mRNA_E_fasciculatus_S2_contig9333.17392.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B4_ECTSI) HSP 1 Score: 378 bits (971), Expect = 1.700e-121 Identity = 196/237 (82.70%), Postives = 201/237 (84.81%), Query Frame = 1
Query: 1 VAVDEKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
VAVDEKGHPRLAEMSAAGVSYEPVGKV+GLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQS+DKSVAASQFCSFWAAKYDKLATLEF V G + +VMLPDGKSVPMTSQFRKEIIDKYA MAVRPLRCLALATKEGD LG LNKFRKGDDPQRNPSLRNADKFEE+ESDLTFVGICGIK
Sbjct: 381 VAVDEKGHPRLAEMSAAGVSYEPVGKVEGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSSDKSVAASQFCSFWAAKYDKLATLEFKE---------------------VDGTTNLRTTFLEQVMLPDGKSVPMTSQFRKEIIDKYAAMAVRPLRCLALATKEGDTLGILNKFRKGDDPQRNPSLRNADKFEEVESDLTFVGICGIK 596
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Q7_9STRA) HSP 1 Score: 243 bits (620), Expect = 4.060e-71 Identity = 128/231 (55.41%), Postives = 159/231 (68.83%), Query Frame = 1
Query: 25 PRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGD--DPQRNPSLRNADKFEEIESDLTFVGICGIK 711
P L E GVSY P G+V GL M M+D A VCA+CN+AQ+VF E+ Y +GEPTEAAL VLVEK+GVPG+ +S + S Q +WA+ Y KLATLEF+R+RKSMSVLC+ NRLFVKGAPEML+KRCTKVMLP GK V +T +FR++++ + + +A RPLRCLALA KEGD LG L F D + +P L + F+ IESDLTFVG+CGIK
Sbjct: 307 PSLKEYEVEGVSYVPEGQVVGLGAQGMNTKNMQDAARVCALCNEAQVVF--EDDLYRHLGEPTEAALKVLVEKMGVPGLTKSEEPSEKCRQCNEYWASSYRKLATLEFSRDRKSMSVLCKDSNGS--NRLFVKGAPEMLLKRCTKVMLPSGKVVKLTPEFREKVMGQVSDLARRPLRCLALALKEGDDLGQLKSFSPTDSNEASNHPLLNDVKNFQSIESDLTFVGLCGIK 533
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D109_9STRA) HSP 1 Score: 233 bits (594), Expect = 7.170e-67 Identity = 125/237 (52.74%), Postives = 163/237 (68.78%), Query Frame = 1
Query: 16 KGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHG-----GMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
+G ++E + GVSY P G V+GL G G+ D+AT+ A+CN+A+IVF ++G + RIGEPTEAAL VLVEKL +PG ++ D VA SQ+ +W KY KLATLEF+R+RKSMSVLCR + N+LFVKGAP++LV RCT++ L GK+VP+T++ R I+ K +MAVRPLRCL LA KEG LG LNK ++ +P LRN +F +IES LT VGICGIK
Sbjct: 490 EGGAVMSEFAVEGVSYNPSGAVEGLMPSGPGAGNALPKGIEDIATIAALCNEAKIVF--QDGKFERIGEPTEAALKVLVEKLHIPGEPRNEDPFVACSQYSKYWEGKYAKLATLEFSRDRKSMSVLCRP-WNGGGNKLFVKGAPDLLVARCTRLRLASGKTVPLTNEMRHRIMAKVESMAVRPLRCLGLAMKEGGELGALNKVSTEEEAASSPLLRNPAQFGQIESGLTLVGICGIK 723
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB3_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.640e-64 Identity = 124/225 (55.11%), Postives = 148/225 (65.78%), Query Frame = 1
Query: 37 EMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
E + +G SYEP+G V GL + AM H G RDLA VC++CNDA+IVF EEG + R+GEPTEAAL VLVEK ++Y KLATLEFNR+RKSMSVL + G NRL VKGAPEML+ RCTKV LP G+ VP+T ++R + K MA RPLRCLALA KEG LG L F +GDDP +P LR+ F +IESDLTFVG+ GIK
Sbjct: 475 ECAVSGTSYEPIGTVSGLEEGAMSHAGRRDLARVCSICNDARIVF--EEGKFTRVGEPTEAALCVLVEK------------------------SEYTKLATLEFNRDRKSMSVLVQPVGGG-ENRLLVKGAPEMLLARCTKVKLPSGEVVPLTDEYRTSLKQKILEMAERPLRCLALALKEGKDLGELANFTQGDDPAAHPLLRDFHNFVQIESDLTFVGLAGIK 672
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M5_HETAK) HSP 1 Score: 211 bits (536), Expect = 4.810e-59 Identity = 120/235 (51.06%), Postives = 153/235 (65.11%), Query Frame = 1
Query: 25 PRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQ---SADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALG---NLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
P LAE + GVSY P G+V L AM G++DLA V A+CNDA + F EG + GEPTEAAL VLVEKLGV G+ + + D ++A Q W A+Y K+ATLEF+R+RKSMSVL R G NRLFVKGAPEML+ RC++V LP G+ VP+ + +R++I++K MA RPLRCLALA KE + LG +L+ G D +P L + F IE LTFVG+ GIK
Sbjct: 447 PGLAEYAVEGVSYNPAGQVVDLKPGAMAQEGLKDLARVMALCNDANVDF-VGEGGFQHRGEPTEAALRVLVEKLGVDGLPRPDAAQDPALACKQANQHWEAEYKKMATLEFSRDRKSMSVLVR--GADGANRLFVKGAPEMLLDRCSRVRLPSGEVVPLNASYRRQILEKNTEMATRPLRCLALAVKEAEDLGALADLDLEAGGADAAAHPLLNDPKHFAGIEQGLTFVGLAGIK 678
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BBV2_CHRCT) HSP 1 Score: 204 bits (518), Expect = 1.430e-56 Identity = 112/238 (47.06%), Postives = 147/238 (61.76%), Query Frame = 1
Query: 13 EKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCR-TRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQ----RNPSLRNADKFEEIESDLTFVGICGIK 711
EK L E G +Y PVGKV GL + + G A C +CNDA++ + E+G YGR+GEPTEAAL +VEK+G+PG D + A + F + AA + K+ATLEF+R RKSMSVLC T G + N LF KGAPE L+ RCT + L DG ++ M+ ++RK I ++++ MA RPLRCLALA KEG L L +R D P RN L +F E+E LTF+G+ GIK
Sbjct: 508 EKREQGLREYPVEGTTYRPVGKVQGLTEQVLGGKGAEQFAAACTMCNDAELTYSKEDGVYGRVGEPTEAALKAMVEKMGLPGTPPPPDAAAATNHFGALRAAAWSKVATLEFSRARKSMSVLCAPTNGGK--NTLFAKGAPEHLLPRCTHLRLADGTTLRMSDEWRKAITEQFSGMATRPLRCLALAVKEG-GLNKLADYRGSDAPHPRWVRN-LLATPSRFVEVEQGLTFLGLVGIK 741
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZD7_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.730e-56 Identity = 109/229 (47.60%), Postives = 148/229 (64.63%), Query Frame = 1
Query: 31 LAEMSAAGVSYEPVGKVDGL-ADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPS-LRNADKFEEIESDLTFVGICGIK 711
L E GVSY+P G V+G+ + + G+ DLA ++CNDA++V ++G + R+GEPTEAAL VL EKLG PG+ + A +FW+++Y+KLATLEFNR+RKSMSVL R P NRLFVKGAPEML++RC V LP G+++ MT + + I +K+ MA RPLRCLA A KEG +G L ++ + P L++ KF +ESDL F G+ GIK
Sbjct: 272 LTEHPVPGVSYDPRGSVEGVDLAELTKQKGLLDLAACASLCNDARLVL-RDDGGFDRVGEPTEAALKVLAEKLGAPGVEKPDSPEKACDNANAFWSSRYEKLATLEFNRDRKSMSVLVRPTDGGP-NRLFVKGAPEMLLERCKYVRLPGGRTMLMTPEIKASITEKFQEMARRPLRCLATAVKEGVNMGKLGRWEGSESEADVPDMLKDPTKFANVESDLVFTGLIGIK 498
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BTR3_9EUKA) HSP 1 Score: 191 bits (485), Expect = 2.620e-53 Identity = 112/236 (47.46%), Postives = 150/236 (63.56%), Query Frame = 1
Query: 13 EKG-HPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNL-NKFRKGDDPQRNPSL-RNADKFEEIESDLTFVGICGIK 711
EKG R+ E G SYEP GKV GL +E GM LATVCA+CNDA+I + EGA+ R+GEPTEAAL VLVEK+G+ A +AS + +A++ ++ATLEF+R RKSMSVLCR+ HN LF+KGAPE ++ RC + + DG ++ MT ++R+++ ++ MA RPLRCLALA KE LG L N G P R +L N + ++E +TFVG+ GIK
Sbjct: 19 EKGIDGRIREYEVEGTSYEPRGKVRGLLPRTVEGQGMTSLATVCALCNDAEISYT--EGAFTRVGEPTEAALKVLVEKIGLTNTPPPATVEQSASYYSDMRSAEWTRVATLEFSRRRKSMSVLCRS-SSTGHNSLFIKGAPESVLPRCAFLRMSDGTTIRMTDEWRQKLRAQFEEMARRPLRCLALAVKENQ-LGLLENVSEPGQLPPRAQALLSNPESLIDVEQGMTFVGLVGIK 250
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Putative (serca-type calcium ATPase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K612_9EUKA) HSP 1 Score: 186 bits (473), Expect = 1.570e-50 Identity = 111/230 (48.26%), Postives = 143/230 (62.17%), Query Frame = 1
Query: 28 RLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRK-GDDPQRN-PSLRNADKFEEIESDLTFVGICGIK 711
R+ E GVSY P G V GL + G DLA VC +CNDA+I + +G + R+GEPTEAAL VLVEK+G+P +AS + S A+++ ++ATLEF+R RKSMSVLCR R N LFVKGAPE L+ RC V L DG +V MT ++R+++ ++ MA RPLRCL LA K+ D LG L + G P R P L +A F +ES LTFVG+ GIK
Sbjct: 442 RVREYEVEGVSYSPAGAVLGLQPSTILGSGFADLAAVCTLCNDAEIGYT--DGQFTRVGEPTEAALKVLVEKIGLPNTPSPTTVEASASHYSSLRASEWTRVATLEFSRERKSMSVLCRHRRTNL-NSLFVKGAPEGLLPRCDFVRLVDGTTVRMTDEWRRKLQTQFDEMARRPLRCLVLAVKD-DELGELGEISAPGVMPARAAPLLADASGFANLESGLTFVGMVGIK 667
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUP0_DIALT) HSP 1 Score: 182 bits (463), Expect = 3.410e-49 Identity = 117/251 (46.61%), Postives = 151/251 (60.16%), Query Frame = 1
Query: 7 VDEKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCS-FWAAKYDKLATLEFNRNRKSMSVLCRTRGD--------QPHNR-----LFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFR--KGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
V G LAE + GVSY P G V GL+ A G+ L+ VC++CN+AQIV++A Y RIGEPTEAAL VLVEKLG+P +A++ DK+ AAS C+ W Y A LEF+R+RKSM VL QP R L VKGAPE +++RCT + L DG VP+T R I+ K+ MA RPLR LA+A KE LG+L+ + KG + +L +A +F +IES LTFVG+ GIK
Sbjct: 369 VHASGESDLAEYAVEGVSYRPEGAVVGLSGAAAAAKGVLALSKVCSLCNEAQIVYNATSDKYERIGEPTEAALKVLVEKLGLPTVARTQDKA-AASVVCNRAWGVAYKLEALLEFSRDRKSMGVLVSPSAAAGALPTAAQPPARAGGTQLLVKGAPESVLERCTLLRLVDGSDVPITPASRARILAKFNEMARRPLRVLAMACKE--ELGDLSDYTADKGAAHPMHKALADASRFAQIESGLTFVGLVGIK 616 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9333.17392.1 >prot_E_fasciculatus_S2_contig9333.17392.1 ID=prot_E_fasciculatus_S2_contig9333.17392.1|Name=mRNA_E_fasciculatus_S2_contig9333.17392.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=237bp VAVDEKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCback to top mRNA from alignment at E_fasciculatus_S2_contig9333:857..5487+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9333.17392.1 ID=mRNA_E_fasciculatus_S2_contig9333.17392.1|Name=mRNA_E_fasciculatus_S2_contig9333.17392.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4631bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9333:857..5487+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9333:857..5487+ >mRNA_E_fasciculatus_S2_contig9333.17392.1 ID=mRNA_E_fasciculatus_S2_contig9333.17392.1|Name=mRNA_E_fasciculatus_S2_contig9333.17392.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=711bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9333:857..5487+ (Ectocarpus fasciculatus EfasUO2)back to top |