mRNA_E_fasciculatus_S2_contig9459.17493.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL5_9PHAE) HSP 1 Score: 696 bits (1795), Expect = 9.370e-251 Identity = 356/406 (87.68%), Postives = 363/406 (89.41%), Query Frame = 2
Query: 92 MTVAFRKASLFALLRLPCFAVWSNPRGKLLHQALRSRLTTAAAVTCSASXXXXXXXXXXXXXXXAATASTLLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQH---------LPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTALLEHLGTLGVEHRFKSSEC 1282
MTVAFRKAS+FALLRLPCFAVW NPR KLL ALR RL TAA TCSA+ A TASTLLVGSKQDAAGRAMA+ALLARG+WLETEPGVE DGTRNG+AYRHK SPTSLWLVEGRLLDLDDADRRWASASS G DEQ LPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLREL AAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWA+VLTRMLGLDGSPAGD+NWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR GGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARER ALLEHLGTLGVEHRFKSSEC
Sbjct: 1 MTVAFRKASIFALLRLPCFAVWPNPRSKLLQHALRRRLATAAT-TCSATASSSPTSHPPIPATTA-TASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEHDGTRNGRAYRHKLSPTSLWLVEGRLLDLDDADRRWASASSVGSADEQQSQQQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELCRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWASVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 404
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU1_ECTSI) HSP 1 Score: 615 bits (1587), Expect = 2.170e-220 Identity = 303/323 (93.81%), Postives = 307/323 (95.05%), Query Frame = 2
Query: 341 MADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQH---------LPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTALLEHLGTLGVEHRFKSSEC 1282
MA+ALLARG+WLETEPGVE DGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASS G TDE+ LPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELG AAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGD+NWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR GGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARER ALLEHLGTLGVEHRFKSSEC
Sbjct: 1 MAEALLARGNWLETEPGVERDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEKPSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 323
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C895_9STRA) HSP 1 Score: 264 bits (674), Expect = 6.770e-81 Identity = 155/381 (40.68%), Postives = 199/381 (52.23%), Query Frame = 2
Query: 299 TLLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLV--EGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSP-------------------------------------------------------AGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTALLEHLGTLGVEHRFK 1270
TL+V + D A M DA+LAR W + G + R +H ++W+V E ++ D+ D + S+ +DV+FLS+H A SG P+L HPIG+PNP+ +GG PG+CPPP+PR+A CLREL A AGL S F+ T E THHGPWL+TPAMF EIGS+EEHWGR DAAEVWANVL +L L +P A +W +L A RA F+ +GGGHYAPK GDLAR+ G + GHMLA+YA D+G GG WR AV EAV TR+A PG + ALVDKKAF+A ++ + L L V +K
Sbjct: 10 TLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQH---RELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSL------TDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGG---WRTAVAEAVAVTRSAMPGCR------LAALVDKKAFKAAQKREVESLLEELAVRVEYK 372
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: D-tyrosyl-tRNA(Tyr) (deacylase n=2 Tax=Archaea TaxID=2157 RepID=A0A432HW31_9ARCH) HSP 1 Score: 236 bits (602), Expect = 3.840e-71 Identity = 136/325 (41.85%), Postives = 179/325 (55.08%), Query Frame = 2
Query: 299 TLLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREGGE-----------GTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTALL 1231
TLL+ S +D A DALL RG W E +P E G+ +RH P +W R+L D D R+A+AS +V+FLS+H A SG P+L +H IGVP S S E GG G PP+PR A R + AA + + FD T+E THHGP L +P MF+EIGSSE HWGR DAAE WA+V++ LGLDG P G +W L + RA+ + IGGGHYAP+ D+ RR+ + GH +ASYAL+ R E G W A+ STR +FPG G V A +D+K+F+ +R A++
Sbjct: 5 TLLIVSAEDIASTVQGDALLGRGGWNEADPVEE------GRTWRHTSQPVHIWWFPERVLWADQLDERYAAASGA-------QVREVIFLSRHSAASGRPSLTLHVIGVPGESPVGESAEYGGIKGAVVPPNPRFAAWYRRMVQAAHDHAVTDEFDLTIETTHHGPSLSSPTMFIEIGSSESHWGRTDAAEAWADVISEGLGLDGGP-GLGDWHALSDSERAQSKVMLGIGGGHYAPRHIDVLRRTNCWAGHQIASYALEMQRPEDESWDPQTGDLPEGQWEHAIRVCAESTRQSFPG------GEVMAHLDRKSFKGWQRRAVI 309
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: D-tyrosyl-tRNA(Tyr) (deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842PJE0_9EURY) HSP 1 Score: 219 bits (559), Expect = 9.350e-65 Identity = 131/324 (40.43%), Postives = 178/324 (54.94%), Query Frame = 2
Query: 299 TLLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREGGE-----------GTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTAL 1228
TLL+ S+ D A DALLARG W E NG+++ H P LW R+L D+ + R+ S G G + + +V+FLS+H A SG+P+L +H IGVP S + E GG G P+PR A R + A E GL FD T+E THHGP L P MF+EIGSSE HW R DAAE WA+V++ LGLDGS G +W +L + + + IGGGHYAP+ D+ R++ + GH LA YAL+ R E G W+ ++ A+ ST+ AFPG G V A +D+K+F+ +R A+
Sbjct: 3 TLLIVSEPDIASTIQGDALLARGGWTEVTT------VENGRSWAHDRKPVHLWWFPDRVLMEDNLENRY---SDGSGANVK----EVIFLSRHFAASGLPSLTLHVIGVPGESPVGETAEFGGIKGEVVLPNPRFAEWYRRMHQAGIEHGLIPEFDMTIETTHHGPSLSVPTMFIEIGSSETHWDRRDAAEAWADVISEGLGLDGSN-GLGDWENLSSEQKGDAKVMLGIGGGHYAPRHTDVIRKTNCWAGHQLALYALEMTRPEDEDWDPITGVLPTGQWQHSIEVALESTKQAFPG------GQVIAHLDRKSFKGWQRQAV 306
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3I1_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.400e-64 Identity = 140/353 (39.66%), Postives = 185/353 (52.41%), Query Frame = 2
Query: 287 ATASTLLVGSKQDAAGRAMADALLARGSWLETEP-------GVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIG------VPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLAR-RSGSYVGHMLASYALDFGREGGEGTWREAVTEAVRSTRAAF--PGA------GGGVAGGVGALVDKKAFRARERTALLEHLGTLGVEHRFKSSE 1279
A+ + LL+ + +D A M ALLARG W E P PDG +N +W + L D D+ W +A E ++FLS+H A SG P+L +HPIG P + E GG PGRC PPSPR+A R+L A ++AGL +F+ TLE THHGPW P MFVEIGS EE WGR DAA VWA+VL + LGL + V+ PAA + V GGGHY PK DL R R VGH+LASY G E W+ + EA+++TR A+ P GG V +DKKAF++ R AL+++L + G++ FK ++
Sbjct: 32 ASGTILLLATTEDKASVNMLQALLARGGWEEITPVDASSRVWHRPDGPQN----------VFMWQITQGFLRADWLDKAWLTAHPSQRIQE------MIFLSRHAAASGRPSLTIHPIGNPGQPFAPQEEARGEHGGIPGRCVPPSPRMAPLFRQLHGAVQDAGLAGTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLGLSATEENGVSI----PAAEEPKLVIVGAGGGHYTPKMNDLLRHREDVLVGHILASYCFT----GSEEDWKRGIDEAIQATRRAYSLPSENEEEEDGGKEETRVCVYIDKKAFKSAPRQALVQYLESRGIQCAFKEND 360
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: D-tyrosyl-tRNA(Tyr) (deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6IAL8_9EURY) HSP 1 Score: 219 bits (559), Expect = 1.490e-64 Identity = 135/333 (40.54%), Postives = 180/333 (54.05%), Query Frame = 2
Query: 299 TLLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA---GGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR-----------EGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTALLEHLGTLGV 1255
TLL+ S+ D A DALLARG W EP NGK + H ++ LW R+L D D R++ A+ + ++V+FLS+H A SG P+L +H IGVP + E GG G+ PS R AG R + AA + L F+ T+E THHGP L TP MF+EIGSSE HW R DAAE WA+V+ + LGLDG +G +W L R + V IGGGHYAP+ D+ R++ + GH LASYAL+ + E EG W+ ++ V STRAAFP G V A +D+K+F+ +R + L L V
Sbjct: 19 TLLIVSEPDIASTIQGDALLARGGWSSCEP------VENGKVWVHDNAEVYLWWFGHRVLMEDHLDTRFSRAAG-------QVVNEVIFLSRHYAASGRPSLTLHVIGVPGETPKGEIAEFGGIKGQVVLPSTRFAGWYRLMCDAAHQHQLVPEFELTIETTHHGPCLTTPTMFIEIGSSESHWNRIDAAEAWADVIEKGLGLDGG-SGVGDWNSLSLEERKKAKVMVGIGGGHYAPRHTDVLRKTNCWAGHQLASYALEMCKPEDNEWEPDEGELPEGAWKHSIRVCVESTRAAFPD------GMVMAHLDRKSFKGWQRRVIKRWLKELNV 331
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: D-tyrosyl-tRNA(Tyr) (deacylase n=1 Tax=uncultured marine group II/III euryarchaeote KM3_44_G05 TaxID=1456448 RepID=A0A075H6X3_9EURY) HSP 1 Score: 219 bits (557), Expect = 2.480e-64 Identity = 127/324 (39.20%), Postives = 173/324 (53.40%), Query Frame = 2
Query: 299 TLLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR-----------EGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTAL 1228
TLL+ S+ D A DALLARG W ET+ GKA+ H+ +P LW ++L D D R+ + ++ G +V+FLS+H A SG P+L +H IGVP S E GG G P+PR A R + A GL F+ T+E THHGP L P MF+EIGSSE HW R DAAE WA+V+T LGL+G P NW +L ++ + IGGGHYAP+ D+ R++ + GH +A YAL+ + E G W ++ V STR AFP +G V A +D+K+F+ +R A+
Sbjct: 6 TLLIVSEPDIASTIQGDALLARGGWEETQT------IEGGKAWSHETAPVHLWWFPDKVLWQDRLDERYENGANAGVDGAAVKVGEVIFLSRHFAASGRPSLTLHVIGVPGESPVGEEAEFGGIKGEVVLPNPRFASWFRMMSEAGERHGLIPEFEMTIETTHHGPCLSVPTMFIEIGSSESHWDRRDAAEAWADVITDGLGLEGKPKPG-NWSELTAHEKSVAKVMIGIGGGHYAPRHTDVLRKTDCWAGHQIAGYALEMEKPEDPEWDPITGELPAGQWNHSIRVCVESTRQAFP------SGQVIAHLDRKSFKGWQRQAI 316
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: D-tyrosyl-tRNA(Tyr) (deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6HJE8_9EURY) HSP 1 Score: 218 bits (554), Expect = 6.360e-64 Identity = 128/331 (38.67%), Postives = 177/331 (53.47%), Query Frame = 2
Query: 302 LLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA--GGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREGGE-----------GTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTALLEHLGTLGV 1255
L++ S D A +ALL G W + G+E +G H S +W ++ LL D D RW SA+ +V+F S+H A SG P+L VHP+G+P+ E GGKP CPPP+PRLA RE+ + L F TLEVTHHGPWLETP++F+EIGS+ EHW R DAA++ A ++ + LGLDG G W +P A V IGGGHYAP G LA G ++GHM+ ++L + E G WR+A+ A+ STR AFP G + A +D+K+F+ +R ++ HL +G+
Sbjct: 17 LIIVSIPDIASLIQGEALLDLGDWQD---GMEVEGCST-----HSFSDARIWWLDSGLLWEDHLDSRWTSATG-------EKVCEVIFPSRHSAASGQPSLTVHPVGIPHIGEEDEIPFGGKPASCPPPNPRLASWYREIRKCGSSSELSDEFSFTLEVTHHGPWLETPSLFIEIGSTPEHWPRRDAAKILAEIIWQGLGLDGGD-GIGTWDQHNPCKVA-----VGIGGGHYAPFIGRLAAHEGIWLGHMVGGHSLPMDKPDDESWDPLTGELPAGNWRQAINSAIESTRLAFP------KGEIWAYMDRKSFKGWQRQSIKRHLQDIGI 320
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Match: D-tyrosyl-tRNA(Tyr) (deacylase n=4 Tax=root TaxID=1 RepID=A0A7J4GFD1_9ARCH) HSP 1 Score: 211 bits (536), Expect = 1.680e-61 Identity = 135/331 (40.79%), Postives = 183/331 (55.29%), Query Frame = 2
Query: 299 TLLVGSKQDAAGRAMADALLARGSWLETEPGVEPDGTRNGKAYRHKHS--PTSLWLVEGRLLDLDDADRRWASASSGGGTDEQHLPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKE---AGGKPGRCPPPSPRLAGCLRELGHAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDVNWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR--EGG--EGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERTALLEHLGTLGVEHR 1264
TLL+ S+ D A + A+LA G W E G G + H HS P L L++G ++ D+ D ++ SS D + +V+ LS+H AKSG+PAL VH IGVP E AGG+ G PPSPR EL +A +GL FD TLE THHGP+L P +++EIGS+EE W R DA+++WA V++ +LGLDGS G W E + +GGGHYAP+ + + G ++ H+LA+YAL+F E G G WR +V E VR TR AFPG G V A +D+K+F+ +R AL+ L L V R
Sbjct: 3 TLLLSSRADDASMNLYGAVLALGGWSE--------GEEFGHGFVHFHSSQPVHLLLIDGLHINADEID---SAHSSAVDIDVE----EVLVLSRHAAKSGIPALTVHAIGVPGEVPHGEVGYAGGRKGSAVPPSPRFTAIFLELQRSASLSGLAEEFDITLETTHHGPFLTKPTLYIEIGSTEEEWSRRDASKLWAEVISTVLGLDGS-TGQGIWP-------GEGEVMIGLGGGHYAPRHTAVVNQGGFWMAHLLANYALEFDGPVEDGLPTGPWRHSVGEVVRKTREAFPG------GVVFAHLDRKSFKGWQRRALISELDELAVPVR 304 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9459.17493.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9459.17493.1 >prot_E_fasciculatus_S2_contig9459.17493.1 ID=prot_E_fasciculatus_S2_contig9459.17493.1|Name=mRNA_E_fasciculatus_S2_contig9459.17493.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=398bp MTVAFRKASLFALLRLPCFAVWSNPRGKLLHQALRSRLTTAAAVTCSASPback to top mRNA from alignment at E_fasciculatus_S2_contig9459:3440..5917- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9459.17493.1 ID=mRNA_E_fasciculatus_S2_contig9459.17493.1|Name=mRNA_E_fasciculatus_S2_contig9459.17493.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2478bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9459:3440..5917- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9459:3440..5917- >mRNA_E_fasciculatus_S2_contig9459.17493.1 ID=mRNA_E_fasciculatus_S2_contig9459.17493.1|Name=mRNA_E_fasciculatus_S2_contig9459.17493.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1194bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9459:3440..5917- (Ectocarpus fasciculatus EfasUO2)back to top |