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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 1995 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-12_000680.1 |
| Cds size | 1995 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842521.4963443-CDS-E_fasciculatus_S2_contig8642:533..2357 | 1696842521.4963443-CDS-E_fasciculatus_S2_contig8642:533..2357 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8642 534..2357 - |
| 1696842521.5076413-CDS-E_fasciculatus_S2_contig8642:2587..2654 | 1696842521.5076413-CDS-E_fasciculatus_S2_contig8642:2587..2654 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8642 2588..2654 - |
| 1696842521.5178735-CDS-E_fasciculatus_S2_contig8642:3145..3249 | 1696842521.5178735-CDS-E_fasciculatus_S2_contig8642:3145..3249 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8642 3146..3249 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8642.16758.1 >prot_E_fasciculatus_S2_contig8642.16758.1 ID=prot_E_fasciculatus_S2_contig8642.16758.1|Name=mRNA_E_fasciculatus_S2_contig8642.16758.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=665bp
RSQHEYQDCKAALQFGKTNAGVTRAVHERRQARAGISLRKKQQENIRREN
AILLTRLASPKRTALDFNKFETDFTKSREHHRLAQCDRTVGHTAVFSHGS
GSDGTPCGTSAPHPQSAHRSGRPRPASAGLSSTHQAKLGVGKLLSGTGQN
IRQRGNNNTACVGKAGGSAEVPSRVALRRPHSALGLRRGDKHHDLFDARA
ADPGWGSSRASLTSRPPSAPERIEWGGWGAGSESIFSPPARQRRPPFLRK
WPGGRGTIRGGRRSRGSVGPAHQGRQRLHVKESRDRDDGHDGDVVSVEES
SKGGSQFDDCRGGSRGDRLSSLGRTLLAEAKVLIGGRKNAETSNSSGEAR
GSCMKVNLRFLSLDGLIRFQAGIRKTLQGFVVEASLATPHRTPIKGGVAP
ESDGVVGGCGVNVASTSVAVPMVQEYLKNAEGTPTAGNETGTSSSALTQF
REARPLDEWGNYREINELLEQDGQRDLFQTLLGSCRVITSPAGDADRIVG
VQLLQVNSGRKLGISVTTADTTPLETRTHHPPKSPSPQPSPRRPGATERY
GKNASPIAGMMTDTGRSLAGGLVGSSSTGQQTGTAGSNTRSHGRFGEEGD
EGRGRKPSIHIRMPTTTRPPNTPRTEPEEMSESGDGDENEDEGGDDCEDE
DEDEDGDGDESESC* back to topmRNA from alignment at E_fasciculatus_S2_contig8642:534..3249- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8642.16758.1 ID=mRNA_E_fasciculatus_S2_contig8642.16758.1|Name=mRNA_E_fasciculatus_S2_contig8642.16758.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2716bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8642:534..3249- (Ectocarpus fasciculatus EfasUO2)
AGGTCCCAACACGAGTATCAAGATTGCAAGGCAGCGTTACAGTTCGGCAA
AACCAACGCTGGGGTAACACGAGCGGTCCATGAACGAAGGCAAGCACGAG
CAGGGTCCACGACTGAGGGTCTATTGGGCAGGCGCAGCAAAAAACGCATT
TCTGCCTTGCTTGCCGGGGAGGGAGGCAGGCACCAGTACTAATGCCAATG
CCAATGCGGATACGGTGACCTTTCGACTTGTACCGAGAAAAACGAGGTTT
TGACGAACGTAACCGATGACGAATCGTCCCGAATAATAAAAGGAGCGAAG
GAGTTTGACGGTGCGAACACCGGGAGCATATTCATTCAAACGTCTCCGAA
CCTGTGTGTTTGGTGGCAGACGGTGGCATGCATCGCCTGACTGTTGGGTG
CAAGCAGCTGCATGAGAGGAAAAAAACAGACAGGTGGTTGACTCAATGCC
TTTAGTTAACAGAGACATACACCGTATATTCAGCCGTATGGGGGCCCTCG
TCGCATCATATACCCCAGAGTCCCCGCAGATAAGTGTCGGGTGCCGACCC
AAACACCTGAAGACGAAAAACTGCGTCCTACCGATCAAACCGCAGGATTT
CGCTGAGGAAGAAACAACAAGAGAATATTCGAAGGGAGAACGCGATACTT
TTGACAAGGCTGGTGAGGGTATCCGTGCGTTCTTCATTAGGCACCAACAC
AGTGTGTGTCACCATGCATATTCGCCGATACACGTAATACCGTCCAGTAC
AACGCGCCCGTGGCGGCCACCTCATGGTCGACAAAGTCTTAACTGTTGTA
GAGTTGACTGGCCTGCAAACGTACGGAGACCATCGTAGTTGGTGGCAAGA
CCAAAGATAATCCCGGTGATGTGACTCATCGTACATCTACAGGCGAGCCC
TAAGCGTACCGCGTTAGACTTCAACAAGTTTGAGACCGACTTCACCAAGA
GCCGCGAGCACCACCGCCTGGCCCAATGCGACCGCACGGTGGGACACACG
GCAGTATTTTCGCACGGCTCAGGGTCCGACGGCACCCCCTGCGGCACATC
GGCACCTCACCCTCAGTCAGCCCATCGGTCAGGACGACCTCGTCCAGCGT
CCGCAGGGCTGAGTTCAACTCATCAGGCCAAACTTGGTGTTGGCAAACTT
TTGAGCGGCACAGGTCAGAACATCAGACAGCGGGGCAACAACAACACGGC
TTGTGTCGGGAAAGCCGGGGGTAGTGCGGAAGTTCCATCACGCGTAGCTC
TGCGCAGGCCGCACTCAGCTTTGGGTCTGCGACGGGGCGACAAGCACCAC
GATCTTTTCGATGCTCGCGCCGCGGATCCCGGATGGGGGAGCAGCAGGGC
AAGCTTGACCTCCCGCCCACCGTCGGCGCCGGAGAGGATTGAATGGGGAG
GCTGGGGGGCTGGCTCCGAATCCATTTTCTCTCCTCCAGCGAGACAAAGA
AGACCGCCGTTCCTCCGAAAATGGCCCGGCGGTCGAGGCACGATACGTGG
GGGGCGCCGGTCAAGGGGATCAGTAGGACCAGCCCACCAAGGGCGCCAGA
GGTTACATGTCAAAGAGTCAAGGGATCGCGACGATGGTCACGACGGAGAT
GTGGTGTCGGTGGAGGAAAGCAGTAAAGGTGGGTCACAATTCGACGACTG
CCGGGGTGGCAGTCGAGGTGATCGCCTCTCGTCTCTTGGACGTACTCTGC
TCGCCGAAGCGAAGGTTCTCATTGGCGGCAGGAAAAACGCCGAAACTTCC
AACAGCTCTGGAGAAGCAAGAGGGAGTTGCATGAAGGTAAATCTAAGATT
TCTAAGCTTGGATGGGCTCATCAGATTCCAGGCAGGAATCAGAAAGACTC
TCCAAGGATTCGTGGTCGAGGCCTCCCTCGCCACCCCTCATCGAACCCCT
ATCAAAGGTGGTGTCGCGCCAGAAAGCGACGGCGTGGTGGGTGGCTGCGG
CGTCAACGTTGCATCTACATCTGTTGCTGTGCCGATGGTGCAAGAATACT
TGAAGAACGCAGAAGGAACACCAACAGCAGGTAACGAAACTGGAACGTCG
TCCTCAGCTCTTACCCAGTTCCGTGAGGCACGCCCCTTGGACGAGTGGGG
GAACTACCGTGAGATCAACGAGCTATTGGAGCAAGATGGACAGCGCGATC
TTTTTCAAACCCTGCTCGGAAGTTGTCGTGTCATCACATCACCAGCAGGC
GATGCTGACCGGATCGTTGGTGTGCAGCTGCTGCAGGTAAACTCCGGGCG
CAAGCTTGGAATATCTGTGACTACCGCAGACACCACGCCTCTAGAGACAA
GGACACATCATCCCCCCAAATCCCCTAGTCCTCAGCCTTCGCCTCGTCGC
CCAGGGGCGACAGAAAGGTACGGAAAGAACGCCTCACCGATTGCCGGCAT
GATGACTGACACTGGCCGGTCATTGGCTGGGGGGTTGGTTGGGAGTTCGT
CTACCGGGCAACAAACTGGGACCGCTGGCTCGAACACACGTTCCCATGGG
CGCTTTGGCGAAGAAGGCGATGAAGGTCGTGGGCGGAAGCCGTCTATTCA
CATACGGATGCCCACAACGACGCGTCCGCCGAACACCCCGAGGACAGAGC
CCGAAGAAATGTCAGAGAGTGGCGACGGGGACGAAAACGAGGACGAGGGA
GGCGACGACTGCGAGGACGAAGATGAAGATGAAGATGGGGATGGGGATGA
ATCTGAAAGTTGTTGA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8642:534..3249- >mRNA_E_fasciculatus_S2_contig8642.16758.1 ID=mRNA_E_fasciculatus_S2_contig8642.16758.1|Name=mRNA_E_fasciculatus_S2_contig8642.16758.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1995bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8642:534..3249- (Ectocarpus fasciculatus EfasUO2)
AGGTCCCAACACGAGTATCAAGATTGCAAGGCAGCGTTACAGTTCGGCAA
AACCAACGCTGGGGTAACACGAGCGGTCCATGAACGAAGGCAAGCACGAG
CAGGGATTTCGCTGAGGAAGAAACAACAAGAGAATATTCGAAGGGAGAAC
GCGATACTTTTGACAAGGCTGGCGAGCCCTAAGCGTACCGCGTTAGACTT
CAACAAGTTTGAGACCGACTTCACCAAGAGCCGCGAGCACCACCGCCTGG
CCCAATGCGACCGCACGGTGGGACACACGGCAGTATTTTCGCACGGCTCA
GGGTCCGACGGCACCCCCTGCGGCACATCGGCACCTCACCCTCAGTCAGC
CCATCGGTCAGGACGACCTCGTCCAGCGTCCGCAGGGCTGAGTTCAACTC
ATCAGGCCAAACTTGGTGTTGGCAAACTTTTGAGCGGCACAGGTCAGAAC
ATCAGACAGCGGGGCAACAACAACACGGCTTGTGTCGGGAAAGCCGGGGG
TAGTGCGGAAGTTCCATCACGCGTAGCTCTGCGCAGGCCGCACTCAGCTT
TGGGTCTGCGACGGGGCGACAAGCACCACGATCTTTTCGATGCTCGCGCC
GCGGATCCCGGATGGGGGAGCAGCAGGGCAAGCTTGACCTCCCGCCCACC
GTCGGCGCCGGAGAGGATTGAATGGGGAGGCTGGGGGGCTGGCTCCGAAT
CCATTTTCTCTCCTCCAGCGAGACAAAGAAGACCGCCGTTCCTCCGAAAA
TGGCCCGGCGGTCGAGGCACGATACGTGGGGGGCGCCGGTCAAGGGGATC
AGTAGGACCAGCCCACCAAGGGCGCCAGAGGTTACATGTCAAAGAGTCAA
GGGATCGCGACGATGGTCACGACGGAGATGTGGTGTCGGTGGAGGAAAGC
AGTAAAGGTGGGTCACAATTCGACGACTGCCGGGGTGGCAGTCGAGGTGA
TCGCCTCTCGTCTCTTGGACGTACTCTGCTCGCCGAAGCGAAGGTTCTCA
TTGGCGGCAGGAAAAACGCCGAAACTTCCAACAGCTCTGGAGAAGCAAGA
GGGAGTTGCATGAAGGTAAATCTAAGATTTCTAAGCTTGGATGGGCTCAT
CAGATTCCAGGCAGGAATCAGAAAGACTCTCCAAGGATTCGTGGTCGAGG
CCTCCCTCGCCACCCCTCATCGAACCCCTATCAAAGGTGGTGTCGCGCCA
GAAAGCGACGGCGTGGTGGGTGGCTGCGGCGTCAACGTTGCATCTACATC
TGTTGCTGTGCCGATGGTGCAAGAATACTTGAAGAACGCAGAAGGAACAC
CAACAGCAGGTAACGAAACTGGAACGTCGTCCTCAGCTCTTACCCAGTTC
CGTGAGGCACGCCCCTTGGACGAGTGGGGGAACTACCGTGAGATCAACGA
GCTATTGGAGCAAGATGGACAGCGCGATCTTTTTCAAACCCTGCTCGGAA
GTTGTCGTGTCATCACATCACCAGCAGGCGATGCTGACCGGATCGTTGGT
GTGCAGCTGCTGCAGGTAAACTCCGGGCGCAAGCTTGGAATATCTGTGAC
TACCGCAGACACCACGCCTCTAGAGACAAGGACACATCATCCCCCCAAAT
CCCCTAGTCCTCAGCCTTCGCCTCGTCGCCCAGGGGCGACAGAAAGGTAC
GGAAAGAACGCCTCACCGATTGCCGGCATGATGACTGACACTGGCCGGTC
ATTGGCTGGGGGGTTGGTTGGGAGTTCGTCTACCGGGCAACAAACTGGGA
CCGCTGGCTCGAACACACGTTCCCATGGGCGCTTTGGCGAAGAAGGCGAT
GAAGGTCGTGGGCGGAAGCCGTCTATTCACATACGGATGCCCACAACGAC
GCGTCCGCCGAACACCCCGAGGACAGAGCCCGAAGAAATGTCAGAGAGTG
GCGACGGGGACGAAAACGAGGACGAGGGAGGCGACGACTGCGAGGACGAA
GATGAAGATGAAGATGGGGATGGGGATGAATCTGAAAGTTGTTGA back to top
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