mRNA_E_fasciculatus_S2_contig8838.16933.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB6_ECTSI) HSP 1 Score: 249 bits (635), Expect = 1.780e-72 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 3
Query: 3 MVGVPEGDVKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYA 368
MVGVPE DVKWT VREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFL ELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALK+YDDVWPPYA
Sbjct: 265 MVGVPEDDVKWTAVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLAELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKVYDDVWPPYA 386
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J4_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.900e-33 Identity = 72/174 (41.38%), Postives = 104/174 (59.77%), Query Frame = 3
Query: 15 PEGDVKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVLPG-AK---GPWVPLLELQERLEDVMPT 524
P V+W+ REVL+CYEAHG+ LP ++S+ + V DYT WMW +WF E RLS+G ++E + + ++ S PKL++FSGHDSTLVP+L L +YD WP Y+S+++ +VAE G + L RVV+N L G AK G WV +L+ L+ +P+
Sbjct: 1 PRDGVRWSEAREVLACYEAHGLPLPR-SVSTMFISDVSDYTAWMWSKWFSDPEAGRLSIGRLVEECIQKLDGALQDS--------SEPKLSLFSGHDSTLVPLLAVLGVYDGAWPGYSSFVSFEVAEGPDG-KVLARVVYNNEAQALSGIAKEDPGHWVSWEDLKAGLQKWIPS 164
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8KKC2_HEMAN) HSP 1 Score: 112 bits (281), Expect = 1.020e-22 Identity = 61/169 (36.09%), Postives = 97/169 (57.40%), Query Frame = 3
Query: 9 GVPEGDVKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVLPGAKGPW-VPLLELQERLED 512
G P +V + EV C+ +HG+ +P G + + +V V DY W++G+ E++RL +GP L ++ G AG + P + +FSGHDSTL+P+L AL YDD+WPPYAS+++L++ DE +VR ++NG L G+K +P +E+L+D
Sbjct: 284 GAPLTNVSFIRASEVSICHRSHGLPMPGG-LPAAVVRDVTDYNAWIYGQRGASVEISRLGIGPLLSDI-------GGGFDAASAGREA-PLMRVFSGHDSTLMPLLVALGGYDDLWPPYASHVSLELLYDEGRDRHVVRCIYNGAAIGLFGSKDTSPIPYTLFKEKLKD 443
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Hypothetical (protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H2A6_9EUKA) HSP 1 Score: 109 bits (272), Expect = 2.010e-21 Identity = 54/150 (36.00%), Postives = 87/150 (58.00%), Query Frame = 3
Query: 6 VGVPEGDVKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVL 455
+G P G ++W REVL+CY G LP +++ ++ + + G++WG F +ARLS G E+ + E + + K++++SGHDSTLVP+L AL +Y+ WPPYASYI +++AE + G+ VRV +N E ++
Sbjct: 325 LGYPSGGIRWAQAREVLTCYLLQGRELPNN-LTADDIDAIGEVNGFIWGAQFTDSTVARLSTGRLFAEVFS-----DFELAIDDPD--DCNKMSLYSGHDSTLVPLLAALGVYEGQWPPYASYIVIELAESTKTGDHWVRVQYNNEELLM 466
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Hypothetical (protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7Y7_9EUKA) HSP 1 Score: 106 bits (265), Expect = 8.010e-21 Identity = 55/150 (36.67%), Postives = 93/150 (62.00%), Query Frame = 3
Query: 6 VGVPEGDVKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVL 455
+G P VKW REV++CY G LP ++ ++ + D G++WG + +++ARLS+G + E++ + + + P+ + K+A+++GHDSTLVPIL+AL +YD+ WP YA+ I ++AE+ + GE VRV++N E +L
Sbjct: 227 LGYPPKQVKWAQAREVMTCYLLQGKPLPNN-LTEHDIDRLGDINGFIWGAQYGDQDIARLSVGRIMAEVVDDMASAMDD---PD----DSYKIAMYAGHDSTLVPILSALGVYDNKWPSYAANIVFELAEEVKTGEMYVRVLYNNEEMLL 368
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Histidine (acid phosphatase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JJC4_GUITC) HSP 1 Score: 103 bits (257), Expect = 7.210e-20 Identity = 50/151 (33.11%), Postives = 87/151 (57.62%), Query Frame = 3
Query: 33 WTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVLPGAKGPWVPL 485
W + +V C+ +HG+ +P G ++ ++ ++DY WMW E+++L++G FL ++L E AG P KL +FSGHDSTL P+L AL +D+ WPPYAS + L++ + + G VR+++N + + G+ ++P+
Sbjct: 264 WIHLADVCHCHRSHGMDVPFG-LTPNEIDSLMDYNTWMWSTRMNTPELSKLAIGGFLQDIL-------RELKATVAGTPRA-KLLVFSGHDSTLFPLLKALDAFDEKWPPYASRVQLELLREVETGTFYVRLLYNNQLRHMLGSSDEFLPI 405
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: lysophosphatidic (acid phosphatase type 6 n=1 Tax=Cyprinodon tularosa TaxID=77115 RepID=UPI0018E23CBF) HSP 1 Score: 87.4 bits (215), Expect = 3.320e-15 Identity = 53/162 (32.72%), Postives = 89/162 (54.94%), Query Frame = 3
Query: 27 VKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFE--QREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVLPGAKGPWVPLLELQERL 506
V + +R+ + E HG+ +P + + V D M R +E + E +LS+G L LL + E + ++ + KL ++S HD+TL+P L AL+IYD WPPYA+ ITL++ + Q G+ V+V + G++ ++PG G + PL E ++ L
Sbjct: 119 VDFILIRDDMVARETHGLPIPP--VLNSWRNTVEDRAVDMMCRLYEPSKSEKLQLSVGSLLHLLLDNI-----EKKLQDSSAEANRKLFLYSAHDTTLIPCLMALEIYDMKWPPYAADITLELHQHRQTGDAFVKVSYIGQDQLIPGCSGVYCPLQEFKQLL 273
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Acid (phosphatase 6, lysophosphatidic n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3XD35_MOLML) HSP 1 Score: 88.6 bits (218), Expect = 5.960e-15 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 3
Query: 24 DVKWTTVREVLSCYEAHGVALPAGAIS--SGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVLPGAKGPWVPLLELQERL 506
++ + +R+ + EAHG+ P S + + VD +++ +RE +L +GP L LL + E + A + KL ++SGHD+TL+P L AL I+D WPPYA+ ITL+V + Q + V+V + G++ ++PG G + PL E +E L
Sbjct: 247 NIDFILIRDDMVAREAHGLPCPPVLDSWRRTVEQRAVDTMCYLYST--NKRETLQLCVGPLLHTLLCNI-----EEKLQGASSEANRKLYLYSGHDTTLIPCLMALGIFDMRWPPYAADITLEVHQHRQTKKAFVKVSYIGQDQLIPGCSGVYCPLEEFKEAL 402
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: lysophosphatidic (acid phosphatase type 6 isoform X1 n=2 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001470CCB2) HSP 1 Score: 88.2 bits (217), Expect = 9.040e-15 Identity = 57/187 (30.48%), Postives = 100/187 (53.48%), Query Frame = 3
Query: 27 VKWTTVREVLSCYEAHGVALPA--GAISSGLVEGVVDYTGWMWGRWFEQREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVLPGAKGPWVPLLELQERLEDVMPTAEDAIDSDLDDATTGSSEI 581
V +T +R+ + + HG+ P + + VD T +++ R++ +LS+GP LD L + E + A KL ++S HD+TL+P L A+ ++D WPPYA+ +T+++ + +Q E V+V + G++ +LPG G + PL E ++ L T E+ L D+T GSS++
Sbjct: 266 VDFTLIRDDMVARKTHGLPCPEVLDTWRETVEQRAVDMTCYIFE--LSNRKVLQLSVGPLLDILRVNI-----EEKLQGASSQPNRKLFLYSVHDTTLIPCLMAMGVFDMRWPPYAADLTVELHQHQQTREAFVKVSYMGQDQILPGCSGIYCPLQEFKQVLSQYTVTLENY--RSLCDSTEGSSKL 443
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Match: Lysophosphatidic (acid phosphatase type 6-like n=4 Tax=Cyprinodon variegatus TaxID=28743 RepID=A0A3Q2E0Y9_CYPVA) HSP 1 Score: 87.0 bits (214), Expect = 1.850e-14 Identity = 53/162 (32.72%), Postives = 89/162 (54.94%), Query Frame = 3
Query: 27 VKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGRWFE--QREMARLSLGPFLDELLTLVGARGHETGVPEAGMPSTPKLAIFSGHDSTLVPILTALKIYDDVWPPYASYITLDVAEDEQGGERLVRVVFNGREAVLPGAKGPWVPLLELQERL 506
V + +R+ + E HG+ +P + + V D M R +E + E +LS+G L LL + E + ++ + KL ++S HD+TL+P L AL+IYD WPPYA+ ITL++ + Q G+ V+V + G++ ++PG G + PL E ++ L
Sbjct: 245 VDFILIRDDMVARETHGLPIPP--VLNSWRNKVEDRAVDMMCRLYEPSKSEKLQLSVGSLLHLLLDNI-----EKKLQDSSAEANRKLFLYSAHDTTLIPCLMALEIYDMKWPPYAADITLELHQHRQTGDAFVKVSYIGQDQLIPGCSGVYCPLQEFKKLL 399 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8838.16933.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8838.16933.1 >prot_E_fasciculatus_S2_contig8838.16933.1 ID=prot_E_fasciculatus_S2_contig8838.16933.1|Name=mRNA_E_fasciculatus_S2_contig8838.16933.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=205bp MVGVPEGDVKWTTVREVLSCYEAHGVALPAGAISSGLVEGVVDYTGWMWGback to top mRNA from alignment at E_fasciculatus_S2_contig8838:821..5838- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8838.16933.1 ID=mRNA_E_fasciculatus_S2_contig8838.16933.1|Name=mRNA_E_fasciculatus_S2_contig8838.16933.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5018bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8838:821..5838- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8838:821..5838- >mRNA_E_fasciculatus_S2_contig8838.16933.1 ID=mRNA_E_fasciculatus_S2_contig8838.16933.1|Name=mRNA_E_fasciculatus_S2_contig8838.16933.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=615bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8838:821..5838- (Ectocarpus fasciculatus EfasUO2)back to top |