mRNA_E_fasciculatus_S2_contig9571.17589.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9571.17589.1
Unique NamemRNA_E_fasciculatus_S2_contig9571.17589.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: DEAD (box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP9_ECTSI)

HSP 1 Score: 595 bits (1534), Expect = 4.580e-206
Identity = 324/335 (96.72%), Postives = 325/335 (97.01%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRGGGGXXXXXXXXAETVVRSFKRQRMGGXXXXXXXXXXXRGGRR 1005
            QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASL+NPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPY CDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRGGGG        AETVVRSFKRQRMGGXXXXXXXXXXXRG RR
Sbjct:  517 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLKNPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYVCDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRGGGGDGGED---AETVVRSFKRQRMGGXXXXXXXXXXXRGKRR 848
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y335_9STRA)

HSP 1 Score: 466 bits (1199), Expect = 2.970e-163
Identity = 232/283 (81.98%), Postives = 260/283 (91.87%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREA 849
            Q+VALA KPHVVIATPGRLVDHLENTKGF+L T K+LVLDEADRML MDFEEEINK+L V+PR+RRT LFSATMTSKV KLQRASL NP +VEV++KFSTP +LVQQYLFIPAK+KDCYLAYVLNEFAGQ+ +VFVSTCN AQRVALLLRNLGFQA+CLHGQM QPKRLGAL KFKSG R +L+ATDVASRGLDIPSVDLV+N +IPSHGKDYIHRVGRTARAGR+GRSIAFVTQYDVEVYQR+EA++G++LP Y C+E+ VLV+ ERV EAQR+A REMREA
Sbjct:   12 QAVALAKKPHVVIATPGRLVDHLENTKGFNLNTVKFLVLDEADRMLSMDFEEEINKILQVIPRDRRTLLFSATMTSKVVKLQRASLTNPIKVEVSSKFSTPVSLVQQYLFIPAKYKDCYLAYVLNEFAGQTALVFVSTCNAAQRVALLLRNLGFQAICLHGQMSQPKRLGALNKFKSGARPILVATDVASRGLDIPSVDLVLNFDIPSHGKDYIHRVGRTARAGRSGRSIAFVTQYDVEVYQRLEAMLGKQLPAYPCEEDMVLVMLERVSEAQRLANREMREA 294
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: Hypothetical (protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXP7_9STRA)

HSP 1 Score: 457 bits (1176), Expect = 2.740e-157
Identity = 225/286 (78.67%), Postives = 254/286 (88.81%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFN 858
            Q++ LA +PHV++ATPGRL DHL+NTKGFSLR  KYLVLDEADRML MDFEEEINK+L+V+PRER T+LFSATMTSKVAKLQ+ASL NP +VEV+NKF TPKTL QQYLFIPAK KDCYL+Y+L+EF GQSTIVFV+TCNNA RVALLLRNLGF AVCLHGQM Q KRLGAL KFKSGQRN+L+ATDVASRGLDIP+VDLV N +IPSHGKDYIHRVGRTARAG+AGRSIAFVTQYD+E YQR+E +I QKLP +  DEETVL+L ERV EAQR+A +EMRE   N
Sbjct:  130 QAIVLAKRPHVIVATPGRLADHLQNTKGFSLRNLKYLVLDEADRMLSMDFEEEINKILAVIPRERNTYLFSATMTSKVAKLQKASLNNPVKVEVSNKFQTPKTLSQQYLFIPAKWKDCYLSYILDEFKGQSTIVFVATCNNALRVALLLRNLGFNAVCLHGQMNQAKRLGALNKFKSGQRNILVATDVASRGLDIPNVDLVCNYDIPSHGKDYIHRVGRTARAGKAGRSIAFVTQYDIEAYQRLETMIQQKLPEFKTDEETVLILLERVNEAQRLATKEMREMQEN 415
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: Dead (deah box rna n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSS5_9STRA)

HSP 1 Score: 453 bits (1166), Expect = 2.550e-155
Identity = 226/284 (79.58%), Postives = 259/284 (91.20%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLP--RERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMRE 846
            Q++ALA KPHVV+ATPGRLVDHLENTKGF +R A++LVLDEADRML MDFEEEINK+L+++P  + RRT LFSATMTSKVAKLQRASL +P +VE ++KF+TP+TLVQQYLFIPAK+KDCYLAY LNE AGQ+ +VFV+TCNNAQR+ALLLRNLGF A+CLHGQM QPKRLGAL KFKSGQR++LIATDVASRGLDIP+VDLV+N +IPSHGKDYIHRVGRTARAGRAGRSIA VTQYDVEVYQR+EAL+G KLP Y  DEETVL+L ERV EAQR+AARE+RE
Sbjct:  145 QAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRE 428
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: DDX47 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RT96_SYMMI)

HSP 1 Score: 444 bits (1143), Expect = 5.250e-152
Identity = 217/290 (74.83%), Postives = 259/290 (89.31%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFNKKGK 870
            Q++ALA +PH+V+ATPGRLVDHL++TKGFSLRT K+LV+DEADRML MDFEEE+N++L+V+PRER T+LFSATMT KVAKLQ+ASL +P +VEV+NKF TPKTLVQQYLFIPAK KDCYLAYVL+EF GQSTI+FV+TC+NA RV ++LR LGF A+CLHGQ+ QPKRLGAL KFKSG RN+L+ATDVASRGLDIP+VD V+N +IPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVE YQR+E LIGQ+LP +  DE+TVLVL ERV EAQR+A++++RE +    GK
Sbjct:  146 QAIALAKQPHIVVATPGRLVDHLQHTKGFSLRTLKFLVMDEADRMLSMDFEEELNQILAVIPRERATYLFSATMTQKVAKLQKASLTDPVKVEVSNKFQTPKTLVQQYLFIPAKWKDCYLAYVLDEFKGQSTIIFVATCSNALRVTMVLRALGFGAICLHGQLSQPKRLGALNKFKSGLRNILVATDVASRGLDIPNVDFVLNFDIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEAYQRLETLIGQRLPEFPADEQTVLVLLERVTEAQRIASKDIREMESTAGGK 435
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS8_GLOUD)

HSP 1 Score: 441 bits (1135), Expect = 1.200e-150
Identity = 216/296 (72.97%), Postives = 257/296 (86.82%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFN-KKGKHRGGG 885
            Q VALA KPH+VIATPGRLVDHLENTKGFSLRT +YLVLDEADRML MDFEEEIN+++ ++P ER T+LFSATMTSKVAKLQRASL+NP +VE+ +KF+TP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RN+L+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +++FVTQYDVE+YQR+E L+G+KL  Y C+E+TVLV+ ERV EAQRMA  EM+E+D   K+G++  GG
Sbjct:  139 QQVALARKPHIVIATPGRLVDHLENTKGFSLRTMRYLVLDEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVAKLQRASLKNPVKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMTQPNRLGALNKFKAKSRNILVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGTAVSFVTQYDVELYQRIEHLLGKKLDTYPCEEDTVLVMSERVNEAQRMATIEMKESDTGGKRGRYTRGG 434
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GTT0_PHYRM)

HSP 1 Score: 439 bits (1128), Expect = 2.180e-149
Identity = 218/293 (74.40%), Postives = 253/293 (86.35%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRG 879
            Q VALA KPHVVIATPGRLVDHLENTKGFSLRT K+LVLDEADRML MDFEEEIN+++ ++P ER T+LFSATMTSKV KLQRASL++PA+VE+ +KF+TP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +I+FVTQYDVE+YQR+E L+G KL  Y+C+EETVLV+ ERV EAQR+A  EM+EA  N  G  RG
Sbjct:  140 QQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVRKLQRASLKDPAKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMTQPNRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQYDVELYQRIEHLLGTKLDAYSCEEETVLVMSERVNEAQRIATIEMKEAAANGTGTKRG 432
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BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP34_9STRA)

HSP 1 Score: 450 bits (1158), Expect = 2.520e-149
Identity = 227/292 (77.74%), Postives = 259/292 (88.70%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFNKKGKHR 876
            Q+VALA +PHVVIATPGRLVDHLENTKGF+LR  K+LVLDEADRML MDFEEEINK+L+V+PRER T+LFSATMTSKVAKLQRASL +PA+VEVA++F+TPKTLVQQYLFIPAK+KD YLAYVLNE AGQS I FV+TC  AQR ALLLR LGF A+ LHGQM QPKRLGAL +FK+G R+VL+ATDVASRGLD+P+VD V+N ++P +GKDY+HRVGRTARAGRAGRS+AFVTQYDVEVYQR+EALIG+KLP Y  DEE  LVL ERV EAQR+AARE+READ  K GK R
Sbjct:  516 QAVALAKRPHVVIATPGRLVDHLENTKGFNLRAIKFLVLDEADRMLSMDFEEEINKLLAVIPRERNTYLFSATMTSKVAKLQRASLRDPAKVEVAHRFTTPKTLVQQYLFIPAKYKDVYLAYVLNELAGQSVIAFVATCAGAQRAALLLRALGFGAIALHGQMSQPKRLGALSRFKAGARSVLVATDVASRGLDLPAVDAVLNFDLPPNGKDYVHRVGRTARAGRAGRSVAFVTQYDVEVYQRLEALIGRKLPAYPADEEAALVLLERVSEAQRVAARELREADMGKGGKKR 807
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: Dead (deah box rna n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AF22_PLAHL)

HSP 1 Score: 436 bits (1121), Expect = 1.210e-148
Identity = 216/293 (73.72%), Postives = 251/293 (85.67%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRG 879
            Q VALA KPH+VIATPGRLVDHLENTKGFSLRT KYLVLDEADRML MDFEEEIN+++ ++P ER T+LFSATMTSKV KLQRASL+ P +VE+ +KF+TP+TL Q YLFIPAK+KDCYLAY+LNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +I+FVTQYDVE+YQR+E L+G KL  Y C+EETVLV+ ERV EAQR+A  EM+EA  N  G  RG
Sbjct:  139 QQVALARKPHIVIATPGRLVDHLENTKGFSLRTMKYLVLDEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVRKLQRASLKEPVKVEITHKFATPETLKQHYLFIPAKYKDCYLAYLLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPSRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQYDVELYQRIEHLLGTKLNAYPCEEETVLVMLERVNEAQRIATIEMKEAAANGTGTKRG 431
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZC0_9STRA)

HSP 1 Score: 437 bits (1124), Expect = 1.220e-148
Identity = 216/294 (73.47%), Postives = 253/294 (86.05%), Query Frame = 1 
Query:    1 QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYACDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRGG 882
            Q VALA KPHVVIATPGRLVDHLENTKGFSLRT K+LVLDEADRML MDFEEEIN+++ ++P +R T+LFSATMTSKV KLQRASL++PA+VE+ +KF+TP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +++FVTQYDVE+YQR+E L+G KL  Y C+E+TVLV+ ERVGEAQRMA  EM+EA  N  G  + G
Sbjct:  156 QQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPADRNTYLFSATMTSKVRKLQRASLKDPAKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPNRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAVSFVTQYDVELYQRIEHLLGAKLDSYPCEEDTVLVMSERVGEAQRMATIEMKEAAANGTGSFKRG 449
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9571.17589.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
DEAD4.580e-20696.72box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
Hypothetical2.970e-16381.98protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Hypothetical2.740e-15778.67protein n=1 Tax=Chromulina nebulosa TaxID=96789 Re... [more]
Dead2.550e-15579.58deah box rna n=3 Tax=Monodopsidaceae TaxID=425072 ... [more]
DDX475.250e-15274.83protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Uncharacterized1.200e-15072.97protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized2.180e-14974.40protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GT... [more]
P-loop2.520e-14977.74containing nucleoside triphosphate hydrolase prote... [more]
Dead1.210e-14873.72deah box rna n=2 Tax=Peronosporaceae TaxID=4777 Re... [more]
Uncharacterized1.220e-14873.47protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9571contigE_fasciculatus_S2_contig9571:491..5104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score599.0
Seed ortholog evalue1.4e-168
Seed eggNOG ortholog2880.D7FYP9
Preferred nameDDX47
Model size1008
KEGG koko:K10352,ko:K14777
KEGG Pathwayko04530,map04530
Hectar predicted targeting categoryother localisation
GOsGO:0000339,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006413,GO:0006518,GO:0006725,GO:0006807,GO:0006915,GO:0007154,GO:0007165,GO:0007166,GO:0008026,GO:0008135,GO:0008150,GO:0008152,GO:0008186,GO:0008219,GO:0008380,GO:0008625,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0012501,GO:0016070,GO:0016072,GO:0016281,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0022613,GO:0023052,GO:0030490,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0042623,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097190,GO:0097191,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons7
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0330@2759
EC3.6.4.13
Cds size1008
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9571.17589.1prot_E_fasciculatus_S2_contig9571.17589.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9571 491..5104 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842603.8747363-CDS-E_fasciculatus_S2_contig9571:490..6381696842603.8747363-CDS-E_fasciculatus_S2_contig9571:490..638Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9571 491..638 -
1696842603.8904467-CDS-E_fasciculatus_S2_contig9571:1435..15901696842603.8904467-CDS-E_fasciculatus_S2_contig9571:1435..1590Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9571 1436..1590 -
1696842603.9003026-CDS-E_fasciculatus_S2_contig9571:2026..21401696842603.9003026-CDS-E_fasciculatus_S2_contig9571:2026..2140Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9571 2027..2140 -
1696842603.9110284-CDS-E_fasciculatus_S2_contig9571:2450..26121696842603.9110284-CDS-E_fasciculatus_S2_contig9571:2450..2612Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9571 2451..2612 -
1696842603.9283898-CDS-E_fasciculatus_S2_contig9571:3214..33701696842603.9283898-CDS-E_fasciculatus_S2_contig9571:3214..3370Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9571 3215..3370 -
1696842603.938457-CDS-E_fasciculatus_S2_contig9571:4146..42751696842603.938457-CDS-E_fasciculatus_S2_contig9571:4146..4275Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9571 4147..4275 -
1696842603.949086-CDS-E_fasciculatus_S2_contig9571:4960..51041696842603.949086-CDS-E_fasciculatus_S2_contig9571:4960..5104Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9571 4961..5104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9571.17589.1

>prot_E_fasciculatus_S2_contig9571.17589.1 ID=prot_E_fasciculatus_S2_contig9571.17589.1|Name=mRNA_E_fasciculatus_S2_contig9571.17589.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=336bp
QSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDF
EEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLENPARVEVANKFST
PKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLR
NLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDL
VVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQ
KLPPYACDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRGGGGGGGD
GGEDAETVVRSFKRQRMGGRGGGRGGGRGGRGGRR*
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mRNA from alignment at E_fasciculatus_S2_contig9571:491..5104-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9571.17589.1 ID=mRNA_E_fasciculatus_S2_contig9571.17589.1|Name=mRNA_E_fasciculatus_S2_contig9571.17589.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4614bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9571:491..5104- (Ectocarpus fasciculatus EfasUO2)
CAGTCGGTAGCGCTGGCCCTGAAGCCGCACGTGGTGATTGCCACGCCAGG
GCGCCTGGTGGATCACCTGGAGAACACGAAGGGCTTCAGCTTGAGGACGG
CCAAGTACCTCGTGTTGGACGAGGCGGACAGGATGCTCGGCATGGTGAGT
TTCTGCTCGACGACATCTTCCGACAAACAAGGGTACTATTGAGTATGATG
GGAGGAATGAGTCGTGAGCGGGCGCCGTGCTGCTGCTGCAGTAGGCGGGG
GGCATAGCTCACCCCCAGACCTCTCGCCCGTGCTTCAGTTGGTAGCCTCG
TCAAACCTGGCTCTACTGTAGGTAGGTTTTGGGTTCAGAACCTCTCTGGA
GCGACAAAATCTCGCAATGTCATGGAAATGCACATCGTTGTGCGTTAACA
CGATCAACAGGGAAAGGGTCCGCTGAATATACCGTTCTAGCGATGGGGTT
TGACGTGGGGGGGAAAGCCGACAAACAAGCAAATAAATCTGCAAACCTGT
TGTTGTGCTCCCGTTCCTTCGGTGCGTCCAACATATACCGAAAGGTGTTA
TTGTTGTTGTCGTCTTCACATTGACATTGAGAGCCGTTCCGGTCTCCGCT
CCGTTTTTGTTGTTTTTGGTTGTCTTCACATTAAGAGCCGTTCCGATCTC
TCTACCCATTTGCCTTCATCCGTCCGTACTGATCAAACACTTGACCGATC
GCTTCGCTCCGTACCTTCTATTCAATATCCATACTGGTCCCGACGCGAAC
GCCTTAGACTGGGGGGCCAGACTGTACGGAACGAAACACACACAAGTGAC
GTTTTCGTTTATATTTTTTCGTTTTTCAGGACTTCGAAGAGGAGATCAAC
AAGGTGCTCAGCGTGCTTCCGAGGGAGCGTAGAACGTTCCTCTTCAGCGC
CACCATGACGTCGAAGGTTGCCAAGCTGCAGAGGGCCTCTCTCGAGAACC
CCGCCAGGGTAAGAGGCTGTTGTGGTTGTTGTCTGGTACACGGTAAAACC
GTTCCGGTCGCAGCTCGGTAATATTCCTACTGGTCCAATTGAAGATACTG
CTGTTGTTGCCGGTACACGGTAAAACCGTTCCGGTCGCAGCTCGGTAATA
TTCCTACTGGTCCAATTGAAGATACTGCTGTTGTTGCCGGTACACGGTAA
CACCGTTCCGGTCGCAGCTCGGTAATATTCCTACTGGTCCAAATGAAGAG
ACTGTGTTGTTGCCGGTACACGGTAACACCGTTCCGGTCGCAGCTCGGTA
ATATCCGTACTGGTCTACCTGACGCGGAACGTCTTCAATGGTCACAGAAG
CCAACTACCCCCCAAAAAAGGGGTACACCTTGCTAGAAATCAAAGAACCG
AATCAGAGAATAGATCCACGGGAAAAAAACCCAAACGCGATATTAGCACA
TCACAAGATGACCAAACCGGGAGACGAGCGAACCCGGCAAAAAAGAGTAC
GGACGGAGAAATCAAATTTACCGCGGTGAACGGGGGGATGATCATGGCCG
TGTTCCTGCAATAGAGAGGAAGGAGCGAACGCGTGATGGTTAAGCTCGTG
ATTCAATGAGCTGCGGCGAGCCAGTTCTACTCTATTCTAGTCCAATAGAG
GGCCAAGCAAAGTTGGGAGCAAGAGGGAGAAGGTATGTATGGCGCACTGC
GACAAGCCTTGTAGCTTTAGCAGCCGCTAAGCGCGTGTACTCGTTGCCTC
TATATTTCCATGAAAAACAATTCGCTCAACACAGGTGGAAGTCGCGAACA
AGTTCTCGACTCCGAAGACCCTGGTGCAGCAGTACCTCTTCATCCCGGCC
AAGCACAAGGACTGCTACCTCGCCTACGTGCTGAACGAGTTCGCGGGGCA
GAGCACGATCGTGTTCGTGTCCACGTGCAACAATGCTCAGGTATGTTTGT
GTCGTTGTGAGCGACCGGCATCAACGTCGATTCGTCCGATTTTGTTCCTG
TGTCGATTGGAGGGTCGAACGGCTGCTTTGCTTTTACTGCATGCCCCTCG
GACGCTCAGCAAAATGAACACCATTCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGCGCTGTTTTTTTTGTTTT
GGGTGCACACTTTTTTTTCTACAGAAAAAAACAAAACAGGNNNNNNNNNN
TTTTGTTTCTGTGTCGGTTGGGGGGTCGGACGGCTGCTTTGCTTTTTCTG
CCTGCCCCCCGGGCGCCCAGAAAAAAAAACACCCTTCCCCCCCCCCCCCC
CCCCTCGATCCCCCTGGGCCCCCTCTCTGTCCCGGAAAGGGATTATGGTC
TTTGCAGCGTGGAATACAATTTGTACCGAAGGCAAAGCAACAAGTGGGTA
CGAACCCGTCCCCCCTTGCACATGCGTACTACGTAGAGCGCGAAAAAAGT
CTACAGTTTTGTCCCGCCCCCCACAGCAGTTTGTGAGTTCAACCTCCTGC
CCCCCCCCCCCCCCCCCCCCCCCTTGAATCTGTGTTCCCAAGCGCGTGGC
CCTGCTTCTGCGGAATCTGGGTTTCCAAGCGGTTTGCCTGCACGGGCAGA
TGGGGCAGCCGAAGAGACTGGGGGCGCTGGGAAAGTTCAAGTCGGGGCAG
AGGAACGTCCTCATCGCGACGGACGTGGCCAGCCGCGGGCTCGACATACC
CTCGGTGAGCGAGGAGCGCGGTGGGGGTGGGTGGGTGGGTGCGTGGGTAC
TCAAGTAAGCGCGTAAGCCGTAGCCGTTAGACCCATTGATCTCGCATCCC
CTTCAAAGCCGGGACGGAGCGATCGATAAGTTGGGGTTTCGCCGCGTTCT
AAATGCCCTGTTCGCGCTGTCGTTCTCTTCATGTCCCGTTCGGTCGGCAT
GGATCTTGCTTGCTTCGGTGTCACGTATCCATGCAACGAGCCCCTGACCC
ATCAGCCCATGGTCGATGTCGTTGTCGTCCGTCGTTGTTGGCTGCTGCTG
CTACTGCTGTCCAGGTCGACCTGGTGGTTAACATGGAGATCCCCAGCCAC
GGCAAGGACTACATCCACCGAGTGGGGAGAACCGCGAGGGCTGGAAGGGC
CGGGCGCTCCATCGCCTTTGTCACACAGGTGTGTATGCATATGCCGATCA
TCGATACTAGTGGCTGTTTTTATACGACGAAGTGCTGTGTATCGATGTTG
TCCGCGGGAGTCTGGGGCGTTTGGTCAGGTAGGGTATTGTCCCTCCTCCT
CCACCCCTCGTCAAGATAGTCGTTTATTTGATCCAAGTACAATAAAACCA
ACCCCAGACCATAAGACATGACGGTATATAGTGAGTGGAGGCGTTTATCG
GGTTCATCCATAGCCTCGTACCCCCCCCCCGCCTCCCTCCAAATACCTTC
GGCAAGTAGGAAAGAACGATTGGCCATGATCAGTCCTGTGGGAACAATGC
TCCGTCCTATCGAGAGAATGGTCAGTGGTCTAACAACTAAGGCATGCCAA
ATATGAGTACCCCCCCCGTCCCCTCCCCCACCAACACCGCCCATTATTTT
CTGCTTGTTTGTAGTATGACGTGGAGGTGTACCAGCGTATGGAGGCGTTG
ATCGGACAGAAGCTCCCGCCGTACGCGTGCGACGAGGAGACGGTCCTGGT
TCTCCAGGAGCGCGTGGGAGAGGCGCAGAGGATGGCGGCGAGGGAGATGC
GCGAGGCGGACTTCAACAAGTACGTATTATTGGACAGTGGGGGGGGGCTC
AGGTAGTGCTGGTATGTGCCCGTCAGATTCACCGGCACTTTGTCGGGCAC
CCGGCACTACTTACCGTGCAGAGAATGAGACCACTTGAGTATTCCGTCCG
TGTTGACGCGATTTCCCCGATGGCACTATAACCGGGCAGTGGCACTATTG
AGGGACCCCCGCTGTACTGTACCATCCCCGTGGTTCCCCCGACAAAGAAA
AAACGGACAAAGGGAGTGCATCTGTTTCTTGTGCCCGTGCTCCAGCTTCC
TGGACAGCAAAATAAACAACATATTTGGATATTTGGAGGTTGTTAGATTT
TTGTATTAGTTGCTGCGGTATAGGTTATTGTTGTTCGTTCTTGTCTCGGC
AGAAAAAAAAGGAAACGTCTTGTACTAAATACCCTCCGTCCCACAATACT
CCTACTACTTGGCGCCTCATAAAAACATAAAAACGAGTTCCCGTGTAGGC
AGAAGTATGTAAATATGTAAATATATACCGAGGGAAGACGATTAAGCACT
TTCGAGTCCTAAACAGGAGAGGAGAGTGTGTGTGGTTTTTCGGTCGACAG
ACCTGGCTGCACAAGAAATCTTGTGATCCAACACGAGCGAGTTTCAGTTG
ATAATCTCTGTCATGTAAATGTTCCATATTTTCAGCTCGCGACATTTTCA
ATCCGTCTTGTTATGGCCCTATCTTGGCTACAACTACTCCAAGGGGGACT
CCAGACCCTCCAACTCTCCCGTTACCGCTGACCGTCTCCTGTTCGCTCGG
GTTTTGGCCCCCACAGGAAGGGGAAGCACAGGGGCGGCGGCGGCGGCGGC
GGGGACGGGGGAGAAGATGCAGAGACGGTAGTGAGGAGTTTCAAGAGACA
AAGGATGGGCGGTCGCGGGGGGGGGAGAGGGGGAGGCCGGGGAGGGAGAG
GGGGGCGGAGATAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9571:491..5104-

>mRNA_E_fasciculatus_S2_contig9571.17589.1 ID=mRNA_E_fasciculatus_S2_contig9571.17589.1|Name=mRNA_E_fasciculatus_S2_contig9571.17589.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1008bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9571:491..5104- (Ectocarpus fasciculatus EfasUO2)
CAGTCGGTAGCGCTGGCCCTGAAGCCGCACGTGGTGATTGCCACGCCAGG
GCGCCTGGTGGATCACCTGGAGAACACGAAGGGCTTCAGCTTGAGGACGG
CCAAGTACCTCGTGTTGGACGAGGCGGACAGGATGCTCGGCATGGACTTC
GAAGAGGAGATCAACAAGGTGCTCAGCGTGCTTCCGAGGGAGCGTAGAAC
GTTCCTCTTCAGCGCCACCATGACGTCGAAGGTTGCCAAGCTGCAGAGGG
CCTCTCTCGAGAACCCCGCCAGGGTGGAAGTCGCGAACAAGTTCTCGACT
CCGAAGACCCTGGTGCAGCAGTACCTCTTCATCCCGGCCAAGCACAAGGA
CTGCTACCTCGCCTACGTGCTGAACGAGTTCGCGGGGCAGAGCACGATCG
TGTTCGTGTCCACGTGCAACAATGCTCAGCGCGTGGCCCTGCTTCTGCGG
AATCTGGGTTTCCAAGCGGTTTGCCTGCACGGGCAGATGGGGCAGCCGAA
GAGACTGGGGGCGCTGGGAAAGTTCAAGTCGGGGCAGAGGAACGTCCTCA
TCGCGACGGACGTGGCCAGCCGCGGGCTCGACATACCCTCGGTCGACCTG
GTGGTTAACATGGAGATCCCCAGCCACGGCAAGGACTACATCCACCGAGT
GGGGAGAACCGCGAGGGCTGGAAGGGCCGGGCGCTCCATCGCCTTTGTCA
CACAGTATGACGTGGAGGTGTACCAGCGTATGGAGGCGTTGATCGGACAG
AAGCTCCCGCCGTACGCGTGCGACGAGGAGACGGTCCTGGTTCTCCAGGA
GCGCGTGGGAGAGGCGCAGAGGATGGCGGCGAGGGAGATGCGCGAGGCGG
ACTTCAACAAGAAGGGGAAGCACAGGGGCGGCGGCGGCGGCGGCGGGGAC
GGGGGAGAAGATGCAGAGACGGTAGTGAGGAGTTTCAAGAGACAAAGGAT
GGGCGGTCGCGGGGGGGGGAGAGGGGGAGGCCGGGGAGGGAGAGGGGGGC
GGAGATAA
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