mRNA_E_fasciculatus_S2_contig9476.17507.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: TKL (family protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI20_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 6.850e-125 Identity = 399/665 (60.00%), Postives = 408/665 (61.35%), Query Frame = 1
Query: 691 EAPVWRPVSLEKAKSETSTAATAPPPTDRRTRPERATTTCTLLASVGDGFLQGGSVQDSCS-VNSGCFDQGSISG------WGGGSVCASXXXXXXXXXXXXXXXXXASGRKAVASVTPRSTASAPMFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEXXXXRPTPSRRRQRSCGGVPVXXXXXXXXXXXXAVS------WAEVEALALTSIVPAVREAADSVACLMKASSGXXXXG-EWVGWCGSVARTLRRAVRVLAKATAHDEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGGGXXXXXXGELGSPGRSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVSGAIDGGSGDSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMPLNDRALRGIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKV 2643
+APVWRPVS EKAKSE STAA PP RRT P R TTCTLLASVG FLQ GS QDSCS VNSGCFDQGS SG XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX XXXXXX XXXX PT RQRS GGVP+XXXXXXXXXXXX WAEVEALALTSIVPAVREAADSVA LMKAS GXXXX WVGWCGSVARTLRRAVRVLAKATAHDEQVERVLMEDIQESICEMSEIMQ YASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGY S SS+SLLE SDRHSRMQRRSSQEILEDSKTRLREWRLH VEIPATEVEVVGDEVLGDGXXXXXXXXXXXX + + VSTTVYLGSC+GLNAA+K FSFKGG XXXXXXXXXXXXXXXXX L+DRALR IVGDVCSGMAHLADLGFVHGGLSSSNVLLDA GRAK+
Sbjct: 50 QAPVWRPVSFEKAKSEPSTAA---PPPARRTTPGRPGTTCTLLASVGPSFLQAGSAQDSCSSVNSGCFDQGSSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPRSLPPPHGIPNSRSSGRPLRHHGQXXXXXXXXXXXXHPT----RQRSSGGVPLXXXXXXXXXXXXXXXXXXXXXWAEVEALALTSIVPAVREAADSVARLMKASGGXXXXXXNWVGWCGSVARTLRRAVRVLAKATAHDEQVERVLMEDIQESICEMSEIMQCYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYSGGS----SSSSLLEASDRHSRMQRRSSQEILEDSKTRLREWRLHQVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXSEDKRN--STVSTTVYLGSCMGLNAAVKAFSFKGG---------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXLDDRALRRIVGDVCSGMAHLADLGFVHGGLSSSNVLLDARGRAKI 572
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: Putative (Leucine Rich Repeat Protein Kinase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP4_ECTSI) HSP 1 Score: 130 bits (327), Expect = 3.830e-27 Identity = 116/305 (38.03%), Postives = 159/305 (52.13%), Query Frame = 1
Query: 1327 AEVEALALTSIVPAVREAADSVACLMKASSGXXXXG----EWVGWCGSVARTLRRAVRVLAKATAH--DEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGGGXXXXXXGELGSPGRSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVS 2223
A EALA S P VREAA VA L++ +S G + WC S+ TL RA VLAK A D+Q RVL++D+Q+SI ++ +I++SY S+ + + F S LC +RQ EAE+AI A QRL+L ++VR G +S + L + +R+S+E SK + R+ R+ +EIPA++VEV +EVLG G FG TVYL GLNAA KV S EH+ RQR +RE+E+++RLRGPH VTI+G V S
Sbjct: 425 ASAEALAQQSFFPGVREAASVVAGLVRLASDHKSNGRESEKRARWCRSIVHTLERAGEVLAKVKAGRGDDQAVRVLLDDVQDSIADLLQIIESYKSKN-ALSKVFVSSLCKKRQEEAEVAINAAVQRLQLGLQVRVGQDLASVGEAVQEGL--------NLHQRASEESGMVSKKKRRQHRMDQLEIPASDVEVT-NEVLG-----------------RGGFG-----TVYLADLHGLNAAAKVVS---------------------REHQ---RQRRM-FMRELEAMKRLRGPHTVTIYGAVTS 672
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW8_9PHAE) HSP 1 Score: 122 bits (306), Expect = 5.270e-27 Identity = 97/123 (78.86%), Postives = 103/123 (83.74%), Query Frame = 1
Query: 1 MDVTLLAALGGGLVFLAVLALTAYCYVRGGGRICGXXXXXXXXXXXXXXAQRRGSXXXXXXXXXRRGSGQPAQSFPRAFMPISMAPSSWTTVENGGVEEDGGIDDNTLAGTNPLFSLTNQDDR 369
M V LLAALGGGLVFLAVLA TA+CY RGGG IC XXXXXXXXXXXXXX XXXXXXXXX G G PAQSFPRAFMPIS+ PSSWTTVE+GGVEEDG I+++ LAGTNPLFSLT QDDR
Sbjct: 1 MAVILLAALGGGLVFLAVLAWTAHCYFRGGG-ICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSG-GHPAQSFPRAFMPISVVPSSWTTVEDGGVEEDGNIENDALAGTNPLFSLTPQDDR 121
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: Two (component regulator three Y domain protein/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP7_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.560e-26 Identity = 119/306 (38.89%), Postives = 158/306 (51.63%), Query Frame = 1
Query: 1327 AEVEALALTSIVPAVREAADSVACLMKASSGXXXXGEW----VGWCGSVARTLRRAVRVL---AKATAHDEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGGGXXXXXXGELGSPGRSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVS 2223
A EALA S P VREAA VA L+ +S G+ WC S+ TL RA VL AKA D Q VL++D+Q+SI ++ +I++SY S+ + + F S LC +RQ EAE+AI A QRL+L ++VR G +S + + E D H RR+SQE +K + R+ RL +EIPA++VEV +EVLG G FG TVYL GLNAA KV S EH+ RQR +RE+E+++RLRGPH VTI+G V S
Sbjct: 413 AGAEALAQQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGKEAKAGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKN-ALSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVRVGQNLASVGEA----VQEGLDLH----RRASQESEMVTKKKRRQHRLDQLEIPASDVEVT-NEVLG-----------------RGGFG-----TVYLADLHGLNAAAKVVS---------------------REHQ---RQRRM-FMRELEAMKRLRGPHTVTIYGAVTS 661
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI4_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.780e-20 Identity = 147/505 (29.11%), Postives = 190/505 (37.62%), Query Frame = 1
Query: 1327 AEVEALALTSIVPAVREAADSVACLMKASSGXXXXGEW----VGWCGSVARTLRRAVRVLAKATAH-----DEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGG------------------GXXXXXXGELGSPG---------------------------------------RSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVSGAIDGGSGDSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMPLNDRALRGIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKV 2643
A EALA S P VREAA VA L+ +S G+ WC S+ TL RA VL KA D Q VL++D+Q+SI ++ +I++SY S+ S + F S LC +RQ EAE+AI A QRL+L ++V G +S + + E + H R R S + + K R R+ RL +EIPA++VEV +EVLG G FG TVYL GLNAA KV F+ G G L G R S + RQR +RE+E+++RLRG H VTI+G V S A PL ++ LR IV DVC GMA L VHG L S+NVL DA GRAK+
Sbjct: 550 AGAEALAEQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGKAREAKGGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKN-SLSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVHVGQNLASVGEA----VQEGINFHRRASRASWESEMVTKKKR-RQHRLDQLEIPASDVEVT-NEVLG-----------------RGGFG-----TVYLADLHGLNAAAKVVVFEXXXXXXXEYDCTDCVSNGTDGVLDGGHGVLDCTGDGESXXXXXXXXXXXXXXXXXXXTESTTMPTDSQQQRLSRVSQQXXXXXRQRRM-FMRELEAMKRLRGLHTVTIYGAVTS--------------------------------------------------------------------LPDRLVLVMELLQGGDLRHRLKKAKEPLEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKI 956
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB8_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 2.890e-15 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 1
Query: 2497 ALMPLNDRALRGIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKV 2643
A MPL+DRALR IVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAK+
Sbjct: 46 APMPLDDRALRRIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKI 94
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B7_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 1.540e-6 Identity = 70/210 (33.33%), Postives = 101/210 (48.10%), Query Frame = 1
Query: 1447 WCGSVARTLRRAVRVLAKATAH---DEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSL-LEVSDRHSRMQRRSS--------QEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKV 2040
WC S+ TL RA VL K D Q RVL++D+Q+SI ++ +I++SY S+ + E F S LC +RQ EAE+A+ A Q V A + + ++ N+ LE+ R S+ +R S QE SK + + R+ ++I A++VE +EVLG G FG TVYL GLN KV
Sbjct: 137 WCRSIVHTLERAGEVLGKKVKTGRGDGQAVRVLLDDVQDSIADLLQIIESYKSKN-ALSEVFVSSLCKKRQEEAEVAMKTAVQSFHS-SSVEAHESLPNVAAATLNTAGLELHQRASKARRLSHNASPASCLQESAMMSKKKRGQHRMDQLQISASDVEGT-NEVLG-----------------RGGFG-----TVYLADLHGLNTVAKV 321
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK6_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 8.410e-6 Identity = 50/88 (56.82%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 1789 MQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFK 2052
MQRRSSQEILEDSKTRLREWR XXXXXXXXXXX + VSTTVYLGSC+GLNAA+K F F+
Sbjct: 1 MQRRSSQEILEDSKTRLREWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRN------STVSTTVYLGSCMGLNAAVKAFYFE 82 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9476.17507.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9476.17507.1 >prot_E_fasciculatus_S2_contig9476.17507.1 ID=prot_E_fasciculatus_S2_contig9476.17507.1|Name=mRNA_E_fasciculatus_S2_contig9476.17507.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=887bp MDVTLLAALGGGLVFLAVLALTAYCYVRGGGRICGGGGGGGGGKRNSRAAback to top mRNA from alignment at E_fasciculatus_S2_contig9476:1717..5899+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9476.17507.1 ID=mRNA_E_fasciculatus_S2_contig9476.17507.1|Name=mRNA_E_fasciculatus_S2_contig9476.17507.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4183bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9476:1717..5899+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9476:1717..5899+ >mRNA_E_fasciculatus_S2_contig9476.17507.1 ID=mRNA_E_fasciculatus_S2_contig9476.17507.1|Name=mRNA_E_fasciculatus_S2_contig9476.17507.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2661bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9476:1717..5899+ (Ectocarpus fasciculatus EfasUO2)back to top |