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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 482 |
| Hectar predicted targeting category | mitochondrion |
| Exons | 4 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-11_002960.1 |
| Cds size | 480 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842521.8264897-CDS-E_fasciculatus_S2_contig8646:14..103 | 1696842521.8264897-CDS-E_fasciculatus_S2_contig8646:14..103 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8646 15..103 + |
| 1696842521.8393054-CDS-E_fasciculatus_S2_contig8646:198..274 | 1696842521.8393054-CDS-E_fasciculatus_S2_contig8646:198..274 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8646 199..274 + |
| 1696842521.851769-CDS-E_fasciculatus_S2_contig8646:1410..1531 | 1696842521.851769-CDS-E_fasciculatus_S2_contig8646:1410..1531 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8646 1411..1531 + |
| 1696842521.8629506-CDS-E_fasciculatus_S2_contig8646:2395..2589 | 1696842521.8629506-CDS-E_fasciculatus_S2_contig8646:2395..2589 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8646 2396..2589 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8646.16763.1 >prot_E_fasciculatus_S2_contig8646.16763.1 ID=prot_E_fasciculatus_S2_contig8646.16763.1|Name=mRNA_E_fasciculatus_S2_contig8646.16763.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=160bp
MVVSAPTGRVRVARGPHARLKAFDTRAMNRRRWWRWNAGWGERTASFSEG
AEDDVETVREGWRAQEACTTAVGSNNRPGWTRYSVQQCFREQVEAAPARD
EAGAADAAAGLTSAVESRAVSRGALSARIITWLKRTCILMAFSRLRTNAE
RQGTGAAGQA back to topmRNA from alignment at E_fasciculatus_S2_contig8646:15..2589+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8646.16763.1 ID=mRNA_E_fasciculatus_S2_contig8646.16763.1|Name=mRNA_E_fasciculatus_S2_contig8646.16763.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2575bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8646:15..2589+ (Ectocarpus fasciculatus EfasUO2)
ATGGTCGTATCGGCCCCCACGGGTCGGGTTCGCGTGGCTCGTGGCCCCCA
CGCGCGCCTGAAGGCCTTCGACACCAGAGCGATGAACAGGTACTGGTCCT
GGTCCACGAACTGTATCAGGTGCGACAATATGTCTTTGGTTTCAAGGGCG
CGTCTGCTTGCCACCGAGCTTCCCTGCGCCACAGAAGGCGGTGGTGGCGA
TGGAATGCAGGGTGGGGGGAGCGGACGGCATCGTTCAGTGAGGGGGCGGA
GGATGATGTCGTTCAGTGAGTACAGACGTGCCGTATGTACACCGTAGATT
ATTTTTGAGAACGACCCGGGGGGCGGTCTTGTTCTTTGATGAAGAACCCT
CCGGGGCGTTGTTAAAGGTAGAGGGGGGTGATCGATTTTCAAATAGTAAA
ATTGCTCGTGGGCGACAAAGTTCCCTAATAGCTCGTGGGCGACCAAGTTC
CCGGTGGCGTTGTCTCTTTTTCTCAGGTACTCGGCACCCGTACCCACAAC
AAAGCGCCACCCACCATGTATCGGGCCTCAACGGCATGTACGAGAAAGCA
TACAACATGCAAACGAAGATTGATTGGGGAAGGTTGCGACGCGGTGAATG
GCACGCAATCCGACCCCAAGGGTAGTGCTCGGGCTAGACCTCTGGAAACC
CTCGCAGGGTGCCTCAAACATTTTCTGAAACGATTACCCCGCGGCGAACT
CAAAGAGAGGTAGAAGGGCGAAAACAAATGAAAACGCATACCGAGGGTCT
ACCGTGAAGTGTTTGTGCTACCTCTGCGACATTTGTATTTGGGGGTGGGC
GTTCTCATGGAGGGGGGCGTTCATCTCGAAAGGATACGACGGTACGCCTA
GCCCATGGAAGTACAGGGGCAAGAATGGCACGAAAAGTGCACGCGAGTTT
CATATGCAGTCAGCAGCTCCTTCGATCCACCCAACCGTGCAGCTAACTCG
ATTCAGAGGACCAACAGGTGAAAGAAAAAGTCCAGAATGGGCAACGAAGA
ATGAGTTCGACTCAGCGGTGGGCGCAAGCACGGCCTTCTCTCGCCTTCAA
ACGAGTTCTATACGCTTGCGGATTCGGCCGATCAATGGGCACGTTTTGTG
GCCGATTCTTTGGACTGCTATACACGCCTGTCCCATAGTATCTACAGGTG
TGCGTCGAGACACGGACTGGCGTTGATCACGGACTAGCATATATTGGGGG
GGGCGCCCAGACGGATACCTCACACATCGACTGCGTCACAGCGATAGAAT
CGGTTTCCTCACATCAGATAGGCTGTAGTGGACTTGGTCCGCAATGCCGG
AGGCGGATCTTCCTCCTCCGTTTGGTCCGGTGCCTGCTACCCCGCTCTCG
TTGTAGGACGACTTCGTCTCCTCCACACCTTGGTTGCTGTACGCAGGAGA
CGGTTCGGGAGGGGTGGAGGGCGCAAGAGGCATGCACGACAGCAGTTGGG
TCAAATAATCGGCCAGGCTGGACAAGATACTCGGTACAACAATGCTTCCG
AGAACAAGTTGAGGCTGGTCAAGCCACGAAACTTGCTTTAGATGCCTAGC
AGACTGTATTGATTGCTCCTCATCTATGTAGGCCTATCTCTGGGGCTTTG
GGTGGTCACCGCAGCCTTCGCGGTGCAACATGCGAGCCGTGATGCCCGTT
CGTTCCATACGGGTTTCCCGGTGTATTATTCGTGGCTTCTTCGATGGAAA
TATCGCGTCTCGCGAGCATCTACGCCCAGGACTATGCATGGCCATCTTCC
CGTTTACTCGTCATCATACAGGTACATACCCTTTTCCTCGACACGGGGGG
GGTGCTTGTTCCGACATAACAAAGTCCATGGCGATAACTCCCGTTTCTAC
TGCCTTTTCGTTATGCGCTCTTGCCTGGTCTAGACGAGAAGTTCTCTGAT
GCCCAAAGTCTGAAGAAATGCCTTTGAAATTTCTTAACTCTGGGAAATTT
CGCCTCTGTTCGATCATTTCCGCGATCCCGACAGCAGGTCAAGCGCTGTC
GAGATGCTGGCAAAACTGTGCGTGTGTCTCACGTTTACAGGGAAAAAAAC
AGACGCTCTGAGCTACAATCCAGTGGCGCTTTCCAGCCCGACGTCGGAAA
TAGACAATGTCTGGAAGAGAATAAGCTAATCAAACCAACTCGTGGAACAC
GGTTTGATGTCGATGACATTCTCGTCGGCCCCACCCTTGACATGTTGGGG
TCACCAGCCTGGCGCAACCGACGCAACCGACGCACGGACGTGGTTCGTGT
GGGGAATTCCTCGGCATGACGAACGCCATAGACTCAGTCAGATGGTCTTT
GAACCCACCTTCCTCCTCCAATCTCTCCGCGGCTGGTGCTGCCCGTGCCG
CTTCTGGTGATGCCGACACCTGTAGTTTCAGCACCGGCCCGTGATGAGGC
AGGAGCCGCGGATGCTGCAGCTGGCTTGACGTCGGCTGTTGAGTCCCGTG
CTGTATCTCGTGGTGCACTTTCAGCGCGAATAATTACTTGGCTGAAGAGA
ACTTGTATCTTGATGGCCTTTTCGAGGCTACGCACGAATGCCGAGAGACA
GGGGACGGGGGCGGCCGGTCAAGCA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8646:15..2589+ >mRNA_E_fasciculatus_S2_contig8646.16763.1 ID=mRNA_E_fasciculatus_S2_contig8646.16763.1|Name=mRNA_E_fasciculatus_S2_contig8646.16763.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=480bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8646:15..2589+ (Ectocarpus fasciculatus EfasUO2)
ATGGTCGTATCGGCCCCCACGGGTCGGGTTCGCGTGGCTCGTGGCCCCCA
CGCGCGCCTGAAGGCCTTCGACACCAGAGCGATGAACAGAAGGCGGTGGT
GGCGATGGAATGCAGGGTGGGGGGAGCGGACGGCATCGTTCAGTGAGGGG
GCGGAGGATGATGTCGAGACGGTTCGGGAGGGGTGGAGGGCGCAAGAGGC
ATGCACGACAGCAGTTGGGTCAAATAATCGGCCAGGCTGGACAAGATACT
CGGTACAACAATGCTTCCGAGAACAAGTTGAGGCTGCACCGGCCCGTGAT
GAGGCAGGAGCCGCGGATGCTGCAGCTGGCTTGACGTCGGCTGTTGAGTC
CCGTGCTGTATCTCGTGGTGCACTTTCAGCGCGAATAATTACTTGGCTGA
AGAGAACTTGTATCTTGATGGCCTTTTCGAGGCTACGCACGAATGCCGAG
AGACAGGGGACGGGGGCGGCCGGTCAAGCA back to top
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