mRNA_E_fasciculatus_S2_contig9619.17630.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L3_9PHAE) HSP 1 Score: 796 bits (2055), Expect = 3.820e-278 Identity = 522/749 (69.69%), Postives = 565/749 (75.43%), Query Frame = 1
Query: 1 AAPFRSAWERATTRRQAKPTTQRCMGVSSGAGQVAAAGLHNEDAWFSAGSGESHVRGRHKNGGRRAGSGLALAMSAVGRPPQLARPFPATSSLSSYTRPDAHMEARSSGDV---PERDLASKQGVSIPGGGVSATGGGGIESSAAPGAGSRRQVAGREARTGMEDAAASATVAADXXXXXXXXXXXXXXXXXXXGGNGDR--FGVANEEEKDGDDEWCPRAARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPE-----------IVPIVVRERRWMVSRQLSSWMGFILSHIGKYRRVTQQSTAARYKHKAXXXXXXXXXXXXXXXXXXXXXXR--GPGVRAPTTAVSTSES-SKTSTRATTVSAGPPQATAGDARVGNRVQAGRPEETAATGSDTGDDNTSLNLVSAS--LEASTTPTETQNMGVSPEGPAREDGDPSRLSSTGGGGEGEDVGEKKTAVDTAPAGVAGDVKPPVRKLGVNGREQAPARVVKEAAPEEAPRLGVISRRETGAVESSGAASSQGGRRLGVLSRGGVQMGGERVAEXXXXXXXDWEE---KEAARTLRRGKLLLHARRGVMEAEELLTTGKLTFPLKRRYVRELRRLK 2175
AAPFRSAWERA TRRQA TTQR +GVS+G GQVAAAG NEDA FSAG G SH R RH+NGG RAG LALAMSAVGRPPQLAR T+SLSSYTRPDAH+EA SSG P DLASKQGVSIP GGVSAT GG+ESSAAPGAGSRRQVAGREAR + DA +A A D GN DR +GV +EEEK GD EWCPR ARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDL+G+FIPDVQKE+EARRAAAQVKAV +AQ +MGGDTAVPGDAKEAR+P+SSSPA+S KG E+TFW+STS+CDSRNT+DDVDVEIISL RFFGQLIR EI GVETLHSMLVRDVELISDPE IVPIVVRERRWMVS +L+SWMGFILSHI KYRRVTQ+S AAR++HKA XXXXX GP P A T E S + RATTVS P QA G RV NRV A RP ETA+TG+DTGD N+SLNL+SAS LEASTT TETQ+ VSPE PAR+ GD R+SS GGGGEG GEK TAVDTAPAGVA PPVR+LGV GR +AP R V++AAPEEAPRLGVISR T VES GAASSQG RRLGVLSRGGV+M XXXXXXX KE ARTL+RGKLL+HARRGVMEAEELLT G+LTFPLK RYV ELRRLK
Sbjct: 76 AAPFRSAWERAITRRQA--TTQRLVGVSNGEGQVAAAGWCNEDALFSAGDGGSHARRRHRNGGGRAGRDLALAMSAVGRPPQLARLSWPTASLSSYTRPDAHVEAGSSGGNVPGPGHDLASKQGVSIPEGGVSATREGGVESSAAPGAGSRRQVAGREARAAIGDAGPAAADATDAAVAVGE-------------GNDDRLGWGVTDEEEKGGDGEWCPRVARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEKEARRAAAQVKAVAKAQ-NMGGDTAVPGDAKEARMPSSSSPALSPKGSGKGK--EITFWYSTSNCDSRNTVDDVDVEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEVYVPKYILRKQIVPIVVRERRWMVSSRLASWMGFILSHIHKYRRVTQESNAARFRHKAFLRKRSLSAAAKSLPAAXXXXXXXXGPTSTGPGDAAPTGEGISNATNRATTVSVAP-QAAVG-VRVENRV-ADRPAETASTGTDTGD-NSSLNLISASGTLEASTTATETQSKRVSPEEPARQAGDLPRVSSRGGGGEG--AGEKSTAVDTAPAGVAVSKIPPVRRLGVIGRTKAP-RAVEDAAPEEAPRLGVISRPGTRDVESRGAASSQGARRLGVLSRGGVKMXXXXXXXXXXXXXXXXXXXXXKETARTLKRGKLLMHARRGVMEAEELLTAGRLTFPLKPRYVEELRRLK 799
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H5_ECTSI) HSP 1 Score: 512 bits (1318), Expect = 2.050e-170 Identity = 378/732 (51.64%), Postives = 406/732 (55.46%), Query Frame = 1
Query: 1 AAPFRSAWERATTRRQAKPTTQRCMGVSSGAGQVAAAGLHNEDAWFSAGSGESHVRGRHKNGGRRAGSGLALAMSAVGRPPQLARPFPATSSLSSYTRPDAHMEARSS-GDVPE--RDLASKQGVSIPGGGVSATGGGGIESSAAPGAGSRRQVAGREARTGMEDAAASATVAADXXXXXXXXXXXXXXXXXXXGGNGDRFGVANEEEKDGDDEWCPRAARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKYRRVTQQSTAARYKHKAXXXXXXXXXXXXXXXXXXXXXXRGPGVRAPTTAVSTSESSKTSTRATTVSAGPPQATAGDARVGNRVQAGRPEETAATGSDTGDDNTSLNLVSASLEASTTPTETQNMGVSPEGPAREDGDPSRLSSTGGGGEGEDVGEKKTAVDTAPAGVA-GDVKPPVRKLGVNGREQAPARVVKEAAPEEAPRLGVISRRETGAVESSGAASSQGGRRLGVLSRGGVQMGGERVAEXXXXXXXDWEE---KEAARTLRRGKLLLHARRGVMEAEELLTTGKLTFPLKRRYVRELRRLK 2175
AAPFRSAWERATTRRQAKP T R + V SGAGQ A+AG NEDA FSAGSG SH R RH+NGG RAG GLALAMSAVGRP QLAR T+SLSSYTRPD H+EA SS GDVP DLASKQGVSIP GVSAT ESSAAPGAGSRR YLAHSGSRLYGTNTAKSDVDL+G+FIPDVQKEEEARRAA+QVKAV +AQQDMGGDTAVPGDAKEARVP+SSSPA+S KG E+TFW+STS+CDSRNT+DDVD+EIISL RFFGQLIR EI GVETLHSMLVRDVELISDPE ASTT E QN VS E PA E GDPSR+SS GGGGEG G+K AVDTAPA VA GD +PPVRKLGV GR++AP RVVK+ APEEAPRLGV+SR TG VES GAASSQG RRLGVLSRGGV+MGGE XXXXXXX KE ARTL+RGKLL+HARRGVMEAEELLT G+L+FPLK RYV ELRRLK
Sbjct: 78 AAPFRSAWERATTRRQAKPATPRLI-VPSGAGQAASAGWCNEDALFSAGSGGSHARRRHRNGGGRAGRGLALAMSAVGRPQQLARLSWPTASLSSYTRPDGHVEAGSSVGDVPGPGHDLASKQGVSIPERGVSAT----RESSAAPGAGSRR------------------------------------------------------------------------------------------------YLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEEEARRAASQVKAVAKAQQDMGGDTAVPGDAKEARVPSSSSPALSPKGSGKGK--EITFWYSTSNCDSRNTVDDVDLEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPE------------------------------------------------------------------------------------------------------------------------------------------------ASTTAAEMQNKRVSAEEPAGEAGDPSRVSSRGGGGEG--AGQKSKAVDTAPAWVAVGDKEPPVRKLGVIGRKKAPTRVVKDVAPEEAPRLGVMSRPGTGDVESRGAASSQGARRLGVLSRGGVKMGGEXXXXXXXXXXXXXXXXXXKETARTLKRGKLLMHARRGVMEAEELLTAGRLSFPLKPRYVEELRRLK 560
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Thioredoxin, (phage-associated n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1CI52_9ZZZZ) HSP 1 Score: 61.6 bits (148), Expect = 2.190e-6 Identity = 43/199 (21.61%), Postives = 81/199 (40.70%), Query Frame = 1
Query: 670 EVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKY 1266
++ L E F E ++Y+ GS+LYGT+ SD D +G+FIP N + + R F F++++ +++N+ DD+D+++ S+ +FF L + E ++ L SM D ++ +D E I+ + +R L S++G+ + Y
Sbjct: 7 DIKNLIEKF----ENEYSCKVVYITKYGSKLYGTDNPNSDTDYKGIFIP-----------------------------------------NKNDVLLKRDLEH--------FNFNSNEKNTKNSKDDIDLQLFSIYKFFNLLKKGETGAMDILFSMFREDTQIYNDQEFTSIIKENYKKFYNRNLHSFVGYCVGQSKVY 152
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: NrdC.11 (n=7 Tax=Biquartavirus TaxID=1912143 RepID=Q56ET2_9CAUD) HSP 1 Score: 60.8 bits (146), Expect = 3.220e-6 Identity = 42/179 (23.46%), Postives = 79/179 (44.13%), Query Frame = 1
Query: 730 IIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKY 1266
+I+ GS LYG NT +SD+D++G+FIPD P D ++V +S S +T + S+N+ DD+D+E+ +L +F + ++ E A ++ LH+ + ++SD I + +R + ++S+M +++ KY
Sbjct: 4 VIFEGLHGSHLYGLNTPESDLDMKGIFIPD------------------------------PKDILLSQVKSSYS-------------------VTTGNDKSKNSKDDIDIEMFTLKQFIHECVKGETAALDMLHTPTDK---IVSDSAIWQFIQSQRSSFYTTNMTSYMSYVMKQAAKY 130
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Sulfurovum sp. bin170 TaxID=2695268 RepID=A0A6M0L1X5_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 6.280e-6 Identity = 39/186 (20.97%), Postives = 79/186 (42.47%), Query Frame = 1
Query: 709 EKHPGATIIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKY 1266
E+ ++Y+ GS+LYGT+ SD D +G+FIP+ + + +K F F+++D +++N+ DD+D+++ S+ +FF L + E ++ L SM D ++ +D E +++ + +R L S++G+ + Y
Sbjct: 11 EQEQNCKVVYVTKYGSKLYGTDNPNSDTDYKGIFIPN------------------------------------------KNDVLLKKDLEH-------FNFNSNDENTKNSKDDIDLQLFSVYKFFNLLKKGETGAMDILFSMFREDTQVYNDKEFTSMMMESYKKFYNRNLHSFIGYCVGQSKVY 147
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aeromonas phage Asfd_1 TaxID=2562462 RepID=A0A4D6BGE4_9CAUD) HSP 1 Score: 59.3 bits (142), Expect = 1.070e-5 Identity = 45/179 (25.14%), Postives = 76/179 (42.46%), Query Frame = 1
Query: 730 IIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKY 1266
+I+ GS LYG NT +SD+D++G++IPD P D V S S +T D S+N+ DD+D+E+ SL +F R E ++ LHS +D ++I+D + + + R + ++S+MG+++ KY
Sbjct: 4 VIFEGLHGSHLYGLNTPESDLDMKGIYIPD------------------------------PRDMLMGSVKKSYS-------------------VTTGDDRSKNSKDDIDIEMFSLYQFIQDAARGETYALDMLHSP--KD-KIITDSSVWQYIQQNRASFYTTNMTSYMGYVMKQAAKY 130
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Uncharacterized (protein nrdC.11 n=9 Tax=Tulanevirus TaxID=2560244 RepID=Q19CU2_9CAUD) HSP 1 Score: 58.5 bits (140), Expect = 1.810e-5 Identity = 44/179 (24.58%), Postives = 76/179 (42.46%), Query Frame = 1
Query: 730 IIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKY 1266
+++ GS LYG NT +SD+D++G+FIPD P D R S S +T + S+N+ DDVD+E+ SL +F + E ++ LHS +D ++I+D + + + R + ++S+MG+++ KY
Sbjct: 4 VVFEGLHGSHLYGLNTPESDLDMKGIFIPD------------------------------PKDILLGRAKRSYS-------------------ITTGNDKSKNSKDDVDIEMFSLQQFILDAAKGETYALDMLHSP--KD-KIITDSSVWQYIHQNRSAFYTTNMTSYMGYVMKQAAKY 130
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Thioredoxin, (phage-associated n=1 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6TKD3_9PROT) HSP 1 Score: 58.2 bits (139), Expect = 2.590e-5 Identity = 40/195 (20.51%), Postives = 81/195 (41.54%), Query Frame = 1
Query: 682 LTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKY 1266
+ + F+E+ ++Y+ GS+LYGT+ SD D +G+FIP D + D + + F++++ ++RN+ DD+D+++ S+ +FF L + E ++ L SM D ++ +D I++ + +R L S++G+ + Y
Sbjct: 3 IKNLIKNFEEEQ-NCQVVYITMYGSKLYGTDNPNSDTDYKGIFIP------------------------YKNDVLLKRDLEH-------------------------YNFNSNEKNTRNSKDDIDLQLFSIYKFFSLLKKGETGAMDILFSMFREDTQIHNDTSFTSIIMENYKKFYNRNLHSFIGYCVGQSKVY 147
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Match: Thioredoxin, (phage-associated n=3 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6SMB3_9PROT) HSP 1 Score: 58.2 bits (139), Expect = 2.620e-5 Identity = 39/195 (20.00%), Postives = 85/195 (43.59%), Query Frame = 1
Query: 682 LTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLRGVFIPDVQKEEEARRAAAQVKAVGEAQQDMGGDTAVPGDAKEARVPNSSSPAVSRKGRXXXXXXEMTFWFSTSDCDSRNTMDDVDVEIISLDRFFGQLIRAEIAGVETLHSMLVRDVELISDPEIVPIVVRERRWMVSRQLSSWMGFILSHIGKY 1266
+ + F++++ ++Y+ GS+LYGT+ SD D +G+FIP+ + D + D + + F++++ ++RN+ DD+D+++ S+ +FF L + E ++ L SM D ++ +D + I++ + +R L S++G+ + Y
Sbjct: 3 IKNLIQNFEQEY-NCQVVYITMYGSKLYGTDNPNSDTDYKGIFIPNRE------------------------DVLLKRDLEH-------------------------YNFNSNEDNTRNSKDDIDLQLFSIYKFFSLLKKGETGAMDILFSMFRADTQVYNDEKFSSIIMENYKKFYNRNLHSFVGYCVGQSKVY 147 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9619.17630.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9619.17630.1 >prot_E_fasciculatus_S2_contig9619.17630.1 ID=prot_E_fasciculatus_S2_contig9619.17630.1|Name=mRNA_E_fasciculatus_S2_contig9619.17630.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=725bp AAPFRSAWERATTRRQAKPTTQRCMGVSSGAGQVAAAGLHNEDAWFSAGSback to top mRNA from alignment at E_fasciculatus_S2_contig9619:767..4862+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9619.17630.1 ID=mRNA_E_fasciculatus_S2_contig9619.17630.1|Name=mRNA_E_fasciculatus_S2_contig9619.17630.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4096bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9619:767..4862+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9619:767..4862+ >mRNA_E_fasciculatus_S2_contig9619.17630.1 ID=mRNA_E_fasciculatus_S2_contig9619.17630.1|Name=mRNA_E_fasciculatus_S2_contig9619.17630.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2175bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9619:767..4862+ (Ectocarpus fasciculatus EfasUO2)back to top |