mRNA_E_fasciculatus_S2_contig951.17542.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig951.17542.1
Unique NamemRNA_E_fasciculatus_S2_contig951.17542.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI)

HSP 1 Score: 539 bits (1388), Expect = 7.980e-192
Identity = 272/314 (86.62%), Postives = 291/314 (92.68%), Query Frame = 1
Query:   22 MRPFGVLLAASWVIIASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGPAVGLDHDRRSGYLFVAGGQIGTARVYDEDFALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDRDSGELAC 963
            MRPFGVLLAASW IIASEASSRLDVIDLPTGFFPEGITNGEGWTA+VGSL++GNIWKGDLETGQ EVFE+ APGPAVGLDHDRRS YLFVAGG +GTARVYDEDFALVADL LS+GNSSFVNDVIITKTAAFFTDS+QP IYKVNLDRETGALVDG AV TL+LSDNV VLEGA NVNGI ATDDGSAL++VNM+S+QLF+VDPDTGAATLIDLGGELLPG G  GLVLRKNTLWV++NALEQ+LEVSLAADLSCGS+APR LSNPLF+  TTAMRKGNSLYAVNAK GVA ED+ TT YEIVRVDRDSGEL C
Sbjct:    1 MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSDYLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSFQPKIYKVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALVIVNMESQQLFAVDPDTGAATLIDLGGELLPGRG-DGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 313          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 9.280e-152
Identity = 226/317 (71.29%), Postives = 261/317 (82.33%), Query Frame = 1
Query:   19 NMRPFGVLLAASWVIIASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGPAVGLDHDRRSGYLFVAGGQIGTARVYDEDFALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDRDSGELAC*E 969
            +MR  G LLA   ++  + ASSRLDVIDLPTGF PEGIT+G GWTA+VGSL+ GNIWKGDL+TG+ EV E+ APGPA GL HDRRSGYLFVAG   GT RVYDEDFALVADL   +  +S +NDV++TK AAF+TDS+QP+IYKVNLDRETGALVDGS+ ETL+L DN   +E A+N+NGI  TDDGSALIVVN +S+Q+++VDPDTG AT+IDLGG++L G    GLVLRKNTLWV +N LEQ+ EVSL+ADLSCGSVA R LSNPLF+  TTAMRKGNSLYAVNAKL VA EDI TT YEIVRVDRD GELAC E
Sbjct:   22 SMRVSGGLLAT--LVTVTSASSRLDVIDLPTGFSPEGITSGGGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTSIINDVVVTKGAAFYTDSFQPHIYKVNLDRETGALVDGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVL-GPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELACDE 335          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN98_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 4.590e-94
Identity = 175/315 (55.56%), Postives = 196/315 (62.22%), Query Frame = 1
Query:   22 MRPFGVLLAASWVIIASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGPAVGLDHDRRSGYLFVAGGQIGTARVYDEDFALVADLVLSEG-NSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDRDSGELAC 963
            MR FGV+LA+S +IIAS ASS+LDVIDLP GFFPEGITNGEGWTA+VGSL                                              TARVYDEDF +VADL L++G NSSFVNDVIITKTAAFFTDS+QP IYKV+LD ETG LVD SAVETL+LSDNV V+EGA NVNGI                                               VLRKNTLWV+  +  ++LEVSL+ADLSCGSVA R LS+P+F+  TTAMRKGNSLYAVNAK GVA ED+ T  YEIVRVDRDSGELAC
Sbjct:    1 MRSFGVVLASSVMIIAS-ASSKLDVIDLPRGFFPEGITNGEGWTAFVGSLKR--------------------------------------------TARVYDEDFTMVADLALADGGNSSFVNDVIITKTAAFFTDSFQPKIYKVDLDEETGELVDRSAVETLVLSDNVPVVEGAFNVNGIE----------------------------------------------VLRKNTLWVVHPSGGEILEVSLSADLSCGSVARRALSHPMFDTQTTAMRKGNSLYAVNAKFGVAEEDVDTAAYEIVRVDRDSGELAC 224          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L833_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.630e-84
Identity = 162/318 (50.94%), Postives = 194/318 (61.01%), Query Frame = 1
Query:   22 MRPFGVLLAASWVIIASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGPAVGLDHDRRSGYLFVAGGQIGTARVYDEDFALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEV--SLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDRDSGELAC*E 969
            MR  G LLA   ++  +  SSRLD                  + +       GN WK DL+TG+  V E+ APGPA GL HDRRSGYLFVAG   GT RVYDEDFALVADL   +  +S +NDV++TKTAAF+TDS  P+I KV                                      TD+ S LIVVN +S+Q+++VDPDTG AT++DLGG++L G    GLVLRK+TL V +N LE++ EV  SL+ADLSCGSVA R LSNPLF+  TTAM KGNS+YAVNA L VA E I TT YEIVRV RD GELAC E
Sbjct:    1 MRVSGGLLAT--LVTVASTSSRLDPF----------------YNSASVRAPEGNNWKDDLKTGEGGVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLAFGDVGTSMINDVVVTKTAAFYTDSIHPHINKV--------------------------------------TDNDSPLIVVNSESQQVYAVDPDTGDATVVDLGGDVL-GPRGDGLVLRKDTL-VSDNVLEKIYEVQVSLSADLSCGSVATRTLSNPLFDRQTTAMPKGNSMYAVNANLDVAEEVITTTAYEIVRVHRDGGELACEE 260          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 3.520e-80
Identity = 156/322 (48.45%), Postives = 206/322 (63.98%), Query Frame = 1
Query:   52 SWVIIASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGP-AVGLDHDRRSGYLFVAGGQIGTARVYD--EDFALVADLVLSEGNSSFVNDVIITKTA--AFFTDSYQPYIYKVNLDRETGALVDG--SAVETLLLSDNV------LVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENAL-----EQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDRDSGELAC 963
            S  I+ +  + RLD+IDLP GF PEG+T G G   YV +   G+IWKGDLETG   V      G  A+G+D DRRS YL+V G   G+  +YD  +DF+LVA++ L    +S VNDVII   +  A+ T+S Q   Y++ LD E G L +G  +  E + LS +       ++ + A+N NGIV TDD S+LI+VN QS +LF+VDPDTG ATLIDLGG+L+ G    GLVLRKNTLWV +N L     + V+EV L+ DLSCG++  R LSN  FN P TA+RKGNS++   +   V+ E+I TT Y++VRVDRDS    C
Sbjct:    9 SLAIVPAVLAGRLDLIDLPVGFQPEGVTLGHGQEVYVSAFTGGSIWKGDLETGVGSVVIEGGNGTTALGIDFDRRSDYLWVCGAFSGSLAIYDTTDDFSLVAEIQLGTVGASLVNDVIIHPRSEYAYITESSQLQFYRIALD-EYGRLPNGPNTVAEVIPLSSDFSFQPGEIIADQALNSNGIVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLILG--GDGLVLRKNTLWVCQNRLFGTPDQGVVEVLLSEDLSCGTITRR-LSNEFFNDPATALRKGNSMWTTISMWAVSGEEIATTQYQLVRVDRDSAVSEC 326          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5S5I5_9CHLR)

HSP 1 Score: 223 bits (569), Expect = 1.390e-67
Identity = 138/306 (45.10%), Postives = 188/306 (61.44%), Query Frame = 1
Query:   37 VLLAASWVIIASEASSRL--DVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPG-PAVGLDHDRRSGYLFVAGGQIGTARVYD-EDFALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDR 942
            +L+A S+ +I +  + +   +VI LP GF PEGI +G G T YVGS+ +G +++GD+ +G+ EV   A  G  A+GL +D RSG LFV+GG  G A VYD +  A VA++ LS    SF+NDV+ITK AA+FT+S+QP  Y+V+L R  G L      E + L  +   +  A N NGI AT +G ALI+VN     L+ VDP TG A  IDLGG  +P     GL+L+  TL+V++N L Q+  + L +D + GS+   + S  LF  PTT  R GNSLYAVNA+ G      P T YE+VRV R
Sbjct:   16 LLIALSFTLIGAAPAHQAFPEVIPLPNGFQPEGIASGRGNTFYVGSIPTGAVYRGDVRSGEGEVLVPAQEGRSAIGLKYDSRSGLLFVSGGNTGFAYVYDGKTGANVAEIQLST-TPSFINDVVITKDAAYFTNSFQPVFYRVSLARH-GGLPPAPTSEEVPLGGDFQFIPDAFNSNGIAATPNGKALIIVNSSEGALYKVDPATGDAKRIDLGGGSVPN--GDGLLLQGKTLYVVQNQLNQIAVIRLKSDFTSGSIVNTITSE-LFRVPTTIARFGNSLYAVNARFGTP--PTPDTEYEVVRVPR 314          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JWK0_9EURY)

HSP 1 Score: 223 bits (568), Expect = 2.090e-67
Identity = 140/293 (47.78%), Postives = 180/293 (61.43%), Query Frame = 1
Query:   67 ASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGPAVGLDHDRRSGYLFVAGGQIGTARVYDEDF-ALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDR 942
            A+  S+   VI LP GF PEGI  G G   +VGSL  G I++GDL TG  +VF     GPAVGL HD RS YLFVAGG  G A VYD D  ALVAD  L +  S FVNDV++T+TAA+FTDS +P +Y++ L    G + + SAVE + LS +   + G  N NGI A  +G  LIVVN  +  L+ VDP +G AT IDLGGE +      G++L   TL+V+ N L Q+  V+L  D + G V   V++NPLF+ PTT    GNSLYAVNA+ G    +     Y++VRV +
Sbjct:   35 AAAKSAFPAVIPLPIGFQPEGIVTGLGTDFFVGSLAGGAIYRGDLRTGSGDVFVPPTGGPAVGLSHDARSNYLFVAGGPTGRASVYDADTGALVADYELQD--SQFVNDVVVTRTAAYFTDSARPSLYRIPLGAG-GDVPNQSAVEEIPLSGDFTSVAGF-NANGIDAPPNGKYLIVVNTSTGLLYKVDPASGDATEIDLGGETVTA--GDGILLAGRTLYVVRNQLNQIAVVTLDPDATAGEVVD-VITNPLFDVPTTVTGFGNSLYAVNARFGTPPAN---AEYDVVRVSK 317          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZGA0_9CHLR)

HSP 1 Score: 220 bits (561), Expect = 1.590e-66
Identity = 138/303 (45.54%), Postives = 188/303 (62.05%), Query Frame = 1
Query:   37 VLLAASWVIIASEASSRL--DVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGPAVGLDHDRRSGYLFVAGGQIGTARVYDEDFALVADLVLS-EGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRV 936
            +LL    + +AS A+++   +VI LP GF PEGI  GEG TAY GSL  G+I+  DL TG  E+       PAVGLD DRR+GYLFV+GG  G  R+Y+       DLV S +    FVNDVI+T  AA+FTDS+ P +YKV+LD ++G      A  TL LS + + + G  N NGIVAT +G+ALI+V+    +L+ VDP TG ATLIDLGGE +      GLVL    L+V++N+L Q+ E  L+ + +  S+  +++++  F+ PTTA  +G  LYAVNA+ G      P   Y+IVRV
Sbjct:   12 ILLTLLTLAVASPAAAQRYPEVIPLPNGFQPEGIVVGEGNTAYAGSLADGDIYTVDLSTGAGEILLEGPGTPAVGLDFDRRTGYLFVSGGPNGDGRIYNTH---TGDLVTSYDFAGGFVNDVIVTPHAAYFTDSFMPVLYKVDLD-DSGT---PGADSTLSLSGDFVFVPGGFNTNGIVATPNGNALIIVHSSRGELYKVDPQTGEATLIDLGGENV--NSGDGLVLVARKLFVVQNSLNQIAEFHLSRNYTAASLR-QIITDDDFDIPTTADNQGARLYAVNARFGTTPG--PDVEYDIVRV 302          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase n=3 Tax=Haloferacaceae TaxID=1644056 RepID=A0A6A8G917_9EURY)

HSP 1 Score: 217 bits (552), Expect = 3.460e-65
Identity = 140/294 (47.62%), Postives = 179/294 (60.88%), Query Frame = 1
Query:   67 ASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPGP-AVGLDHDRRSGYLFVAGGQIGTARVYDEDF-ALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTYEIVRVDR 942
            AS A++   VI LPTGF PEGI  G G   +VGSL +G I++GDL TG  EVF     G  AVGL HD RS YLFVAGG  G A VYD +  ALVAD  L +G  +FVNDV++T+TAA+FTDS++P +Y+V L    G + D SAVE + LS +   + G  N NGI A  +G  LIVVN  +  L+ VDP TG AT IDLGG  L      G++L   TL+V+ N L  +  V L  + + G V   + ++P F+ PTT    GNSLYAVNA+ G    D     Y++VRV +
Sbjct:   18 ASAAAAYPSVIPLPTGFRPEGIVTGLGNEFFVGSLAAGAIYRGDLRTGSGEVFVPPVEGGVAVGLSHDARSNYLFVAGGPTGQASVYDANTGALVADYGL-QGPPTFVNDVVVTRTAAYFTDSFRPALYRVPLGAG-GDVPDQSAVEEIPLSGDFTSV-GGFNANGIDAPPNGEYLIVVNSSTGLLYKVDPATGDATEIDLGGASLTA--GDGILLEGRTLYVVRNQLNLIAVVQLDPEATAGEVVDEI-TDPQFDVPTTVAGFGNSLYAVNARFGTP--DPANAEYDVVRVSK 303          
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Match: Superoxide (dismutase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UU31_9CHLR)

HSP 1 Score: 214 bits (544), Expect = 5.820e-64
Identity = 129/288 (44.79%), Postives = 181/288 (62.85%), Query Frame = 1
Query:   37 VLLAASWVIIASEASSRL--DVIDLPTGFFPEGITNGEGWTAYVGSLISGNIWKGDLETGQSEVFEVAAPG-PAVGLDHDRRSGYLFVAGGQIGTARVYD-EDFALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRETGALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLFSVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLAADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLG 888
            +L+A S  +I +  S +   +VI LP GF PEGI +G+G T YVGS+ +G +++GDL +G+ EV   A  G  A+GL +D RSG LFV+GG  G A  YD +  A VA++ LS    SF+NDV+ITK AA+FT+S+QP +++V L ++ G L      E + L  +     GA N NGI AT +G  LI+VN     L+ VDP TG AT IDLGG  +P     GL+L+  TL+V++N L ++  + L +D S G++    +++PLF  PTT  R GNSLYAVNA+ G
Sbjct:   16 LLVALSLTMIGAAPSHQTFPEVIPLPNGFQPEGIASGKGTTFYVGSIPTGAVFRGDLRSGEGEVLVPAQAGRSAIGLKYDERSGLLFVSGGNTGYAYFYDGKTGANVAEIQLST-LPSFINDVVITKEAAYFTNSFQPVLHRVPLAKK-GGLPPAPTSEEIPLGGDYQFTPGAFNANGIAATPNGKTLIIVNSTEGALYKVDPGTGNATRIDLGGGSVPN--GDGLLLQGKTLYVVQNQLNRIAVIRLKSDFSAGTIV-NTITSPLFRVPTTIARFGNSLYAVNARFG 298          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig951.17542.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Superoxide7.980e-19286.62dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Superoxide9.280e-15271.29dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Uncharacterized4.590e-9455.56protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.630e-8450.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Superoxide3.520e-8048.45dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Superoxide1.390e-6745.10dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026... [more]
Superoxide2.090e-6747.78dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A64... [more]
Superoxide1.590e-6645.54dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=... [more]
Superoxide3.460e-6547.62dismutase n=3 Tax=Haloferacaceae TaxID=1644056 Rep... [more]
Superoxide5.820e-6444.79dismutase (Fragment) n=1 Tax=Chloroflexi bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig951contigE_fasciculatus_S2_contig951:3874..10323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score538.9
Seed ortholog evalue1.6e-150
Seed eggNOG ortholog2880.D8LPY1
Model size1005
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG OGs2D5U8@1,2SZPX@2759
Cds size945
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig951.17542.1prot_E_fasciculatus_S2_contig951.17542.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig951 3913..10302 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842599.6120763-UTR-E_fasciculatus_S2_contig951:3873..39121696842599.6120763-UTR-E_fasciculatus_S2_contig951:3873..3912Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig951 3874..3912 -
1696842599.7299259-UTR-E_fasciculatus_S2_contig951:10302..103231696842599.7299259-UTR-E_fasciculatus_S2_contig951:10302..10323Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig951 10303..10323 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842599.6249154-CDS-E_fasciculatus_S2_contig951:3912..41191696842599.6249154-CDS-E_fasciculatus_S2_contig951:3912..4119Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig951 3913..4119 -
1696842599.644014-CDS-E_fasciculatus_S2_contig951:4875..49321696842599.644014-CDS-E_fasciculatus_S2_contig951:4875..4932Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig951 4876..4932 -
1696842599.6555736-CDS-E_fasciculatus_S2_contig951:5084..52221696842599.6555736-CDS-E_fasciculatus_S2_contig951:5084..5222Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig951 5085..5222 -
1696842599.6656203-CDS-E_fasciculatus_S2_contig951:7070..71841696842599.6656203-CDS-E_fasciculatus_S2_contig951:7070..7184Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig951 7071..7184 -
1696842599.6755464-CDS-E_fasciculatus_S2_contig951:8407..85501696842599.6755464-CDS-E_fasciculatus_S2_contig951:8407..8550Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig951 8408..8550 -
1696842599.7011364-CDS-E_fasciculatus_S2_contig951:9423..95551696842599.7011364-CDS-E_fasciculatus_S2_contig951:9423..9555Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig951 9424..9555 -
1696842599.7165275-CDS-E_fasciculatus_S2_contig951:10148..103021696842599.7165275-CDS-E_fasciculatus_S2_contig951:10148..10302Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig951 10149..10302 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig951.17542.1

>prot_E_fasciculatus_S2_contig951.17542.1 ID=prot_E_fasciculatus_S2_contig951.17542.1|Name=mRNA_E_fasciculatus_S2_contig951.17542.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=315bp
MRPFGVLLAASWVIIASEASSRLDVIDLPTGFFPEGITNGEGWTAYVGSL
ISGNIWKGDLETGQSEVFEVAAPGPAVGLDHDRRSGYLFVAGGQIGTARV
YDEDFALVADLVLSEGNSSFVNDVIITKTAAFFTDSYQPYIYKVNLDRET
GALVDGSAVETLLLSDNVLVLEGAVNVNGIVATDDGSALIVVNMQSRQLF
SVDPDTGAATLIDLGGELLPGEGAGGLVLRKNTLWVIENALEQVLEVSLA
ADLSCGSVAPRVLSNPLFNYPTTAMRKGNSLYAVNAKLGVAIEDIPTTTY
EIVRVDRDSGELAC*
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mRNA from alignment at E_fasciculatus_S2_contig951:3874..10323-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig951.17542.1 ID=mRNA_E_fasciculatus_S2_contig951.17542.1|Name=mRNA_E_fasciculatus_S2_contig951.17542.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6450bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig951:3874..10323- (Ectocarpus fasciculatus EfasUO2)
GCAACGCACAGTTTTGTGAACATGCGACCGTTTGGAGTGCTACTCGCGGC GTCATGGGTGATCATCGCAAGTGAAGCTTCGTCGAGGCTGGACGTGATCG ACTTGCCGACAGGATTCTTTCCGGAAGGCATCACCAACGGCGAAGGATGG ACTGCCTACGTGGGCTCATTGATTAGTGAGAACACATTTCATTCTCCATT GACGTTGCCTGTTGTTTTCCTGCTGCTTTGACGATTTGATTTCATTTTCC ATTCGGTCATTTTTGGTGAGTATCGACTGTAGTAGTAATCAGTTCGTCTA CCCCGGGAAAAATGTCGCCACGTGAGTGACTGGACGTAAGTATCCGATTC GTTCGCCGAACAACTCCCAAGGGTACCAGATCGCGCATACTTCTCCTCCA TCGACCCCCCCTCCTCCTTCGCCCTGGTTCGGTGAGAATCCGGCGTGCTC CGTCCAGGCCCTCGCACGCCATGCCATCGTTTGGAGGCGTGGTGTCCCCC GTAGCGTGCCCTTGGCTTGTACTGGCGAGGAGTACCGAACTCTCTATTTG TGCAGTCGAGCACACCAACGTGGTAATTTCGTACATCGGCGAACTAGAGT AGGCCATCGATCAAGTTGGCGTCGGCTTGACCTCTTTCTCTTTCGACCAA CTTGGTTTGAGACGGGCCGGTTTGTCCCAGAAGTCCTCTCTCTTCCATAG TCTCCGCCTTCCTTCATGTTGAAGGCCAACGCATTGCCCTTTGTTTGCCT ATCCCGTGAATGATCCAGGTGGGAACATCTGGAAGGGCGATCTCGAAACC GGCCAGAGCGAAGTATTTGAGGTTGCCGCTCCGGGCCCCGCCGTAGGCCT GGACCACGACCGCCGATCTGGCTATCTCTTCGTCGCTGGGGGACAAATAG GTGCATTTGTTTTTTTGTCAGATCTGCTTTGTCCGATGTTTTTTATTCCA ATGGCTGCTGATCGATTGACGATGATCTGTGTGTTACCTTTTCGTGGACT CGTGAGTCCATCCAATGTGATACGCTTGAAATGAATATATGCACCGTAAT ATGAAGGTGGAGAGAAAAATGAAACTCTACATGTGTGACTTTCGTTCTTG GGAGTCGGGTTGATGCGCCCAGAAAGCGTTCCATAAAGGCCTGTAGGAAC TGAGATTCAGACCAAACTTGATGACATGCGCTTGCAACAAATGTATCGAT ACGGCACCGTCAACTATTGATACCGAAGTTTCGGTGGGATTCATGCACAC GCTCCGTTTTTCTTGGTTGGCATGGTACCAACCCTCCCTTCATGGTCTGC CGTGTGCGTGCTTCGCTTGGCATATTCTCGTGAGGCCGAGTCATTCACTG CTATGCCGGCCTCTTCTGGCGTAATACTGCTACAGTAGCTGCAGCAGAGC TCTGGTTCGGTCGCGGTATCTTGGCAGCCAAACATATTAAGCATACAGCC ATCGGACAGTGCCGTAAGGTTGTGAGTCATCCCACGATCCGGAGCCATCG CAAAGGGGTGCGATGCCAACAAAATACCGAAAATGTTTGAAAAACGACCG CACGGGGGTGTGGTGAGTCACAACCTTACCGTAGTCAAGATTCACTGCTA GCTTGGTTCGAATGGCAATCGTGAGAGTTCCACGAAACTTTACTGAAGAA CTCAGAATAGGCACCAGTGCGGGCGAGCTCTACACAGCGAGCAAACCATG AATTGCATTCACACAATATCATCTTTGTGTCTTTTCCGCGTCTCGTCTGA CCAACGCATTTGTATCCTATCAGGAACCGCACGCGTGTACGACGAGGATT TCGCTTTGGTTGCAGATCTGGTCCTAAGCGAGGGTAACTCGTCATTTGTG AATGACGTCATCATCACCAAGACCGCCGCATTCTTCACGGATTCATACCA ACCGTACATATACAAGGCGAGGCAGCTGCGCCATCCAGTGAATAAATTTC GTCCAAGACAATGTGGGGAATAATCAAACCGACATCAGCATGTTCCGTCG GCAACGCCCGGTGCTCCGAAATTGAGTAATATTTCCATCGTTTCCACTGA AGAGAAGGACTTATCCACAGTGACACCGGGGCAGCAAACGAATTCAACGT CGGCAAGAAAAATGAATGGAGGCTTCTGCCCTGATACATTAACGTGTTTA AAATACAGTCGCACACCTACAGCCGAGCATTGTCCTTCTCCCTACCGTGA GCACTAGAGAACACCGCGTAGAATGGAAATAACTTGCGGTCAGCCCGGTA ATAAATCTGTAAACGTTCCACAGGCGCGTCAAGCCTGTAAGAGCGGTGGC AGCAGGGTGGGTGGGCGGTCTTAAAAATGGTTCTATCGTACCCGTTGTTC TCTCGTATTCACAGTTGGGAGAAAGATAATGAATGATGGGCTGTACGCAA ATGTTAACATTGTATCAGGGCAGACTCCCCCCATCCATCATTTCGCGTCG AAGAAGTGGATTCATTTGTTCGTAGCCCCGATTATATTGTTGGAAATTTC CTGGTGGTGCTGCTGATAGTATTGTTGTTGTCGTTGTTGTTTATGGATAG CGGTGGCGGGTAGTGCATGCAACTACCACCATTTTCCTTCGTATGTGTTA GTAGAGGTAACCTAGGGTGTGCTTCCACTTTCCCATCAGATTTCAACAAA GCAATACCGGGATGTCTGGGTCACCTGCTTGGATTTAGTGAGTTGCTCGC CTAAGGCGATTGTTCGCGTCAAGACAAGCCCCATAAATTTCTAGGCGTTG GCGCTGGCCCAGCCCGCTCCCAGACGGTCATGTTGCCCACCCCCCAGTAT GATTCAACCCTCGTGGTTGTGGTATTCTTTGAAAATTTCACCTGGTGTAT TGTTCTTTGGCCCGTTGGTGATCAGGAGCACTGGGCGCCATTCCCTCTTA GCTATACCTGTCTGTGAGGTATGTTTTCTCGTTTCTCGTATTTCGTGGGA ATTGTGGGCCATTCATATTTTTGTTAAGGTTGTCTGTTTTTCCTTTTCTT GGGGTCAGTCCGGCGGTGACGGCGTAACTATTCCCCATTGTGATTTGACC AGCATATGCGACAACAATGACATCGGGTACAGCGTTAAAACTATACCCTA TTGTTTTCACAACCGAATTAAATTTGGGATGGTCCACAGGTGAACCTCGA CAGGGAGACCGGTGCGTTGGTGGATGGATCGGCCGTCGAGACGCTCCTCC TCAGCGATAACGTTCTCGTGTTGGAAGGCGCAGTCAATGTCAACGGCATC GTGGTGAGCGACTGCCGGAAAGGGCAAAATATCCCAAACTTAAACTTGTG AGAACCGCACCTCAGTAGCGGGTGCGAAAGCCAAAAGGCCCTGTCTTCTT ATGGTTGCCATGGCTGACTCGCGGTAATACGATCTGCAAATGCAAAGGTT TGATCCCTCACGCCTTGACATCGCCTTCTCCCACCGAACAAAGCGCACGT GCGCATGCGCAGCAGTTAGTTAGGACGTTTGTTGCATTTCCTTCGCCGTA TGCCAAGGTTCAGGTATGTGTGCAGCGGCGAGAGCGAGAAAATCACGCAT GCATGCATGCACATGCATCTGATTGATGCACCCCCTCGTGTCGTCTCGGC GTCGCCCTCAACGACAAGCACTGCTGCGTTATAACCAATGGTTCCTCGGC AATTTTACCGCCGTCAAATCGCCGCCGTTGTGGGCGGTCTCGGTAATCCG CCGTTTGACCGCCGTTTTTTGGTTTTACCGCCTGCGCCAAACTCGTTACC GCCAAAAAACGCGTTACCCCCATCCGCCAAACCAACGGCGTTACCACCGA AAAATTACCGCCAATGTTTGGTTTTACCGCCTCCGCCAAAGTAGTCACCG CCGAAAATCGCATTACCACCAACAACCACCCAAATATTTACCGCCGTACG TCCATACCGCCGAAACATTACCGGCGTAGACTATGGGTTCGTCACCGCCG AACGAGCGTCCGAGCGAGTAGAGGTTTAGCCTCGACTGTCGTGCCAGCAC AATGAATGAGATTCAGGAGTTCGGCTGCGCGTGTGGATTTGCTTGCGTTG TTCTCTCCGGCCATTTCTTTCTTGATTATTTCTCGTTGATTTTTATCTGT TCTTCCTTGGATCTGGATTTTCTGGTTCGGGTTCGTTTTCTGGAGAACCC ATCGACTAAATAAACTCAGTGCACACGGAAACGAGGAGGCGCTTGAAGTT GTGGCCATATAGTCTATGGCATTGGCACTCATTACTGCCGTGAAATTGCC GACGTGGTGGGCGGTCCCGGTAATCCGCCGTTTTTTCTTTTTACCGCTTC CGCCAAATTCATTACCGCCCAAAAGGGCGTTACTGCCTTCCGCCAAAATA ATTACCGCCGTATGGCGTTACCGCCGAAAAATTACCACCGTTTTCTTGTT TTACCGCCTCCGCCAAAGTCGCTACCGCCGCAGAACGCGTTTCCGCCTTC CGCCAAAACAATTACCGCCGTGTGGCGTTACCGCCGAAGAATTACCGCCA ACGTTCGGTTTGAACGCCTCTGGCACGTCTCTACCGCCGAAAATCGCATT ACCGCCTACTGCCAAAACAAATACCGCCACATGGCATTACCGCTGAATAC CTGTCCGCCTAATACACCGTTCCCGACTAAACCCTTGGTTATACCCGTGC TATCGTGCCAATGGCATTTTTAGAAATGGGTACGGAGATCTGAGCCTACA GGGTTAGGGTTATTCGTCACGAAAGCTCTGATCGATACGAGTTTTTCAGT CAAATATTTCGTTGGGCTACTCAGTCAATGCTCACTGATTACAATTGTAC ACTCAAAATGGATTATCACTAGAGCATTTATCGATGAAAGATTCGAACGC GGTGGTTTCGATTCCAGGCGTGGCCGTAAAGAACTATGGCTACTCTGTTG CGCCTGAAGACGCGTAGGGCAAGCTTGAGTAGGGATGTATTTAATTTCTA AGATCGCCGCGCGCATTATCATCAAGTCGGGAGTAGCATGGTGATAGGGT GAATCGATCTCAACCATCGCAGTCGCAGGGTACGCGGTGAAGTTTTCCGT TCCACAAAGCTTCTAGCCGTTCCCCTTCTTTTGTGCAACTGCTGTTCTCA GGCCACAGACGACGGCAGCGCGCTGATCGTTGTCAACATGCAATCGCGGC AGCTGTTCTCCGTTGACCCCGACACCGGTGCTGCAACTTTGATCGACCTC GGAGGCGAGCTCCTTCCTGGGGAGGGCGCCGGTGGGCTGGTGAGGAGAAA AATGTTGCTTTTGATGCGGCCAGGCAAGGAAGTAACCATGCTGAACGTCC AAGCAGGCACACCGCGTGCTATCGCCGTGAGCTCCAATGAATTATCAGTT CTTCCCGATGCACTCGCTGCGCGTGATTGATTCTCATGTAGGTGCTGCGC AAAAATACGCTCTGGGTCATCGAAAACGCACTCGAACAAGTTTTGGAGGT GAGTTGTCTAACGCCGGGTCTGAATAAGCCGAGACTTTTCTGTAGAAGCA GCGGCTTTTCAGAAACATTGCCATATACATCGTGTTGAAGATGTAGTGCA GTTTCCATACGACAAAAGGGCGATTTCGGGCCGAAAATGACACACCGCGT GGAGGCCTCTCATTCCACTCTGTCAACCTTCTTTTCGCAAGTGGCACACA TTCCACCGACTCCCTCCCTTCACAAAGTTGAAAATAGTCAAGTACTTCCA CGGCGTTCCCAGTCACCATACTTTTGTTGTGGTTGGAAAGCGGCGGGTTG GGATATATCTCGGTTTCGCGTTATTTCGCTCGAACTTTATCCTTTCGTTT ACTCGTGTTGCCAGCGAATACAAAGTACTGGGTTTGTTCCGGGAGCCCGT GACTGGGACAGTGAAGCCAGCTATTATTGTAGACTCGCAGATAATGTGCA AGCGCTACTATACAATTGTGTGGACCATGAAGTCACGTGCGCCCCCGCCC TCCACAACTGACGGTCAAGGTACATCACCCAGGAATGCCCACGACGAATC GAGTTGCCTTTCGTTGGCCGAGGTGTGTTGTATTCCCACAACGATGATGG GAGCTCTTGTTGACTTCATAATTTCTGCAAAGAAAGCGGTCTTACAACCT CGACGATCCGATAGGGCAACACTACGCTCAAATTGCAAGCACGCCCTACC AACATGTCCTCTCGCTGCCTCGTTTTGGGTTTCCCGGCGTGTGTGTCTAA GCAGGTGTCTCTTGCGGCGGACCTGTCTTGCGGGTCAGTGGCCCCTCGCG TGCTATCAAACCCACTCTTCAACTACCCTACCACTGCCATGCGCAAGGGA AACTCTCTGTACGCCGTGAATGCCAAGTTGGGCGTGGCCATAGAGGACAT CCCCACCACGACGTACGAGATTGTTCGTGTCGACCGAGACAGCGGGGAGC TGGCGTGCTAAGAGCCTCTAATAGAGCTTTTTGGTCGAAAATAAAGAGGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig951:3874..10323-

>mRNA_E_fasciculatus_S2_contig951.17542.1 ID=mRNA_E_fasciculatus_S2_contig951.17542.1|Name=mRNA_E_fasciculatus_S2_contig951.17542.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=945bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig951:3874..10323- (Ectocarpus fasciculatus EfasUO2)
ATGCGACCGTTTGGAGTGCTACTCGCGGCGTCATGGGTGATCATCGCAAG
TGAAGCTTCGTCGAGGCTGGACGTGATCGACTTGCCGACAGGATTCTTTC
CGGAAGGCATCACCAACGGCGAAGGATGGACTGCCTACGTGGGCTCATTG
ATTAGTGGGAACATCTGGAAGGGCGATCTCGAAACCGGCCAGAGCGAAGT
ATTTGAGGTTGCCGCTCCGGGCCCCGCCGTAGGCCTGGACCACGACCGCC
GATCTGGCTATCTCTTCGTCGCTGGGGGACAAATAGGAACCGCACGCGTG
TACGACGAGGATTTCGCTTTGGTTGCAGATCTGGTCCTAAGCGAGGGTAA
CTCGTCATTTGTGAATGACGTCATCATCACCAAGACCGCCGCATTCTTCA
CGGATTCATACCAACCGTACATATACAAGGTGAACCTCGACAGGGAGACC
GGTGCGTTGGTGGATGGATCGGCCGTCGAGACGCTCCTCCTCAGCGATAA
CGTTCTCGTGTTGGAAGGCGCAGTCAATGTCAACGGCATCGTGGCCACAG
ACGACGGCAGCGCGCTGATCGTTGTCAACATGCAATCGCGGCAGCTGTTC
TCCGTTGACCCCGACACCGGTGCTGCAACTTTGATCGACCTCGGAGGCGA
GCTCCTTCCTGGGGAGGGCGCCGGTGGGCTGGTGCTGCGCAAAAATACGC
TCTGGGTCATCGAAAACGCACTCGAACAAGTTTTGGAGGTGTCTCTTGCG
GCGGACCTGTCTTGCGGGTCAGTGGCCCCTCGCGTGCTATCAAACCCACT
CTTCAACTACCCTACCACTGCCATGCGCAAGGGAAACTCTCTGTACGCCG
TGAATGCCAAGTTGGGCGTGGCCATAGAGGACATCCCCACCACGACGTAC
GAGATTGTTCGTGTCGACCGAGACAGCGGGGAGCTGGCGTGCTAA
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