mRNA_E_fasciculatus_S2_contig8652.16767.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: GT8 (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZH8_9PHAE) HSP 1 Score: 479 bits (1234), Expect = 3.610e-167 Identity = 232/242 (95.87%), Postives = 236/242 (97.52%), Query Frame = 1
Query: 100 MVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKAVSDEVIEVEPIAMPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQMKMG 825
MVTSDDFVIGAEV+LHSLREHCGGSTRR ALVVMVTSGVSQLKRQALK VSDEVIEVEPIA+PIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVM D+DELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEEL SYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEE+NRKGDLEM WWQR VQMKMG
Sbjct: 1 MVTSDDFVIGAEVLLHSLREHCGGSTRRPALVVMVTSGVSQLKRQALKVVSDEVIEVEPIAVPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMVDIDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELPSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEETNRKGDLEMTWWQRCVQMKMG 242
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Glycosyltransferase, (family GT8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMF4_9STRA) HSP 1 Score: 305 bits (781), Expect = 2.610e-98 Identity = 144/248 (58.06%), Postives = 186/248 (75.00%), Query Frame = 1
Query: 73 DERGVAFVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKAVSDEVIEVEPIAMP-IKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYW-EAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYV 810
D A+ T+VT+D++ IGAEV+L SL+E + R VV++T VS R L+ V EV+EV P++M A+ HV WA+VGYTKLR+WGL+Q+ ++ YIDAD LV+G ++++F R+VDFAAAPDVFPPDKFNAGV++V P+ + +DMM K+ EL SYDGGDTGFLNAYF +WF+ A ARLPF YNA RT+YW THEK P YW EA+ P+KIIHFCSSPKPWE +KGDLEM+WW ++V
Sbjct: 4 DSERYAYATLVTTDEYAIGAEVLLQSLKEFSSNAAIHR--VVLITPNVSTSARARLQRVGCEVLEVMPLSMASCPSASDHVSGWAEVGYTKLRIWGLVQYTKIFYIDADCLVVGAVEDVFKRDVDFAAAPDVFPPDKFNAGVLLVKPNEAIFQDMMRKIPELPSYDGGDTGFLNAYFPNWFTYAAEARLPFGYNAQRTMYWMTHEKAPAYWNEAVKPLKIIHFCSSPKPWE-GKKKGDLEMLWWAKFV 248
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F1_9STRA) HSP 1 Score: 295 bits (755), Expect = 1.340e-94 Identity = 139/246 (56.50%), Postives = 179/246 (72.76%), Query Frame = 1
Query: 85 VAFVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKAVSDEVIEVEPIAMPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQMKM 822
+AFVT++T+D F +G EV+L SL + +V++VT VSQ R L + + ++EPI P A HV W D GY KLR+WGL+++ RVVY+DAD LVM + ELF+RE DFAAAPDVFPPDKFNAGV+V+ P V EDM+SK+ L SYDGGDTGFLNAYF DWFS PAA+RLPFA+NA RT++W T +NPGYW+A GP KIIH+ S+PKPW+ +KG+LEM+WWQ Y++ +M
Sbjct: 1 MAFVTILTNDSFKMGVEVLLFSLEQT--SMQDNVDVVILVTPQVSQFTRNQLVRSNRRIKQIEPIENP--NAEAHVQGWVDSGYAKLRLWGLLEYSRVVYLDADCLVMEPIHELFEREADFAAAPDVFPPDKFNAGVLVLKPDQAVYEDMLSKLNALPSYDGGDTGFLNAYFPDWFSCPAASRLPFAFNAQRTLHWLTAARNPGYWQAAGPHKIIHYSSNPKPWDSGAKKGELEMIWWQYYLRSRM 242
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMD1_9STRA) HSP 1 Score: 285 bits (729), Expect = 1.040e-89 Identity = 133/252 (52.78%), Postives = 182/252 (72.22%), Query Frame = 1
Query: 88 AFVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKAVSDEVIEVEPIAMPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQMKMGSVPGMG 843
A+ T++TS+DFV G EV+LHSL++ + R L+V+VTS + + RQ L ++ + EVEPIA P +R +W GYTKLR+W L+++R +VYIDADA+V+ ++DELF E FAAAPD+FPPDKFNAGV+V+ P L V + MM V ++DGGDTGFLN+YF DWFS PA ARLPF YNA RT++W TH+K PGYW +I P+KI+HF SSPKPW+++ KG++E++WWQ + ++ PG G
Sbjct: 16 AYATLITSEDFVDGGEVLLHSLKK----TGTDRDLIVVVTSDICKTSRQRLSRIAQRICEVEPIANPFERQDA---SWKGSGYTKLRLWTLVEYRCIVYIDADAVVLSNIDELFFLETHFAAAPDLFPPDKFNAGVLVLRPDLDVFQQMMETVPLAKTHDGGDTGFLNSYFHDWFSYPANARLPFRYNAQRTLFWMTHQKTPGYWNSIKPIKILHFVSSPKPWQDTKSKGEIELIWWQFALDLRS---PGGG 257
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Glycosyltransferase (putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD68_PYTIN) HSP 1 Score: 265 bits (678), Expect = 8.310e-83 Identity = 131/254 (51.57%), Postives = 175/254 (68.90%), Query Frame = 1
Query: 88 AFVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVS-----QLKRQALKAVSDEVIE---VEPIAMPIKRAAG--HVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQMK 819
A+VT++TSD F IG E + +SL + R LVV+ T VS +L+R S I V I +P AG HV W + GY+KL V+ L +F ++VYIDAD LV+ ++D+LF+RE DFAAAPDVFPPD+FNAGV+VV PS + E++ +++ L SYDGGDTGFLNA+F DWF AA+RLPF YNA RT+YW ++KNPGYW+A+ P+KI+HF S+PKPW++ RKGDLEM+WWQ Y + +
Sbjct: 4 AYVTLLTSDAFSIGVEALAYSLFR----TRPRYPLVVLHTPQVSAACCAKLERFFAALQSQLPISLRRVPDIGIPELTPAGSVHVAGWVNSGYSKLHVFALEEFEKIVYIDADCLVLENVDDLFERETDFAAAPDVFPPDRFNAGVLVVTPSAVRFEELHARINTLKSYDGGDTGFLNAFFRDWFCSDAASRLPFRYNAQRTMYWLVNDKNPGYWDAVQPIKILHFSSNPKPWDDPRRKGDLEMLWWQLYTESR 253
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Unidentified (vitellogenin-linked transcript family member (Uvt-5) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TND6_9STRA) HSP 1 Score: 266 bits (679), Expect = 2.620e-82 Identity = 138/277 (49.82%), Postives = 179/277 (64.62%), Query Frame = 1
Query: 88 AFVTMVTSDDFVIGAEVMLHSLREHCGGSTR----RRALVVMVTSGVSQLKRQALKAVSDEVIEVEPIAMPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEE--LSSYDGGDTGFLNAYFADWFSRP-----------------------AAARLPFAYNALRTVYWTTHEKNPGYWEAIGP-VKIIHFCSSPKPWEESN--RKGDLEMMWWQRYVQMKM 822
AFVT++T+D F GA+V+LHSLR + R +VV+VT +S+ R+ L+ DE++ VEPIA P + HV W D G+TKL++WGL QF RVVY+DAD LV+ D+ ELF +VDFAAAPD+FPPD+FNAGVM+V P+L V EDM+ V+ L SYDGGDTGFLNA+F W+S P + ARLPF +NA RT++W TH PGYW A+ VKI+HF SSPKPWE +KG+LE+ WW +V+M M
Sbjct: 25 AFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAENS-HVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHM 300
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Hypothetical (protein n=4 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N210_GUITH) HSP 1 Score: 263 bits (672), Expect = 8.310e-82 Identity = 127/245 (51.84%), Postives = 174/245 (71.02%), Query Frame = 1
Query: 88 AFVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKAVSDEVIEVEPIAMPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQMKM 822
A++TMVTSD +++GA V+ HS+ + + +R + MVT VS R+AL+ +I VE I+ K ++G + AW GYTKL +W L +F ++VY+DAD LVM +D+LF RE FAAAPD FPPD+FNAGV+VV PSL V EDM+S++ + SYDGGDTGFLN+YF DWF+ A+RLPF YNALRT+YW T +K PGYW A+G V+ +HFCS PKPW+++ KG+LE WW + + ++
Sbjct: 12 AYITMVTSDSYLMGALVLAHSILK-TQDKSNQRPICCMVTDEVSADSRKALEQAGLRIIMVESISS--KESSG-IDAWDQSGYTKLNIWKLTEFSKLVYVDADCLVMESIDDLFSRETRFAAAPDTFPPDRFNAGVLVVEPSLEVFEDMISRIGVMHSYDGGDTGFLNSYFHDWFTMGEASRLPFRYNALRTMYWLT-QKKPGYWNAVGAVRCLHFCSFPKPWDQAP-KGELEQKWWVAFAECQL 250
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Aste57867_8336 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJZ5_9STRA) HSP 1 Score: 260 bits (665), Expect = 5.690e-81 Identity = 120/246 (48.78%), Postives = 171/246 (69.51%), Query Frame = 1
Query: 91 FVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKAVSDEVIEVEPI-AMPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREV---DFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQM 816
+ T+VTSD+FVIG EV+ +SLR++ + L+V+ T +S Q L+ + + A+P HVP W + GYTKL V+ L++F +V YID+DA V+ ++D++F+R++ FAAAPD+FPPD+FNAGV++V PS + D+M ++ L SYDGGDTG+LNA+F DWF+ + ARLPFAYNA RT++W TH+ PGYW+A+G VKI+H SSPKPWE +KG+LEM+WW Y +M
Sbjct: 7 YATLVTSDEFVIGVEVLAYSLRKYGA----KFPLLVLYTDQLSAHGVQKLQRIDPATTTPRRVDALPNPNVEVHVPGWVNSGYTKLHVFNLVEFAKVFYIDSDAFVLANVDDMFERDIAPYPFAAAPDIFPPDRFNAGVLLVQPSAALFRDLMDQIALLPSYDGGDTGYLNAFFPDWFTSDSRARLPFAYNAQRTMHWLTHDTKPGYWDAVGRVKILHCSSSPKPWENPAKKGELEMLWWHYYTEM 248
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Glycosyltransferase (putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEL0_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.380e-80 Identity = 123/256 (48.05%), Postives = 178/256 (69.53%), Query Frame = 1
Query: 88 AFVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKA------VSDEV--IEVEPIAMPIKRA---AGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQMKM 822
A+ TM+TSDDF +G E +L+S C S+ +++ TS VS+ L +S+ + + V+ I +P + + HV +W + YTKL ++GL +++++VYIDADAL++ ++DELF+ + FAAAPD+FPPD+FNAGV+V+ P V E++++K + + SYDGGDTGFLN F+DWF R AA+RLPF YNA RT+YW + KNPGYW+A+ P+KI+HF SSPKPWEE NR GDLEM+WW Y + ++
Sbjct: 3 AYATMITSDDFQMGVEALLYSWS--CTHSSIN--FLILYTSQVSKRVLDKLHRFLETLRMSERIKWMRVDSIPIPASSSDPPSSHVESWLNSAYTKLNIFGLEEYQKIVYIDADALILTNIDELFEMDTSFAAAPDIFPPDRFNAGVLVIKPGKDVFENLLAKAKTIKSYDGGDTGFLNLVFSDWFQRDAASRLPFRYNAQRTMYWMVNSKNPGYWKAVEPLKILHFSSSPKPWEEPNRIGDLEMIWWMYYTKAQI 254
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X313_9STRA) HSP 1 Score: 259 bits (662), Expect = 1.660e-80 Identity = 118/251 (47.01%), Postives = 176/251 (70.12%), Query Frame = 1
Query: 91 FVTMVTSDDFVIGAEVMLHSLREHCGGSTRRRALVVMVTSGVSQLKRQALKAVSDEVIEVEPI-AMPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMGDLDELFDREV---DFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELSSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEESNRKGDLEMMWWQRYVQMKMGSV 831
F T+VTSDDFVIG +V+++SLR+H + L+V+ T+ +S Q L+ + + + A+P HVP W + GYTKL V+ L++F V YID+DA V+ ++DE+ +R++ FAAAPD+FPPD+FNAGV+++ P+ + + ++S+ + SYDGGDTG+LNA F DW++ A ARLPFAYNA RT++W T+ K PGYW+A+G VK++H SSPKPWE ++KGDLEM+WWQ + +M + ++
Sbjct: 4 FATLVTSDDFVIGVQVLVYSLRKHGA----KYPLIVLYTNQLSPCGVQKLQQIYPSTTTIRLVEALPNPNVHVHVPGWINSGYTKLHVFNLVEFSTVFYIDSDAFVLANVDEVLERDIRPYPFAAAPDIFPPDRFNAGVLLLHPNAELFQRLVSQSAQFQSYDGGDTGYLNAVFPDWYTYDAKARLPFAYNAQRTMHWLTYAKKPGYWDAVGDVKVLHCSSSPKPWESPDKKGDLEMLWWQYFTEMNLEAM 250 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8652.16767.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8652.16767.1 >prot_E_fasciculatus_S2_contig8652.16767.1 ID=prot_E_fasciculatus_S2_contig8652.16767.1|Name=mRNA_E_fasciculatus_S2_contig8652.16767.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=285bp MAEAATGIGRGKTPCDDGAGEETPDERGVAFVTMVTSDDFVIGAEVMLHSback to top mRNA from alignment at E_fasciculatus_S2_contig8652:1796..5227- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8652.16767.1 ID=mRNA_E_fasciculatus_S2_contig8652.16767.1|Name=mRNA_E_fasciculatus_S2_contig8652.16767.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3432bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8652:1796..5227- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8652:1796..5227- >mRNA_E_fasciculatus_S2_contig8652.16767.1 ID=mRNA_E_fasciculatus_S2_contig8652.16767.1|Name=mRNA_E_fasciculatus_S2_contig8652.16767.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=855bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8652:1796..5227- (Ectocarpus fasciculatus EfasUO2)back to top |