mRNA_E_fasciculatus_S2_contig941.17457.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 483 bits (1243), Expect = 3.790e-142 Identity = 276/309 (89.32%), Postives = 281/309 (90.94%), Query Frame = 3
Query: 3 TGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEATKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDDPMGRRREPRHPLGLGERDDRDRLKQELKKARKKKRRDSGADADLEDVGSDGGGDD--DFVVPIDTKAEAGGMGLLLVPLTPAELRTNYPEEYLERCLADMASRAGAVAIAEKLETDIALFKETLAKKIDEETAALATVIEXXXXXXXXXXXXXXXXXXXXASESASPVVEAD 923
TGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGME+TKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARK GA GFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDD+PMGRRREPRHPLGLGERDDRDRLKQELKKARKKKRRDS ADADLEDVGSDGGG D D VVPIDTKAEAGGMGLLLVPLTPAE+RTNYPEEYLERCLADMASRAGAVAIA+KLE D+A FKE LAKK DEETAA XXXXXXXXXXX SE ASPVVEAD
Sbjct: 2701 TGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMESTKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRREPRHPLGLGERDDRDRLKQELKKARKKKRRDSAADADLEDVGSDGGGGDGDDVVVPIDTKAEAGGMGLLLVPLTPAEMRTNYPEEYLERCLADMASRAGAVAIADKLEADLARFKENLAKKSDEETAAXXXXXXXXXXXXXXXXXSKGEEVGGDESEEASPVVEAD 3009
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 9.400e-116 Identity = 243/309 (78.64%), Postives = 252/309 (81.55%), Query Frame = 3
Query: 3 TGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEATKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDDPMGRRREPRHPLGLGERDDRDRLKQELKKARKKKRRDSGADADLEDVGSDGGGDDDFVVPIDTKAEA--GGMGLLLVPLTPAELRTNYPEEYLERCLADMASRAGAVAIAEKLETDIALFKETLAKKIDEETAALATVIEXXXXXXXXXXXXXXXXXXXXASESASPVVEAD 923
TGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGME+ KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGA GFVK SKITAGIDATTRLLDDDPMGRRREPRHPLGLGERDDRDRLKQELKKARKKKRRDS ADADLED+GSDGG GGMGLLLVPLTPA++RTNYPEEYLERCLADMASRAGAVAIA+KLE D+ +++ L KK DEETAAL V XXXXXXXXXXXX XXX ASE ASPVVEAD
Sbjct: 1605 TGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMESKKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRREPRHPLGLGERDDRDRLKQELKKARKKKRRDSAADADLEDLGSDGGXXXXXXXXXXXXXXXXXGGMGLLLVPLTPADMRTNYPEEYLERCLADMASRAGAVAIADKLEADLVRWEQNLTKKSDEETAALGIVXXXXXXXXXXXXXXKWEXXXGDASEGASPVVEAD 1913
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.190e-15 Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 3
Query: 18 IGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEATKAPEHLGQGLTQG----------MMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDDPMGRRREPR 440
G G++ LV GVVGG SA+K+ +L++ +R + G T+ HL G +G ++Y +++ GI+G+V +P+ GA++ G GF+ G+ +G+V VAAPV+ ALGA SK+T G+DA+TR + MGRRREPR
Sbjct: 425 FGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRV-RHLKHGFQRGGQXXXXXXXXVLY--DSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPR 572
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Aste57867_13032 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYR2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.170e-14 Identity = 47/130 (36.15%), Postives = 80/130 (61.54%), Query Frame = 3
Query: 21 GEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEATKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDD 410
G+G+ L+K V+G + + KM++ + + +++A D++ E P H +G+ QG M FG ++ G++G+V KP+ GA++ G GF KGVGQG +GLVA+P A+G K++ + TT L+D+
Sbjct: 2458 GQGAVTLMKTVIGAPSGAIGKMSNGVGDLLKKATHFDSQ-----EMENEPRHFPEGVLQGGMVFGMSLAHGVSGLVTKPMEGAKQNGFGGFAKGVGQGALGLVASPFVGAIGVVEKLSQSVHNTTHLMDE 2582
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 7.120e-14 Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 3
Query: 18 IGEGSKDLVKGVVGGTASSASKMTDALDNFVRE-AGCMDAEAPSGMEAT------KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDDPMGRRREPR 440
+G G+K LVKG+VGGT SA+K+T +L+ +R +G AE S ME + + L G+ QG F T+K GITG++ +P GA++ G GF+ G+ +G A S++T G+DA+TRL D+ MGRRR R
Sbjct: 1200 VGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAAR 1347
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 8.480e-14 Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 3
Query: 18 IGEGSKDLVKGVVGGTASSASKMTDALDNFVRE-AGCMDAEAPSGMEAT------KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDDPMGRRREPR 440
+G G+K LVKG+VGGT SA+K+T +L+ +R +G AE S ME + + L QG+ QG F T+K GITG++ +P GA++ G GF+ G+ +G S++T G+DA+TRL D+ MGRRR R
Sbjct: 2861 VGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAAR 3008
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Vacuolar (protein sorting 13-like protein A n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A834BI05_9CHIR) HSP 1 Score: 79.0 bits (193), Expect = 1.990e-12 Identity = 52/129 (40.31%), Postives = 69/129 (53.49%), Query Frame = 3
Query: 27 GSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEA-TKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDD 410
G K LV G VGG A +AS++T A+ V + EA K P L +G+T+G GITG+V KP++GA+KGGA GF+KGVG+G+VG VA P + S GI T D+
Sbjct: 86 GLKALVGGAVGGLAGAASRITSAMAKGVAAITMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFLKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSDE 214
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CP73_SAPPC) HSP 1 Score: 82.4 bits (202), Expect = 4.840e-12 Identity = 45/130 (34.62%), Postives = 78/130 (60.00%), Query Frame = 3
Query: 21 GEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEATKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDD 410
G+G+ L++ +VG + + K + + +++A + + EA P H+ +GL QG + G ++ +G++G+V KP++GA+ G GF KGVGQG +GLVA+P+ LG K++ + TT L+DD
Sbjct: 2456 GQGAVILMQTLVGAPSDAIGKAANGFGDILKKATYFENQ-----EADHEPRHVPEGLLQGGVLLGKSLVNGVSGLVTKPMQGAKDDGFKGFAKGVGQGTLGLVASPLIGTLGVIEKLSQSVHNTTHLMDD 2580
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PMD4_SAPDV) HSP 1 Score: 82.0 bits (201), Expect = 6.350e-12 Identity = 45/130 (34.62%), Postives = 75/130 (57.69%), Query Frame = 3
Query: 21 GEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEATKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDD 410
G+G+ L++ +VG + + K + + +++ A EA P H+ +GL QG + G ++ +G++G+V KP++GA+ G GF KGVGQG +GLVA+P LG K++ + TT L+DD
Sbjct: 2455 GQGAVILMQTLVGAPSDAIGKAANGFGDILKK-----ATYSKNQEADHEPRHVPEGLLQGGVLLGKSLANGVSGLVTKPMQGAKDDGFKGFAKGVGQGTLGLVASPFIGTLGVIEKLSQSVHNTTHLMDD 2579
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Match: Uncharacterized (protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5FVX7_DACPD) HSP 1 Score: 80.1 bits (196), Expect = 2.490e-11 Identity = 51/145 (35.17%), Postives = 75/145 (51.72%), Query Frame = 3
Query: 18 IGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMEAT---KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGATGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDDPMGRRREPRH 443
I G+ VK V G + S +K+T ++ + A D+E S T P+H G+T G F +V G G+ ++P+ GA GGA GF KG+G+G+VG V PV L S ++ GI TT + D + + R R PR+
Sbjct: 2895 IARGATSFVKKTVFGVSDSVTKITSSIGKGL-SAATFDSEFQSRRRLTLRRNKPKHALYGVTAGASAFASSVASGFEGLALRPIEGAETGGAVGFFKGIGKGLVGAVTKPVVGVLDLASNVSEGIRNTTTVFDQNDLDRVRLPRY 3038 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig941.17457.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig941.17457.1 >prot_E_fasciculatus_S2_contig941.17457.1 ID=prot_E_fasciculatus_S2_contig941.17457.1|Name=mRNA_E_fasciculatus_S2_contig941.17457.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=281bp MTDALDNFVREAGCMDAEAPSGMEATKAPEHLGQGLTQGMMYFGHTVKDGback to top mRNA from alignment at E_fasciculatus_S2_contig941:20768..25600- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig941.17457.1 ID=mRNA_E_fasciculatus_S2_contig941.17457.1|Name=mRNA_E_fasciculatus_S2_contig941.17457.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4833bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig941:20768..25600- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig941:20768..25600- >mRNA_E_fasciculatus_S2_contig941.17457.1 ID=mRNA_E_fasciculatus_S2_contig941.17457.1|Name=mRNA_E_fasciculatus_S2_contig941.17457.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=843bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig941:20768..25600- (Ectocarpus fasciculatus EfasUO2)back to top |