mRNA_E_fasciculatus_S2_contig948.17510.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM85_ECTSI) HSP 1 Score: 358 bits (920), Expect = 4.160e-119 Identity = 217/254 (85.43%), Postives = 222/254 (87.40%), Query Frame = 1
Query: 286 VGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRTPRINAVERRVNGTSLEPPSESRQXXXXXXXXXXXXXXXXXXXPGRQRLSRENESLLEVRALSPSRVRVRKLDWTAYDHDVTEEWEEAGEGVRGWWXXXPGPGDDRPGXXXXXXXXXXXXXXXXXXXXXXPSTPEGAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTR 1047
VGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN TPRI+AVE R NGTSLEPPSES++XXXXXXXXXXXXXX GRQRL RENESLLEVR LSPSRVRVRKLDWTAYDHD TE WEE GEG+RGWW PG G DR XXXXXXXXXXXX PSTP+ AGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTR
Sbjct: 33 VGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINHTPRIDAVECRGNGTSLEPPSESQEXXXXXXXXXXXXXX------GRQRLGRENESLLEVRPLSPSRVRVRKLDWTAYDHDATEAWEEGGEGLRGWWWDDPGRGGDR-----XXXXXXXXXXXXRATTTTTPSTPQDAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTR 275
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW0_9PHAE) HSP 1 Score: 349 bits (895), Expect = 2.360e-115 Identity = 209/258 (81.01%), Postives = 215/258 (83.33%), Query Frame = 1
Query: 289 GGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRTPRINAVERRVNGTSLEPPSESRQXXXXXXXXXXXXXXXXXXXPGRQRLSRENESLLEVRALSPSRVRVRKLDWTAYDHDVTEEWEEAGEGVRGWWXXXPGPGDDRPGXXXXXXXXXXXXXXXXXXXXXXPSTPEGAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTRQARGP 1062
GGDIWCAALLLSAWLLENPQLVQGT VLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINR PRI AVE R N TS PSES++XXXXXXXXXXXXXXXXXX GRQR SRE +SLLEVR LSPSRVRVRKLDWTAYDH+ TEEWEE GEG+RG W PGPGDDRPG PSTPE AGATLRCDVAIGSALVYSPHHACVADVLSRAFA+GGCRAGYILQLSTRQARGP
Sbjct: 17 GGDIWCAALLLSAWLLENPQLVQGTTVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRAPRIVAVEWRGNETSQGAPSESQEXXXXXXXXXXXXXXXXXX--GRQRPSRE-KSLLEVRPLSPSRVRVRKLDWTAYDHEATEEWEEGGEGLRGCWWDDPGPGDDRPGKQEDRGGAEKRATTTTT-----PSTPEDAGATLRCDVAIGSALVYSPHHACVADVLSRAFASGGCRAGYILQLSTRQARGP 266
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZXQ6_DICPU) HSP 1 Score: 83.2 bits (204), Expect = 1.440e-14 Identity = 36/73 (49.32%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 274 VMSGVGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 492
+ G+G IW AA++LS W+ +N +G VLELGSG+GL GI++ Y +K+VTLTDY++ L+ NL++NV++N
Sbjct: 54 IEGGIGCSIWDAAIILSRWIYKNQNAFEGQSVLELGSGVGLPGILSAYYAKNVTLTDYLNPLVENLKYNVELN 126
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QEN1_CAVFA) HSP 1 Score: 82.4 bits (202), Expect = 2.210e-14 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 274 VMSGVGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 492
+ G+G IW AA++ S W+ +N Q+ G +VLELGSG+GL GI+A Y + VTL+DY+ L+ NL++NVD+N
Sbjct: 54 IQGGIGCAIWDAAIIFSRWVYKNTQVFDGQKVLELGSGVGLPGILASYYAAHVTLSDYLPPLIENLQYNVDLN 126
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAM5_9MYCE) HSP 1 Score: 80.5 bits (197), Expect = 1.310e-13 Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 274 VMSGVGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 492
+ G+G IW AA++LS W+ +P+ VLELGSG+GL GI++ Y + VTLTDY++ L+ NL++NVD+N
Sbjct: 54 IQGGIGCAIWDAAIILSRWIYAHPEAFTNKSVLELGSGVGLPGILSSYYANDVTLTDYLEPLIDNLKYNVDLN 126
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B3S1_POLPP) HSP 1 Score: 80.1 bits (196), Expect = 1.690e-13 Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 274 VMSGVGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 492
+ G+G IW AA+++S W+ ++ G + LELGSG+GL GI+A + +S+TLTDY+ LL NL++NVD+N
Sbjct: 54 IQGGIGCAIWDAAIIMSRWIFKHQDAFSGQKCLELGSGVGLTGILAAHFCQSITLTDYLPPLLENLKYNVDLN 126
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Methyltransferase (n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1SZ50_GIAMU) HSP 1 Score: 78.6 bits (192), Expect = 1.090e-12 Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 286 VGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 492
VG +W AA+++S +L+ +P+++QG RVLELGSG+GL G++A S V LTDY + +L NLE+N+ +N
Sbjct: 53 VGCGVWDAAIIMSRYLITHPEVLQGKRVLELGSGVGLTGLIASRFSDEVVLTDYSESILENLEYNIWLN 121
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4VA45_9MYCE) HSP 1 Score: 77.8 bits (190), Expect = 1.100e-12 Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 274 VMSGVGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 492
+ G+G IW AA+++S W+ +N + VLELGSG+GL GI++ Y +K VTLTDY+ L+ NL +N+++N
Sbjct: 54 IEGGIGCSIWDAAIIISRWIFKNNTVFNNQTVLELGSGVGLPGILSAYYAKHVTLTDYLPPLIENLNYNIELN 126
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Uncharacterized (protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XER1_MARPO) HSP 1 Score: 78.6 bits (192), Expect = 2.040e-12 Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 283 GVGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKS-VTLTDYVDELLVNLEHNVDINRTPR 504
GVG +W ALLLS L+E P LV+ RVLELGSG GLCG++A L S V LTDY+ LL+NL NV + R R
Sbjct: 133 GVGWKVWGGALLLSLRLIEIPSLVKNKRVLELGSGCGLCGLLASKLGASEVVLTDYLPSLLLNLRRNVSLFRNQR 207
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Match: Methyltransferase (type 12 domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PU76_CAVFA) HSP 1 Score: 76.6 bits (187), Expect = 6.890e-12 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 283 GVGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 492
GV +W + L+ W+L+NP + +G VLELGSG+G+CGI AG +SK+V +TDY D+++ L+ NV N
Sbjct: 180 GVAWRVWDGGIGLAKWVLDNPSIFEGKDVLELGSGVGVCGIAAGLISKNVLVTDYTDKIIQALQDNVKRN 249 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig948.17510.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig948.17510.1 >prot_E_fasciculatus_S2_contig948.17510.1 ID=prot_E_fasciculatus_S2_contig948.17510.1|Name=mRNA_E_fasciculatus_S2_contig948.17510.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=354bp QDRALPEGTPVTEHSLAAVLGSEREVSVPLFRGSDRRRNAGCTEEVIGGGback to top mRNA from alignment at E_fasciculatus_S2_contig948:795..3393+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig948.17510.1 ID=mRNA_E_fasciculatus_S2_contig948.17510.1|Name=mRNA_E_fasciculatus_S2_contig948.17510.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2599bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig948:795..3393+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig948:795..3393+ >mRNA_E_fasciculatus_S2_contig948.17510.1 ID=mRNA_E_fasciculatus_S2_contig948.17510.1|Name=mRNA_E_fasciculatus_S2_contig948.17510.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1062bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig948:795..3393+ (Ectocarpus fasciculatus EfasUO2)back to top |