mRNA_E_fasciculatus_S2_contig920.17265.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Ankyrin (repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 552 bits (1423), Expect = 5.820e-196 Identity = 302/362 (83.43%), Postives = 308/362 (85.08%), Query Frame = 1
Query: 1 MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDVALIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLLAASARPTPTAVTTRSAARRGTRVWGIDGGGGSRSTAGAATSPGYFEGQVLTTDHLRNNHHQLKANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGS-SGSVCPPGKGQPSNNKKRPRGVAKRRAGKRGRGGAESEEELAGRQALASLVTRLIGLGEEGAFRCVVSFL 1083
MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAED+ LIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLL SARP PT VTTRSAARRG RVW ID GGGSRS AGAATSPG+FEGQ LTT H+RN HHQLK + K S SGS CPPGKG S+NKKRPRG AKRR GKRGRGGAESEEELAGRQALASLV RLIGLGEEGAFRCV+SFL
Sbjct: 1 MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDIVLIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLLP-SARPPPTTVTTRSAARRGARVWAID-GGGSRSIAGAATSPGFFEGQGLTTGHIRN-HHQLKVHGKKKSFGAPGVTVAGSRGGGGKAPRSRRSPSAGGSSGSGSFCPPGKGHVSSNKKRPRGAAKRRVGKRGRGGAESEEELAGRQALASLVARLIGLGEEGAFRCVLSFL 359
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Ankyrin (repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 2.100e-17 Identity = 75/196 (38.27%), Postives = 100/196 (51.02%), Query Frame = 1
Query: 19 LHRAAQRGDIGAVRALVQA----VDVNLRGGWRVESPLHAASR-----AGKPDVIACLVGAGAHTEVRDRNND--TPLLLAA--WLGHATAIAKLLASGARVDA----DGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSES----LERAEDVALIREMLRRAPADRAWRRRGWLVMLRN 543
L AA RG ++AL+ VD GW + LH + K D + L+GAGA V+ N+ TPL LA W+ I LL GA ++A D P LH AC + + V LLR GADE + + DG++PA V+G + ++ ER D I ML RAPADR+WRRRGWLV+ R+
Sbjct: 249 LEIAAGRGHADVLKALLDKRSSEVDTANDLGW---AALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTP---LHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 7.130e-17 Identity = 85/222 (38.29%), Postives = 112/222 (50.45%), Query Frame = 1
Query: 19 LHRAAQRGDIGAVRALVQ-AVDVNLR-GGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRS-----ALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLE---RAEDVALIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLLAASARPTPTAVTTRSAARRGTRVWGIDG 654
L AAQ+GD +RA++Q VDVN R G+ + LH A+ + I LV AGAH EV D ++ TP L A A L G+ ++A I A A QG A V LLR GADET + DG + A+V+G E +DV +R++L AP DRAWRRRG+LV+ R A L AAS+ + RS + G R+ G G
Sbjct: 111 LDLAAQKGDACVLRAILQHGVDVNRRTDGY---TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRSLST-GARISGAGG 328
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Similar (to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY50_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.830e-16 Identity = 64/147 (43.54%), Postives = 80/147 (54.42%), Query Frame = 1
Query: 112 SPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVD-ADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDVA-LIREMLRRAPADRAWRRRGWLVMLRNR 546
S + A G DV+ ++ A H + D + L +AA GHA A+ L+ +GA VD A+ + LH ACM ACV LLR ADE +ED P V+G +R E+V I EML RAPADR WRRRGWL MLR R
Sbjct: 206 SAVDLAVERGTTDVLLEILAARPHVDALDDRGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEVFRNEDLAFPDDVVGHAVAGDKRDEEVVEWIYEMLARAPADRVWRRRGWLAMLRAR 352
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 6.710e-16 Identity = 73/181 (40.33%), Postives = 96/181 (53.04%), Query Frame = 1
Query: 28 AAQRGDIGAVRALVQ-AVDVNLR-GGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRS-----ALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLE---RAEDVALIREMLRRAPADRAWRRRGWLVMLR 540
AAQ+GD +RA++Q VDVN R G+ + LH A+ + I LV AGAH EV D ++ TP L A A L GA ++A + A A QG A V LLR GADET + DG + A+V+G E +D+ +R++L APADRAWRRRG LV+ R
Sbjct: 163 AAQKGDACVLRAILQHGVDVNRRTDGY---TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCR 340
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.090e-13 Identity = 64/183 (34.97%), Postives = 88/183 (48.09%), Query Frame = 1
Query: 7 DRTHLHRAAQRGDIGAVRALV-QAVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPR--SALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERA-----EDVALIREMLRRAPADRAWRRRGWLV 531
+ THL A +R + + AL+ + DVN R H A+ + L AG + E R TPL AA+ G A+ LL GA V++ S L AC +GH LLR GADET D D + ++ M+ + RA + + + E+L RAP DRAWRRRG+LV
Sbjct: 58 EETHLLLAVKRNHVAIINALLAEGADVNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKT---IVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLV 237
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 1.560e-12 Identity = 58/133 (43.61%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 169 GAGAHTEV-RDRNNDTPLLLAAW--LGHATAIAKLLASGARVDADGIPRSA-LHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDVAL----IREMLRRAPADRAWRRRGWLVMLRN 543
G G + E RD TPL A + LL GA +A G LH ACM + A V LLR GADET +++G+ PA VIG EDV IR ML RAPADR+WRRRGWLV+ R+
Sbjct: 303 GGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRS 435
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.880e-12 Identity = 69/190 (36.32%), Postives = 98/190 (51.58%), Query Frame = 1
Query: 28 AAQRGDIGAVRALVQ-AVDVNLRG----GWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNN----DTPLLLAAWLGHATAIAKLLASGA---RVDADGIPRSALHCACMQ---GHAACVSELLRGGADETVEDEDGNSPAQVIGTMS-ESLERAEDVALIREMLRRAPADRAWRRRGWLVMLRNRD 549
A Q G +G ++A ++ VD + + GW + LH A+ + + + L+ AGA +V DTPLL AA A+ LL +GA + D +G LH A + G V LLR GA ET ++ GN+PA+V ++ + E+ A +L RAPADRAWRRRGW+VMLR R
Sbjct: 174 ATQLGHVGVIKAFLEHGVDASSQACPASGW---TALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNG--SMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARS 358
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: EsV-1-21 (n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K) HSP 1 Score: 78.2 bits (191), Expect = 3.880e-12 Identity = 67/186 (36.02%), Postives = 90/186 (48.39%), Query Frame = 1
Query: 13 THLHRAAQRGDIGAVRALVQ---AVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADG--IPRSALHCACMQ--GHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDVALIREMLRRAPADRAWRRRGWLVMLRNRD 549
T LH AA G V L+ +D + + + +PL ++ V A L+ AGA+ D+ ++ L +W LL GA V+A G SALH A A V LLR GADETV D+ G +P V + + AE +R++L APADR WRRRGWLVML R+
Sbjct: 298 TALHAAASGGHNDVVNYLLDNSVRIDPDDKN---MMTPLMWSAMKNHLCVSATLLEAGANASAEDQMGESSLSSDSWSCSVDMALLLLRYGADVNASGGLFGSSALHNAIKNRDNTEAMVDLLLRWGADETVVDDRGRTPLDVFTSGTRFQRTAETKERVRKLLVNAPADRTWRRRGWLVMLWERE 480
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 6.070e-12 Identity = 65/162 (40.12%), Postives = 81/162 (50.00%), Query Frame = 1
Query: 112 SPLHAASRAGKPDVIACLVGAGAHTEVRDRN-------------NDTPLLLAAWLGHATAIAKLLASG-ARVDA-DGIPRSALHCACMQGH----AACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDVALIREMLRRAPADRAWRRRGWLVMLR 540
S LH A R G+ DV+ L+ GA E R TPL AA+ G+ + LL G A +A D S LH CM AAC LLR GADET DED ++PA ++ + SE ++++L APADRAWRRRG LVMLR
Sbjct: 196 SALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMAS-SEGHN-----GWLQQLLANAPADRAWRRRGTLVMLR 351 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig920.17265.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig920.17265.1 >prot_E_fasciculatus_S2_contig920.17265.1 ID=prot_E_fasciculatus_S2_contig920.17265.1|Name=mRNA_E_fasciculatus_S2_contig920.17265.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=362bp MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGKPDback to top mRNA from alignment at E_fasciculatus_S2_contig920:20137..21222- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig920.17265.1 ID=mRNA_E_fasciculatus_S2_contig920.17265.1|Name=mRNA_E_fasciculatus_S2_contig920.17265.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1086bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig920:20137..21222- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig920:20137..21222- >mRNA_E_fasciculatus_S2_contig920.17265.1 ID=mRNA_E_fasciculatus_S2_contig920.17265.1|Name=mRNA_E_fasciculatus_S2_contig920.17265.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1086bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig920:20137..21222- (Ectocarpus fasciculatus EfasUO2)back to top |