAAGA CAAAATTTGAAGTAGTTTAAATTTTCAAGACCTTCCCCGCGAGACAAGAG AGCCAGCAGCGAGGACACAACCGCCAGAGAGAGAGAGAGAGAGAGAGAGA GAGACCAACCAAACAAGCGGAACCGACGCAAGAATATCCTGCCCATCGTA TCATGGCAACGCTAGCGGAGTCACGGGGGCAGCGAGTGCAGAAGTTCTGC TTGAAAAACGTCCTTCCGTTGGGCTTCTTCGTTGTCCTGGTGATCGCCCT CGCTTGGCCGGCGCCTGGGAAGGCGGTGGCGAAGCCGAAGGTTGACGACT ACCGCGTAGTGCAAACCATCAACGTCATTGTCATCTTCATCATCTCCGGC CTTACCCTAAAGACCGACGATATCAAGGAAGCCTTGAGCAAGGAGGGGAG GTGGGGCTACATCTACGGGATCGTAGCCATCTTGGGGATCACGGGCGCCG TGGGTTTTGTTGCTGCGGAGATTCCCTTCGACGTGGATGAGTTCTCCTAC GGCTTGTCGGTGTTCTGCGTGGTGCCCACGACGCTGTCCTCAGGGGTGAC CCTGGTCATGAACGTGAGTTAGAGTAGTGGTGGGTGATGCTTTGTACATC ACAGGGTGTGGGAAGCTTTTCCCTTTCATGGACGTTTTCGTGTTTGTTGT CATGTCAAAGTATCCAACGCCAGCCGGGTCCGTAGACCCTACTGCAGTAC ATGTAGACGGTACCGACTGTAGACGATGTTATAGACTGCTGTGTAAATTC TTAGATTCCAGGTGCCACCAAATGTGCTGTATCCCCTTGGTTGCGGGAAA TAAGCCTGGTAGTGAACGTCGTCCGGGCCGCGCCGCAGCATCACTTGGTT CGCTGCAGTTACTCAACGGCGTTTCCCGGCGTTTGTTGCTTTTTTTCACG TCGCGCCCCCCCCCGTTTACCTTGTCGACACAGTCTGGGGGAAACGATGC CCTGGCACTCCTCCTCACCGTAACAACCAACCTGCTCGGAGTTGTGACGG TTCCGTTTTACGTCAAGGGCGTAGTTAGAGCCGGCGACGATGCGTCCATT GACCCGGTGGGCCTTCTCGTCAAGCTGGTGAGTCCGGAGAAGTGTGTTTG GTGTGAAAAAAACCGTTCTGTTGCACTGGCAACTGGACGACAAGCGCAGC AATGGGGTAGCTGTTCAAGAACCCACTACTGTGAGAACCCGCTTCGTTGT GCCGCTCTCGTGAGTGGGATACTTTTGGGGTGCAACGAGTATCAGGACGT GATGCCTAAAGACCCACAGCGCTTGTTTAGCGCTACCCGTTGTCGGCATA CCATTCCCACCTTGGCCCCCTCTTTTGTTGTGGATAGGTTGAAGTGACTG CTACCAAACTGGATTTGAACCCGAACAAAAAACAAACACACACATACATC CTCTCCGGTTGTCATTACTTTACGGTGCCTCGCCTTGTCTTGTCTGAATC TCTTGCCTGTTTGCACCCTGCCATTGCGTGTGTTTTTTGTGATCCAGATT GTTAGTGTTCTGGTTCCGCTGGTGGTGGGGAAGGTGATCAGGGAGGCAGT ACCGGGGGCGAAGGCGTGGGTGAAGCGGTTCAAGGTGCGGCTGAGCCTGA CGAGCAGCGCGATGCTCATCATGGTGGTGTGGCAAACCTTGAGCAGGGCG CAAGACAACTTGACTTCGGTGGCGTTCACGCAGATCTTGTCTGTCATTGC CTCGGGCATCGGGCTGCATTTAGTGTGAGTGTTCGCGTGGAGAAGTTCGA TAGCAAAACGTGCGTGGTGCGTGGATAGGCGAACATGTTGACTCGTACAG TAGTCGTGTGTTCTCGAGCTGGACAAGGCCAATTGTGCATGTACGGTGCA CACTTAGCCTTGTTTTTTACGAACATCAGGTTTGTTTTCTGTTTGTCGTG CTCTCTCACTTACTCTCGTTTCTCCCACCCGCCCACACGTCCCGTTCCCA ATCAGCTACCTGAGCATCAACTACCCGATCTGCAAGTACATCCTCAAGCT CAAGCGCCGAGAGTTCAAGGCCGTGGTGCTCATGAGCTCGCAGAAGACGC TGCCGGTGTCGGTCACCGTCATCGGCTTCCTCGGGGATGTGGGGGCAGAG GGGCTCATGACGATACCGTGCATCGTCGCGCACATGTCGCAGCTCTTCAT AGACGCTTACATAGCCTCCAGATGGGCCAACGACGATGTCGCCGCGGTGG AGGACGCAGCAGGGGGCGCGAAGACGAATGGGGTAGTTTCTACAATTTAG CTATTGCTCCTCTCTAGAGTAGGGCGGATTGAGTCGTGGGCGTCTTCTTT GGGGTCTTCTTGTGCAGTGTTTTTGTTTTATTTTTTCTCGCGCAACTCAC CGTGCTTGGTGTTGTTTGGCAGCATGTCCCCCTCCCTACCCTTCGGGATT GTCGAGGTTCGGTTGAGGTGAATGGCGGCCCCACTACTCACAGGCGTGCG CCGTTTGTATGGTTGTGGCATGTGTTGCAGATGGATGAGCTGGAGAGATT TCTTCAGCTCGCCTGTTGCCATGTCAATAGCGCTAGTTCGCCGATGATGC TTTGGTGGCTTCTTGGGCGTATGTAGATAGCAATTTATTGCTTGGGATAG AACGAACATAGTGCAGGGCGAATGCATGTGATACGAAACTTGGATAGGCA ACGAGTTCTAGGGAAGAACAGAGTGCTTTTGTCAGTATTGTTGGGCATCA GGTGATGTCTTTAAAGAGTTCGAGCATCCCAGGTCTTTTTACCATGCTCA ACGGCTACATACGTGGATACATAATTCATTGGTCAAACGTGGAATTTCCG AGCACACTTAAAAACTTCGCCAATGTAGAATCGGAGAGACAGAGGCTTTC GCCAAAGCCGGGCTTCTCGCGTACCAGTCTGCCCGGAATCGCTGCGAGAT TATGCACGATCCTCCAACCCACTGCGCTACGAAAACAAAGACGAAATGGT GGAGGCAACACTTAGAAATCGAACAGCAACTT
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig962:18952..22033-

>mRNA_E_fasciculatus_S2_contig962.17634.1 ID=mRNA_E_fasciculatus_S2_contig962.17634.1|Name=mRNA_E_fasciculatus_S2_contig962.17634.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1077bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig962:18952..22033- (Ectocarpus fasciculatus EfasUO2)
ATGGCAACGCTAGCGGAGTCACGGGGGCAGCGAGTGCAGAAGTTCTGCTT
GAAAAACGTCCTTCCGTTGGGCTTCTTCGTTGTCCTGGTGATCGCCCTCG
CTTGGCCGGCGCCTGGGAAGGCGGTGGCGAAGCCGAAGGTTGACGACTAC
CGCGTAGTGCAAACCATCAACGTCATTGTCATCTTCATCATCTCCGGCCT
TACCCTAAAGACCGACGATATCAAGGAAGCCTTGAGCAAGGAGGGGAGGT
GGGGCTACATCTACGGGATCGTAGCCATCTTGGGGATCACGGGCGCCGTG
GGTTTTGTTGCTGCGGAGATTCCCTTCGACGTGGATGAGTTCTCCTACGG
CTTGTCGGTGTTCTGCGTGGTGCCCACGACGCTGTCCTCAGGGGTGACCC
TGGTCATGAACTCTGGGGGAAACGATGCCCTGGCACTCCTCCTCACCGTA
ACAACCAACCTGCTCGGAGTTGTGACGGTTCCGTTTTACGTCAAGGGCGT
AGTTAGAGCCGGCGACGATGCGTCCATTGACCCGGTGGGCCTTCTCGTCA
AGCTGATTGTTAGTGTTCTGGTTCCGCTGGTGGTGGGGAAGGTGATCAGG
GAGGCAGTACCGGGGGCGAAGGCGTGGGTGAAGCGGTTCAAGGTGCGGCT
GAGCCTGACGAGCAGCGCGATGCTCATCATGGTGGTGTGGCAAACCTTGA
GCAGGGCGCAAGACAACTTGACTTCGGTGGCGTTCACGCAGATCTTGTCT
GTCATTGCCTCGGGCATCGGGCTGCATTTAGTCTACCTGAGCATCAACTA
CCCGATCTGCAAGTACATCCTCAAGCTCAAGCGCCGAGAGTTCAAGGCCG
TGGTGCTCATGAGCTCGCAGAAGACGCTGCCGGTGTCGGTCACCGTCATC
GGCTTCCTCGGGGATGTGGGGGCAGAGGGGCTCATGACGATACCGTGCAT
CGTCGCGCACATGTCGCAGCTCTTCATAGACGCTTACATAGCCTCCAGAT
GGGCCAACGACGATGTCGCCGCGGTGGAGGACGCAGCAGGGGGCGCGAAG
ACGAATGGGGTAGTTTCTACAATTTAG
back to top