mRNA_E_fasciculatus_S2_contig9563.17577.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Lactamase_B (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3X3_9PHAE) HSP 1 Score: 148 bits (374), Expect = 8.600e-40 Identity = 74/80 (92.50%), Postives = 78/80 (97.50%), Query Frame = 2
Query: 2 YADVEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
YADVEAEAIKHGHSTPMMAAAFAQRVGA+ LILNHFSARYRGDPSDASVAAM+RIERQAARAGG ER+QVVASWDLLE+P
Sbjct: 1012 YADVEAEAIKHGHSTPMMAAAFAQRVGAKTLILNHFSARYRGDPSDASVAAMLRIERQAARAGGLERHQVVASWDLLEMP 1091
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F6_9PHAE) HSP 1 Score: 132 bits (331), Expect = 5.130e-35 Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 2
Query: 2 YADVEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLE 235
YADVEAEAIKHGHSTPMMAAAFAQRVGA+ LILNHFSARYRGDPSDASVAAM+RIERQAARAGG ER+Q WD LE
Sbjct: 272 YADVEAEAIKHGHSTPMMAAAFAQRVGAKTLILNHFSARYRGDPSDASVAAMLRIERQAARAGGLERHQ---GWDFLE 346
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Beta-lactamase-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH3_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.620e-24 Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 2
Query: 2 YADVEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
YA +EA+ I HGHSTP MAA FAQRVGAR L+L HFS RY GD +S+A M RI RQA RAGGF+R+QV + DLL+LP
Sbjct: 404 YATIEAQTIAHGHSTPHMAARFAQRVGARALVLTHFSPRYHGDDRPSSIALMERIARQAVRAGGFKRHQVHTAHDLLQLP 483
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX78_TRICV) HSP 1 Score: 91.7 bits (226), Expect = 1.450e-20 Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 2
Query: 11 VEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
V +AI HGHSTP MA FA+RVGA+ L+LNHFS+RY+GD + S++ MMRIE+QA +A G +V A+WD++ LP
Sbjct: 212 VTKDAIMHGHSTPQMAGNFARRVGAKRLVLNHFSSRYKGDQTLDSMSIMMRIEKQAIKASGLPPERVAAAWDMMVLP 288
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Ribonuclease (Z n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCR1_FISSO) HSP 1 Score: 91.3 bits (225), Expect = 4.300e-20 Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 2
Query: 2 YADVEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
+ +V +AI HGHSTP +A AF++ V + LILNHFSARY+GD S S++ MMRIE QA +A G QV A+WDL+ LP
Sbjct: 269 FREVTRDAIAHGHSTPQIAGAFSKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLP 348
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I6E0_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.110e-19 Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 2
Query: 11 VEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
V +AI HGHSTP MA FA+RVGA+ L+LNHFS+RY+GD + S++ M RIERQA A G + VVA+WD++ LP
Sbjct: 575 VTKDAIVHGHSTPQMAGLFARRVGAKRLVLNHFSSRYKGDQTVESMSIMGRIERQAIEASGLSDDTVVAAWDMMVLP 651
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TGT9_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 1.340e-19 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 2
Query: 8 DVEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
++ + ++HGHSTP MA FA+R A+ML+LNHFS RY+GD S AS+ M +IE A +A G + + VVA+WD L+LP
Sbjct: 25 EIVEQTLEHGHSTPEMAGDFARRTRAKMLVLNHFSQRYKGDDSPASLEIMRQIEEIARKASGLKGHGVVAAWDQLQLP 102
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNX5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.380e-19 Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 2
Query: 11 VEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
V +A HGHSTP +A FA+R+ AR L++NHFSARY+GD S S++ M RIE QAA++ G R +V A+WD + LP
Sbjct: 92 VAKDAKAHGHSTPFIAGEFARRIKARKLVINHFSARYKGDQSLESMSIMSRIEGQAAKSSGLSREEVAAAWDFMILP 168
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Ribonuclease (Z n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3N8_FISSO) HSP 1 Score: 90.9 bits (224), Expect = 1.430e-19 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2
Query: 2 YADVEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
+ +V +AI HGHSTP +A AF + V + LILNHFSARY+GD S S++ MMRIE QA +A G QV A+WDL+ LP
Sbjct: 446 FREVTRDAITHGHSTPQIAGAFCKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLP 525
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Match: Hypothetical (protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E2L2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.370e-19 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 2
Query: 11 VEAEAIKHGHSTPMMAAAFAQRVGARMLILNHFSARYRGDPSDASVAAMMRIERQAARAGGFERNQVVASWDLLELP 241
+E + I+HGHSTP MAA FA+ +GA+ L+L HFSARY+GD S++ M IE+ A +A +QVVA+WD + LP
Sbjct: 31 LERDTIRHGHSTPEMAAQFARAIGAKKLVLTHFSARYKGDAQFDSISVMTIIEKIALKAADMRDDQVVAAWDFMSLP 107 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9563.17577.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9563.17577.1 >prot_E_fasciculatus_S2_contig9563.17577.1 ID=prot_E_fasciculatus_S2_contig9563.17577.1|Name=mRNA_E_fasciculatus_S2_contig9563.17577.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=81bp LRGRRGRSHQARPQHAHDGGRLRPAGGGQDAHPQPLLGALQGRPVRRERCback to top mRNA from alignment at E_fasciculatus_S2_contig9563:4628..5417- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9563.17577.1 ID=mRNA_E_fasciculatus_S2_contig9563.17577.1|Name=mRNA_E_fasciculatus_S2_contig9563.17577.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=790bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9563:4628..5417- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9563:4628..5417- >mRNA_E_fasciculatus_S2_contig9563.17577.1 ID=mRNA_E_fasciculatus_S2_contig9563.17577.1|Name=mRNA_E_fasciculatus_S2_contig9563.17577.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=243bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9563:4628..5417- (Ectocarpus fasciculatus EfasUO2)back to top |