mRNA_E_fasciculatus_S2_contig949.17522.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig949.17522.1
Unique NamemRNA_E_fasciculatus_S2_contig949.17522.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Possible (Cdc2-related protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK48_ECTSI)

HSP 1 Score: 948 bits (2451), Expect = 0.000e+0
Identity = 503/545 (92.29%), Postives = 515/545 (94.50%), Query Frame = 1 
Query:    1 LWTTDLLMMRKAQDRAGLHGGLXXXXXXXXXXGFGATLASNKFVRAAIREDTLKAAGLRCLLPALDAWKGSTVKGPLPRVDEGRIMEIYLQRWPADKKEMDMASGFSSSGVAELALFQEMHSYSTSTTGHSTLLVPFAVVKGTGLKPPAKIGAPGSSKASSDRNNAGKLDKGAGAAAEGVPLAADERTTAVIGMHDPLGIAGVPMTLGLQQGADAXXXXXXXXXXXXXXEKASLSKIPEELLKPSYLLLEPVRYTLAEILRLCRRPMVLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSVSGCLKLGCLTQAMMVAPKDAATTPIEGMNGMDEDVEGEIDMEVEETPAGRKAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPLGPDGKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPRQGQHDERVRA 1635
            +WTTDLLMMRKAQDRAGLHGGLXXXXXXXXXXGFGATLASNKFVRAAIREDTLKAAGL CLLPALDAWKGSTVKGPLP VDEGR MEIYLQRWPADKKEMDMASGFSSSGVAELALFQEMHSYST+T+GHSTLLVPFAVVKGTGLKPPAKIGAPGSSK+SSDRN AGKL KGAGAAAEGVPLAADE TTAVIGM DPLGIAGVPM+LGLQQGADA              EKAS SKIP+ELLKPSYLLLEPVRYTLAEILRLCRRPMVLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSVSGCLKLGCL QAMMVAPKDAAT P +GMNG+DEDVEGE+DMEVEETPAGRKAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVD KHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRP+  +GKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPR GQHDER+ A
Sbjct: 1138 VWTTDLLMMRKAQDRAGLHGGLXXXXXXXXXXGFGATLASNKFVRAAIREDTLKAAGLSCLLPALDAWKGSTVKGPLPGVDEGRTMEIYLQRWPADKKEMDMASGFSSSGVAELALFQEMHSYSTNTSGHSTLLVPFAVVKGTGLKPPAKIGAPGSSKSSSDRNAAGKLAKGAGAAAEGVPLAADEITTAVIGM-DPLGIAGVPMSLGLQQGADADPAASGGGEGDG--EKASPSKIPDELLKPSYLLLEPVRYTLAEILRLCRRPMVLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSVSGCLKLGCLAQAMMVAPKDAATAPNDGMNGIDEDVEGEVDMEVEETPAGRKAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVDQKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPVDKEGKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPRHGQHDERLDA 1679
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT1_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 5.490e-23
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 1 
Query: 1465 KVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPRQGQHDERVRA 1635
            KVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPR GQHDER+ A
Sbjct:   10 KVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPRHGQHDERLDA 66
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RW98_THAOC)

HSP 1 Score: 102 bits (254), Expect = 5.620e-19
Identity = 84/305 (27.54%), Postives = 133/305 (43.61%), Query Frame = 1 
Query:  733 SYLLLEPVRYTLAEILRLCRRPM----VLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSVSGCLKLGCLTQAMMVAPKDAAT--TPIEGMNGMDEDVEGEIDMEVEETPAGRKAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLY-RHLRPLGPDGKSLHFKPRLDKVL----------AAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYF 1596
            S+L+LEP    L +++   +R      +LP  ++ S   D+L A++ CH  ++V++S+  +++YL  SG  KL  L++ M++  KD      P++ +                                            KK     + D EP        APE+++     H   TD+WA G L A L LGK +F G+ R  ++  VFK  G P +G +    + P Y R++  +G  GK   +   ++K L          A E   G      L +LL GLL LD + R+SA +AL  PYF
Sbjct: 1033 SHLVLEPTPINLQKVMSRYQRKSGGGKILPPNVLASWCHDILSAISFCHSNHIVLRSMLPDQIYLDHSGTAKLSGLSKIMVLHGKDRTKDFNPLKFVRS------------------------------------------KKGKGKSSDDVEPFA------APELLLGGTR-HTKETDMWAFGALTANLLLGKQLFPGKDRVSKMTQVFKIVGVPDKGNYEHAKRFPYYSRNMHVIGDGGKKKKYVRGVEKALRHMVKSFESDAQEDFAG------LTNLLDGLLHLDPKKRMSADEALRHPYF 1282
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3J4Z1_9ROSI)

HSP 1 Score: 98.6 bits (244), Expect = 3.630e-18
Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = 1 
Query: 1189 LWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPLGPDGKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYF 1596
            LW  +PE+++  +  +GPA D+W+VGC+ A+L LGKP+F G+   +QL  +F+ CG+P +  WP  +K PLY   +P  P       K RL +V           D    +LL+ +L LD   R+SA+DAL + YF
Sbjct:  197 LWYRSPELLLGAEK-YGPAIDMWSVGCIFAELLLGKPLFPGKDIPEQLNKIFELCGAPDEVNWPGVSKIPLYNDFKPRKPK------KRRLQEVFRH-------FDHHALELLERMLTLDPSQRISAKDALDAEYF 318
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PVY0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.360e-17
Identity = 81/309 (26.21%), Postives = 135/309 (43.69%), Query Frame = 1 
Query:  733 SYLLLEPVRYTLAEILRLCRRPM-----VLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSVSGCLKLGCLTQAMMVAPKDAAT--TPIEGMNGMDEDVEGEIDMEVEETPAGRKAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYR-HLRPLGPDGKSLHFKPRLDKVLA--AEGNKGVPLDPA-LADLLQGLLKLDSRHRLSARDALASPYFAPRQGQHDER 1626
            S+L++EP    L +++   +R       ++P  ++ S   D++ A++ CH  +++++SL  +++YL   G  K   L++ M++   D      P++ +                                            KK+    T+D EP        APE+++     H   TD+WA+G L A L LGK +F G+ R  ++  VFK  G P +G +    K P Y  H+  LG +GK   +   ++K L    + +K    D A L  LL GLL LD + RL+A  AL  P+      Q D +
Sbjct: 1412 SHLVMEPTPLNLQKVMGRYQRKKEGNFAMIPPSVLASWCHDIISAISFCHSNHIILRSLLPDQIYLDNCGTAKFSGLSKVMVLHGNDRTKDFNPLKYVRS------------------------------------------KKSKDHNTEDVEPFA------APELLLGGTR-HTKETDMWALGALVANLLLGKQLFPGKDRISKMTQVFKIAGVPEKGNFEAAKKFPYYSLHMYVLGDEGKKKKYNRGVEKALRHMLKLSKDAEEDFAGLISLLDGLLHLDPKKRLTAEQALDHPFIRNHSAQIDRK 1671
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M4R3_CHABU)

HSP 1 Score: 94.7 bits (234), Expect = 5.810e-17
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 1 
Query: 1189 LWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPLGPDGKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYF 1596
            LW   PE+++     +GPA D+W+VGC+ A+L  G+PI  G+   +QL+ +F+ CG+P +  W +  K PLY  ++   P  + LH   +                P+   L++ LL LD + RLSA+DAL S YF
Sbjct:  195 LWYRPPELLLGATK-YGPAVDMWSVGCIFAELLSGRPILPGKNELEQLQLIFQLCGTPDESNWEDVTKLPLYSLIKNEKPHPRQLHINFK-------------NFHPSALKLVEKLLTLDPKKRLSAKDALDSDYF 316
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Protein (kinase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VQF2_NAEGR)

HSP 1 Score: 93.6 bits (231), Expect = 6.840e-17
Identity = 69/268 (25.75%), Postives = 105/268 (39.18%), Query Frame = 1 
Query:  802 VLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSVSGCLKLGCLTQAMMVAPKDAATTPIEGMNGMDEDVEGEIDMEVEETPAGRKAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVDH--KHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPLGPDGKSLHFKPR-LDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYF 1596
            VL    V+S++Q LL A+A  HD   +   L    V++  +G +KLG    +  V P++         N +                                                          LW   PE++VD      +GP  D+W++GC+ A+L L  P+F G T  +QL  + +  G+  Q  WP+ +K   YR            HF  + +   L  +        P + DLL+ LLKLD R R+SAR+AL  P+F
Sbjct:  120 VLDEAFVKSVMQQLLSALACIHDSGSLHCDLKTSNVFIHANGQVKLGDFNLSRKVHPEEFGVVQHFSRNII---------------------------------------------------------TLWYRPPELLVDQFGSSRYGPEVDMWSMGCIFAELLLRSPLFPGNTEVEQLFKIIQLLGTANQRNWPDASKHQTYRD-----------HFSNKVIPNTLRLKFKDFADYSPQIVDLLEKLLKLDPRERISAREALKHPWF 319
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Serine/threonine-protein (kinase, active site n=3 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090LYB0_OSTTA)

HSP 1 Score: 90.5 bits (223), Expect = 1.640e-15
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 1 
Query: 1189 LWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPLGPDGKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYF 1596
            LW   PE+++     +GP+ D+W+ GC+ A+L  GKPI  G++  +Q++ +FK CGSP    WP+ +K P  +H        +   +  RL +V +          P+  DLL+  L LD   R+SA+DAL   +F
Sbjct:  230 LWYRPPELLLGATQ-YGPSVDMWSAGCIFAELIHGKPILPGKSEMEQMDIIFKLCGSPTPENWPDADKLPYAKHFT------QKKTYPRRLREVFSQ-------FTPSAKDLLEKFLTLDPAKRISAKDALMHDWF 351
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.790e-15
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 1 
Query: 1189 LWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPLG--PDGKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYF 1596
            LW   PE+++     +GP+ D W VGC+ A+L +GKP+F  +   +QLE +FK CG+P   RWP   + P +  + P    PD      K  L +     G + +    A+ DL+  LL LD   R SA+ AL + YF
Sbjct:  198 LWYRPPELLLGATR-YGPSVDCWGVGCIFAELIIGKPLFPTKVELEQLEAIFKVCGTPDSRRWPAHEELPSFSTMMPKNKYPD----QLKQHLTETARTAGTEKLLTSEAI-DLISRLLTLDPSRRTSAKQALETRYF 329
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Match: Hypothetical (protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T4S1_9CHLO)

HSP 1 Score: 89.7 bits (221), Expect = 3.050e-15
Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = 1 
Query: 1189 LWGMAPEVIVDHKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPLGPDGKSLHFKPRLDKVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYF 1596
            LW   PE+++     +GP+ D+W+ GC+ A+L  GKPI  G+   +QL+ +F+ CG+P    WP+ +K P  +H +      +  H+  RL +V A          P+  DL++  L LD   R++A  AL S +F
Sbjct:  239 LWYRPPELLLGATQ-YGPSVDMWSAGCIFAELVHGKPILPGKGEMEQLDLIFRLCGTPTPENWPDADKLPYAKHFK------QKKHYPRRLREVFAR-------FSPSAKDLVERFLTLDPAKRITAIQALDSDWF 360
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig949.17522.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Possible0.000e+092.29Cdc2-related protein kinase n=2 Tax=Ectocarpus Tax... [more]
Uncharacterized5.490e-2394.74protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Protein5.620e-1927.54kinase domain-containing protein n=1 Tax=Thalassio... [more]
Protein3.630e-1838.24kinase domain-containing protein n=2 Tax=Corchorus... [more]
Hypothetical2.360e-1726.21protein n=1 Tax=Skeletonema marinoi TaxID=267567 R... [more]
Protein5.810e-1735.29kinase domain-containing protein n=1 Tax=Chara bra... [more]
Protein6.840e-1725.75kinase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=... [more]
Serine/threonine-protein1.640e-1533.82kinase, active site n=3 Tax=Ostreococcus tauri Tax... [more]
Protein1.790e-1535.51kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Hypothetical3.050e-1533.09protein n=2 Tax=Ostreococcus sp. 'lucimarinus' Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig949contigE_fasciculatus_S2_contig949:20447..25652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score939.9
Seed ortholog evalue5.4e-271
Seed eggNOG ortholog2880.D8LK48
Model size1653
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K00924,ko:K06101,ko:K11423,ko:K16675
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04391,map00310,map04391
Hectar predicted targeting categoryother localisation
Exons10
EggNOG free text desc.uterine gland development
EggNOG OGsCOG2940@1,KOG0594@1,KOG0594@2759,KOG1083@2759
EC2.1.1.43,2.3.1.225
Cds size1632
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig949.17522.1prot_E_fasciculatus_S2_contig949.17522.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig949 20468..25652 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842597.3388317-UTR-E_fasciculatus_S2_contig949:20446..204671696842597.3388317-UTR-E_fasciculatus_S2_contig949:20446..20467Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig949 20447..20467 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842597.3543906-CDS-E_fasciculatus_S2_contig949:20467..205991696842597.3543906-CDS-E_fasciculatus_S2_contig949:20467..20599Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 20468..20599 +
1696842597.3679664-CDS-E_fasciculatus_S2_contig949:21393..215341696842597.3679664-CDS-E_fasciculatus_S2_contig949:21393..21534Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 21394..21534 +
1696842597.379769-CDS-E_fasciculatus_S2_contig949:21900..220361696842597.379769-CDS-E_fasciculatus_S2_contig949:21900..22036Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 21901..22036 +
1696842597.3975773-CDS-E_fasciculatus_S2_contig949:22329..226071696842597.3975773-CDS-E_fasciculatus_S2_contig949:22329..22607Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 22330..22607 +
1696842597.4171567-CDS-E_fasciculatus_S2_contig949:23123..233211696842597.4171567-CDS-E_fasciculatus_S2_contig949:23123..23321Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 23124..23321 +
1696842597.435494-CDS-E_fasciculatus_S2_contig949:23760..239071696842597.435494-CDS-E_fasciculatus_S2_contig949:23760..23907Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 23761..23907 +
1696842597.445205-CDS-E_fasciculatus_S2_contig949:24092..241821696842597.445205-CDS-E_fasciculatus_S2_contig949:24092..24182Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 24093..24182 +
1696842597.4575362-CDS-E_fasciculatus_S2_contig949:24468..245901696842597.4575362-CDS-E_fasciculatus_S2_contig949:24468..24590Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 24469..24590 +
1696842597.4782104-CDS-E_fasciculatus_S2_contig949:24942..251441696842597.4782104-CDS-E_fasciculatus_S2_contig949:24942..25144Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 24943..25144 +
1696842597.4902003-CDS-E_fasciculatus_S2_contig949:25466..256521696842597.4902003-CDS-E_fasciculatus_S2_contig949:25466..25652Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig949 25467..25652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig949.17522.1

>prot_E_fasciculatus_S2_contig949.17522.1 ID=prot_E_fasciculatus_S2_contig949.17522.1|Name=mRNA_E_fasciculatus_S2_contig949.17522.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=544bp
MMRKAQDRAGLHGGLGGLQGMKGLAGFGATLASNKFVRAAIREDTLKAAG
LRCLLPALDAWKGSTVKGPLPRVDEGRIMEIYLQRWPADKKEMDMASGFS
SSGVAELALFQEMHSYSTSTTGHSTLLVPFAVVKGTGLKPPAKIGAPGSS
KASSDRNNAGKLDKGAGAAAEGVPLAADERTTAVIGMHDPLGIAGVPMTL
GLQQGADADSAAGGGGGGEGDGEKASLSKIPEELLKPSYLLLEPVRYTLA
EILRLCRRPMVLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSV
SGCLKLGCLTQAMMVAPKDAATTPIEGMNGMDEDVEGEIDMEVEETPAGR
KAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVD
HKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQG
RWPEGNKAPLYRHLRPLGPDGKSLHFKPRLDKVLAAEGNKGVPLDPALAD
LLQGLLKLDSRHRLSARDALASPYFAPRQGQHDERVRALRSPA*
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mRNA from alignment at E_fasciculatus_S2_contig949:20447..25652+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig949.17522.1 ID=mRNA_E_fasciculatus_S2_contig949.17522.1|Name=mRNA_E_fasciculatus_S2_contig949.17522.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5206bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig949:20447..25652+ (Ectocarpus fasciculatus EfasUO2)
CTGTGGACCACCGACCTGCTCATGATGAGAAAGGCCCAGGATAGAGCAGG
CCTGCACGGCGGGCTTGGAGGGTTGCAGGGCATGAAGGGGCTGGCGGGGT
TCGGAGCCACGCTGGCGTCCAACAAGTTCGTGCGCGCGGCTATCCGGGAA
GATGTGCGTTGACTATTCCCTCTTGTTGCTCTTGGTTCTGGGTAGTCGGG
CAGCACCATCCATCCACCACTCATCTGTGCAGCTATATGCGATCAGTTGT
GAATAAGAAGGGTGTGGACGTGGGGAAATTTCACAAAGGGGGCACCGTGG
CATAAAATGGGGGTACCTTGGCGCAAAAATGGGGGGCAACGTGGTGAGGT
GGTGATATGGGGGTCTCCGTAGTGAGAAATGGGGGGCACCGTGGTGATAT
GTAGGGGGCTCCGCGGAGAAAATCGAGGGCACCATGCCGATTTAGGGGGC
TCCGTGGATCATTTTGGTCAAAAATGTCGCATTTTCCCAAAAATGAAAAA
AAAACTCTGCAGCTATCGACGTAGCTCGACGAGGCGATCATGAATATCGT
TGTTTCGCGTTTCAATTTTTTTTCCTTAAAAAGATATCGCACAAAACGTG
AATGGACAATTTGTTGTGCATGAACCGTACTATACTATACTATACACGTG
ACCGAGGACGCGCAGCCACGTCCTTGGCAACAATTACGTATTCGACCGCA
GTGGGGTTTCATGAAGGAGCGCTTTTTTATGGTTTTGGTGCACTGAGGCC
TGCAGTACTCGCAGGCGTTCCCTATTTTTTCTGTAGAATGTGCACAATAG
CCTTGACATGTTGGAAGCAAGCGACCAACATAGGATAGCGCTTTGCAAAT
TTCCAAAGCCTACCACAAGTATGCGCAGCACGAGTGGTTCGATGCTCTTT
GTTTGTTTATGCCCACGTCCCGCACGACGTATTTTTTGCGACGCCAGACC
CTCAAGGCCGCCGGGTTGAGGTGTCTCCTTCCTGCTCTAGACGCCTGGAA
AGGGTCTACCGTAAAAGGACCGCTCCCCAGAGTAGACGAGGGCCGGATCA
TGGAGATTTATTTGCAGAGGTGGCCGGCGGATAAAAAGGTGCGATTTTTC
TCTCTCTTGCTCCCGATGGGCTGCATTCGGCACATTTGGTATCTACAGTA
CGTAGGTCGTGTTCACGAGTATTCGAGAGCCAATCGGGTATGCGGACGTG
TTTTGGAGTACTGTATTGCTGTTACGTGGAGGTCGGGACGTTGTTGTGCT
CATGTTTGGAGGAATGTGGCCCATGTTCACGCATCAATTTTGCTGTTGAA
TACACATGGAACTTCTTTCACTACTCCGTTTATGTCAATATCTAGCACCT
TACATCTGTGCAACCTGTGTTTTTTGTTGTCGACGTGTTCGGCGCATTCT
GCCTGTGATCCGGTTGCGTTGTGTGCGTTTGTCGCGTTGCCTGGGTCTGC
GTAGGAGATGGACATGGCCAGCGGCTTCAGCTCGTCGGGAGTGGCTGAAC
TGGCGCTGTTTCAAGAGATGCACTCCTACAGCACCAGCACTACTGGACAC
AGCACCCTGCTCGTGCCCTTCGCGGTGGTGAAGGGAACAGGTAAAATAGA
TGCCCGCTATTTTCCACGTTCCTCCTAGGGATGGTGACGATGGGTACCAC
GAAGGGGTATGATATGGCATGTCTCGCCAAAGACACGAAGGTCAAAGTTG
GTGCTGCAAGGGTGCCAAACACGAACCATTGTGGTGCGCCAGGGCTCCGG
CATGTGCACTAGCTTAGTTCCACCCGTGTGCCTCTTCGTCCGTGCAGTTT
TTTTTTTTCATGTTTGGCCGCATCCTGTGTGGTAACGCGTGTTTCTCTGT
CGATGTCTTTGACACTGCTTGCTCTTTTGTCAGGGCTCAAGCCACCGGCG
AAGATCGGAGCACCAGGGTCTTCCAAGGCCTCGTCCGACCGAAACAATGC
CGGAAAGCTGGACAAAGGTGCCGGAGCTGCTGCCGAAGGCGTGCCCCTCG
CGGCGGACGAGAGAACCACGGCCGTGATAGGCATGCATGACCCTCTGGGC
ATCGCCGGCGTGCCGATGACGCTGGGTTTGCAGCAAGGGGCCGACGCCGA
TTCGGCTGCCGGCGGAGGTGGAGGTGGCGAGGGAGACGGGGAGAAGGCGA
GCCTTTCGAAGGTGAGGTGTAAGGTTTGAGATCGCTCGGTTGATTTATTC
AAGAGCTTTTTCTTTGGAGTTTGGTATTTCTTCCCGTGCGATGCGTGTTT
GACGAGTGGCTTCAAACGGCGGCTGTTTTGGCCCGGTAAGGCAGGAGGAA
CGTGCTCGCTTTTCGTGGAGTCAGTCAATGAACACCTGGCGTCGTGTACC
ACCTGCGGCTGGCTCTTCGTCGTGACGTTGGGAGATGAGAGCTTGGACAA
GCCTGTGCGCGTCCTAGTGCTGTACCCAGCCGCCAGTCAAAGGATAAGGA
TCATCCCTCGCCTCGCACCACGGCTCTTTTTCCCAGCCCCCTCGCGAGGT
CTATGGTCTAACGACTACGGCATGCATGATACTGAGTACACCCCCCCCCC
CCCCCCCCACCCCCTCGGGTCACCGACGTTACATAGCATAGCTCACTAGT
GCCGGCCGATGCCCCCCTACTGGCATGTCTTGTCTCCTGCTGATTTTTGA
TTGGTTTGCCATCCGACCGTTTCAAAGATACCGGAGGAGCTCCTCAAGCC
GAGCTACTTGCTTCTGGAGCCTGTTCGCTACACGCTCGCTGAGATCTTGA
GGCTCTGTCGCCGCCCGATGGTCCTCCCTGGACCCCTAGTGCGATCCATG
CTGCAAGACCTGTTGGGTGCGGTCGCTCTCTGCCATGATCGCAACGTCGT
CATCAAGTCCTTGGACGCAGAAAAGGTGAGGGTGGTTGTTTTTCAGTGCG
GCGAATTGCGGATGTAGTACTGTACCTCGATGCACGTTGCGATACACGTC
ACTCGATTTTTATTTCTCAACTGCTGTCGTGTTGAGCATTCAGTCCTTTA
ACAGCTGCAGATAGACGTGTGACTACGATTGACGCGCCTCCCTCGTGGCA
CCGAATCTTTGGTGGGCCAATGCTCTTCACAATTCCACCCTCTGCTTGTT
GTAATGGGTTGCTTGCTTTGTAACGACGACGATACCAGCGTGGCTGCCGA
GAGGAAACACACCGATGGCGCGATTGGCTTGACTTTCTAGTTGCCGGTAT
CCCACGAGTTCCTCCCTCCCACCAGGCAGTGTTTTCATCGGACATGTCGT
GACGTGCTTGTGCGAGCGGCACTTTTTTTTGTGCGTTTATGCAATCTGTC
TGGTTTTGTCCCAGGTGTATCTCAGTGTATCGGGCTGCCTGAAGCTGGGA
TGCTTGACCCAGGCCATGATGGTGGCCCCCAAGGATGCCGCGACTACACC
CATCGAGGGGATGAATGGTATGGATGAAGACGTGGAAGGAGAGATCGACA
TGGAGGTTGAGGTGAGGAAAGCCCCCCACGAAATATACGATGCGTCGTTT
CAAATGCGTACATTGTTGCACATGTATCAGGGCCGCGTGTCCTTGTATCT
ACTTCGCAACGGCCTTTCCTTGTCTGGTGATACTGACATCTTGACACCCC
GTATTTGTCCTCGCCGCCTCCTCTCCCCTGGTGTGGATGCTCTCAGGAGA
CCCCGGCCGGCCGTAAGGCGGCGCACAGAGAAGGAAAGTTGCGGATGAAG
CAGGAAAAGCTGCAGAGAGAGAACGCCTGTAAAAAGGTGAACGTCCAGCT
TGTACTGTATCGACGGTGTTGCTTGCGTGCGTGACGAATTGGCAGCGTTT
CGTGCATGCAGGCAGGCGTGACGGTGGTGGTTCTAGGGTCAGCTTCTTCT
CCTTCTTCTTCTTCTTCTTCTGGTCACACCGCAGCACGGTAACGTTGGCC
ACCTCCCTCCTCCCTCCCTCTTTACTGTTAGGTGATGGCGCACCGTGTTG
AAGAATGCACTAACCAATGCCCACAACGAACAATCCGTCTCTATACCTCT
CGGTTACACCCTTGCAAAAAAGGCTGTTGCGGCTGTGACGAAAGACGGGG
AGCCGGCTAAGACGGTGCTATGGGGTATGGCTCCAGAGGTTATCGTGGAC
CACAAGCATCCCCATGGTCCTGCAACGGACATCTGGGCAGTGGGGTGAGA
TTGCCCCCCGATTCTCGCTGTTTCCCGTCAAGTTAGGGGCACACGGGCAT
CAATATCATTCGCTCACGTACATAGTTAATAAAGACGCTGTTTTGCATTC
ACTAGTTCGGCGGCGTGTAGATAAGACAAGAGGCTTCGGTTGGTGTGCCG
GTCTCTGTTCTGCCCAAGCTATCGGAGTGTCGGCGGTCAAGTTGGCAACG
GTGGCGGGCAATCCTTTCGGATCGCTCCGCATACATTTCGTGCCATGTGA
CAGGCTCTCATTTGTCCGTTGCCGCACCTTGACATGATCGAACCGGACCC
TTACGCACTCCCCCGGCCGGGCCCCACCCGGGTCTTGATTCGCCAGGTGC
CTCGCTGCGCAGCTTGCCCTGGGTAAACCCATATTCGGCGGTCGTACGCG
CAAGCAGCAACTGGAGTACGTTTTCAAGTGCTGTGGTTCTCCAGGCCAGG
GTCGGTGGCCGGAGGGGAACAAAGCCCCTCTGTACAGGCACTTGCGGCCC
TTGGGCCCGGACGGCAAGAGCCTTCACTTCAAACCCCGCCTCGACAAGGT
ACGGCAGCGTTGGGTCTCCGCAGTCTGTAGGCATGTCTCATGTCTCCTCA
AAGTCAAATGTACACTATTTAGTCTCTACAAATAGCTGAATGAGTTTTTC
ACATTGCTTTCACTCAGCCGCAGCAGCTCTGCAAGGTTATTCACGAACCG
ATGCCTATCTGGAAGAAGTTTTATTTTTTGATCGAGTTCTTGGCCGCTAG
GACTGCGCGCTCCCCCCCCGTCCTCTATCGTCTTCTGTCTCATTCATACC
CTCGCGCGTGCAACCACCAAACGATGGCCTTCTTTCTTTCTCGTCTCGTT
TGTATCCGCTGAAACTGAAGGTTCTTGCAGCGGAGGGGAACAAAGGCGTT
CCCCTCGACCCAGCGCTGGCGGACTTGCTGCAAGGTCTCCTCAAGCTCGA
TTCGCGGCATCGCCTGAGTGCGAGGGATGCCCTGGCCAGCCCTTACTTTG
CGCCCAGGCAAGGGCAGCATGACGAAAGGGTGAGAGCACTGAGGAGTCCC
GCTTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig949:20447..25652+

>mRNA_E_fasciculatus_S2_contig949.17522.1 ID=mRNA_E_fasciculatus_S2_contig949.17522.1|Name=mRNA_E_fasciculatus_S2_contig949.17522.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1632bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig949:20447..25652+ (Ectocarpus fasciculatus EfasUO2)
ATGATGAGAAAGGCCCAGGATAGAGCAGGCCTGCACGGCGGGCTTGGAGG
GTTGCAGGGCATGAAGGGGCTGGCGGGGTTCGGAGCCACGCTGGCGTCCA
ACAAGTTCGTGCGCGCGGCTATCCGGGAAGATACCCTCAAGGCCGCCGGG
TTGAGGTGTCTCCTTCCTGCTCTAGACGCCTGGAAAGGGTCTACCGTAAA
AGGACCGCTCCCCAGAGTAGACGAGGGCCGGATCATGGAGATTTATTTGC
AGAGGTGGCCGGCGGATAAAAAGGAGATGGACATGGCCAGCGGCTTCAGC
TCGTCGGGAGTGGCTGAACTGGCGCTGTTTCAAGAGATGCACTCCTACAG
CACCAGCACTACTGGACACAGCACCCTGCTCGTGCCCTTCGCGGTGGTGA
AGGGAACAGGGCTCAAGCCACCGGCGAAGATCGGAGCACCAGGGTCTTCC
AAGGCCTCGTCCGACCGAAACAATGCCGGAAAGCTGGACAAAGGTGCCGG
AGCTGCTGCCGAAGGCGTGCCCCTCGCGGCGGACGAGAGAACCACGGCCG
TGATAGGCATGCATGACCCTCTGGGCATCGCCGGCGTGCCGATGACGCTG
GGTTTGCAGCAAGGGGCCGACGCCGATTCGGCTGCCGGCGGAGGTGGAGG
TGGCGAGGGAGACGGGGAGAAGGCGAGCCTTTCGAAGATACCGGAGGAGC
TCCTCAAGCCGAGCTACTTGCTTCTGGAGCCTGTTCGCTACACGCTCGCT
GAGATCTTGAGGCTCTGTCGCCGCCCGATGGTCCTCCCTGGACCCCTAGT
GCGATCCATGCTGCAAGACCTGTTGGGTGCGGTCGCTCTCTGCCATGATC
GCAACGTCGTCATCAAGTCCTTGGACGCAGAAAAGGTGTATCTCAGTGTA
TCGGGCTGCCTGAAGCTGGGATGCTTGACCCAGGCCATGATGGTGGCCCC
CAAGGATGCCGCGACTACACCCATCGAGGGGATGAATGGTATGGATGAAG
ACGTGGAAGGAGAGATCGACATGGAGGTTGAGGAGACCCCGGCCGGCCGT
AAGGCGGCGCACAGAGAAGGAAAGTTGCGGATGAAGCAGGAAAAGCTGCA
GAGAGAGAACGCCTGTAAAAAGGCTGTTGCGGCTGTGACGAAAGACGGGG
AGCCGGCTAAGACGGTGCTATGGGGTATGGCTCCAGAGGTTATCGTGGAC
CACAAGCATCCCCATGGTCCTGCAACGGACATCTGGGCAGTGGGGTGCCT
CGCTGCGCAGCTTGCCCTGGGTAAACCCATATTCGGCGGTCGTACGCGCA
AGCAGCAACTGGAGTACGTTTTCAAGTGCTGTGGTTCTCCAGGCCAGGGT
CGGTGGCCGGAGGGGAACAAAGCCCCTCTGTACAGGCACTTGCGGCCCTT
GGGCCCGGACGGCAAGAGCCTTCACTTCAAACCCCGCCTCGACAAGGTTC
TTGCAGCGGAGGGGAACAAAGGCGTTCCCCTCGACCCAGCGCTGGCGGAC
TTGCTGCAAGGTCTCCTCAAGCTCGATTCGCGGCATCGCCTGAGTGCGAG
GGATGCCCTGGCCAGCCCTTACTTTGCGCCCAGGCAAGGGCAGCATGACG
AAAGGGTGAGAGCACTGAGGAGTCCCGCTTAG
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