mRNA_E_fasciculatus_S2_contig9414.17461.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9414.17461.1
Unique NamemRNA_E_fasciculatus_S2_contig9414.17461.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA4_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 7.020e-101
Identity = 202/269 (75.09%), Postives = 218/269 (81.04%), Query Frame = 1
Query:    1 MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVK-----------------------ITDLAADAVECCSLARRLALRLTDGLAAGTISTTEKNSGGGRGWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIVVGSSSRVTKAPRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADERRQXXXXXXXXXXXXXXXXXXXXQSDNKKL 738
            MQ+LS+AVPV+GGLASFAAAALKA D RMQTRRVVK                       ITDLAADAVE CSLARRLALR+T+GLAAGTISTT+ NS GGRGWN+ +GALPDG SEEAVMEWFTEEVAN EAN T+SRGTP EQA RRLGKQHLKKLL+AVG+G L  TNTTEEKVE+LLE+I  GS SRVTK PRAEDKS V  PA  APSHDG L R+ E FAALKAK+EALELADERRQXXXXXXXXXXXXXXXXXXX QSDNK+L
Sbjct:  147 MQLLSHAVPVVGGLASFAAAALKARDHRMQTRRVVKHLQPSTYVHSRPTGLNQLFDDWQITDLAADAVERCSLARRLALRMTEGLAAGTISTTD-NSVGGRGWNLDLGALPDGTSEEAVMEWFTEEVANHEANTTASRGTPAEQAGRRLGKQHLKKLLMAVGQGRLLGTNTTEEKVEKLLEVIAGGSGSRVTKPPRAEDKSLVEYPAVPAPSHDGDLDRDAE-FAALKAKLEALELADERRQXXXXXXXXXXXXXXXXXXXLQSDNKQL 413          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH6_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 2.790e-59
Identity = 158/267 (59.18%), Postives = 175/267 (65.54%), Query Frame = 1
Query:  103 VKITDLAADAVECCSLARRLALRLTDGLAAGTISTTEKNSGGGRGWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEEQAARR-LG-----------------KQHLKKLLVAVGRGCLQCTNTTEEKV----------EELLEIIVVGS-------SSRVTKA-------------PRA---EDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADERRQXXXXXXXXXXXXXXXXXXXXQSDNKKLLGEV 750
            V ITDLAAD VECCSLARRLAL +TDGLAAGT STTE NS GGRGWN+ IG +PDG SEEA+MEWFTEEVAN EAN T+SRGTP EQ  R+ +G                 +QHLKKLL+AVG+  LQ TNTTEE              L  + ++ S       S R T+              PR     DKS V  PA  APSHDGGL R+ E FA LKAK+EALELADERRQXXXXXXXXXXXXXXXXXXX QSDNK+LL EV
Sbjct:  101 VAITDLAADVVECCSLARRLALPMTDGLAAGTTSTTE-NSVGGRGWNLGIGTMPDGTSEEALMEWFTEEVANHEANTTASRGTPAEQVGRKEIGASAFRGTQSCTSWEAAREQHLKKLLMAVGQDRLQGTNTTEEAFWPRDPGSDFDPGLQRLCLLPSETAPSRLSGRATQVQTLIQACNDCVSYPRRLHPPDKSLVEYPAVPAPSHDGGLDRDAE-FATLKAKLEALELADERRQXXXXXXXXXXXXXXXXXXXLQSDNKQLLAEV 365          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Leucine (rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A7_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.410e-51
Identity = 112/214 (52.34%), Postives = 144/214 (67.29%), Query Frame = 1
Query:   43 ASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTISTTEKNSGG--------GRG-------WNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIVVGSSSRVTKAPRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALEL 639
            A FAA ALKAGD  +QTRRV+K+TDLA DAVECCS+A+ L LRLTD L+  TI+T+    GG        G G       W+ S G LPD AS+E  MEWF EE A+   NNT  + TPEE+  RRLGK+H++ +L AV RGCLQ T+  EEKVE+LL+++V  + ++      A+++SF   PAA APSHDGGL    E FAA++AK+EALE+
Sbjct:  386 AGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSVAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQSNGGLPDCASDEDFMEWFAEEAASCVPNNTG-KSTPEEKTGRRLGKRHIRMILAAVERGCLQGTHAIEEKVEQLLKVVVPEAGAKPVSNSNAQERSFEQHPAAPAPSHDGGLDLHAE-FAAMQAKLEALEI 597          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Leucine (rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 3.900e-45
Identity = 114/242 (47.11%), Postives = 150/242 (61.98%), Query Frame = 1
Query:    1 MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTISTT----EKNSG---------GGRGWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEE-QAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIV------VGSSSRVTK------APRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADE 648
            ++ LS+AVPV+ GLA  AAAALKAGDR +QTRRV KI D+A D+ +CC LAR LAL+L+DG   GT+ TT    E+ S          GG GW+  IGA PD A+EEAVM+WF EEVA+ E NN  +R T    QA R+LGK+HL+ LL AVGR CL+ TNT +EKV+ L+ II+      VGS+S VT+      A  A+  S     AA+ P+   G  +     AAL  ++ ++ +  E
Sbjct:  536 LEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRMRTE 777          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Leucine (Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 2.810e-44
Identity = 113/242 (46.69%), Postives = 149/242 (61.57%), Query Frame = 1
Query:    1 MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTISTTEK--------NSG-----GGRGWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGT-PEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIV------VGSSSRVTK------APRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADE 648
            ++ LS+AVPV+ GLA  AAAALKAGDR +QTRRV KI D+A D+ +CC LAR LAL+L+DG   GT+ TT+          +G     GG GW+  IGA PD A+EEAVM+WF EEVA+ E NN  +R T P  QA R+LG +HL+ LL AVGR CL+ TNT +EKV+ L+ II+      VGS+S  T+      A  A+  S     AA+ P+   G  +     AAL  +M ++ +  E
Sbjct:  748 LEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRERLNHDASSAQPASRQSHAAATRPAVPDGAPKSDIDVAALMERMASMRIRTE 989          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Putative (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.710e-41
Identity = 110/242 (45.45%), Postives = 145/242 (59.92%), Query Frame = 1
Query:    1 MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTIST--------TEKNSGGGR-----GWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEE-QAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIV------VGSSSRVTK------APRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADE 648
            ++ LS+AVPV+ GLA  AAAALKAGDR +QTRRV KI D+A D+ +CC LAR LAL+L+DG   GT+ T        T   +G G      GW+  IGA PD A+EEAVM+WF EEVA+ E N   +R T    QA R+LG +HL+ LL AVGR CL+ TNT +EKV+ L+ II+      VGS+S  T+      A  A+  S     AA+ P+   G  +     AAL  +M ++ +  E
Sbjct:  563 LEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHDASSAQPASRQSHAAATRPAAPDGAAKNDLDVAALMERMASMRIRTE 804          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 3.440e-37
Identity = 89/181 (49.17%), Postives = 113/181 (62.43%), Query Frame = 1
Query:    1 MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTISTTEKNSG----GGRGWNVSIGALPDGASEEAVMEWFTEEVANREA-NNTSSRGTPEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIVVGSSSRVTKAPRAED 528
            +++LS AVP++GGL   A+AALK GDR +QTRRVVKI D+A DAVECCSLARRLA                        GG GW+    ALPDGA +  VMEWF +EVAN E  ++ ++R TPEEQA RRLGK+HL+ LL+AVG G L+   + EEKVE L+  ++          P+A D
Sbjct:  849 LKLLSAAVPMVGGLGGIASAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXGGGGWSQGEYALPDGARDRDVMEWFADEVANLEPQDHHATRTTPEEQAGRRLGKKHLQTLLLAVGNGRLEGAKSIEEKVELLVRTVLPEDEGNAVSTPQAPD 1029          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 4.890e-36
Identity = 93/226 (41.15%), Postives = 132/226 (58.41%), Query Frame = 1
Query:    1 MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTISTTEKNS-------GGGRGWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIVVGSSSRVTKAPRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADERRQ 657
            ++++S AVP++GGL   A  AL+AGD  +QTRR+VKIT +A D VECCSLARRLAL+LTDGL     +T + N+        GG G       +P   SEE V ++  EEV   E N+            +RLGK+HL+KLL A+  GCL  +N T +K++ LL  I+  +  +    P    +  V SP A A +HD GL    E FAA++A++ AL+ A +++Q
Sbjct:  291 LKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDMSEEDVFKYLLEEVTAYERND---------HGGKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAE-FAAIQAELAALKSAKDKQQ 506          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 6.620e-36
Identity = 93/226 (41.15%), Postives = 133/226 (58.85%), Query Frame = 1
Query:    1 MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTISTTEKNS-------GGGRGWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIVVGSSSRVTKAPRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADERRQ 657
            ++++S+AVP++GGL   A  AL+AGD  +QTRR+VKIT +A D VECCSLARRLAL+LTDGL     +T + N+        GG G       +P   SEE V ++  EEV   E N+            +RLGK+HL+KLL A+  GCL  +N T +K++ LL  I+  +  +    P    +  V SP A A +HD GL    E FAA++A++ AL+ A +++Q
Sbjct:  486 LKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDMSEEDVFKYLLEEVTADERND---------HGGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAE-FAAIQAELAALKSAKDKQQ 701          
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.380e-35
Identity = 98/229 (42.79%), Postives = 134/229 (58.52%), Query Frame = 1
Query:    7 MLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSLARRLALRLTDGLAAGTIS------------TTEKNSGGGRGWNVSIGALPDGASEEAVMEWFTEEVANREANNTSSRGTPEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTEEKVEELLEIIVVGSSSRVTKAPRAEDKSFVGSPAASAPSHDGGLGREGELFAALKAKMEALELADERRQ 657
            +LS+AVPV+ GLA  A  AL+ GD  +QTRR+VKIT +AAD +ECCSLARRLAL+LTDGL   T              T   N G G G +  I   PD   E+ V E+  EEVA  E ++            +RLGK+HL+KLL A+ RGCL  ++  ++K+E LL  I+ G+  R ++      K  V SP A AP+HDG L    ++ AAL+A +E L LA ++++
Sbjct:  565 LLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADIS--PDDMIEDDVFEYLLEEVARYERSD---------HGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTPKKVIVRSPPALAPTHDGRLPSMADI-AALQAAVEVLTLAKDKQR 781          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9414.17461.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
Uncharacterized7.020e-10175.09protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.790e-5959.18protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Leucine1.410e-5152.34rich repeat protein n=1 Tax=Ectocarpus siliculosus... [more]
Leucine3.900e-4547.11rich repeat protein n=1 Tax=Ectocarpus siliculosus... [more]
Leucine2.810e-4446.69Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus... [more]
Putative1.710e-4145.45Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
Hypothetical3.440e-3749.17leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Hypothetical4.890e-3641.15leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Hypothetical6.620e-3641.15leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Uncharacterized1.380e-3542.79protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9414contigE_fasciculatus_S2_contig9414:3459..5202 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score193.0
Seed ortholog evalue1.7e-46
Seed eggNOG ortholog2880.D7G8A7
Model size750
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG OGs2E19U@1,2S8MQ@2759
Cds size750
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842590.9842505-CDS-E_fasciculatus_S2_contig9414:3458..35661696842590.9842505-CDS-E_fasciculatus_S2_contig9414:3458..3566Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9414 3459..3566 +
1696842590.9950986-CDS-E_fasciculatus_S2_contig9414:3702..38201696842590.9950986-CDS-E_fasciculatus_S2_contig9414:3702..3820Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9414 3703..3820 +
1696842591.0045614-CDS-E_fasciculatus_S2_contig9414:4279..44161696842591.0045614-CDS-E_fasciculatus_S2_contig9414:4279..4416Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9414 4280..4416 +
1696842591.0135884-CDS-E_fasciculatus_S2_contig9414:4551..46441696842591.0135884-CDS-E_fasciculatus_S2_contig9414:4551..4644Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9414 4552..4644 +
1696842591.0225172-CDS-E_fasciculatus_S2_contig9414:4908..52021696842591.0225172-CDS-E_fasciculatus_S2_contig9414:4908..5202Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9414 4909..5202 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9414.17461.1prot_E_fasciculatus_S2_contig9414.17461.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9414 3459..5202 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9414.17461.1

>prot_E_fasciculatus_S2_contig9414.17461.1 ID=prot_E_fasciculatus_S2_contig9414.17461.1|Name=mRNA_E_fasciculatus_S2_contig9414.17461.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=250bp
MQMLSNAVPVLGGLASFAAAALKAGDRRMQTRRVVKITDLAADAVECCSL
ARRLALRLTDGLAAGTISTTEKNSGGGRGWNVSIGALPDGASEEAVMEWF
TEEVANREANNTSSRGTPEEQAARRLGKQHLKKLLVAVGRGCLQCTNTTE
EKVEELLEIIVVGSSSRVTKAPRAEDKSFVGSPAASAPSHDGGLGREGEL
FAALKAKMEALELADERRQAKLEALELADERRQAEFEVLQSDNKKLLGEV
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mRNA from alignment at E_fasciculatus_S2_contig9414:3459..5202+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9414.17461.1 ID=mRNA_E_fasciculatus_S2_contig9414.17461.1|Name=mRNA_E_fasciculatus_S2_contig9414.17461.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1744bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9414:3459..5202+ (Ectocarpus fasciculatus EfasUO2)
ATGCAAATGCTATCTAACGCGGTTCCCGTGCTCGGTGGGCTAGCGAGCTT CGCAGCCGCAGCTTTGAAGGCCGGTGACCGCCGGATGCAAACTCGACGAG TGGTCAAGGTGAGCAGATTTTCATGCGCGCGGGGTGTACGGTAGCTCGGC GTAGTTGCTGGATACTCTATGCGCCCTAGCATCCAGCTTTTGACTGCGTT CACAATCGGCCCACCAGCCTCAACTACTCTTTGATGATTGGCAGATCACC GACCTGGCAGCTGATGCGGTTGAGTGCTGTTCGCTGGCGAGGAGATTGGC CCTACGACTCACGGACGGTCTCGCCGCCGGCACAATCTCCACGACCGAGA AAAACTCGGGCGGTAAGAATGGTATTCGAACGTGCCATTGGATTAGGCAC GTCCGTTGGTGGGCGGCACCGTCGTACGCAAGATGGAACAGTGTAGAATC GAAAGTAATTCACACAAAAACTGTTGCGTTTGTGTTTCCCTAAGAGGTTT GGGCACGATACATGTTTTGTTGATCGTATGTTGCAGATTTTCTAGAGTGA AACCTGCGAGTTTCGTTCAGCCGAGGTGAACAATACGTTGCCAGGTGATT GTTTAGGTGGCATACCCGCAAACTTTGTTCCTGCACGCACGTAAGCAGAT CTGTAGCAGTCGCGCAGTTGGAGGAAGTTGGTCCCAATTTTAGTGTTTGT CGTCCAGGGTACACAAGGCCACTTGCGACATCTCGAGCCCACGGGAGAGC TAACATTGGCGCAACACCTGAACCATAGACGACCGCAGTCCACAAACCGG TTGCTGTGTTCCTTGTCTCAGGAGGACGTGGCTGGAATGTGAGCATTGGT GCGTTGCCAGACGGTGCGAGCGAGGAAGCCGTCATGGAATGGTTTACGGA AGAGGTTGCGAACCGCGAAGCCAACAACACCTCAAGCAGAGGGACCCCCG AAGAACAGGTAGGAGGGGCGGAACTCGGGCGCTTCGGCCTTCAGTGGCGC CCGATCTTGAAGAAGTCCGTCCACTAACTAGGTTAGCGTGGAATATCGGC ACCATTATTCGTACCGCACTTTTGTATGGTCCGGTCTCGACAGGCTGCGA GGCGGCTCGGAAAACAGCACCTCAAGAAGCTACTGGTGGCAGTGGGACGG GGCTGCCTCCAATGCACAAACACCACGGAAGAAAAGGTGAGAGGTTGTTT TGTGCAGAAACCCACCGGATGCACTTGTGTTGCGTCTCGCCGTACGTTTT CCCAGCAGCCGCAGGTTTTTGGCTGCGCGATCGAGGTTCAGACTTTGATC CGGGCTGCGTTTCTGACTCTCTCGCAGACTGCGCCCTCAGGGTGAAAATG GGTAGCATGCGAGTGACACTTTCTTCCTTGGACGGGGATTTTCATTGATT GCCCTTTCGTTTGCTCAAGCACTTGTTTGGACGCACGGTGATCTAAATAG GTTGAAGAGCTGCTGGAGATCATCGTCGTCGGGTCCAGCAGTAGGGTCAC TAAAGCCCCCCGTGCGGAAGACAAATCGTTTGTGGGGTCTCCTGCGGCAT CAGCTCCATCTCACGACGGCGGCTTGGGTCGGGAAGGGGAGTTGTTCGCC GCTCTCAAGGCAAAAATGGAAGCACTAGAGCTCGCTGATGAGAGGCGGCA AGCAAAATTGGAAGCGCTAGAGCTCGCCGACGAGAGGCGGCAAGCAGAAT TCGAGGTATTACAGTCTGACAACAAGAAGCTTCTGGGCGAGGTA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9414:3459..5202+

>mRNA_E_fasciculatus_S2_contig9414.17461.1 ID=mRNA_E_fasciculatus_S2_contig9414.17461.1|Name=mRNA_E_fasciculatus_S2_contig9414.17461.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9414:3459..5202+ (Ectocarpus fasciculatus EfasUO2)
ATGCAAATGCTATCTAACGCGGTTCCCGTGCTCGGTGGGCTAGCGAGCTT
CGCAGCCGCAGCTTTGAAGGCCGGTGACCGCCGGATGCAAACTCGACGAG
TGGTCAAGATCACCGACCTGGCAGCTGATGCGGTTGAGTGCTGTTCGCTG
GCGAGGAGATTGGCCCTACGACTCACGGACGGTCTCGCCGCCGGCACAAT
CTCCACGACCGAGAAAAACTCGGGCGGAGGACGTGGCTGGAATGTGAGCA
TTGGTGCGTTGCCAGACGGTGCGAGCGAGGAAGCCGTCATGGAATGGTTT
ACGGAAGAGGTTGCGAACCGCGAAGCCAACAACACCTCAAGCAGAGGGAC
CCCCGAAGAACAGGCTGCGAGGCGGCTCGGAAAACAGCACCTCAAGAAGC
TACTGGTGGCAGTGGGACGGGGCTGCCTCCAATGCACAAACACCACGGAA
GAAAAGGTTGAAGAGCTGCTGGAGATCATCGTCGTCGGGTCCAGCAGTAG
GGTCACTAAAGCCCCCCGTGCGGAAGACAAATCGTTTGTGGGGTCTCCTG
CGGCATCAGCTCCATCTCACGACGGCGGCTTGGGTCGGGAAGGGGAGTTG
TTCGCCGCTCTCAAGGCAAAAATGGAAGCACTAGAGCTCGCTGATGAGAG
GCGGCAAGCAAAATTGGAAGCGCTAGAGCTCGCCGACGAGAGGCGGCAAG
CAGAATTCGAGGTATTACAGTCTGACAACAAGAAGCTTCTGGGCGAGGTA
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