mRNA_E_fasciculatus_S2_contig9531.17555.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Carn_acyltransf (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNU7_9PHAE) HSP 1 Score: 300 bits (768), Expect = 1.230e-96 Identity = 142/152 (93.42%), Postives = 146/152 (96.05%), Query Frame = 1
Query: 40 MAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPDAARPGCVRG 495
M +GNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVE+DA +KGYPHSYIEGLWDDMYLEGRWSLP+NSNPYLALKPPP SAVPPGSDPQI GAARFISSLLKWNRRV DGTFQPDAARPGCVRG
Sbjct: 1 MVNGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVERDATQKGYPHSYIEGLWDDMYLEGRWSLPINSNPYLALKPPPKDSAVPPGSDPQIVGAARFISSLLKWNRRVLDGTFQPDAARPGCVRG 152
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Carnitine/choline (acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJE5_9STRA) HSP 1 Score: 138 bits (348), Expect = 5.620e-35 Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = 1
Query: 13 SSKGVSYDDMAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKGYP------HSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPDA 471
S +++DM HGNPL LPR PIP L+ T+ R+L+S+ P RPE+ R + A F GDG +LH +V++DA +P H+Y++ W+D+YL GR+ +N NPY+AL+PPP + P SDPQ+ AA F+S+ +K+ + G F+PDA
Sbjct: 49 SGNPTTFEDMLHGNPLKLPRYPIPSLKMTMQRWLESVRPHLEGRPEEWQRVKQLAKEFEMGDGAILHRCLVQRDAYTAAHPPGVFGKHTYVDYHWEDLYLVGRYPCAINCNPYMALQPPPK-TYTPIHSDPQVATAAAFVSAHIKYVDMILSGKFEPDA 206
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Carnitine/choline (acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL0_9STRA) HSP 1 Score: 138 bits (347), Expect = 6.500e-35 Identity = 75/157 (47.77%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 16 SKGVSYDDMAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKG------YPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPD 468
S+ + Y+DM NPL LPRLP+P L T+ R+L S+ P A+ A F G+G LH +VE+DA+ YPHSYIE WDDMYLEGRW+LP+NSNP L L+PPP + P SDPQI AA FISS +K+ V G F+ D
Sbjct: 28 SQKLKYEDMLLSNPLKLPRLPVPALGATMQRWLDSVRPHAEGDAGKWEHAQKIAKEFEHGEGAELHRRLVEQDASDAAFQGGGHYPHSYIERCWDDMYLEGRWALPINSNPVLVLQPPPKGYS-PIDSDPQIATAAAFISSHIKYLSSVTSGAFEVD 183
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SKD4_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.180e-24 Identity = 57/155 (36.77%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 13 SSKGVSYDDMAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPDAAR 477
SS + + + GN ++P LP+P++EDT+ RYL+++ PLT D E+ +++ A F+ GP L + + A GYP+SYIE WD+MY GRW ++ NP+L+LK P P QI AA F S+ +W +V +G + D R
Sbjct: 33 SSFRYTVEGLYDGNLTNVPSLPLPQVEDTLKRYLETVRPLTTD--EEFEKSKKLAAEFVDTVGPTLQEKLRDL-TAHHGYPYSYIEEFWDEMYQGGRWPAMIHVNPFLSLKDSP-----DPAKQDQITRAAEFASAATRWWLKVVNGDLEADMER 179
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LWF6_9CRYP) HSP 1 Score: 101 bits (251), Expect = 4.310e-23 Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = 1
Query: 10 LSSKGVSYD--DMAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPDAARPGCV 489
LS+ +Y D+ N +LPRLPIP L+ T+ RY+Q+L + + E L + + F + DGP L ++ +D + GYP++YIE WDDMYLE R LP+N NP +L+ G Q ARFI S +W +++ DG +P++ P C+
Sbjct: 26 LSTGACTYKFADLYAINHQNLPRLPIPDLDQTLDRYIQNLRAVIPE-SEKLKHHEKNIETFRREDGPRLQKALIHEDQ-KPGYPYTYIEKHWDDMYLELRCPLPININPGYSLQDEV-------GQHSQASRVARFILSTFRWQKKLMDGLLEPESP-PQCM 177
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Carnitine (palmitoyltransferase II (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KVV7_ORNMO) HSP 1 Score: 103 bits (257), Expect = 1.270e-22 Identity = 60/134 (44.78%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 64 LPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQP 465
LPRLPIPKLE T+ RYL SLEP+ ++ R+R D FLKG+ P L ++V KD A K SYI W DMYL R LP+N NP+LALK P PG + Q+ A + S L++ R +R+ +P
Sbjct: 56 LPRLPIPKLEKTLERYLVSLEPILN--ADEYERSRKVTDGFLKGEAPELQKILVAKDKANKHT--SYISEPWFDMYLTSRAPLPLNFNPFLALKNDPR-----PGYNDQLIRATNLVVSSLRFLRSLRENVLEP 180
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I3C4_9CRYP) HSP 1 Score: 103 bits (256), Expect = 1.710e-22 Identity = 62/164 (37.80%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 10 LSSKG----VSYDDMAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPDAARPGCV 489
LSS G + + N L LP+LP+P+L T+ RYLQSL PL P +L R A +F +GP L S++ E+ +GYP+SY+E WDDMYL R +PV+ NP LK G+ Q ++FIS +W +V G +P+ + PGC+
Sbjct: 27 LSSTGDCKHYDFSQLYSHNHLQLPKLPVPELSSTLERYLQSLIPLME--PNELQSYRQMAKKFEAEEGPTLQSLL-EQSLGHEGYPYSYVERYWDDMYLNLRCPIPVHVNPAYNLK---QDQNCAKGNS-QASRLSKFISLSFRWQEKVLRGQLEPETS-PGCM 182
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Carnitine (palmitoyltransferase 2 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJK9_CAPO3) HSP 1 Score: 102 bits (254), Expect = 3.250e-22 Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 67 PRLPIPKLEDTVSRYLQSLEPLTRDRPED-LARARASADRFLKGDGPLLHSMVVEKDAARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPD 468
PRLP+P L+ T+ R++ S PL P+D LA + + F + GP LH+ V + A GYPHS++E WDDMYLEGRW LP+NSNP+ KP A G + A + L++ R++R +PD
Sbjct: 97 PRLPLPDLDTTLGRFVASASPLL---PKDELAITMQAVNEFRETAGPELHAKVAQIAANHSGYPHSFVESFWDDMYLEGRWPLPINSNPFFLFKPDLRLGARTNG----LARATSLTMATLRFIRKMRTAGLEPD 224
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Carn_acyltransf (domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I0Z8_9CHLO) HSP 1 Score: 100 bits (249), Expect = 1.540e-21 Identity = 64/168 (38.10%), Postives = 81/168 (48.21%), Query Frame = 1
Query: 1 LRPLSSKGVS-------YDDMAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDA---ARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPDAA 474
LR LSS +S Y M N L LPRLPIP L+DT SR+L+S + L A+ + F D L + DA A+ GYPHSYIE LWDDMY R PV +P+ + P P Q AA+F+ +W R+V DG F+ D A
Sbjct: 35 LRFLSSSSISHGNKRYDYSSMYETNYLSLPRLPIPSLQDTCSRWLKSTKALHESEASYAQTEAAAREFFSSPDAAALQEKLTAMDASATAKGGYPHSYIEKLWDDMYFGDRSFHPVYFSPFFKIIDTP-----DPKDMKQTERAAKFVHGFARWTRKVVDGEFEEDMA 197
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Match: Carnitine (acyltransferase 1 n=1 Tax=Phytophthora capsici TaxID=4784 RepID=A0A336U2K2_PHYCP) HSP 1 Score: 96.7 bits (239), Expect = 3.290e-20 Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 64 LPRLPIPKLEDTVSRYLQSLEPLTRDRPEDLARARASADRFLKGDGPLLHSMVVEKDAARKGYPHSYIEGLWDDMYLEGRWSLPVNSNPYLALKPPPMHSAVPPGSDPQIFGAARFISSLLKWNRRVRDGTFQPD 468
L RLPIPKLEDT+SRYL ++EP+ + RA AD F KG GP LH +V++DAA K SYI W +MYL R LP+N NP + LK P+ P + Q AA I+S ++ +R +RD +PD
Sbjct: 36 LTRLPIPKLEDTLSRYLAAVEPVVSS-DQFKQTQRAVAD-FQKGVGPQLHQALVDRDAANKHT--SYINQWWLEMYLNDRQPLPINYNPQIKLKMDPV-----PAKNSQSQRAASLIASTVRVHRTLRDKKLEPD 161 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9531.17555.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9531.17555.1 >prot_E_fasciculatus_S2_contig9531.17555.1 ID=prot_E_fasciculatus_S2_contig9531.17555.1|Name=mRNA_E_fasciculatus_S2_contig9531.17555.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=166bp LRPLSSKGVSYDDMAHGNPLDLPRLPIPKLEDTVSRYLQSLEPLTRDRPEback to top mRNA from alignment at E_fasciculatus_S2_contig9531:2083..4262+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9531.17555.1 ID=mRNA_E_fasciculatus_S2_contig9531.17555.1|Name=mRNA_E_fasciculatus_S2_contig9531.17555.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2180bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9531:2083..4262+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9531:2083..4262+ >mRNA_E_fasciculatus_S2_contig9531.17555.1 ID=mRNA_E_fasciculatus_S2_contig9531.17555.1|Name=mRNA_E_fasciculatus_S2_contig9531.17555.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=498bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9531:2083..4262+ (Ectocarpus fasciculatus EfasUO2)back to top |