mRNA_E_fasciculatus_S2_contig867.16781.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX78_ECTSI) HSP 1 Score: 306 bits (783), Expect = 5.980e-99 Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 3
Query: 153 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQKSGSL 614
MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKH+VQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAG+EKGGSRAGHEYCGK+GLKALYEIAKVK+AEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQK G L
Sbjct: 1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGVEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQKGGGL 154
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Ribosomal (protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X1_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.340e-52 Identity = 87/146 (59.59%), Postives = 114/146 (78.08%), Query Frame = 3
Query: 153 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIVDDRES 590
MS VRTVRMRVPAG AKPGPAIGQALGPLGINMM+FCK FN +T+H++ +TP P L+A+++R+F F + TP T+W+LKRCA I+KG G E G +G KA+YEIAK+K+ + H LPL+ + +SV +TALSMGL+I DD ++
Sbjct: 1 MSLVRTVRMRVPAGMAKPGPAIGQALGPLGINMMDFCKSFNAKTQHLLPDTPTPVVLSAFSNRTFEFVIKTPPTSWLLKRCAKIDKGAKMPGLEIVGSVGTKAIYEIAKIKARDQHLDWLPLDGIARSVASTALSMGLKIRDDMKA 146
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHZ2_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.100e-50 Identity = 84/144 (58.33%), Postives = 110/144 (76.39%), Query Frame = 3
Query: 153 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIVDDR 584
MS VRTVR+RVPAG AKPGPAIGQALGPLGINMMEFCK FN+ T +V++TP+P LTAY +R+FTF +P TTW LK AG+EKG +R GHE G++ LK ++EIAK+K ++H +PL +C+S+ TA SMG+ ++ D+
Sbjct: 12 MSIVRTVRLRVPAGNAKPGPAIGQALGPLGINMMEFCKAFNDSTTKLVKDTPIPVLLTAYANRTFTFVNKSPPTTWFLKNAAGLEKGTTRPGHEMVGEVTLKQVFEIAKIKQQDEHLAHVPLRGLCRSIVGTAGSMGITVISDQ 155
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT6_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.940e-49 Identity = 81/140 (57.86%), Postives = 107/140 (76.43%), Query Frame = 3
Query: 165 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIVDDR 584
R V++RVPAG+AKPGPAIGQALGPLGINMMEFCK FN+ T+ + NTP+P LTA T+R+FTF +P T+W LKRCAGI+KG R GH G + ++ +YEIAK K +DH L L+S+C+S+ A+A SMG+++ +DR
Sbjct: 6 RIVKLRVPAGSAKPGPAIGQALGPLGINMMEFCKAFNQATEQLAPNTPIPVRLTAMTNRTFTFVTKSPPTSWFLKRCAGIDKGAQRPGHSVVGSVSVQQVYEIAKAKQQDDHLQHLHLKSLCQSIIASATSMGIQVTNDR 145
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAQ2_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.140e-46 Identity = 80/141 (56.74%), Postives = 104/141 (73.76%), Query Frame = 3
Query: 165 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIVDDRE 587
R V++ VPAG AKPGPAIGQ+LGPLG+NM EFCK FN +T QN P+P L AY DRSF L +P+T+W LK+CAGIEKG ++ G+E G + LK +Y IAK+K + H L PL+S+C+SV +A S+GLE+VDDR+
Sbjct: 57 RLVKLLVPAGAAKPGPAIGQSLGPLGLNMAEFCKTFNAKTSSYEQNVPIPVVLFAYEDRSFELWLKSPRTSWFLKQCAGIEKGAAKPGYETVGHVTLKEVYHIAKLKQRDHHLWLTPLQSICRSVLGSAASLGLEVVDDRQ 197
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RJT6_HETAK) HSP 1 Score: 168 bits (425), Expect = 6.430e-46 Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 3
Query: 165 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQKS 605
R V +RV AG AKPGPAIGQALGPLGINMMEFCK FNE TK + P P +L+AY DRSF F +P T+W LKRCAGI+KG R G+E G + LK +YEI K + H LP E++ +S+ +A SMGL++VDDRE+ + S
Sbjct: 7 RVVNLRVAAGVAKPGPAIGQALGPLGINMMEFCKAFNERTKDLTPEIPTPVKLSAYEDRSFDFTTQSPPTSWFLKRCAGIQKGSGRPGYEAAGTVTLKQVYEIVLAKQKDAHLWHLPPEALARSIIGSAASMGLKVVDDRETNNKAS 153
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAR1_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.250e-42 Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 3
Query: 153 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYC-GKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIVDDR 584
MS+VR+V +RVPA A+PGPAIGQALGPLG+NM EFCK+FNE T V + +P L A+ DR+F F + +P T+ M+KR AG+EKG R G + G I ++A+YEIAK+K + H +P+ SV KS+ TALSMG+E++DD+
Sbjct: 1 MSYVRSVLLRVPAAAARPGPAIGQALGPLGVNMAEFCKQFNERTAGYVSSWTLPVRLDAFADRTFEFHVRSPPTSHMIKRAAGLEKGAGRPGAQSAVGSIRVEAVYEIAKIKVQDTHLADMPIRSVAKSIVGTALSMGVEVIDDK 145
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RUG3_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.400e-42 Identity = 71/135 (52.59%), Postives = 102/135 (75.56%), Query Frame = 3
Query: 168 TVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEI 572
T R+ VPAG AKP PAIGQALGPLG+NMM+FCK FN +T++ N P+P +LTAY DR+F F + TP T+W++K+ +GIEKG S G E G + +KA+YEIAK+K ++ + +PL+S+CK+V ++ SMG+++
Sbjct: 8 TCRLLVPAGAAKPSPAIGQALGPLGVNMMDFCKGFNAQTENFQPNIPLPVKLTAYGDRTFKFDVKTPHTSWLIKKASGIEKGSSTPGSEIVGTLSVKAVYEIAKLKQSDPNLASIPLKSLCKTVMSSCKSMGIKV 142
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C344_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.410e-41 Identity = 75/135 (55.56%), Postives = 100/135 (74.07%), Query Frame = 3
Query: 174 RMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSA-EDHSVLLPLESVCKSVRATALSMGLEIV 575
RMRV AG AKP PAIGQALGPLG+NMMEFCK FN+ T +V TPM LTA+ DR+FTF + +P +W LKR AG++KG + GH+ GK+GL+A+YEIA +K +DH LP+ ++ ++V ATA SMG+++V
Sbjct: 9 RMRVLAGAAKPSPAIGQALGPLGVNMMEFCKSFNDRTGALVSETPMRVHLTAFQDRTFTFDVLSPDVSWFLKRAAGVDKGATSPGHDSPGKVGLRAVYEIAALKQRHDDHLSALPMPALVRNVCATAKSMGIKVV 143
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K313_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.550e-41 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 3
Query: 171 VRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKIGLKALYEIAKVKSAEDHSVLLPLESVCKSVRATALSMGLEIV 575
VR+RV AG A P PAIGQALGPLG+NMMEFCK FNE T +V+N P+P LTAYTDR+F F TP T+W LK+ AGI G + G G + L+ +YEIAKVK ++ + L+S+CK++ +A SMGL++V
Sbjct: 12 VRLRVLAGKASPSPAIGQALGPLGVNMMEFCKAFNERTSKIVENVPVPVVLTAYTDRTFNFATKTPPTSWFLKKAAGISSGSATPGQAVVGSVSLRQIYEIAKVKQQDEMVDYIDLQSICKTLIGSAKSMGLDVV 146 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig867.16781.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig867.16781.1 >prot_E_fasciculatus_S2_contig867.16781.1 ID=prot_E_fasciculatus_S2_contig867.16781.1|Name=mRNA_E_fasciculatus_S2_contig867.16781.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=155bp MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNback to top mRNA from alignment at E_fasciculatus_S2_contig867:1670..6801- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig867.16781.1 ID=mRNA_E_fasciculatus_S2_contig867.16781.1|Name=mRNA_E_fasciculatus_S2_contig867.16781.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5132bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig867:1670..6801- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig867:1670..6801- >mRNA_E_fasciculatus_S2_contig867.16781.1 ID=mRNA_E_fasciculatus_S2_contig867.16781.1|Name=mRNA_E_fasciculatus_S2_contig867.16781.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=465bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig867:1670..6801- (Ectocarpus fasciculatus EfasUO2)back to top |