mRNA_E_fasciculatus_S2_contig9274.17328.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9274.17328.1
Unique NamemRNA_E_fasciculatus_S2_contig9274.17328.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Exonuclease (1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 969 bits (2506), Expect = 0.000e+0
Identity = 539/786 (68.58%), Postives = 563/786 (71.63%), Query Frame = 2
Query:   59 IEECAREVKLFEDRSFLVTVVFDGRPPPAKGGTFQHRRERREKSAQQARALHDAGGSSRGDQQVGQSLC-FRRSSFR*DRNALESPYRGGGLYRPRRSGSTAFVVFQDIHLATGANVYVYANDSDLTAVLGVRDLLVEVVKNTRGELVGRCVRQRL-FQPTAWSFLRTGGAHGWLRQLHGIHTPVDEGLYCTPLPEPTARRRLLLFAMIVGNHRLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPPNASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV---------------------------------------------------------------------------------------------------------------------------------------AGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHCKGSRSAKQCDLYGMSMSEGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAERKVHFDAGENISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREDSNSAHSA 2005
            +EECAR++KLFEDR+FLVTVVFDGRPPPAK GT QHRRERR+KSAQQARALHDAGG      ++  + C F           L +  RG     P  +     VVFQDIHLATGANVYVYANDSDLT VLGVRDLLVEVVKN RGELVGRCVRQRL FQPTAWSFLR+G AHGWLRQLHGIH PVDEGL  TPLPEPTARRRLLLFA+IVGN   +            AFVD+ESGVWAASLLPFDAVVG LA+ LLVESREEDTPA RRE EIRLRACHTMFTQPVVWNPLSGELQH SGAPT E+ITRH GT ELSPLAS VAR D CPLTGREWDPPLGTAQAKGQA GED GRQKKRATPET S+RPPNASSR SR RGPQDTNNYREHGFSRLP ETEDYTK TVPKLREFL V                                                                                                                                       AGASFSADKEYR+RIKLRVEEVDE+APPT    XXXXXXX VVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQH KGSRSAKQC+LYGMSMS GTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWA RKVHFDAGE+ISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVRE++NS+H A
Sbjct:   21 VEECARDMKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEA-DPQLVVFQDIHLATGANVYVYANDSDLT-VLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREENNSSHFA 804          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 662 bits (1708), Expect = 2.520e-224
Identity = 388/621 (62.48%), Postives = 405/621 (65.22%), Query Frame = 2
Query:   59 IEECAREVKLFEDRSFLVTVVFDGRPPPAKGGTFQHRRERREKSAQQARALHDAGGSSRGDQQVGQSLCFRRSSFR*DRNALESPYRGGGLYRPRRSGSTAFVVFQDIHLATGANVYVYANDSDLTAVLGVRDLLVEVVKNTRGELVGRCVRQRL-FQPTAWSFLRTGGAHGWLRQLHGIHTPVDEGLYCTPLPEPTARRRLLLFAMIVGNHRLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPPNASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV---------------------------------------------------------------------------------------------------------------------------------------AGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAG 1513
            +EECAREVKLFEDR+FLVTVVFDG+PPPAKGGT QHRRERREKSAQQARALH AGG      ++  + C        +         GG +Y          VVFQDIHLATG NVYVYANDSDLT VLGVRDLLVEVVKNTRGEL+GRCVRQRL FQPTAWSFLR+G AHGWLRQLHGIHTPVDEGL  TPLPEPTARRRL+LFAMIVGN   +            AFVD+ SGVWA SLLPFDAVVGDLA+ LLVES+EEDTPAA REVEIRLRACHTMFTQPVVWNPLSGELQH SGAPTSEDITRHTGTLELSPLASGVARGDVCPLTG EWDPPLGTAQAKGQA GED  R KK+ TPE  SSRPPNASSRTSR RGPQ+TNNYR HGFSRLPGETEDYTKWTVPKLREFL V                                                                                                                                       AGASFSADKEYRVRIKLRVEEVDENAPPT    XXXXXXX VVGNDPRSAQTLVALEVIAALCECPAG
Sbjct:  266 VEECAREVKLFEDRNFLVTVVFDGQPPPAKGGTSQHRRERREKSAQQARALHAAGGCPMEVNKLASAACAFDGRVTAEIATRLRARIGGEVYIAPGEADPQLVVFQDIHLATGPNVYVYANDSDLT-VLGVRDLLVEVVKNTRGELIGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHTPVDEGLDYTPLPEPTARRRLVLFAMIVGNDFAKFKNVGPVTAARLAFVDAASGVWATSLLPFDAVVGDLASRLLVESKEEDTPAAWREVEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGGEWDPPLGTAQAKGQAAGEDASRPKKKVTPEIASSRPPNASSRTSRARGPQETNNYRAHGFSRLPGETEDYTKWTVPKLREFLTVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRHLPEISKAVILRFMREVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVSAAGGIMWIGTSAGASFSADKEYRVRIKLRVEEVDENAPPTEXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAG 885          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Exonuclease (I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI)

HSP 1 Score: 610 bits (1574), Expect = 5.820e-208
Identity = 375/667 (56.22%), Postives = 393/667 (58.92%), Query Frame = 2
Query:   62 EECAREVKLFEDRSFLVTVVFDGRPPPAKGGTFQHRRERREKSAQQARALHDAGGSSRGDQQVGQSLCFRRSSFR*DRNALESPYRGGGLYRPRRSGSTAFVVFQDIHLATGANVYVYANDSDLTAVLGVRDLLVEVVKNTRGELVGRCVRQRLFQPTAWSFLRTGGAHGWLRQLHGIHTPVDEGLYCTPLPEPTARRRLLLFAMIVGNHRLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPPNASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV---------------------------------------------------------------------------------------------------------------------------------------AGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHCKGS 1657
            EECAR++KLFED +FLVTVVFDGRPPP K GT QHRRERR+KSAQQARALHDAGG      ++  + C        +          G +Y          VVFQDIHLATGANVYVYANDSDLT VLGVRDLLVEVVKN                                                      T+R   +   ++                   AFVD+ESGVWAASL PFDAVVGDLA+ LLVESREEDTPAARRE EIRLRACHTM TQPVVW+PLSGELQH SGAPT E+ITRHTGTLELSPLAS VARGDVCPLTGREWDPPLGTAQAKGQA GED GRQKKRATPET S+RPPNASSR SR RGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFL V                                                                                                                                       AGASFSADKEYRVRIKLRVE VDENAPPT QE XXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQH KGS
Sbjct:   22 EECARDMKLFEDHNFLVTVVFDGRPPPVKSGTSQHRRERRKKSAQQARALHDAGGCPVEINKLASAACAFNGRVTAEIATRSRALIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLT-VLGVRDLLVEVVKNAT----------------------------------------------------TSRNSKMSDQLLPAR---------------LAFVDTESGVWAASLQPFDAVVGDLASRLLVESREEDTPAARREFEIRLRACHTMVTQPVVWDPLSGELQHLSGAPTREEITRHTGTLELSPLASRVARGDVCPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDTAGTSGFKKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVISRFLGEVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRVRIKLRVEGVDENAPPTEQEXXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGS 620          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Exonuclease (1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 9.440e-159
Identity = 322/800 (40.25%), Postives = 397/800 (49.62%), Query Frame = 2
Query:   59 IEECAREVKLFEDRSFLVTVVFDGRPPPAKGGTFQHRRERREKSAQQARALHDAGGSSRGDQQVGQSLCFRRSSFR*DRNALESPYRGGGLYRPRRSGSTAFVVFQDIHLATGANVYVYANDSDLTAVLGVRDLLVEVVKNTRGELVGRCVRQRL-FQPTAWSFLRTGGAHGWLRQLHGI---HTPVDEGLYCTPLPEPTARRRLLLFAMIVGNH--RLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPPNAS-----------------SRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV---------------------------------------------------------------------------------------------------------------------------------------AGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHCKGSRSAKQCDLYGMSMSEGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAERKVHFDAGENISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVRED 1984
            ++ECA EV  FE R F VTVV DG  PPAK  T + RR +RE +A +AR L   GG      +   + C   S        L  P   G +Y   R      V+FQDI+L TG  VYVYANDSDL  VLGVR LL +V     G L G C+R RL FQP  W+F      + +LRQLHG+   HTP    L  +PL E  ARRRL LFA + GN     + I            ++ +    AA ++ F+A+VG+LA  ++ +S+EE+TPAA  E E +LR  H MF   VVW+PL   L+HFSGA +S  IT+ TGTLE S +ASG+A G+V P TG+ W PPL   +            Q+ R     P S+PP                    ++ SR     DTNNY +HGFSRLPG  ED+ KWTV +LREFL V                                                                                                                                       AGASFS  K Y VRI+LRVE +DE+A P+  EE          G  PR    LVAL V+AALCECPAGI GGCSH AM LFL RLLQM+E++LATFNP+TCTG AC WIMQ+CKG RS +QC LYG  +S GT VVR +RDP+   G+DDD      GV  IDRM  FNPHP+GG W E K+HFDAG++ S+ K DKL+AFV+  R  D++ V +DYLPP VRED
Sbjct:   60 VKECAAEVSRFESRGFKVTVVLDGSTPPAKKSTSEARRTKREAAASEARELQRTGGRLTEINKKASNACVFDSRVVARVATLLRPQIAGEVYIAPREADPQIVIFQDIYLETGCTVYVYANDSDLI-VLGVRSLLWDVRGTDAGNLTGVCIRSRLIFQPPEWAFAIDAEGYAFLRQLHGLPRGHTP---NLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAA-VVSFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRAHNMFHNAVVWDPLKNTLRHFSGAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIA----------QELRRATRRPGSQPPXXXXXXXXXXXXXXXXXXXXNKRSRNAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLGQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMSAGASFSDTKTYEVRIQLRVEALDESAHPSAAEEEGRGVES---GQWPRPP--LVALGVVAALCECPAGISGGCSHTAMVLFLTRLLQMTEDELATFNPSTCTGRACSWIMQNCKGGRSGEQCSLYGEPLSHGTNVVRKMRDPRR--GFDDDLLAKVQGVTAIDRMQHFNPHPSGGKWDELKLHFDAGKDFSRFKMDKLLAFVDCARGPDNRAVAMDYLPPLVRED 837          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 463 bits (1192), Expect = 1.450e-151
Identity = 269/412 (65.29%), Postives = 286/412 (69.42%), Query Frame = 2
Query:   80 VKLFEDRSFLVTVVFDGRPPPAKGGTFQHRRERREKSAQQARALHDAGGSSRGDQQVGQSLC-FRRSSFR*DRNALESPYRGGGLYRPRRSGSTAFVVFQDIHLATGANVYVYANDSDLTAVLGVRDLLVEVVKNTRGELVGRCVRQRL-FQPTAWSFLRTGGAHGWLRQLHGIHTPVDEGLYCTPLPEPTARRRLLLFAMIVGNHRLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPPNASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV 1309
            +KLFEDR+FLVTVVFDGRPPPAK GT QHRRERR+KSAQQARALHDAGG      ++  + C F           L +  RG     P  +      VFQDIHLATGANVYVYANDSD T VLGV DLLVEVVKN RGELVGRCVRQRL FQPT WSFLR+G   G LRQLHGIH PVDEG   TPLPEPTARRRLLLFA+IVG    +            AFVD+ES            V G       +   E            R R    +   PVVWNPLSGELQH SGA T E+ITRHTGTLELSPLAS VARGD+C LTGREWDPPLGTAQ KGQA G D GRQKK+ATPET SSRP NASSR SR RGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFL V
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVNIAPGEA-DPQLAVFQDIHLATGANVYVYANDSDFT-VLGVLDLLVEVVKNARGELVGRCVRQRLLFQPTTWSFLRSGDVRGRLRQLHGIHQPVDEGFDYTPLPEPTARRRLLLFAIIVGKDFAKFKNVGPVTAARLAFVDTES------------VSGRHLCYHSMRLWETWPQGCWWSPGRRTR----LLRGPVVWNPLSGELQHLSGASTREEITRHTGTLELSPLASRVARGDICLLTGREWDPPLGTAQGKGQAAGADAGRQKKKATPETASSRPSNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSV 394          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 1.880e-141
Identity = 294/559 (52.59%), Postives = 322/559 (57.60%), Query Frame = 2
Query:   80 VKLFEDRSFLVTVVFDGRPPPAKGGTFQHRRERREKSAQQARALHDAGGSSRGDQQVGQSLC-FRRSSFR*DRNALESPYRGGGLYRPRRSGSTAFVVFQDIHLATGANVYVYANDSDLTAVLGVRDLLVEVVKNTRGELVGRCVRQRL-FQPTAWSFLRTGGAHGWLRQLHGIHTPVDEGLYCTPLPEPTARRRLLLFAMIVGNHRLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAAR-REVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTG--REWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPPNASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV--------------------------------------------------------------------------------------------------AGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGND 1447
            +KLFEDR+FLVTVVFDGRPPPAK GT QHRRERR+KSAQQARALHDAGG      ++  + C F           L +  RG     P ++     VVFQDIHLATGANVYVYANDSDLT VLGVRD LVEVVKN RGELVGR VRQRL FQPTAWSFLR+G AHGWLRQLHGIH PVDEGL  TPLPEPT RRRLLLFA+IVGN   +            AFVD+ESGVWAASLLPFDAVVGDLA+ LLVESREEDTPAAR R VE   R   T   +P                   +    H    ++  + +GV  G    L+       P  G +  +G  G     + ++RAT ET S+RPPNASSR SR RGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREF+ V                                                                                                  AGASFSADKEYRVRIKLRVEEVDENA PT Q  XXXXXXXEVVGND
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGKA-DPQLVVFQDIHLATGANVYVYANDSDLT-VLGVRDRLVEVVKNARGELVGRSVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTGRRRLLLFAVIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGDLASRLLVESREEDTPAARPRGVEPAERRTPTFVRRP-------------------DQGGNHPPYRDVGAIPAGVPCGPGRCLSADRARMGPTAGYSTNEGAGGRRGCWQAEERATLETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFVSVYRCLDNAGTSGFNKALLAQMAGDVVRVIRSCGVLDTNLAFRHPVPDLSSFEEEEARLMPDLPATGLRIKIAAAVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRVRIKLRVEEVDENAHPTEQXXXXXXXXXEVVGND 538          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L7_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.860e-45
Identity = 113/269 (42.01%), Postives = 148/269 (55.02%), Query Frame = 2
Query:  566 HGWLRQLHGI---HTPVDEGLYCTPLPEPTARRRLLLFAMIVGNH--RLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPP----------------NASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV 1309
            + +LRQLHG+   HTP    L  +PL E  ARRRL LFA + GN     + I            ++ +    AA ++PF+A+VG+LA  ++ +S+EE+TPAA  E E +LR  H MF   VVW PL   L+HFS A +S  IT+ TGTLE S +ASG+A G+V P TG+ W PPL  A+            Q+ R     P S+PP                   ++ SR     DTNNY +HGFSRLPG  ED+ KWTV +LREFL V
Sbjct:    6 YDFLRQLHGLPRRHTP---NLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAA-VVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSHNMFHNAVVWGPLKNTLRHFSCAASSLAITKDTGTLEFSYVASGIASGEVSPTTGQVWAPPLLEARMA----------QEFRRATRRPGSQPPXXXXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV 260          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 5.750e-44
Identity = 112/266 (42.11%), Postives = 148/266 (55.64%), Query Frame = 2
Query:  566 HGWLRQLHGI---HTPVDEGLYCTPLPEPTARRRLLLFAMIVGNH--RLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLLVESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPP-------------NASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV 1309
            + +LRQLHG+   HTP    L  +PL E  ARRRL LFA + GN     + I            ++ +    AA ++PF+A+VG+LA  ++ +S+EE+TPAA  E E +LR    MF   VVW+PL   L+HFS A +S  IT+ TGTLE S +ASG+A G+V P TG+ W PPL   +   +          +RAT    S  PP                ++ SR     DTNNYR+HGFSRLPG  ED+ KWTV +LREFL V
Sbjct:    6 YDFLRQLHGLPRRHTP---NLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAA-VVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSQNMFHNAVVWDPLKNTLRHFSCAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEF---------RRATRRAGSQMPPXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYRKHGFSRLPGAEEDFNKWTVAQLREFLSV 258          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMS4_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 3.160e-27
Identity = 58/72 (80.56%), Postives = 60/72 (83.33%), Query Frame = 2
Query: 1100 AGGEDGGRQKKRATPETPSSRPPNASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQVAG 1315
            A GED  R KK+ TPE  SSRPPNASSRTSR RGPQ+TNNYR HGFSRLPGETEDYTKWTVPKLREFL   G
Sbjct:    3 AAGEDASRPKKKVTPEIASSRPPNASSRTSRARGPQETNNYRAHGFSRLPGETEDYTKWTVPKLREFLSATG 74          
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.210e-24
Identity = 70/156 (44.87%), Postives = 85/156 (54.49%), Query Frame = 2
Query:  896 MFTQPVVWNPLSGELQHFSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGRQKKRATPETPSSRPPN----------------ASSRTSRPRGP--QDTNNYREHGFSRLPGETEDYTKWTVPKLREFLQV 1309
            MF   VVW+PL   L+HFSGA +S  IT  TGTLE S +ASG+A G+V P TG+ W PPL   +            Q+ R     P S+PP                 ++SR  R R     DTNNY +HGFSRLPG  ED+ KWTV +LREFL V
Sbjct:    1 MFHNAVVWDPLKNTLRHFSGAASSLAITNDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIA----------QEFRRATRRPGSQPPXXXXXXXXXXXXXXXXXSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9274.17328.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
Exonuclease0.000e+068.581 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI[more]
Uncharacterized2.520e-22462.48protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Exonuclease5.820e-20856.22I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Exonuclease9.440e-15940.251 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726... [more]
Uncharacterized1.450e-15165.29protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.880e-14152.59protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.860e-4542.01protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.750e-4442.11protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.160e-2780.56protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.210e-2444.87protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9274contigE_fasciculatus_S2_contig9274:2150..5714 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score703.4
Seed ortholog evalue6.9e-200
Seed eggNOG ortholog2880.D7G0K2
Model size2404
KEGG koko:K10746
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.5'-3' exodeoxyribonuclease activity
EggNOG OGsCOG0258@1,KOG2518@2759
Cds size1335
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842576.9352956-UTR-E_fasciculatus_S2_contig9274:2149..28221696842576.9352956-UTR-E_fasciculatus_S2_contig9274:2149..2822Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9274 2150..2822 +
1696842576.9841638-UTR-E_fasciculatus_S2_contig9274:5318..57141696842576.9841638-UTR-E_fasciculatus_S2_contig9274:5318..5714Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9274 5319..5714 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842576.950232-CDS-E_fasciculatus_S2_contig9274:2822..31381696842576.950232-CDS-E_fasciculatus_S2_contig9274:2822..3138Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9274 2823..3138 +
1696842576.9613807-CDS-E_fasciculatus_S2_contig9274:3495..38141696842576.9613807-CDS-E_fasciculatus_S2_contig9274:3495..3814Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9274 3496..3814 +
1696842576.9731941-CDS-E_fasciculatus_S2_contig9274:4618..53181696842576.9731941-CDS-E_fasciculatus_S2_contig9274:4618..5318Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9274 4619..5318 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9274.17328.1prot_E_fasciculatus_S2_contig9274.17328.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9274 2823..5318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9274.17328.1

>prot_E_fasciculatus_S2_contig9274.17328.1 ID=prot_E_fasciculatus_S2_contig9274.17328.1|Name=mRNA_E_fasciculatus_S2_contig9274.17328.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=445bp
MIVGNHRLREIQKCWTCYCGKAFVDSESGVWAASLLPFDAVVGDLAASLL
VESREEDTPAARREVEIRLRACHTMFTQPVVWNPLSGELQHFSGAPTSED
ITRHTGTLELSPLASGVARGDVCPLTGREWDPPLGTAQAKGQAGGEDGGR
QKKRATPETPSSRPPNASSRTSRPRGPQDTNNYREHGFSRLPGETEDYTK
WTVPKLREFLQVAGASFSADKEYRVRIKLRVEEVDENAPPTGQEEKEREE
EEEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQM
SEEQLATFNPTTCTGMACRWIMQHCKGSRSAKQCDLYGMSMSEGTTVVRS
VRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAERKVHFDAGE
NISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREDSNSAHSA*
back to top

mRNA from alignment at E_fasciculatus_S2_contig9274:2150..5714+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9274.17328.1 ID=mRNA_E_fasciculatus_S2_contig9274.17328.1|Name=mRNA_E_fasciculatus_S2_contig9274.17328.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3565bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9274:2150..5714+ (Ectocarpus fasciculatus EfasUO2)
GGGAGGTGGCGGCGGCAAATTTACTTCTCAACAACGACGTCTGTCTCCCG TCAAGTAGATAGAGGAGTGTGCCCGAGAGGTGAAGCTCTTTGAAGACCGC AGTTTCCTAGTGACGGTAGTGTTCGACGGTCGGCCGCCTCCGGCCAAGGG TGGGACATTTCAACACCGACGAGAGAGAAGGGAGAAGAGTGCACAACAGG CGCGCGCTCTACACGACGCCGGTGGCTCTTCCCGTGGAGATCAACAAGTT GGCCAGAGCTTGTGCTTTCGACGGTCGAGTTTCCGCTGAGATCGCAACGC GCTTGAGAGCCCGTACCGGGGGGGAGGTTTATATCGCCCCAGGCGAAGCG GATCCACAGCTTTTGTAGTTTTCCAGGACATCCATCTCGCAACAGGGGCG AACGTGTACGTGTATGCCAATGACTCCGACTTGACAGCAGTTCTTGGGGT GCGGGATCTGTTGGTGGAAGTGGTCAAGAACACGAGAGGAGAGCTTGTCG GGAGATGCGTCCGGCAGAGGCTCTTCCAACCCACGGCATGGTCCTTCCTC CGGACTGGGGGTGCTCATGGGTGGCTGCGCCAGCTGCACGGAATACACAC GCCAGTTGACGAGGGCCTATACTGCACGCCTCTACCGGAACCGACCGCCC GCCGCCGCCTCCTCTTGTTCGCCATGATCGTAGGCAACCACCGACTTCGC GAAATTCAAAAATGTTGGACCTGTTACTGCGGCAAGGCTTTCGTTGACTC CGAGAGCGGTGTCTGGGCGGCATCTTTGCTGCCATTCGATGCGGTAGTGG GAGACCTGGCCGCAAGTCTGCTGGTGGAGTCCAGGGAGGAGGACACGCCT GCTGCGCGGCGTGAGGTTGAGATCCGCCTGCGCGCCTGCCACACCATGTT TACACAGCCCGTGGTGTGGAACCCGCTGAGCGGCGAACTCCAACATTTTT CCGGCGCGCCGACCAGCGAGGACATCACCCGCCATACAGGTCAGTGTTGG TGGCGTGTGTAGGAATGCTCCTCATACATAATACCAGCTTTTGAATGGTG TTTCCCGACGTCACCCTACTTGTAGTCGGGCGCCAGCAGTGAGACCTTAC ATCTGCGTGCAGCAAGGAGGGCTGCTGTACCTTCAAACATTCTGCGGCCT GTCTACAAGTAGTAGATTTGTTGTATTCAACCTCAACCAGGCTTTGCTCG TCCCGTGATTACACCGCTCCCGCTACTGCATATTTGTCTAAACCTGCTGT ACTGACTGATGTATATGCAGATACATTTAGTGACGGCGTTGCATATACTA TCGACTGAACTGACTTCATTGTCATGCTCGCATCCCGCACGTACAGGGAC ATTGGAGCTATCCCCGCTGGCGTCCGGCGTGGCCCGGGGAGATGTCTGTC CGCTGACCGGGCGCGAATGGGACCCACCGCTGGGTACAGCACAGGCGAAG GGGCAGGCGGGAGGCGAGGATGGTGGCAGGCAGAAGAAAAGGGCAACACC CGAGACGCCTAGCAGTCGCCCCCCGAATGCTAGTAGCAGGACTTCTCGCC CTCGAGGTCCTCAAGACACAAATAACTACCGCGAGCACGGCTTCAGCAGA CTCCCTGGGGAGACTGAAGATTACACCAAGTGGACCGTGCCTAAGCTTCG CGAGTTTCTACAAGTGTGAGTAAAATATTTTTTTTTTAGCGACACATTTT GTAGAGAGCTGTTGCCAGTAGGTTACCATTAGTTGGAGAGGGTACGTACA GTGCTAGCTGTGACAGAATATTTGGTCCATAGACCATTGCTACATCGAAG TTTATTTTGGGCAAAAGATGCATCCTGTGTTGTAAACTTGGCGTTTCGTA ATATTTCAGCTTCCGAGTGCGCCCGTCGACCATCAAGCAGCAGGTAGAGC GATGTGCGCACACACGCGTACCAATGTCGGTCCGCACACGAAAGAGACCA CACACCACGTGCCGCTTCTAACCTAGCGCACTATGCATACGGCTGCTGTT AATATGGTTCGGGGCGGATATCCCGATTGGTTCATTTGGATTGGTGTACT TAGACGGAGTATGCTTGGTCTAGTCCCGACGTACGATTCGACGGTGACAG CGCAGCATGTTGCCACCCGGGTCTATGTGCACCATGTGCACACGTACTTT CCGTTGCATTTGTACTTTTCTGTCTTCACCATGTTTACAACCGTGTAGAT GTTCCCGTCGGTACGACGCTGATGCCAGCATCGTACACAACACAAGTTAC CCGCTACGAACCTCGAGGGATAGACGCGTTCCGCCAGGTGTTCTGGAATC GTTTCCCCGCACGGCATGACGGTGCGGTACGCTGCCTTTCGTTGACTTAG TTTTCGATCCCTTCCTGCTCCGTCAGCAACGGTGTAGTTGAGAAATGAAT CTAGTAAATTAAACTTCACCTAACAACCTTCCCATCCCGATGGAATAATC TCCAACTGCCCCCGCACAGCGCGGGCGCCTCCTTCTCGGCCGACAAGGAG TACCGCGTCCGCATCAAACTACGAGTGGAAGAAGTGGATGAGAACGCACC CCCGACGGGGCAAGAGGAGAAGGAGAGGGAGGAAGAGGAGGAGGTCGTCG GCAACGACCCGCGGTCGGCGCAAACCCTGGTAGCCCTGGAGGTCATCGCG GCTCTCTGCGAATGTCCTGCAGGAATTAAGGGGGGGTGCTCCCACGCCGC CATGGCGCTGTTTTTAGGTAGACTGCTCCAGATGTCTGAAGAACAGTTAG CCACGTTCAATCCTACCACGTGTACGGGAATGGCATGCCGCTGGATAATG CAGCATTGTAAGGGTTCTCGATCGGCAAAACAGTGCGACCTATACGGGAT GAGTATGTCGGAAGGAACCACGGTAGTCCGGAGTGTAAGGGACCCGAAAG GGAATGTAGGGTGGGACGACGACAAACAAGTCCACGCGAGTGGGGTTCCA CCCATAGATCGAATGAACCAATTCAACCCGCATCCTACCGGGGGGATGTG GGCCGAACGCAAAGTGCACTTCGATGCTGGCGAGAACATCAGCAAACTCA AGAGGGACAAATTAATGGCGTTCGTGAATCACGAGAGGCGATCGGACCAC CAAGAGGTGTGCCTGGATTATCTACCGCCAAGAGTACGCGAAGATAGCAA TTCTGCACACTCTGCCTAGCACCGCTTTGAAATGTGCTTGCGTGTGCACT CGCGGAGTGATTCTGTGTGTGTGGCAGGGGGGGGGGTAGTGGGTTGCTGT GATAGTCACGAACCAAGCTGGAGCGTCTTTCTCTCTTGCCCGTAGGGGGA CTTGATGGAGGAGTGCGGTACAGGAGGAGGGATGGGGGGGGGGTGTGGGG GTGTACATTTTTTCGAAGGATATAGGCTAATTTTGCACCTGGGCCTGCCT GGGGATACAACATGATTATTTCCGGTACGAAGTATGTGTTGCTCTCGCCC TGAAACAATTCGACACCGATTATACGCTGTGATGCGAATATGTCGATGCC TTCAATAAAATGTAACAGCGGTTGCACTCCTTCACCCCCTCCATTTTCGC ACTGTGTCGCGCGGG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9274:2150..5714+

>mRNA_E_fasciculatus_S2_contig9274.17328.1 ID=mRNA_E_fasciculatus_S2_contig9274.17328.1|Name=mRNA_E_fasciculatus_S2_contig9274.17328.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1335bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9274:2150..5714+ (Ectocarpus fasciculatus EfasUO2)
ATGATCGTAGGCAACCACCGACTTCGCGAAATTCAAAAATGTTGGACCTG
TTACTGCGGCAAGGCTTTCGTTGACTCCGAGAGCGGTGTCTGGGCGGCAT
CTTTGCTGCCATTCGATGCGGTAGTGGGAGACCTGGCCGCAAGTCTGCTG
GTGGAGTCCAGGGAGGAGGACACGCCTGCTGCGCGGCGTGAGGTTGAGAT
CCGCCTGCGCGCCTGCCACACCATGTTTACACAGCCCGTGGTGTGGAACC
CGCTGAGCGGCGAACTCCAACATTTTTCCGGCGCGCCGACCAGCGAGGAC
ATCACCCGCCATACAGGGACATTGGAGCTATCCCCGCTGGCGTCCGGCGT
GGCCCGGGGAGATGTCTGTCCGCTGACCGGGCGCGAATGGGACCCACCGC
TGGGTACAGCACAGGCGAAGGGGCAGGCGGGAGGCGAGGATGGTGGCAGG
CAGAAGAAAAGGGCAACACCCGAGACGCCTAGCAGTCGCCCCCCGAATGC
TAGTAGCAGGACTTCTCGCCCTCGAGGTCCTCAAGACACAAATAACTACC
GCGAGCACGGCTTCAGCAGACTCCCTGGGGAGACTGAAGATTACACCAAG
TGGACCGTGCCTAAGCTTCGCGAGTTTCTACAAGTCGCGGGCGCCTCCTT
CTCGGCCGACAAGGAGTACCGCGTCCGCATCAAACTACGAGTGGAAGAAG
TGGATGAGAACGCACCCCCGACGGGGCAAGAGGAGAAGGAGAGGGAGGAA
GAGGAGGAGGTCGTCGGCAACGACCCGCGGTCGGCGCAAACCCTGGTAGC
CCTGGAGGTCATCGCGGCTCTCTGCGAATGTCCTGCAGGAATTAAGGGGG
GGTGCTCCCACGCCGCCATGGCGCTGTTTTTAGGTAGACTGCTCCAGATG
TCTGAAGAACAGTTAGCCACGTTCAATCCTACCACGTGTACGGGAATGGC
ATGCCGCTGGATAATGCAGCATTGTAAGGGTTCTCGATCGGCAAAACAGT
GCGACCTATACGGGATGAGTATGTCGGAAGGAACCACGGTAGTCCGGAGT
GTAAGGGACCCGAAAGGGAATGTAGGGTGGGACGACGACAAACAAGTCCA
CGCGAGTGGGGTTCCACCCATAGATCGAATGAACCAATTCAACCCGCATC
CTACCGGGGGGATGTGGGCCGAACGCAAAGTGCACTTCGATGCTGGCGAG
AACATCAGCAAACTCAAGAGGGACAAATTAATGGCGTTCGTGAATCACGA
GAGGCGATCGGACCACCAAGAGGTGTGCCTGGATTATCTACCGCCAAGAG
TACGCGAAGATAGCAATTCTGCACACTCTGCCTAG
back to top