mRNA_E_fasciculatus_S2_contig9410.17458.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9410.17458.1
Unique NamemRNA_E_fasciculatus_S2_contig9410.17458.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP64_ECTSI)

HSP 1 Score: 1280 bits (3311), Expect = 0.000e+0
Identity = 671/738 (90.92%), Postives = 683/738 (92.55%), Query Frame = 1
Query:    1 MMTFTILLRTGCSRVVNARFVLAIAAVILAVADAFHVRASIPLRTIATPRKLPWARMASSGDITGLMMSTSIASTXXXXXTAAATPEAALDPIIQELRARIVEAPEPLEGNRESQRHADKVLSTTFEVDCDGNLLGGEGQELRLATALALDTFVVVRVRPKPARACLRGLGRVAEQLLGESRTVEEKVTAFGRIRAEGQFVSGYAGGGDYGTDQFLETRGIGGDEIVPRVDGDAAADLIEGRRALTAISGGILQAVLRQSLPEVDPAAFLGLIDPGEGRQGVGGSSPKMSASPLRICRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGIAGAAIRGSMLPPAVAARLERRSEEAKQTRREIRRAAGSSSGE-GDEGGELNMTDLWTALQFRGGATPESNGGAGGGGDGWSGEISDNVSSPP-LAQAKTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASPGQCSAIIDQGMESLEQSTTWGGAGAQTESDALRSSATTWLADDCLAPLLGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSVELPVEEDADSMRPDERSAHAGLAVEGGDKWIATKWIHPLPYPNGRADDEETTEDLSPYAEWAPYPPIGVAE 2208
            MMTF +LLRTGCSRVVNARFVLAIAAVILAVADAFHVRASIPLR IA PRKLPWAR ASSGD             XXXXX    TPEAAL+PIIQELRARIVEAPEPLEGNRESQRHAD+V+STTFEVDCDGNLLGGEGQELRL  AL+LDTFVVVRVRPKPARACLR LGRVAEQLLGESRTVEEKV AFG IRAEGQFVSGYAGGGDYG+ QFLETRGIGGDEIVP VDGDAAA LIEGRRALTAISGGILQAVLRQSLPE+DPAAFLGL+DPGEGRQGVGGSSP MSASPLRICRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGIAGAAIRGSMLPPAVAARLERRSEEAKQTRREI         E GDE GELNMTDLW ALQFRGGATPES+GG    GDGW GEISD+VSSPP LAQ KTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASPGQCSAIIDQGMESLE+STTWGGAGAQTESDALR SATTWLADDCLAPLLG LTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFN LVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSVELPVEEDADSMRPDERSAH+GLAVEGGDKWIATKWIHPLPYPNGR DDEE TE LSPYAEWAPYPPIGVAE
Sbjct:    1 MMTFALLLRTGCSRVVNARFVLAIAAVILAVADAFHVRASIPLRNIAIPRKLPWARTASSGDTXXXXXXXXXXXXXXXXXXV--TPEAALNPIIQELRARIVEAPEPLEGNRESQRHADRVISTTFEVDCDGNLLGGEGQELRLTRALSLDTFVVVRVRPKPARACLRRLGRVAEQLLGESRTVEEKVAAFGPIRAEGQFVSGYAGGGDYGSGQFLETRGIGGDEIVPHVDGDAAAGLIEGRRALTAISGGILQAVLRQSLPEIDPAAFLGLVDPGEGRQGVGGSSPNMSASPLRICRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGIAGAAIRGSMLPPAVAARLERRSEEAKQTRREIXXXXXXXXXEEGDEAGELNMTDLWAALQFRGGATPESSGG----GDGWGGEISDSVSSPPPLAQTKTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASPGQCSAIIDQGMESLEESTTWGGAGAQTESDALRRSATTWLADDCLAPLLGRLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNRLVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSVELPVEEDADSMRPDERSAHSGLAVEGGDKWIATKWIHPLPYPNGRVDDEEATEGLSPYAEWAPYPPIGVAE 732          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM1_9PHAE)

HSP 1 Score: 1079 bits (2790), Expect = 0.000e+0
Identity = 546/584 (93.49%), Postives = 560/584 (95.89%), Query Frame = 1
Query:  463 VVRVRPKPARACLRGLGRVAEQLLGESRTVEEKVTAFGRIRAEGQFVSGYAGGGDYGTDQFLETRGIGGDEIVPRVDGDAAADLIEGRRALTAISGGILQAVLRQSLPEVDPAAFLGLIDPGEGRQGVGGSSPKMSASPLRICRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGIAGAAIRGSMLPPAVAARLERRSEEAKQTRREIRRAAGSSSGE-GDEGGELNMTDLWTALQFRGGATPESNGGAGGGGDGWSGEISDNVSSPP-LAQAKTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASPGQCSAIIDQGMESLEQSTTWGGAGAQTESDALRSSATTWLADDCLAPLLGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSVELPVEEDADSMRPDERSAHAGLAVEGGDKWIATKWIHPLPYPNGRADDEETTEDLSPYAEWAPYPPIGVAE 2208
            VVRVRPKPARACLR LGRVAEQLLGESRTVEEKV AFG IRAEGQFVSGYAGGGDYG+ QFLETRGIGGDEIVP VD DA A LIEGRRALTAISGGILQAVLRQSLPE+DPA+FLGL+DPGEGRQGVGGSSPKMSASPLR+CRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRG+AGAAIRGSMLPPAVAARLERRSEEAKQTRREIRRAAG SS E GDEGGELNMTDLW ALQFRGGATP    G+ GGGDGWSGEISD+VSSPP LAQAKTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASP QCSAIIDQGMESLE+STTWGGAGAQTESD LR SATTWLADDCLAPLLG LTERVSGMSG+PSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSV+LPVEEDADSMRPDERSAH+GLAV GGDKWIATKWIHPLPYPNGR DDEE+TEDLSPYAEWAPYPPIG+AE
Sbjct:    4 VVRVRPKPARACLRRLGRVAEQLLGESRTVEEKVAAFGPIRAEGQFVSGYAGGGDYGSGQFLETRGIGGDEIVPHVDDDAVAGLIEGRRALTAISGGILQAVLRQSLPEIDPASFLGLVDPGEGRQGVGGSSPKMSASPLRVCRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGVAGAAIRGSMLPPAVAARLERRSEEAKQTRREIRRAAGGSSWEEGDEGGELNMTDLWAALQFRGGATP----GSSGGGDGWSGEISDSVSSPPPLAQAKTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASPDQCSAIIDQGMESLEESTTWGGAGAQTESDVLRRSATTWLADDCLAPLLGRLTERVSGMSGVPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSVQLPVEEDADSMRPDERSAHSGLAVTGGDKWIATKWIHPLPYPNGRVDDEESTEDLSPYAEWAPYPPIGIAE 583          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN53_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 5.500e-71
Identity = 133/154 (86.36%), Postives = 138/154 (89.61%), Query Frame = 1
Query:    1 MMTFTILLRTGCSRVVNARFVLAIAAVILAVADAFHVRASIPLRTIATPRKLPWARMASSGDITGLMMSTSIASTXXXXXTAAATPEAALDPIIQELRARIVEAPEPLEGNRESQRHADKVLSTTFEVDCDGNLLGGEGQELRLATALALDTFV 462
            MMTFTILLR  CSRVVNARFVLAIAAVILAVADAFHVR SIPLRTIA PR+LPWAR ASSGD T LMMST+ AST     T A TPEAALDPIIQELRARIVEAPEPLEGNRESQRHAD+V+STTFEVDCDGNLLGGEGQELRLA ALAL+TFV
Sbjct:    1 MMTFTILLRADCSRVVNARFVLAIAAVILAVADAFHVRVSIPLRTIAIPRRLPWARTASSGDTTVLMMSTATASTTTRT-TPAVTPEAALDPIIQELRARIVEAPEPLEGNRESQRHADRVISTTFEVDCDGNLLGGEGQELRLARALALETFV 153          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6W7_HETAK)

HSP 1 Score: 160 bits (406), Expect = 7.150e-41
Identity = 88/226 (38.94%), Postives = 136/226 (60.18%), Query Frame = 1
Query: 1447 VSSPPLAQAKTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASPGQCSAIIDQGMES-LEQSTTWGGAGAQTESDALRSSATTWLADDCLAPLLGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSVELPVEEDADSMRPDERSAHAGLAVEGGDKWIATKWIHPLPYP 2121
            +S+PP   +    +I + FE +    + +LS++PLL+ +  F SP  C  I+ +  E  L++ST         +  + R+S+T WL D   A  +  + ++V  MSG+P +  E  QV RY+ +  + LHTDH+++FN L  GGRL T ++YLNDDFTGG+TDFP + V+V+P  G A+++++V+LP E D   ++ +    HAGL V  G KW   KWIHP+P P
Sbjct:   48 LSAPPTKLS----EIEQRFERFGTR-IEILSMNPLLLLIHDFLSPELCDCIVAEACEKGLDKSTILN----DKDEYSGRTSSTVWLQDKHEASEVNKMAKKVQKMSGIPISHQENLQVIRYQLNQQYTLHTDHMDEFNELEVGGRLATCLMYLNDDFTGGETDFPELKVSVSPKKGSALFWYNVKLPAE-DPWKLQTNFDLLHAGLPVTHGIKWACNKWIHPVPIP 263          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH17_AURAN)

HSP 1 Score: 172 bits (437), Expect = 7.860e-41
Identity = 156/494 (31.58%), Postives = 209/494 (42.31%), Query Frame = 1
Query:  619 GGDYGTDQFLETRGIGGDEIV--PRVDGDAAADLIEGRRALTAISGGILQAVLRQSLPEVDPAAFLGLIDPGEGRQGVGGSSPKMSASPLRICRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGIAGAAIRGSMLPPAVAARLERRSEEAKQTRREIRRAAGSSSGEGDEGGELNMTDLWTALQFRGGATPESNGGAGGGGDGWSGEISDNVSSPPLAQAKTTDQIRECFEPYARDGVA-VLSVDPLLVRLRGFASPGQCSAIIDQGMESLEQSTTWGGAGAQTESDALRSSATTWLADDCLAPLLGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVHVAVAPFAGDAIYFHSVELPV-EEDADSMRPDERSAHAGLAVEGGDKWI 2088
            GGD G  +F E R  GGD     P +  +A   L E RR L A+   + +A+L        P A   + D         G   ++S +  R+CRYA     V FG HTDT+F T++P +S PGLE+  PS   WVRPEA+      +DV+ + GE L++   G ++A VHRV+   G    RVSTPLL+RG    A+ G                                         +N  D W ALQ R    P+    A  G          +V          T    E F   A  G A VLS DPL+V L GFAS   C+A++                          +S T WL DD  AP  G L  R + ++ LP A  E+W+VA Y P           ++  +   GGR  TL LYL+D F GG T FP + + VAP  GDAI+      P+   D  ++     +    L VE G K +
Sbjct:  673 GGD-GPGRFAEGR-YGGDGRARPPGLAAEAGPALDESRRVLGALGALLARALL--------PDAEARVADD----VSADGGRREVSTTAHRLCRYAPSSKAVVFGAHTDTSFFTLVPLSSPPGLEVFDPSLDAWVRPEAAEGAE-ATDVLCMPGEFLELASAGAFRAVVHRVL---GGPTKRVSTPLLVRGDRRFALGG-----------------------------------------VNAHDCWRALQER---EPDRAAEAIRGAPA-------HVDGASYVAPHRTRAEAETFYSLALGGAAEVLSADPLVVLLPGFASDADCAAVL------------------------AAASRTAWL-DDAAAP--GDLALRAAAVAELPPAHAERWRVAAYGPG----------DEPRADAAGGRFATLALYLDDGFAGGATAFPDLGLTVAPKRGDAIFVRDARTPLLRADRFAVAAHAAARREELPVEAGVKHV 1060          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Hypothetical (protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KU42_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.710e-33
Identity = 85/259 (32.82%), Postives = 133/259 (51.35%), Query Frame = 1
Query: 1435 ISDNVSSPPLAQAKTTDQIRECFEPYARDGVAVLSVDPLLVRLRGFASPGQCSAIID---------QGMESLEQSTTWGGAGAQTESDALRSSATTWLADDCLAPLLGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDD---------------FTGGQTDFPFVHVAVAPFAGDAIYF-HSVELPVEEDADS---MRPDERSAHAGLAVEGGDKWIATKWIHPLPYPNG 2127
            + ++VS    A     D +    + + +  + V+S +P LV + GF S   C  I++            E+++        GA+ +    R+S+T WL  D     L   + RVS +SGLP++  E  QV RY+P   F++HTDH++ FN + CGGRL T ++YLND                FTGG+T F     AV+P  G A+++ +++E P  +  D    +  D +  HAGL V  G+KW+  KW+HPLP+P+G
Sbjct:  111 VFNDVSHHDAASNALNDNVAPTIDQHLQR-IEVISEEPPLVIVHGFLSTEHCDDIMNAVIGPEEAYDNSENVKNQLKRSTMGAKQDKSQQRTSSTAWLHPDHCPKPLDEFSARVSNLSGLPTSNFENMQVVRYQPGQEFQIHTDHLDSFNDMDCGGRLATCLMYLNDSEDNVPEESLSNNDETFTGGETFFHEFDRAVSPRKGSALFWWNTMERPGSKGYDKNMFLNVDLKLRHAGLPVLSGEKWVCNKWMHPLPFPHG 368          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVQ0_PHATC)

HSP 1 Score: 132 bits (332), Expect = 1.620e-30
Identity = 75/212 (35.38%), Postives = 115/212 (54.25%), Query Frame = 1
Query: 1531 VLSVDPLLVRLRGFASPGQCSAIIDQGM--ESLEQSTTWGGAGAQTESDALRSSATTWLADDCLAPLLGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVH------VAVAPFAGDAIYFHSVE----LPVEEDADS-MRPDERSAHAGLAVEGGDKWIATKWIHPLPYPNG 2127
            V+S +P LV +  F S   C  +ID     + + +STT    G++ E+  +R+S T WL D+ +      + E++S +SG P+  ME  QV RY     FKLHTD ++ +N +   GR+ T ++YL     GG+T FP VH      + +AP  G AI+F +       P  + AD  +  D R  HAG+ V+GG+KW+  +W+HP+ Y  G
Sbjct:   91 VVSSEPPLVLIHDFLSTSMCKNLIDTATSTDKMIRSTT----GSEQETSTIRTSTTVWLNDEQVPETSRIIAEKISSISGFPANHMENLQVVRYETGQSFKLHTDTIDAYNEMDKRGRVATCLIYLAAPTIGGETLFPDVHADKAIQIRIAPRQGSAIFFWNTHEKPGSPAYDGADMFLNTDLRMRHAGMPVDGGEKWVCNRWVHPVDYGVG 298          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KZI0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.030e-25
Identity = 80/229 (34.93%), Postives = 112/229 (48.91%), Query Frame = 1
Query: 1516 RDGVAVLSVDPLLVRLRGFASPGQCSAIIDQGME-SLEQSTTWGGAGAQTESDALRSSATTWLADDCLA---PL-LGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLN--------------DD--FTGGQTDFPFVHVAVAPFAGDAIYF-HSVELPVEEDADS---MRPDERSAHAGLAVEGGDKWIATKWIHPLPYPNG 2127
            ++ + V+S +P    +  F     C  II       L++S      GA  +++  R+S   WL ++      PL L     +VS ++GLP    E  QV RY     F LH DH+++FN L C GRL T +LYLN              DD  FTGG+T FP     V P  G AI++ ++VE P  E  D    +  D R  HAGL +  G+KWIA +W+HP+P   G
Sbjct:   75 KECIDVISAEPPFFLIHDFLDDDMCEEIIQTAERCGLKRSRV----GAHQKTEEKRTSEQVWLGENTHELEDPLPLRRFATKVSRLTGLPPNHQENLQVVRYEEGQRFDLHLDHLDEFNDLECRGRLATCLLYLNSSDYYNNFIDHNNDDDASFTGGETGFPEFGTNVVPKRGSAIFWWNTVERPGSEGYDCEMFLHGDVRMRHAGLPILSGEKWIANRWVHPIPVSLG 299          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM35_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.550e-25
Identity = 55/133 (41.35%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 1723 LLGSLTERVSGMSGLPSAFMEKWQVARYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDF-PFVHVAVAPFAGDAIYFHSVELPVEEDADSMRPDERSAHAGLAVEGGDKWIATKWIHPLPY 2118
            +L  +  ++S M+G P   +E  QV +Y+ D  +  H D + ++N L  GGRL + ++YLNDDF GG TDF    HV V P  G  +++++ ELP E + D M PD R+ HAGL V  G K+ A KW+H   Y
Sbjct:    7 VLQMIDSKISRMTGQPIENLESLQVIKYKKDEQYAYHLDTIPEYNDLPFGGRLASCLIYLNDDFEGGATDFLELEHVCVQPRRGGVLFWYNPELPYEIEGD-MVPDVRTTHAGLPVVSGTKYAANKWVHAKRY 138          
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4K1_HETAK)

HSP 1 Score: 108 bits (271), Expect = 5.900e-24
Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 1
Query:  916 VAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGIAGAAI 1203
            V FG HTDTTF+T+IPC++ PGLE+  P+   WVRPE +  CRPG D+++L GELLQV   G Y AAVHRVV   G T  RVS PLL+R    AA+
Sbjct:    6 VTFGAHTDTTFVTLIPCSNIPGLEVFSPALDGWVRPEPA--CRPGRDIIILPGELLQVLSAGHYPAAVHRVVSVGGGTA-RVSAPLLVRPNPSAAV 98          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9410.17458.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+090.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized0.000e+093.49protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.500e-7186.36protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical7.150e-4138.94protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized7.860e-4131.58protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical1.710e-3332.82protein n=2 Tax=Skeletonema marinoi TaxID=267567 R... [more]
Predicted1.620e-3035.38protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Hypothetical1.030e-2534.93protein n=1 Tax=Leptocylindrus danicus TaxID=16351... [more]
Hypothetical1.550e-2541.35protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical5.900e-2457.29protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9410contigE_fasciculatus_S2_contig9410:698..5592 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1289.6
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FP64
Model size2211
KEGG rclassRC00478
KEGG koko:K00472
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
Hectar predicted targeting categorychloroplast
Exons6
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
Ec32 ortholog descriptionProlyl 4-hydroxylase, alpha subunit
Ec32 orthologEc-08_000690.1
EC1.14.11.2
Cds size2211
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9410.17458.1prot_E_fasciculatus_S2_contig9410.17458.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9410 698..5592 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842590.6587367-CDS-E_fasciculatus_S2_contig9410:697..11591696842590.6587367-CDS-E_fasciculatus_S2_contig9410:697..1159Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9410 698..1159 +
1696842590.6990514-CDS-E_fasciculatus_S2_contig9410:1980..22441696842590.6990514-CDS-E_fasciculatus_S2_contig9410:1980..2244Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9410 1981..2244 +
1696842590.7222216-CDS-E_fasciculatus_S2_contig9410:2606..28051696842590.7222216-CDS-E_fasciculatus_S2_contig9410:2606..2805Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9410 2607..2805 +
1696842590.7408543-CDS-E_fasciculatus_S2_contig9410:3215..40841696842590.7408543-CDS-E_fasciculatus_S2_contig9410:3215..4084Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9410 3216..4084 +
1696842590.7533195-CDS-E_fasciculatus_S2_contig9410:4695..48991696842590.7533195-CDS-E_fasciculatus_S2_contig9410:4695..4899Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9410 4696..4899 +
1696842590.7638488-CDS-E_fasciculatus_S2_contig9410:5379..55921696842590.7638488-CDS-E_fasciculatus_S2_contig9410:5379..5592Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9410 5380..5592 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9410.17458.1

>prot_E_fasciculatus_S2_contig9410.17458.1 ID=prot_E_fasciculatus_S2_contig9410.17458.1|Name=mRNA_E_fasciculatus_S2_contig9410.17458.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=737bp
MMTFTILLRTGCSRVVNARFVLAIAAVILAVADAFHVRASIPLRTIATPR
KLPWARMASSGDITGLMMSTSIASTTTTTITAAATPEAALDPIIQELRAR
IVEAPEPLEGNRESQRHADKVLSTTFEVDCDGNLLGGEGQELRLATALAL
DTFVVVRVRPKPARACLRGLGRVAEQLLGESRTVEEKVTAFGRIRAEGQF
VSGYAGGGDYGTDQFLETRGIGGDEIVPRVDGDAAADLIEGRRALTAISG
GILQAVLRQSLPEVDPAAFLGLIDPGEGRQGVGGSSPKMSASPLRICRYA
GGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPG
SDVMLLAGELLQVFGRGRYQAAVHRVVRPAGSTEPRVSTPLLLRGIAGAA
IRGSMLPPAVAARLERRSEEAKQTRREIRRAAGSSSGEGDEGGELNMTDL
WTALQFRGGATPESNGGAGGGGDGWSGEISDNVSSPPLAQAKTTDQIREC
FEPYARDGVAVLSVDPLLVRLRGFASPGQCSAIIDQGMESLEQSTTWGGA
GAQTESDALRSSATTWLADDCLAPLLGSLTERVSGMSGLPSAFMEKWQVA
RYRPDGYFKLHTDHVEDFNSLVCGGRLGTLILYLNDDFTGGQTDFPFVHV
AVAPFAGDAIYFHSVELPVEEDADSMRPDERSAHAGLAVEGGDKWIATKW
IHPLPYPNGRADDEETTEDLSPYAEWAPYPPIGVAE*
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mRNA from alignment at E_fasciculatus_S2_contig9410:698..5592+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9410.17458.1 ID=mRNA_E_fasciculatus_S2_contig9410.17458.1|Name=mRNA_E_fasciculatus_S2_contig9410.17458.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4895bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9410:698..5592+ (Ectocarpus fasciculatus EfasUO2)
ATGATGACGTTCACCATACTGCTGCGCACCGGGTGCAGTCGTGTCGTGAA CGCCCGCTTCGTGCTAGCCATCGCGGCGGTGATCCTCGCCGTTGCGGATG CTTTCCATGTGCGTGCTTCGATCCCGCTCCGCACCATTGCGACCCCACGA AAACTGCCGTGGGCGCGGATGGCTTCAAGCGGCGACATTACCGGACTCAT GATGAGCACCTCTATAGCTAGTACCACCACGACTACCATTACCGCTGCTG CCACGCCTGAGGCCGCCTTGGACCCCATTATCCAAGAACTGCGAGCAAGG ATCGTGGAAGCACCGGAGCCCTTGGAGGGGAACAGAGAGTCCCAACGGCA TGCCGACAAGGTTCTCTCGACGACGTTCGAAGTTGACTGTGACGGGAACT TGCTGGGCGGCGAGGGGCAAGAGCTCCGACTTGCGACGGCCCTGGCTCTG GACACCTTTGTGGTGAGAGAGGCGGCAACAACAGCTGTAGCACCGGTTGG CTGATGCCAACGCGTGGTTCGACGGATGAGTTTGTCACACGGAGAAAAAA CGAAGTTCAACCCGGGGTCCGTTATGTACGTGTAGTCCGGAGAAAACCAT TGGTACATCAAGTGTATGACGTGTATGACACGGTGACCGCGGTGCATGGT GCAGCTTACGTCTGCCCTACGAATGCAGCGACCCAACACATGCCACGTCT ATGTAGCAACCCACCCTTGTGGTGCTGTACAGTAGCCCGGATGCAACGAT ACAACCACGTGTGCGTATGATGTATACGACGATTACCTTGTCGTATATAC AAGGGCAAAACAAATCAAACTGCTGTAGCGTTCATCGTACTGCTGTAGCC AAGAAAATATCTGCATTGCTATAATATAAGGAGTTCGACTATTCGGGAGC CAGCTGCTTGTCATGGATACGTATGCATAGCAACGCTGACTGAACATAGT GGCGATCCAAACCTATGTGCTCGTGCATGGTCCCTATGACGAGCGCGGCG AGGTTGAAAGCGATGCCCACGTTGGCGCAGCGCGGAGCGTGACCAAGGAT TGAGAGGGCATAAGAAAATGTTTCGTATCGTTTCGGAGGGAAACCGTTCG TTGCTGCTGTGGCAACTAACTTTCCCCCAATTATCTACCTTTCGAATGCG CATCAGGGGCTAAGAAGGGTCTGTGCTGCATGCTATACTGTTTGGAGCCC GCGATGTAGCCACGTTCCCCTAGACTCGTCCCGATATTCGATGAATTTTA AGGTTTCTGTTGCGTGTATCCCCTTCCCCTCAGGTCGTGCGAGTCAGGCC CAAACCTGCCAGGGCGTGTCTTCGGGGGCTGGGGAGAGTGGCGGAGCAGC TTCTGGGGGAGTCCCGCACGGTTGAAGAGAAAGTGACGGCTTTCGGCCGG ATCAGAGCCGAGGGACAGTTCGTTTCGGGGTATGCGGGAGGAGGAGACTA CGGTACTGATCAGTTTCTGGAGACAAGGGGCATCGGCGGAGACGAGATTG TCCCTCGCGTTGATGGCGATGCTGCAGCCGATTTGATCGAGGGCAGGGTG AGTACGCTTCGACGGCAGCGCTTGGAAGGGCAGTTTTTCCCACCGCGGTC TACTTTGTGTGCTGTGGCCATGATGAAGAGTATTTGGGTGCATAAGTATA TCACGCCGCATGTTGGGTGCATAAGTATATCACGCCGCATGTGTAACAAG ACACAGCCGCGTTCTGGTTTTACCCCCCATGCCTCATGTTCTCTCCAGAT GCGTCCGCCTCTCGTCTACAATATTTCACCAAATCGCCTAGAAATTTTCC CAGCTAACCCCGTAATGCTGCCTTTGGCTTCCTTGGATCATGGCGGCGAA CCCACCTTACGAGCTCCCTTTTTATTCCGATTCCATCTGGCTTCGATTCC ATGTATCAGCGGGCTTTGACGGCGATTTCAGGCGGCATTCTGCAAGCCGT GTTGCGCCAGAGCTTGCCCGAGGTTGACCCCGCCGCCTTCCTCGGCCTCA TTGATCCTGGAGAGGGACGGCAGGGCGTAGGAGGGTCCTCCCCAAAGATG TCCGCTTCGCCTCTGAGAATATGCCGCTACGCCGGCGGCGGCGATGGCGT TGCGTTCGGTGAGCGCTCACACGATCGTCGACGGCGAGACGCATGTTTTT TATTGTCAAGTAGGGGCAGCGGTTGCCACCAGAGAGCGGAAGAACAAGGG AACGGTGGCGGTGCTTTTGCCCGGCTCTTCCAGCACGTAGTGTTTGGGGG GCGATTTTCCCGCACTGTTTTGTTTCTGGTGCGCACGTTTTTATTTCCGT TCTTTGATTTGAGGGCGTAGGTGGCCTGTGACCGTCCGCATCAGTTTGGA TGAGCACGAGTACATATAAGAAGGCACTGAGAAGAGACCGAATCGGTTCA TAGTCTGAACACGACAACAACAGCATCCGTACGCACCCAGAAAGAAGCGT GTGCTGTATTATGTAAATTGCCACACGTTAACACCCAGGATTTTGGACAC ACGCCCCCACCCACGCAGGCACCCACACCGACACAACGTTCCTGACCGTG ATCCCCTGCGCTTCGGCCCCGGGGCTAGAGATCATCCAGCCCTCGACGGG TCGCTGGGTGCGGCCGGAAGCATCTCGGGACTGTCGGCCCGGGTCTGACG TCATGCTGCTCGCCGGAGAGCTGTTGCAGGTGTTCGGGAGAGGCCGGTAT CAGGCGGCCGTGCATCGCGTGGTGCGGCCAGCGGGCAGCACGGAACCCCG GGTCTCGACCCCGTTGCTGCTCCGCGGGATTGCCGGGGCTGCCATTCGAG GTTCGATGCTCCCGCCAGCGGTTGCGGCGAGACTTGAGAGAAGGTCAGAG GAAGCGAAGCAGACGCGGCGGGAGATAAGGAGGGCGGCGGGGTCATCTTC GGGGGAAGGCGACGAGGGGGGGGAGCTCAACATGACGGACTTGTGGACGG CTCTGCAGTTCAGGGGAGGCGCGACGCCGGAGTCTAACGGCGGCGCCGGC GGCGGCGGTGATGGTTGGAGCGGCGAGATCTCGGACAACGTTTCGTCCCC GCCGCTCGCCCAGGCAAAGACTACGGATCAGATCCGAGAGTGTTTCGAGC CTTACGCGCGGGATGGCGTCGCTGTCCTGAGCGTTGACCCCCTCCTAGTC CGGCTGCGCGGCTTCGCCTCCCCGGGCCAATGCTCAGCGATCATCGACCA AGGCATGGAGAGCTTGGAGCAATCCACGACGTGGGGCGGGGCCGGCGCTC AGACCGAGTCGGACGCCCTAAGGAGCAGCGCAACCACCTGGCTAGCGGAC GACTGCCTGGCGCCGCTTCTTGGAAGCTTGACGGAGAGGGTTAGTGGGAT GTCCGGCTTGCCCTCGGCGTTCATGGAGAAGTGGCAGGTGTTAGTAAACC GGGGTGTGTGGGTGAGGGGGAAGGGGGAGTCGCTGTCCTTTGGGTGAGGC CGTTTTTTGTGGTAAGCTGAGACGCGACAAATCCGCGACGGCGGGAAATT GGTGTCTCCTTCGCCGCACGTACAATTCGAGGTATGAGGTTTCGCGAGCC CGGTGTTGAGCTAGTATGTTGCAGTGCTACGGCCAGCTCTACGGCGGTTG AGGCAAGGAAATGACAGCACGGGGGTAAGCTAGCCCTCCCTGTCTCCGGT CACGCAAGACAAGTATTGCCGGCGGCGGTGGCGGCGCTTGCTAGTGTCGA TCTTTGCTATAGTCATGCATATGACCCATTCTTCCACAAACAACGCAAAC GCTATGATAGGTTGGCGGCAATCGCTTAGAAAAGGAGTTAACAAACTTGA TTACACTCTGATCGAAAACGTTGGTACGAGGATTCAAACGGTAAATTATA TGACGACTACCTTTTTATGTACAAATGTACGTGACGCCAGCCCACCAAGG GGAAAAGCGACATCTACGTCAAAACCTGTAGGCACAATTTTTGCGTCTAT TGTACTTACGTCGACTTGGTTGGCCGACGCTTGTGTTGTTTGACGAAGGT GGCACGATACCGGCCTGACGGCTACTTCAAGCTGCACACCGACCACGTGG AAGACTTCAACAGCCTTGTGTGCGGCGGGCGGCTCGGCACCCTTATCCTG TACCTCAACGACGACTTCACCGGGGGCCAGACTGACTTCCCGTTCGTGCA TGTGGCTGTAGCGCCGTTTGCCGGAGACGCCATCTACTTCCACAGCGTGG AGGTACGTACGTACGATACCGTACACGACCACGAGGCAAAGAAAGCCTTG GTGATCACAATCTAGTTTTTTATGATGACCAGGTGTGTTGTGTACGTGGG TGGCGATATATCTCATGTGGGTGTGTTATCTTGCGTGGTTCTAAACGATG TGTTCCTATGGACTGCCTTCGCGAGAAATTCAGTTCATCAAAAAATATAA CAGGGATGGGGTACGCAGACCCTATCCCTATCCCTACCCCTAACCCAACT TACCCGATTGCATGCTTTATTCAACACGTTTACGTTACAGAAAAACCCTG GGAAGGCTATTGTACTGGTGGGTGTGTTGGGGGTTTGTAGGGTATTAATT TGCGTACGTACTTGTAGGGTGTGTCGGCCGCACGTGAGTAGTAGTGCCAG GGTGTTCGTGTAGTTGTTTGAAATGTCGTATTGCATCATGAATATGCGTC ACTCAACGGTCGGTCGCGTGCACGCGCAACAGCTGCCGGTGGAAGAGGAT GCCGATTCGATGCGGCCGGACGAGAGGAGCGCGCACGCGGGGTTAGCCGT CGAGGGCGGAGACAAGTGGATCGCGACGAAGTGGATACACCCCTTGCCAT ACCCTAACGGGAGAGCTGATGACGAGGAGACTACGGAGGACCTATCACCA TACGCCGAATGGGCGCCCTACCCTCCGATCGGGGTCGCGGAATGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9410:698..5592+

>mRNA_E_fasciculatus_S2_contig9410.17458.1 ID=mRNA_E_fasciculatus_S2_contig9410.17458.1|Name=mRNA_E_fasciculatus_S2_contig9410.17458.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2211bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9410:698..5592+ (Ectocarpus fasciculatus EfasUO2)
ATGATGACGTTCACCATACTGCTGCGCACCGGGTGCAGTCGTGTCGTGAA
CGCCCGCTTCGTGCTAGCCATCGCGGCGGTGATCCTCGCCGTTGCGGATG
CTTTCCATGTGCGTGCTTCGATCCCGCTCCGCACCATTGCGACCCCACGA
AAACTGCCGTGGGCGCGGATGGCTTCAAGCGGCGACATTACCGGACTCAT
GATGAGCACCTCTATAGCTAGTACCACCACGACTACCATTACCGCTGCTG
CCACGCCTGAGGCCGCCTTGGACCCCATTATCCAAGAACTGCGAGCAAGG
ATCGTGGAAGCACCGGAGCCCTTGGAGGGGAACAGAGAGTCCCAACGGCA
TGCCGACAAGGTTCTCTCGACGACGTTCGAAGTTGACTGTGACGGGAACT
TGCTGGGCGGCGAGGGGCAAGAGCTCCGACTTGCGACGGCCCTGGCTCTG
GACACCTTTGTGGTCGTGCGAGTCAGGCCCAAACCTGCCAGGGCGTGTCT
TCGGGGGCTGGGGAGAGTGGCGGAGCAGCTTCTGGGGGAGTCCCGCACGG
TTGAAGAGAAAGTGACGGCTTTCGGCCGGATCAGAGCCGAGGGACAGTTC
GTTTCGGGGTATGCGGGAGGAGGAGACTACGGTACTGATCAGTTTCTGGA
GACAAGGGGCATCGGCGGAGACGAGATTGTCCCTCGCGTTGATGGCGATG
CTGCAGCCGATTTGATCGAGGGCAGGCGGGCTTTGACGGCGATTTCAGGC
GGCATTCTGCAAGCCGTGTTGCGCCAGAGCTTGCCCGAGGTTGACCCCGC
CGCCTTCCTCGGCCTCATTGATCCTGGAGAGGGACGGCAGGGCGTAGGAG
GGTCCTCCCCAAAGATGTCCGCTTCGCCTCTGAGAATATGCCGCTACGCC
GGCGGCGGCGATGGCGTTGCGTTCGGCACCCACACCGACACAACGTTCCT
GACCGTGATCCCCTGCGCTTCGGCCCCGGGGCTAGAGATCATCCAGCCCT
CGACGGGTCGCTGGGTGCGGCCGGAAGCATCTCGGGACTGTCGGCCCGGG
TCTGACGTCATGCTGCTCGCCGGAGAGCTGTTGCAGGTGTTCGGGAGAGG
CCGGTATCAGGCGGCCGTGCATCGCGTGGTGCGGCCAGCGGGCAGCACGG
AACCCCGGGTCTCGACCCCGTTGCTGCTCCGCGGGATTGCCGGGGCTGCC
ATTCGAGGTTCGATGCTCCCGCCAGCGGTTGCGGCGAGACTTGAGAGAAG
GTCAGAGGAAGCGAAGCAGACGCGGCGGGAGATAAGGAGGGCGGCGGGGT
CATCTTCGGGGGAAGGCGACGAGGGGGGGGAGCTCAACATGACGGACTTG
TGGACGGCTCTGCAGTTCAGGGGAGGCGCGACGCCGGAGTCTAACGGCGG
CGCCGGCGGCGGCGGTGATGGTTGGAGCGGCGAGATCTCGGACAACGTTT
CGTCCCCGCCGCTCGCCCAGGCAAAGACTACGGATCAGATCCGAGAGTGT
TTCGAGCCTTACGCGCGGGATGGCGTCGCTGTCCTGAGCGTTGACCCCCT
CCTAGTCCGGCTGCGCGGCTTCGCCTCCCCGGGCCAATGCTCAGCGATCA
TCGACCAAGGCATGGAGAGCTTGGAGCAATCCACGACGTGGGGCGGGGCC
GGCGCTCAGACCGAGTCGGACGCCCTAAGGAGCAGCGCAACCACCTGGCT
AGCGGACGACTGCCTGGCGCCGCTTCTTGGAAGCTTGACGGAGAGGGTTA
GTGGGATGTCCGGCTTGCCCTCGGCGTTCATGGAGAAGTGGCAGGTGGCA
CGATACCGGCCTGACGGCTACTTCAAGCTGCACACCGACCACGTGGAAGA
CTTCAACAGCCTTGTGTGCGGCGGGCGGCTCGGCACCCTTATCCTGTACC
TCAACGACGACTTCACCGGGGGCCAGACTGACTTCCCGTTCGTGCATGTG
GCTGTAGCGCCGTTTGCCGGAGACGCCATCTACTTCCACAGCGTGGAGCT
GCCGGTGGAAGAGGATGCCGATTCGATGCGGCCGGACGAGAGGAGCGCGC
ACGCGGGGTTAGCCGTCGAGGGCGGAGACAAGTGGATCGCGACGAAGTGG
ATACACCCCTTGCCATACCCTAACGGGAGAGCTGATGACGAGGAGACTAC
GGAGGACCTATCACCATACGCCGAATGGGCGCCCTACCCTCCGATCGGGG
TCGCGGAATGA
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