mRNA_E_fasciculatus_S2_contig8679.16789.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 1091 bits (2821), Expect = 0.000e+0 Identity = 602/847 (71.07%), Postives = 668/847 (78.87%), Query Frame = 1
Query: 1 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEMGSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEGADADLACFLLHT---------------VVSKFIQDKAEHALKGKSNRS-DTESTTTTEMDHMRDGVQAFPLGGSLAQRSGPSKSSAEPLVLHDHVFKVSLDPKSVLELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVLKERRPCVLWSEAVENFRNLMSGSLP---DAGKVLLRAMQHREAEGGVLLSLADPSAPVAADMLHLDPSWLIELVRRLVDHNLVDE--KKQGTLEQELRRYARQQHLHAGPLFDMHNVYCKSGRLNRAYLRFLWMHRKTEAPGTAVRLTNPEFQTIVSTMIRLFVMYTARDADDLVVPARLPEYGDQRVLAADTISDIVMTMQCSFGHVYPPPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYESCFEEPHVDGTVSMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNLGNAADRVEVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQELFGASDEHSREYPRLVLVRPELETKDGGTHERIQHAGWDRWMKNLNDVGFHHKFRLHFLCEHDLSEVPCGPDGRGFPIDHLKDWVKQCLPLMQASLWMLRVAVGTVSNVDLPLNEVLGAFVQATGAELLNSMSKVADTINSGSLPVFGEGATEAETKRFIHLRGKAYKALCEFMRQKELSPPQRISGCFPCGCP-TIVNWRDSMVQVG------QAWVLKTNEEAYRRQHAGAPAAAQAPAS 2457
GQADYYSSHQLFLTKGALFLLVVDLHAFSKE+GSGVDNFTDP RRIYWWLEMLHMRVPGAA+ALVGSHVD ME E DA A LHT VVSKFI+DKA +A + +S R D EST E+DH+RD G +A RSG S+ +AEPLVLH +VFKVSL P SV+ELRQWIVKAASGR P+GF+FPAVDQTV KAWIEAY+AMDVLK PCVLWS AVE FR MSG P DAGKVLLRAMQHREAEGGVLLSLAD SAPVA+DMLHLDPSWLIELVRRL DHNLVD+ KK+G+LEQ LR YA++Q L A PLFD+HNVYC+SGRLNRAYLRFLWMHRK E PG V LT+PEF++IVSTM RL VMYTARDAD+LVVPARL EYGDQR+ D ++++V+ ++CSFG VYPPPGIVGRFLAWSAQ VA Y +CWQHGAFFSYKYQYARYDVFLYES EE H DGTV MFAGLTLGIQGPPP AAE+L EL+ SLE+LVSDSA+ YPGL G MYFRPA++I+SS L+ LG+ D XXXXXXXXXXXXXXXXX ET RKLGGIV QLLEQ+L ASDE S YPRLVLVRPELET + THERIQ AGWDRW K L+++GFH KFR+HFLC HDLSEVPCGP GRGFPI H KDWVKQ LPLMQ SLWMLRVAVG VSNVDLPLN+VLGAFV ATGAELL + KV D I+S +LPVF EGAT AE F LRGK+Y+ LC+FMR E SPPQ +SGC PC +V+WRD MVQV +AWVLKTNE+A+ R+H GAPA A AP S
Sbjct: 340 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQMESE--DARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRD-------DGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLKGTAPCVLWSRAVEEFRRKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEGPGPTVDLTDPEFESIVSTMERLLVMYTARDADNLVVPARLQEYGDQRI--PDRLTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGLVGPMYFRPAEEIESSLLV-------RLGSVLDXXXXXXXXXXXXXXXXXXXXXSLEETVRKLGGIVTQLLEQDLLPASDEQSA-YPRLVLVRPELETAEDMTHERIQRAGWDRWTKALSEMGFH-KFRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVGKVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDVESSPPQCLSGCLPCHRTLAVVDWRDHMVQVRNPSTGRRAWVLKTNEKAFLREHGGAPATAGAPVS 1166
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 348 bits (893), Expect = 3.830e-96 Identity = 246/715 (34.41%), Postives = 350/715 (48.95%), Query Frame = 1
Query: 427 KSSAEPLVLHDHVFKVSLD-PKSVLELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVLKERR--PCVLWSEAVENFRNLMSGSLPDAGKV--------------LLRAMQHREAEGGVLLSLADPSAPVAADMLHLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRRYARQQHLHAGP---LFDMHNVYCKSGRLNRAYLRFLWMHRKTEAPG--TAVRLTNPEFQTIVSTMIRLFVMYTAR----DADDL-VVPARLPEYGDQRVLAADT-ISDIVMTMQCSFGHVYPPPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYESCFEEPHVDGTVSMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNLGNAADRVEVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQE--LFGAS-----DEHSREYPRLVLVRPELETKDGGTHERIQHAG-------WDRWMKNLNDVGFHHKFRLHFLCEHDLSEVPCGPDGRGFPIDHLKDWVKQCLPLMQASLWMLRVAVGTVSNVDLPLNEVLGAFVQATGAELLNSMSKVADTINSGSLPVFGEGAT--EAETKRFIHLRGKAYKALCEFMRQKELSPPQ-RISGCFPCGCPTI-------VNWRDSMVQV----GQAWVLKTNEE 2403
+ S PL+LH VF SL + L WI+ A + F FPAV +P AW++A A++ L + + P VLW +AV F+ + GK L AM+HREAEGGV+LSL D S+P +DM+H+DP WLIELVRR+ DHNLVD+KKQ + QEL Y R + L + H + + GRLNR YLRFLW+HRK E G +L F ++V TMI+ +Y + +A+D +VPARLPE+G+ +L + ++V+ F + P GI+GRFLA+++ A KCWQHGA +K +DV L E+ E+ + G S F + + ++G A +L E+ L +L+ D+ YPGL L F +S Q A +L I+ + +F A+ D YPRLVL++P T T G WDRW+ +L G F L FLCE D SE+PCGP G+GF + + PL+Q +LW++++AVGTV++VDLPL++VL AF+ AT AE+L + F AT E + + F L G AYKALC+FM ++E P + R C P P + +WR M + G +WV K++E+
Sbjct: 1465 RGSTHPLILHPRVFCASLGLDNRIGRLSDWIIGVAPEK---ISFSFPAVATILPAAWVDAIAAVEALHKEKGTPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSDMIHVDPRWLIELVRRVTDHNLVDKKKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDAFDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEESIGLGEVVVGKTAWFLRSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPGQ-STFPAIAICVKGKTAEAKGVLREVGEQLLSLLQDNIHGYPGLR-LPIFEELNITQSDQF---------------------------------QVHFERYLATQLAKILEDTRRESVRMFRAAFPSYGDPVELPYPRLVLLKPVETTSIQETQAEESVNGAIQLRRTWDRWI-DLCRSGGSCDFVLVFLCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVDLPLHDVLEAFLHATAAEVLEAAPSQ-----------FSPSATLDEGQQEGFKELHGPAYKALCDFMTKEEFGPEEARCESCLPWYRPRVHEPIPSEFDWRSHMEMIKNGIGYSWVRKSSEQ 2129
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE) HSP 1 Score: 299 bits (766), Expect = 5.570e-85 Identity = 220/701 (31.38%), Postives = 334/701 (47.65%), Query Frame = 1
Query: 442 PLVLHDHVFKVSLD-PKSVLELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVLKERRPCVLWSEAVENFRNLMSG--------------SLPDAGKVLLRAMQHREAEGGVLLSLADPSAPVAADMLHLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRRYARQQHLHAGP---LFDMHNVYCKSGRLNRAYLRFLWMHRKTEAPG--TAVRLTNPEFQTIVSTMIRLFVMYTARDADD-----LVVPARLPEYGDQRVLAADT-ISDIVMTMQCSFGHVYPPPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYESCFEEPHVDGTVSMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNLGNAADRVEVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQELFGASDEHSREYPRLVLVRP-------ELETKDGGTHERIQHAGWDRWMKNLNDVGFHHKFRLHFLCEHDLSEVPCGPDGRGFPIDHLKDWVKQCLPLMQASLWMLRVAVGTVSNVDLPLNEVLGAFVQATGAELLNSMSKVADTINSGSLPVFGEGAT--EAETKRFIHLRGKAYKALCEFMRQKELSPPQ-RISGCFPCGCPTI-------VNWRDSMVQ----VGQAWVLKTNEE 2403
PL+LH VF+ SL V L WI+ ++ + F FPAV +P AW VLW +AV+ F+ S +A L AM+HREAEGGV+LSL + S+P +DM+H+DP WLI+LVRR+ DHNLVD+K + + +EL Y R + L + H + + GRLNR YLRFLW+HRK E G V+L N F ++V TMI+ +Y + +VPARLPE G VL + ++V+ F + P GI+G FLA+++ A +CWQHGA +K +D+ L E+ E+ + G ++ A + + ++G A +L E+ L +L+ D + + + A ++ ++ +R + + VE+ YPRLVL++P E + + ++++ WDRW+ +L G F L LCE D SE+PCGP G+GF + + PL+Q +LW++++AVGTV++V LPL++VL AF+ AT AE+L + F AT E + + F L G AYKALC+FMR++E P + + C P P + +WR M + VG +WV K++E+
Sbjct: 42 PLILHPRVFRASLGLDNRVNRLSDWIIDVSTEK---ISFSFPAVATILPSAW----------------VLWGDAVKAFQRYFQEKHKEEREDERNKPLSDEEASSNLKEAMKHREAEGGVILSLREESSPAQSDMIHVDPRWLIDLVRRVTDHNLVDKKNEHEILKELLEYGRTRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLEESIGLDEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGPGTLPA-IAICVKGKTAEAKGVLREVGEQLLSLLKDVIHVH--FERYLATKLATILEDTRRESVRMFRAAFPSYGEHVELL-----------------------------------------------YPRLVLLKPVETTSIQETQVESVSGAKKLRRT-WDRWI-DLCWSGGSCDFVLVILCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVYLPLHDVLEAFLHATAAEVLEAAPSQ-----------FSPSATLDEGQQEGFKELHGPAYKALCDFMRKEEFGPEEAQCCPCLPWHRPRVHEPILSEFDWRSHMYKIKNGVGYSWVRKSSEQ 660
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 214 bits (546), Expect = 1.130e-53 Identity = 214/832 (25.72%), Postives = 352/832 (42.31%), Query Frame = 1
Query: 1 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEMGSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEG-ADADLACFL---LHTVVSKFIQDKAEHALKGKSNRSDTESTTTTEMDHMRDGVQAFPLGGSLAQRSGPSKSSAEPL--VLHDHVFKVSLDPK---SVLELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVLK--------------------------ERRPCVLWSEAVENF------RNLMSGSLPDAGKVLLRAMQHREAEGGVLLSLADPSAPVAADM-------LHLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRRYARQQHLHAGPLFDMHNVYCKSGRLNRAYLRFLWMHRKTE----APGTA--VRLTNPEFQTIVSTMIRLFVMYTARDADD-LVVPARLPEYG----DQRVLAADTISDIVMTMQCSF-GHVYPPPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYESCFEEPHVDGTVSMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNL-GNAADRV-----EVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQL-----LEQELFGASDEHSREYPRLVLV-RPELETKDGGTHERIQHAGWDRWMKNLNDVGFHHKFRLHFLCEHDLSEVPCGPDGRGFPID--HLKDWVKQCLPLMQASLWMLRVAVGTVSNVD-LPLNEVLGAFVQATGAELLNSMSKVADTINSGSLPVFGEGATEAETKRFIHLRGKAYKALCEF 2271
GQ YY +HQ+FLT GALF+LVVD+ A+S++ S D WL++L RVPG+ + L+G+H D + + CF+ L + FI + K ++R GVQ EPL V+ + ++L P + ELR+ I A G G+ FP+V+ VP+ + A ++ ++ E P VL+ EA+ F + + G + +V L A++ E +G +LL+ AD + DM +H++P+W +L+RR+VD L+D Q E+ RQ G L H+ + +G LNR Y+RFLW R E +P TA + ++ + TIV +++ + M+ R +D +VP+ LP++ D + L + + + + F G PPG++ R LAW Q CW+ G FS+K + V LYE H D ++ +G A L ++ L LV D+ + +PG+ GL + K K S L ++ G +++ E+ E A + QL + E S E PRL++V ++ D + D+ H +R+ FLC +DLS CG DG G+ ++ K W+++ +P++Q +LW +RV V VS D LP+++V+G + G E + ++ D G + G+ + E R + G A+ L ++
Sbjct: 117 GQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDCFVKGELLPLYKNFIMKRIGDECKAAADRGHA-------------GVQ--------------DNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYG--VHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEME-DMASEEHLVIHMNPAWFADLIRRIVDVRLLD-PAQARQEKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNEDHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFK----EHLVLLYE------HRDAGRAVIECHAMG-SAHDEKAWRTLEDVVTELGQLVGDAKYGFPGV-GLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSAEKDIPCPRLIMVSEDDVPESDQSRLSHFRREMMDQLFLGKGQTPQH--YRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVMGKLREVAGEEAATMIGEI-DV--RGHCSLSGQDLVQ-EVDRKAEVFGSAFNKLADW 892
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 205 bits (522), Expect = 2.930e-50 Identity = 213/852 (25.00%), Postives = 372/852 (43.66%), Query Frame = 1
Query: 1 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEMGSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEGADADLACFLLHTVVSKFIQDKAEHALKGKSNRSDTESTTTTEMDHMRDGVQAFPLGGSLAQRSGPSKSSAEPLVLHDHVFKVSLDPK---SVLELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVLK-------------------------ERRPCVLWSEAVENF------RNLMSGSLPDAGKVLLRAMQHREAEGGVLLSLADPSA------PVAAD--MLHLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRRYARQQHLHAGPLFDMHNVYCKSGRLNRAYLRFLWMHRKTEAPGTAVRLTNPEFQ-------TIVSTMIRLFVMYTAR-DADDLVVPARLPEYG----DQRVLAADTISDIVMTMQCSFGHVYP-PPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYESCFE------EPHVDGTV-SMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGL---------------AG---LMYFRPAKKIKSSQLLGLRAVVDNLGNAADRVE--VXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQELFGASDEHSREYPRLVLVRPELETKDGGTHERIQHAGWDRWMKNLNDVG---FHHKFRLHFLCEHDLSEVPCGPDGRGFPID--HLKDWVKQCLPLMQASLWMLRVAVGTVSNVD-LPLNEVLGAFVQATGAELLNSMSKV--ADTINSGSLPVFGEGATEAETKRFIHLRGKAYKALCEFMRQKE 2286
GQ YY +HQ+FLT GALF+LVVD+ A+S++ S D WL++L RVPG+ + LVG+H D + + AD + + I D+ K R+ ES ++ ++ GVQ ++R P + +V+ D + ++L P + +L++ A G G+ FP+V+ VP+ + A ++ ++ E +P +L+ EA+ F ++L G+ + + L A+ E +G +L++ AD P + ++H++P+W +L+RR+VD L+D +Q L + ++R Q L H + +G +++ Y++FLW R E + L P F+ T+V +++ + M+ R + D +VP+ LP++ D + L + + + + G P PPG++ R LAW +Q A CW+ G F++ ++ V LYE E E H G+ + AG TL +++AEL+ LV D + +PG+ AG + R A ++K + + + A VE + + +RKL I + + S E PRL++V ++ G R+ H D K L G +R+ FLC +DL+ CG DG G+ ++ ++W+K CLP+++ SLW+LRV + V+ D LP++ V+ + G E + ++ +SG V A E + G AY L ++++Q+E
Sbjct: 289 GQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLVGTHSDMFD---SPADCS--------KRDIMDRVGRECKSARERARQESAGNSDREYA--GVQD-------SRRYQPLR-----IVVVDELLALNLTPSGGVTTAQLQEHFEGVAYG--VHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKR---QSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNKDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRKHL---VLLYEHRKEAGRSVIECHAMGSAHNEKAGGTLD---------DVVAELR----RLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIA--AVTSKCLLVSVEKDIPCPRLIMVLEDV--SPGSALSRLSHFRRDMVDKLLRREGEGPAPQCYRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGEEAAGILGEIDLEGRRSSGQDLVDKVNAQE-------QVFGTAYAELAKWVQQRE 1076
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 172 bits (435), Expect = 9.870e-40 Identity = 211/860 (24.53%), Postives = 358/860 (41.63%), Query Frame = 1
Query: 1 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEMGSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEGADADLACFLLHTVVSKFIQDKAEHALKGKSNRSDTESTTTT---EMDHMRDGVQAFPLGGSLAQRSGPSKSSAEPLVLHDHVFKVSLDPKSV--LELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVL-------------------------KERRPCVLWSEAVENFR-------NLMSGSLPDAG---KVLLRAMQHREAEGGVLLSLADP-------------SAPVAADML-HLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRRYARQQHLHAGPLFDMHNVYCKSGRLNRAYLRFLWMH------RKTEAPGTAVRLTNPEFQTIVSTMIRLFVMYTARDADDLVVPAR------LPEYGDQ-----RVLAADTISDIVMTMQCSFGHVYPPPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYESCFEEPHVDGTVSMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNLGNAA-DRVEVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQELFGASDEHSREYPRLVLVRPELETKDGGTHERIQHAGWDRWMKNLND---------VGFH-HKFRLHFLCEHDLSEVPCGPDGRGFPIDHLKDWVKQCLPLMQASLWM----LRVAVG-TVSNVDLP--LNEVLGAFVQATGAELLNS-----MSKVADTINSG---SLPVFGEGATEAETKRFIHLRGKAYKALCEFMRQKEL 2289
GQ YY +HQ+FLT GALF+LVVD+ +++ G ++ + WLE+L RVPG+ + LVG+H D F ++ AE + + D E T E D +D V+ G G + +VL + + + L ++L Q ++ + G+ G+ FP+V VP+ ++ A ++ + K+RR V +SEAV F + +S AG ++ L A++ EA G +LL+ D +A AAD++ H++PS +LVRR+VD LVD ++Q +E+ + + + L D H + K+G +++ YL+FLW+ EAP + ++ + + +V +++ + MY RD VP R LP ++L S I G PPG+V R LAW + + CW+ G F++K + V LYE +DGT S G +A L ++ + L++D + +PGL GL+ +++ S +A+++ + + D++ V ++++ + Q++ PRLV V P E++ E+ + +++W L + GF K R+ FLC +D S CGP G+G+ + L W K+ +P + + LRV +G + VD L V G + E LNS S + ++ G LP G GA A+ ++G Y+ L E ++ E+
Sbjct: 424 GQRAYYDTHQMFLTPGALFVLVVDMFTYTE--GQSREDALEQ------WLEILQARVPGSVVLLVGTHTD---------------------LFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETELGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGY-DGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPMLL-TLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAP--PLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFK----NHLVLLYEV----RAIDGT-SWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGL-GLVRSGESEETVISSDSDHKALLERIVDVLRDQMNVKF--------------------------MMDRSMRQDVAFLR----WPIPRLVCVLPAPESRAKPLEEKDR--SFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERLDGGRAEGLPQ-GAGAHGAQQGWPSPVQGFTYETLKEVIKSFEV 1207
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: hypothetical (protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E5A) HSP 1 Score: 157 bits (396), Expect = 2.000e-38 Identity = 125/263 (47.53%), Postives = 139/263 (52.85%), Query Frame = 3
Query: 2478 MSDGRGDLLDDLFLVDSG-----------SLGMPEAFGTTAEDTAIPGPSFDHVFDIDFLLAFDDXXXXXXXXXAMPREPSSLAVAGSG*A--------------------GSSGAATAPGDVTXXXXVAAHGGQRVAEKPSSLLAAGLGVAGGGADGDNQT---------SSSSHGFLDDDTEKDVVHTSDGNMSVSDGGWCFIVGSNDGEGSETSESSYAPSSDSSSTSPDDVP----EMSIVSCKEQ-DDEAPCMDKPIG 3131
M DG DLLD +DSG +L PEAFGTTAEDTA+PGP F VFD D D AM +PSSLAV G A +S TA G+ AAH GQ VAEKPSSL+AAG G AGGGA S +S GF+DDDTEKDVVHTSDGNM SDG W I+GS DGEG + S SS PSSDS EMSIVSC+EQ DDE PC++KPIG
Sbjct: 1 MDDGCKDLLDLFLDIDSGCDFGLASQSLGNLDTPEAFGTTAEDTAMPGP-FSDVFDFD-----DMSGSGHDGGGAMSHQPSSLAVTGGSGAVXXXXXXXXXXXXXXXXXXXKASDEVTASGEAD-----AAHWGQPVAEKPSSLVAAGFGAAGGGAXXXXXXXXXXXXXXXSQASCGFIDDDTEKDVVHTSDGNMGGSDGNWSSIIGSIDGEGPDASASSCIPSSDSXXXXXXXXXXXXSEMSIVSCQEQEDDEDPCIEKPIG 252
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.260e-35 Identity = 201/835 (24.07%), Postives = 340/835 (40.72%), Query Frame = 1
Query: 1 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEMGSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEGADADLACFLLHTVVSKFIQDKAEHALKGKSNRSDT-ESTTTTEMDHMRDGVQAFPLGGSLAQRSGPSKSSAEPLVLHDHVFKVSLDPKSV--LELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVLK-------------------------ERRPCVLWSEAVENFR------------NLMSGSL--------------------PDAGKVLLRAMQHREAEGGVLLSLADP-------------SAPVAADML-HLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRRYARQQHLHAGPLFDMHNVYCKSGRLNRAYLRFLWMH------RKTEAPGTAVRLTNPEFQTIVSTMIRLFVMYTARDADDLVVPARL-----------PEYGDQRVLAADTISDIVMTMQCSFGHVYPPPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYE------SCFEEPHVDGTVSMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNLGNAA-DRVEVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQELFGASDEHSREYPRLVLVRPELETKDGGTHERIQHAGWDRWMKNLND--VGFHHK--------FRLHFLCEHDLSEVPCGPDGRGFPIDHLKDWVKQCLPLMQASLWMLRVAVGTVSNVDLPLNEVLGAFVQATGAELLNSMSK-VADTINSG 2178
GQ YY +HQ+FLT+GALF+LVVD+ A+++ P + WL++L RVPGA + LVG+H D E + +F +D E +K S + D+ ++ TE+ ++ P L +VL + + + L + L Q ++ + G+ G+ F +V VP+ ++ ++ ++ +RR V +SEAV R NL + L + ++ L A++ EA G +LL+ D +A AAD++ H++PS +LVRR+VD LVD ++Q +EQ + + + L D H + K+G +++ YL+FLW+ EAP + ++ + +V +++ + MY RD D VP R PE ++L S + G PPG+V R LAW + + CW+ G F++K + V LYE + + E H G SMF +A L ++ + L++D + +PGL GL+ + + SS A+V + N D++ V ++++ ++Q+L PRLV V P E+ E+ + +D+W L + +G K RL FLC +D S CGP G+G+ + L W K+ +PL + L + A + + +P + F G + ++S V D++NSG
Sbjct: 129 GQRAYYDTHQMFLTQGALFVLVVDMFAYAEGHS--------PEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKR-------TDRFKKD-VEKIMKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLR------------VVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGY-DGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPMLL-TLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAP--PLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFK----NHMVLLYEVRDTAGNSWIECHARG--SMF----------DESARTALNDIGDQVNELINDRKYGFPGL-GLIRGESEEALVSSDG-DHEALVKRIVNMLRDQMNVKF--------------------------MMDRSIKQDLAFLR----WPIPRLVCVLPAPESGAKPLEEKDR--SFDKWSATLRNWCLGGKRKGKGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEAD----FEATLGTKAGGALSTFVEDSLNSG 877
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 141 bits (355), Expect = 3.060e-30 Identity = 196/860 (22.79%), Postives = 306/860 (35.58%), Query Frame = 1
Query: 1 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEM---GSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEGADADLACFLLHTVVSKFIQDKAEHALKGKSNRSDTESTTTTEMDHMRDGVQAFPLGGSLAQRSGPSKSSAEPLVLH----DHVFKVSLDPKSVLELRQWIVKAASGRGFPSGFHFPAVDQTVPKAWIEAYEAMDVL---------------------KERRPCVLWSEAVENFRNLMSGS---LPDAGKV--LLRAMQHREAEGGVLLSLADPSAPVAADMLHLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRRYARQQHLHAGPLFDMHNVYCKSGRLNRAYLRFLWMHRKTEAPGTAVRLTNPEFQTIVSTMIRLFVMYTARDA------DDLVVPARLPE--YGDQRVLAADTIS-DIVMTMQCSFGHVYPPPGIVGRFLAWSAQHVAA------YEKCWQHGAFFSYKYQYARY-----------------------DVFLYESCFEEPHVDGTVSMFAGLTLGIQGPP--------------PAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNLGNAADRVEVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQELFGASDEHSREYPRLVLVRPELETKDGGTHERIQHAGWDRWMKNL-------NDVG---FHHKFRLHFLCEHDLSEVPCGPDGRGFPIDHLKDWVKQCLPLMQASLWMLRVAVGTVSNVDLPLNEVLGAFVQATGAELLNSMSKVADTINSGSLPVFGEGATEAETKRFIHLRGKAYKALCEFMRQKELSP 2295
G DY+S+HQ+FLT GAL LLVVDLH F +++ G GV Y WL+ L RVPG+A+ +V +H D + + A L V++ ++ K + L K E + + G S +S P LH V SLD S + + W V FP+V + VP W + MD L +++ V +A E + + S L AG LR + R + + L S ++HL+PSW+ L+R ++DH L D + ++L+ Y R + + L + H + +G L +LRFLW + G ++ F +V TM M+ D + +VPARLP+ GD D +S M Y PP I+ +FL + + + CW G F + DVF ++ D + GL P ++ +L LE+++S+ A+ G + + A+++ S L R L V + GI+N L F P L+ V P E+ ER + ++ W L N +G K RL FLC D+S CGPDG+G+ + L W K+ PL + L + +AV + + +P ++ G L + + + V GE + +H G C R+K P
Sbjct: 247 GHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLSRGGGV----------YIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKR----------LEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPAV-------FPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDEWWWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLW---RDVLKGVDEKV----FARLVETMTAHDAMFPCNDGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLREAYPGLAFDSSAHPRFENGTEAWQDSLEALQKDLFDKLDQRLESVLSEFLEAFKGQSLSVNEAVARRLNSLCLDCQRDANFQLDAKVHEVVARVEQVVRASLSTTAVPKGGLNETER--GILNSLARNVAFLLWP-----IPSLMCVLPARESGAKPLDERDR--SFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHHAGA-----CRLEREKMRRP 1058
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 131 bits (330), Expect = 2.390e-27 Identity = 201/847 (23.73%), Postives = 343/847 (40.50%), Query Frame = 1
Query: 1 GQADYYSSHQLFLTKGALFLLVVDLHAFSKEMGSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEGADADLACFLLHTVVSKFIQDKAEHALKGKSNR------SDTESTTTT---EMDHMRDGVQAFPLGGSLAQRSGPSKSSAEPLVLHDHVFKVSL---DPKSVLELRQWIVKAASGRGFP---SGFHFPAVDQTVPKAWIEAYEAMDVLKERRPCVLWSEAVENFRNLMSGSL-----------PDAGKVLLRAMQHREAEGGVLLSLADP-------------SAPVAADML-HLDPSWLIELVRRLVDHNLVDEKKQGTLEQELRR--YARQQHLHAGPLFDMHNVYCKSGRLNRAYLRFLWMH----RKTEAPGTAVRLTNPEFQTIVSTMIRLFVMYTARDADDLVVPARL-----------PEYGDQRVLAADTISDIVMTMQCSFGHVYP-PPGIVGRFLAWSAQHVAAYEKCWQHGAFFSYKYQYARYDVFLYESCFEEPHVDGTVSMFAGLTLGIQGPPPAAAEILAELKASLENLVSDSAFAYPGLAGLMYFRPAKKIKSSQLLGLRAVVDNLGNAA-DRVEVXXXXXXXXXXXXXXXXXXXXETARKLGGIVNQLLEQELFGASDEHSREYPRLVLVRPELETKDGGTHERIQHAGWDRWMKNLND---------VGFH-HKFRLHFLCEHDLSEVPCGPDGRGFPIDHLKDWVKQCLPLMQASLWM----LRVAVG-TVSNVDLP--LNEVLGAFVQATGAELLNS-----MSKVADTINSG---SLPVFGEGATEAETKRFIHLRGKAYKALCEFMRQKEL 2289
GQ YY +HQ+FLT GALF+LVVD+ F+ E+G ++ + WLE+L RVPG+ + LVG+H D + A+ T + ++ + +N +D + T E D +D +A G G + +VL + + ++L D + + L+ + A G SG AV Q + + K+RR V +SEAV F GS+ + ++ L A++ EA G + L+ D +A AAD++ H++PS +LVRR+VD LV ++Q +E+ + R L L D H + K+G +++ YL+FLW+ R+ + ++ + + +VS+++ + MY RD VP R P+ ++L T + + + + V+ PPG+V R L S V YE G + + E H G V + T L ++ ++ L+SD +PGL GL+ +++ +A+++ + + D++ V KL ++++ + Q++ PRLV V P E+ G +++W L + GF K R+ FLC +D S CGP G+G+ + L +W K+ +P + L + LRV +G + VD L G + E L+S S D ++ G LP G G A+ + ++G Y+ L E ++ E+
Sbjct: 169 GQRAYYDTHQMFLTPGALFVLVVDM--FTYEVGQSKEDALEQ------WLEILQARVPGSIMLLVGTHTDLFKANAAEC--------TRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNGGADLRGSGSTREAVAQRLREG---------NPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRSSLL---TLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKT-GNAIYSQKLKLVRVHAVPPGLVPRLL--SCHLVLLYEVRATDG------------------TSWIECHARGNVFDESARTA------------LKDIGDQVDELISDHKNRFPGL-GLVRSGESEETVVYSDSDHKALLERIVDVQRDQMNV------------------------KL--MMDRSMRQDVAFLR----WPIPRLVCVLPAPES--GAKPLEEGDRSFEQWSATLRNWCLGGKRTGKGFATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHSGVESVASIAGDRLDGGRAEGLP-HGAGGHGAQQEWPSPMQGITYETLKEVIKSFEV 920 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8679.16789.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8679.16789.1 >prot_E_fasciculatus_S2_contig8679.16789.1 ID=prot_E_fasciculatus_S2_contig8679.16789.1|Name=mRNA_E_fasciculatus_S2_contig8679.16789.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=789bp MGSGVDNFTDPCRRIYWWLEMLHMRVPGAAIALVGSHVDGMEKEGADADLback to top mRNA from alignment at E_fasciculatus_S2_contig8679:1..4939+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8679.16789.1 ID=mRNA_E_fasciculatus_S2_contig8679.16789.1|Name=mRNA_E_fasciculatus_S2_contig8679.16789.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4939bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8679:1..4939+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8679:1..4939+ >mRNA_E_fasciculatus_S2_contig8679.16789.1 ID=mRNA_E_fasciculatus_S2_contig8679.16789.1|Name=mRNA_E_fasciculatus_S2_contig8679.16789.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2367bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8679:1..4939+ (Ectocarpus fasciculatus EfasUO2)back to top |