mRNA_E_fasciculatus_S2_contig8639.16756.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: Thioredoxin (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSH7_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.380e-67 Identity = 101/106 (95.28%), Postives = 104/106 (98.11%), Query Frame = 1
Query: 1 MTVTPCDTPETLATALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
MTVTPCDTPE L+TAL GAGSKLVV+DFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKF+KNGEVVETVTGADEASIEATARQFK
Sbjct: 1 MTVTPCDTPEALSTALAGAGSKLVVVDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFIKNGEVVETVTGADEASIEATARQFK 106
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: Thioredoxin-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS1_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.990e-37 Identity = 61/98 (62.24%), Postives = 76/98 (77.55%), Query Frame = 1
Query: 7 VTPCDTPETLATALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEA 300
V C T E L +A+ GAG KLVVIDF ATWCGPC++IAP + + S +TDVV+LKVDVD N DA+E YGIEAMPTFKF+KNGEV+E GA+ + ++A
Sbjct: 2 VKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKA 99
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: Thioredoxin (n=3 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7T7S9_NASVI) HSP 1 Score: 116 bits (291), Expect = 8.750e-32 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = 1
Query: 22 TPETLATALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
T E L T LT AG KLVVIDF ATWCGPCK IAP L +LS+ LTDVVFLKVDVDE +E+Y + +MPTF F+KNG V++ +GA+ ++ T ++ K
Sbjct: 7 TAEELKTKLTEAGEKLVVIDFFATWCGPCKMIAPKLDELSQELTDVVFLKVDVDELEGVAEEYDVNSMPTFVFIKNGSVLDKFSGANIEKVKLTVQKHK 105
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: Thioredoxin (domain-containing protein n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7H610_NASVI) HSP 1 Score: 115 bits (288), Expect = 2.040e-31 Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 28 ETLATALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
E L T LT AG KLVVIDF ATWCGPCK IAP L +LS+ LTDVVFLKVDVDE +E+Y + +MPTF F+KNG V++ +GA+ ++ T ++ K
Sbjct: 2 EELKTKLTEAGEKLVVIDFFATWCGPCKMIAPKLDELSQELTDVVFLKVDVDELEGVAEEYDVNSMPTFVFIKNGSVLDKFSGANIEKVKLTVQKHK 98
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: Thioredoxin (n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6UAS8_9GOBI) HSP 1 Score: 114 bits (286), Expect = 4.760e-31 Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 46 LTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
L AGSKLVV+DF A+WCGPCK IAP K+++ DVVFLKVDVDE SD SEK GI +MPTF+F KNGE +E +GA E + AT + K
Sbjct: 13 LKAAGSKLVVVDFTASWCGPCKMIAPVFEKMADENKDVVFLKVDVDEASDVSEKCGISSMPTFQFYKNGEKLEQFSGASEEKLRATVAKLK 103
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: Thioredoxin (n=2 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6WUN3_9GOBI) HSP 1 Score: 114 bits (286), Expect = 5.040e-31 Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 46 LTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
L AGSKLVV+DF A+WCGPCK IAP K+++ DVVFLKVDVDE SD SEK GI +MPTF+F KNGE +E +GA E + AT + K
Sbjct: 15 LKAAGSKLVVVDFTASWCGPCKMIAPVFEKMADENKDVVFLKVDVDEASDVSEKCGISSMPTFQFYKNGEKLEQFSGASEEKLRATVAKLK 105
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: thioredoxin-like (n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939D750) HSP 1 Score: 112 bits (280), Expect = 4.250e-30 Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 1 MTVTPCDTPETLATALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASI 294
M+V C T E L AG KLVV+DF+ATWCGPCK I P +A +S + VFLKVDVDENSD +EK+GI AMPTF F K+G+ V+ + GA EA +
Sbjct: 1 MSVIQCHTKEDFDKQLCDAGQKLVVVDFYATWCGPCKVIGPKVAAMSGEYKNAVFLKVDVDENSDTTEKHGISAMPTFLFFKDGQKVDELVGASEAKL 98
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: Thioredoxin (n=1 Tax=Penaeus japonicus TaxID=27405 RepID=A0A4D5XL86_PENJP) HSP 1 Score: 111 bits (278), Expect = 8.310e-30 Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 46 LTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
L+ AGSKLVVIDF+ATWCGPCK IAP L ++S++++DVVFLKVDVDE D + I MPTF F+KNG+ VET+TGA+EA + ++ K
Sbjct: 15 LSEAGSKLVVIDFYATWCGPCKMIAPKLEEMSQSMSDVVFLKVDVDECEDIAADNQITCMPTFLFMKNGQKVETLTGANEAKLREIIQKNK 105
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: thioredoxin (n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077FC24E) HSP 1 Score: 111 bits (278), Expect = 8.310e-30 Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 40 TALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
T L+ AG KLVV+DFHATWCGPCK+IAPF A L+E TDVVFLKVDVDE D + Y + ++P F F+KN E V+ + GA++ ++A Q K
Sbjct: 13 TKLSAAGDKLVVVDFHATWCGPCKQIAPFFAGLAEEFTDVVFLKVDVDEVEDVATLYDVSSIPKFVFLKNKEKVDEMLGANQDKLKALVTQHK 105
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Match: thioredoxin-2 (isoform X1 n=2 Tax=Cephus cinctus TaxID=211228 RepID=UPI000D629B3C) HSP 1 Score: 111 bits (277), Expect = 1.360e-29 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 7 VTPCDTPETLATALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFVKNGEVVETVTGADEASIEATARQFK 318
+TP E L T L AG LVVIDF ATWCGPCK IAP L +LS+ L DV+ KVDVDE D + Y I +MPTF FVKNG+V+ET TGA+ ++ T ++ K
Sbjct: 7 LTPALRSEDLKTKLAEAGDTLVVIDFFATWCGPCKMIAPKLEELSQELKDVIIFKVDVDECEDVAAAYEISSMPTFVFVKNGKVLETFTGANYDKLKNTIQKHK 110 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8639.16756.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8639.16756.1 >prot_E_fasciculatus_S2_contig8639.16756.1 ID=prot_E_fasciculatus_S2_contig8639.16756.1|Name=mRNA_E_fasciculatus_S2_contig8639.16756.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=107bp MTVTPCDTPETLATALTGAGSKLVVIDFHATWCGPCKRIAPFLAKLSETLback to top mRNA from alignment at E_fasciculatus_S2_contig8639:1137..4851- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8639.16756.1 ID=mRNA_E_fasciculatus_S2_contig8639.16756.1|Name=mRNA_E_fasciculatus_S2_contig8639.16756.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3715bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8639:1137..4851- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8639:1137..4851- >mRNA_E_fasciculatus_S2_contig8639.16756.1 ID=mRNA_E_fasciculatus_S2_contig8639.16756.1|Name=mRNA_E_fasciculatus_S2_contig8639.16756.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=321bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8639:1137..4851- (Ectocarpus fasciculatus EfasUO2)back to top |