mRNA_E_fasciculatus_S2_contig959.17606.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA9_ECTSI) HSP 1 Score: 813 bits (2099), Expect = 1.400e-291 Identity = 417/428 (97.43%), Postives = 421/428 (98.36%), Query Frame = 1
Query: 1 MARYGGLFGIMAMAMLSPRCLALVSTELIEESGVSATLVADAFGAAAGGYMHFEVEPTSDWPSNRVAYLVVVAESVTSQYFTTLLEMSDLEADDPPPVCAAPSAGRFEITGHDSFNMSVAHHDRYSAYLVVCDRGGSFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLLTRAFDHSLEQQGS 1284
MARYGGLFGIMAMAMLS CLALVSTELIEESGVSATLVADAFGAAAGGYMHFEVEPTSDW SN VAYLVVVAES+TSQYFTTLLEMSDLEADDPPPVCAAPSAGRFEITGHDSFNMS+AHHDRYS YLVVCDRGGSFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEM+RLRRHVLPVHSLCLACV VKTVQFILRA+YFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQ LPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLLTRAFDHSLEQQGS
Sbjct: 1 MARYGGLFGIMAMAMLSQHCLALVSTELIEESGVSATLVADAFGAAAGGYMHFEVEPTSDWRSNGVAYLVVVAESMTSQYFTTLLEMSDLEADDPPPVCAAPSAGRFEITGHDSFNMSIAHHDRYSPYLVVCDRGGSFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMVRLRRHVLPVHSLCLACVVVKTVQFILRAIYFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQ-LPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLLTRAFDHSLEQQGS 427
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: Lung (seven transmembrane receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN10_9STRA) HSP 1 Score: 259 bits (662), Expect = 1.240e-75 Identity = 162/407 (39.80%), Postives = 232/407 (57.00%), Query Frame = 1
Query: 58 CLALVSTELIEESGVSATLVADAFGAAAGGYMHFEVEPTSDWPSNRV-AYLVVVAESVTSQYFTTLLEMSDLEADDPPPVCAAPSAGRFEITGHDSFNMSVAHHDRYSAYLVVCDRGGSFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHR-QSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLLTRAFDHSLE 1272
C L+ I ++G S+ + FG A GG F+V S R Y+++ S + +F L+ S D VC+APSA RFEI S N++V D+Y+AYL++C + F G VT+T LN P+G+L+Q LPI + LP LYT++ VV+ + A WL ++ R R V+ VH + A V ++ V + A Y++R Q G RL L QV+F+ T L LGWG++R L ++E L+ + + +S +A C C V ++ Y +RSL+MLT VVAINFNI H+R + +PWTSS ALEY+KL +YL++R TFLAYLL+P L V +L WEY W+ L+EF+ +I H+GVTFAP + W +TRA+D SLE
Sbjct: 19 CSGLILQTSISQAGPSSVQLFSDFGLAGGGSAAFDVIMDMSVSSQRARGYIILAGRSAAASFFHPNLKGSP----DWAAVCSAPSAARFEIVSTTSVNVTVPTADQYTAYLLLC-QDLLFAGTVTTTLLNLTPDGELSQQLPIEDSPLPRLYTVVLVVWALVAALWLAQLWRCRAFVIKVHHMFTAVVGLRVVMEAVMAAYWYRLQQPPGSSPSLQRLAS----LLSNADQVLFIFTATLIGLGWGYMRQRLSTQEVRLLAVVFTAQSALSAAEALC--VGGGPLCGIVVMLDYILRSLIMLTMVVAINFNIAHMRAALH-VPWTSSMALEYLKLKQYLTFRWTFLAYLLLPIATLAVQYAVLRWEYLWVGALLEEFLMVVITVHIGVTFAPFNTWFITRAYDQSLE 413
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFX5_9STRA) HSP 1 Score: 182 bits (461), Expect = 7.240e-47 Identity = 129/387 (33.33%), Postives = 194/387 (50.13%), Query Frame = 1
Query: 97 GVSATLVADAFGAAAGGYMHFEVEPTSDWPSNRVAYLVVVAESVTSQYFTTLLEMSDLEADDPPPVCAAPSAGRFEITGHDSFNMSVAHHDRYSAYLVVCDRGG--------SFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTA--AWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAP 1227
G A+ V + FG A GG + E E T P++R+ Y+ + S +++TL +L +C PS R+E TG SF V D+Y+ ++ C GG G+VT L GD H+ + + LY M +++A+ AW + R RRH VH LC + V+ V L A +F GG + D L A + L +FLLT+LL +LGW R SL +E ++ T Y V + A C+ T + C + L Y +RSL+ML ++A+NFNITH+R I PW S Y +L+++ S+R TFLAYLL+PT++L+ + ILSW ++W+ + E + + H+G TF P
Sbjct: 43 GNVASPVFERFGFAEGGVIEMEAEVT---PNDRIVYVALFRRSDWEAWYSTLSRSRNLLLQ----MCQFPSTMRYEATGKFSFRYEVRDQDQYTLQVLACRVGGRSDPMAPTQVTGYVT---LKNPALGDGHAHMSLEMYGVDTLYFAMLGLHLAMLGYWAWATMIARTRRHRRQVHVLCFVLLIVRCVDLALSAAHFVSL---GGTPEVDLPLFKAHQIASALATALFLLTMLLIALGWKITRASLTGRELQMLVGTFVVYTVVGVAVAFCETTAA---CGALQLAEYVLRSLLMLGIIIAMNFNITHVRATIHDSPWAPSLPAAYKRLNQFHSFRWTFLAYLLLPTLILIFQITILSWSFEWVSTLMGELLLLYVYTHVGFTFRP 413
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM84_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.240e-37 Identity = 117/413 (28.33%), Postives = 196/413 (47.46%), Query Frame = 1
Query: 94 SGVSATLVADAFGAAAGGYMH--FEVEPTS-DWPSNRVAYLVVVAESVTSQYFTTLLEMSDLEADDPPPVCAAPSAGRFEITGHDSFNMSVAHH---DRYSAYLVVCDRG---GSFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLLTRAFDHSLEQQGS*RRHTHA 1305
SG+ + FG A GG + + V P + PS+ L++++ ++ L + + +C P+ R EI G S + + D+YS ++ C G +T N PE D H PI Q M + ++Y + G++ R+ +H + L + + ++ Y++ + G + L A +F V +FLL+LLL S+GW IR SL KE L+ I IG Y + A C +++ ++ C + L+ + ++SL++L ++A+NF++T +R + PW S+ L+Y + +Y +R+ FL YLL+PT L+ V WE WI L + + +I H+GVTF+PL LL RAFD S+ Q + H A
Sbjct: 25 SGIFGDFIVTDFGMAVGGVVEVDYNVRPQNVSAPSDSYLLLLIMSSDQKDGWYGGLDKSDTDVTQNINNLCNQPAMLRREIFGSGSIKFDIDYAVGLDQYSVGVLQCREGYTSNPVSVDLTLNMKNARPESDSYSHFPIEQVMEVRVLQGELILYALMILGMCGQLYVAGRYARHIHYVFLLTLVTTFIYVSIKYGYYYD---YNRTGSTNTSLMIAQNVFGVFSNGMFLLSLLLLSVGWTMIRSSLLEKEVQLIQIGIGAYFAFGIAGAVCINSSDTT-CQALDLVPFIIQSLILLGVIIAMNFSVTQLRAMVYNSPWVPSTPLQYARHQQYHVFRLVFLLYLLLPTAFLIFRVSQFGWEEAWIGFVLTDLLDIALIFHIGVTFSPLHEVLLIRAFDGSVIGQEPAQPHPRA 433
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKD3_HETAK) HSP 1 Score: 120 bits (302), Expect = 1.860e-27 Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 1
Query: 751 FLLTLLLFSLGWGFIRPS--LRSKEGWLVTITIGFYAGVSLIDASCDDT-NSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLLTRAFDHSL 1269
FLL LLL +LG+ RP+ LR +EG + YA ++ A C + N + C L Y RS++ML +VA NFNI H+R + PW++ AL Y L+ Y +R F+AYLL+PT LL+V + +L+WEYDW +E L+ H G TFAP DP R FD SL
Sbjct: 36 FLLALLLLALGYAVNRPTRGLRGREGRALGGAFTLYAALAAALAGCGNRQNDTDLCRAFLLAEYVARSMLMLFIIVAANFNIHHLRLGLASSPWSAGLALTYRHLADYTRFRWAFIAYLLLPTALLVVQMTLLTWEYDWCAPLAEEAFLVLLYCHAGATFAPGDPAAAARPFDGSL 211
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUH6_SAPPC) HSP 1 Score: 112 bits (280), Expect = 1.120e-22 Identity = 81/271 (29.89%), Postives = 136/271 (50.18%), Query Frame = 1
Query: 454 EGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQL--PWTSSSALEY-VKLSRYLSYRMTFLAYLLMPTVLLMVSVFILS----WEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLL 1245
+G +T+HL ++Q L +Y +M+ +V +T W + LR R +H + C+ V+T + +++ ++ V G L + + V LL LLL SLGW R L E +V Y V++ A+CD N C G L Y ++SL++L ++ +N++I ++ ++ WT S + V+L+ YLS R +FLAYLL+PT +LM+++ +++ W Y W +E V I HLG+ P+ P L
Sbjct: 166 DGRVTEHLGVDQLGLLPVYMIMTAAFVLMTTLWGIDCLRKERPTYAIHGVFGLCLVVRTFECMIKLWHYR---VLSKSGRTRSYLSVGKDMCEHMTTTVLLLFLLLSSLGWSMRRRYLTQSERRIVQACFVLYVFVAMTKATCDSRNQV--CQGYMLTEYVLKSLMLLGIIITLNYSIAQLQTKLENEYGRWTESKIPKMQVRLNLYLSLRYSFLAYLLLPTAVLMINLTVINPPGTWRYVWATYVFEEVVMACIFTHLGLVLRPVHPMTL 431
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: GpcrRhopsn4 (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVK8_9STRA) HSP 1 Score: 103 bits (257), Expect = 9.690e-20 Identity = 70/271 (25.83%), Postives = 136/271 (50.18%), Query Frame = 1
Query: 454 EGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGD---RDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSALE-YVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILS----WEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWL 1242
+ L++H+ + + L +Y+++ V Y +W+ + L+ R + ++ + A + +TV + + Y+ SV G E + R + +V V+FL L+L SLGW + R L S+E ++ Y V+LI ASCD C L YA++SL++L ++A+N++I+ + + W + Y +L +R +FL YLL+P+ +L+ ++ +++ W++ W+ ++E + F I H+ P+ P L
Sbjct: 168 DNTLSEHMGVEELGLIPIYSVLVVTYALGAISWIYDCLKKRHYSSGINLVFAASLVAETVHCLSKLAYYRAFSVDGNEHSVYAKFRDISESVS------NVIFLAFLMLCSLGWSWTRRYLNSQERRFFSVLFAMYLTVALIKASCDP--KLQMCQAYMLTEYALKSLMLLGIIIALNYSISRLHVKLDGTRWQGDKIPKLYARLELLRQFRWSFLVYLLLPSFVLIFNIGVINPPGTWKFFWVSCLVEELIMFGIYCHMAYALRPISPEL 430
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: GpcrRhopsn4 (domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFJ3_9STRA) HSP 1 Score: 101 bits (252), Expect = 4.150e-19 Identity = 76/304 (25.00%), Postives = 149/304 (49.01%), Query Frame = 1
Query: 340 SFNMSVAHHDRYSAYLVVCDRGGSFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSA-LEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFIL----SWEYDWIYVALDEFVRFLIIAHLGVTFAPLDP 1236
++ + +A +Y+ + C +F + + +N + +L++H+ + Q L LY +++ +Y T AWL + L ++ ++ + A + + + + +Y+ S +G E ++ A +F VF+ L+L ++GW + R L E ++ + Y+ V+ I A+C + C L YA++SLVML ++A+N+NIT ++ + W + + Y L ++R++F+AYLLMP+V+++V+ +L SW W +E I HL T P+ P
Sbjct: 131 TYKIQIAASSQYTFQVESCTMQNNFVN-ASISMVNLGWDNELSEHMGVEQLGLIPLYKVVTAMYALGTVAWLADCLVKTKYTPTINFVLAAALVGEAAKATTKLLYYKDFSANGIEHS---VVATARNVFEGATDTVFMSFLVLCAMGWSWSRRKLTLPERRFFSMVLVLYSTVATIKATCSAKEPT--CQAYFLTEYAIKSLVMLGIIIALNYNITRMQMHSDGMRWHGDNVPVHYACLELLRNFRLSFVAYLLMPSVVVLVNAGLLLPPGSWRLHWASCMNEELFMLGIYCHLAYTLRPMSP 428
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: GpcrRhopsn4 (domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ29_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.700e-18 Identity = 87/355 (24.51%), Postives = 168/355 (47.32%), Query Frame = 1
Query: 295 CAAPSAGRFEI----TGHDSFNMSVAHHDRYSAYLVVCDRGGSFY-GHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGDR--------DRLLGAAVVLFIVL------------FQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNIT---------HIRFCIQQLPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILS----WEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLL 1245
C PS R T F + +Y+ + C +F HV N +G L++HL I+Q L LY +M+VV++ +T W + +R + V ++ + AC+ + ++ ++ ++++ S +G +++ + F++L F+ + LT +L W R L S+E LV Y V+++ A+C+ + + C G L Y ++SL++L ++ +N++I+ H R+ ++P T + +L+ +LS R +FLAYLL+PTV+LM+++ +++ W W+ ++EF I+ HL ++ P+ P L
Sbjct: 107 CMYPSEVRIPFDPRATNESIFTYKITSPSQYTLQIESCTPTYNFVQAHVVMK--NIASDGTLSEHLGIDQLGLVPLYGIMTVVFILMTIIWTIDTIRQPKSVHAINKIFGACLLARALECSIKWWHYNQYSQNGLGNSLLSITKDVCEQITTTLFLAFLLLSYPFYHFGFGIDFKAYYFLTSILHR--WSMRRRFLSSRERRLVQAVFVLYFVVAMVKATCN--SGTELCQGYILTEYVIKSLMLLGIIITLNYSISKLQTKLESDHGRWSESKIPKTQA------RLNLFLSLRWSFLAYLLLPTVVLMLNLGVVNPPGTWRNLWVTFLIEEFATLCILFHLAISMRPIHPTTL 449
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Match: Aste57867_8284 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJT4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.660e-17 Identity = 78/321 (24.30%), Postives = 154/321 (47.98%), Query Frame = 1
Query: 334 HDSFNMSVAHHDRYSAYLVVCDRGGSFYGHVTSTF--LNRVPEGDLTQHLPINQAMLPALYTLMSVV-------------YVALTAAWLGEMLRLRRHVLPVHSLCLACVFVKTVQFILRAVYFHRQSVHGGEGDRDRLLGAAVVLFIVLFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQQLPWTSSSALE-YVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILS----WEYDWIYVALDEFVRFLIIAHLGVTFAPLDP 1236
+ ++ + + +Y+ + C S HV ++ +N + L++H+ I Q L +Y M VV Y A + W+ + + R++ ++ + A + + V+ + +Y+ S G E + G + + +FL L+L SLGW + R + ++E I Y VSL+ A+CD + C L YA++SL++L ++A+N++I+ + + + W + + Y +L+ ++R +FLAYLL+P+ +L+ +V +++ W++ W ++E F I AHL T P+ P
Sbjct: 126 NSTYKIQIGRSSQYTLQVESCT---SLVNHVNASISMVNMGWDSTLSEHMGIEQLGLIPIYMGMLVVAPALTRVVVLLAAYAAFASWWIFDCMTQRQYAPGINIIFAATLVSEMVECFSKVLYYRNFSATGREHS---MFGRFRDVTESISSSIFLGLLMLCSLGWAWTRRYVNTQERRFFLILYLMYLAVSLVKATCDAKRQT--CQAYMLSEYALKSLMLLGVIIALNYSISRLHVKLDETRWQGTKIPQLYTRLNLLRNFRWSFLAYLLLPSFILIFNVGVINPPGTWKFLWASYLVEEMFMFGIYAHLAYTLRPIPP 438 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig959.17606.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig959.17606.1 >prot_E_fasciculatus_S2_contig959.17606.1 ID=prot_E_fasciculatus_S2_contig959.17606.1|Name=mRNA_E_fasciculatus_S2_contig959.17606.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=429bp MARYGGLFGIMAMAMLSPRCLALVSTELIEESGVSATLVADAFGAAAGGYback to top mRNA from alignment at E_fasciculatus_S2_contig959:12572..19163+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig959.17606.1 ID=mRNA_E_fasciculatus_S2_contig959.17606.1|Name=mRNA_E_fasciculatus_S2_contig959.17606.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6592bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig959:12572..19163+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig959:12572..19163+ >mRNA_E_fasciculatus_S2_contig959.17606.1 ID=mRNA_E_fasciculatus_S2_contig959.17606.1|Name=mRNA_E_fasciculatus_S2_contig959.17606.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1287bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig959:12572..19163+ (Ectocarpus fasciculatus EfasUO2)back to top |