mRNA_E_fasciculatus_S2_contig855.16677.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR96_ECTSI) HSP 1 Score: 459 bits (1182), Expect = 8.980e-158 Identity = 227/245 (92.65%), Postives = 232/245 (94.69%), Query Frame = 1
Query: 79 MRMPPVSAFHTTAVWAARYSRLLRIPSCRLKPARRGDTSWFKTTTTTARRDKHTASIQDGRGGHNRGVAAMPKVDGGVACTATMEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNEDERTLKFIGHGGWWTGVVEDFQEARRTRKLR 813
MRMPPVSAFHTTAVWAARYSRLL IPSC LKP RRGD S FKTT A+RDKH ASIQDGRGGH RG+ AMPKVDGGVACTAT+EVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTY+VADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNE+ER LKFIGHG WWTGVVEDFQEARRTRKLR
Sbjct: 1 MRMPPVSAFHTTAVWAARYSRLLGIPSCLLKPPRRGDISLFKTT---AQRDKHMASIQDGRGGHTRGMTAMPKVDGGVACTATLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNEEERILKFIGHGAWWTGVVEDFQEARRTRKLR 242
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V9_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.340e-45 Identity = 83/152 (54.61%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 319 TATMEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNEDERTLKFIGHGGWWTGVV 774
T T + + SPE ME+ G A GDV+LL GDLGTGKTCF+RGF+R DP L VTSPSYLLDNTY+ D + +HHMDLYRL G DL VL IP + T VCLVEWPDRL P RL+V ++A + D R ++ +GHG WW V
Sbjct: 97 TYTSSLMIRSPESMEQLGQLLARGAEAGDVILLIGDLGTGKTCFSRGFIRECAEDPDLLVTSPSYLLDNTYEATDGTM-VHHMDLYRLSGADDLHVLNIPEILSTSVCLVEWPDRLQHLTPSVRLEVRISATSGDCRFVELVGHGEWWQEAV 247
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEU5_9STRA) HSP 1 Score: 151 bits (381), Expect = 6.320e-39 Identity = 76/149 (51.01%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 340 VASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLT--AVNEDERTLKFIGHGGWWTGVVED 780
V +PE+ME GA ++ GD++ L GDLG GKTCFARGFV+ARVGDP L VTSPSYLLD +Y+V DEDL +HHMDLYRL G L + F C+CL+EWPDRLG P RL+V + D R + G W + D
Sbjct: 49 VNTPEDMERFGATLARGSTAGDIIFLTGDLGAGKTCFARGFVKARVGDPYLRVTSPSYLLDQSYEVEDEDLIIHHMDLYRLSGTIGTVPLDLETKFRQCICLLEWPDRLGTDIPEERLEVSIRFEGSGSDTRVVFLEPFGSKWEKKLAD 197
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJ05_TRICV) HSP 1 Score: 143 bits (360), Expect = 4.090e-36 Identity = 76/178 (42.70%), Postives = 98/178 (55.06%), Query Frame = 1
Query: 325 TMEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNED-----------------------ERTLKFIGHGGWWTGVVEDFQE 789
T+ +SV +PE+ME+ GA SGGDV+LL GDLG GKTC +RGFVRAR G G+ VTSP+YLL N+Y T++HMDLYRL+GG DL L + +CL+EWP RLG + P RLD+ +ED R L HG W G ++ +E
Sbjct: 3 TLTLSVPTPEDMEDVGAVLSVGTSGGDVILLGGDLGAGKTCLSRGFVRARTGMEGMRVTSPTYLLSNSYPADGGRTTIYHMDLYRLKGGEDLEPLDMAKTLTDGICLIEWPSRLGESLPPARLDITFRIHDEDIDGEDXXXXXXXXXXXXXXXXATARQLTLRAHGPRWEGRLKALEE 180
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNM5_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.600e-33 Identity = 75/167 (44.91%), Postives = 93/167 (55.69%), Query Frame = 1
Query: 334 VSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAV----NED----ERTLKFIGHGGWWT---------GVVEDF 783
+ + +PE+ME+ GA GD +LL GDLG GKTC ARGFVRAR G ++VTSP+YLL NTY+ D L +HHMDLYRL G DL L + V C+ L+EWP RLG+ P RLD N+D R L HGG W G ++DF
Sbjct: 90 LDIPTPEDMEDLGAVLSMGTGPGDSILLKGDLGAGKTCLARGFVRARTGMADISVTSPTYLLSNTYEADDGALLIHHMDLYRLSGDKDLEPLNMNYVLSNCLSLIEWPSRLGSLTPTVRLDATFKIEDLNPNDDFESKRRYLTLDAHGGIWEERLKLLVSEGFIDDF 256
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SUD7_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.220e-32 Identity = 73/175 (41.71%), Postives = 98/175 (56.00%), Query Frame = 1
Query: 325 TMEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQGGT-DLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNE-------------------DERTLKFIGHGGWWTGVVEDFQE 789
++++S+ + E+ME+ GA GGD +LL GDLG GKTCF+RGFVRAR G L VTSP+YLL NTY+ D + +HHMDLYRL G DL L + V C+ L+EWP RLG + P RL+V +T NE R + + HG W ++ +E
Sbjct: 186 SLQLSIPTSEDMEDVGAIISMGTKGGDTILLDGDLGAGKTCFSRGFVRARTGYIDLRVTSPTYLLSNTYEADDGNTIIHHMDLYRLSGNKEDLEPLDMEHVLTKCISLIEWPSRLGDSAPPERLEVTITIDNEAVKDDSEIVDNDXXXXXVIQARIMTLVCHGDQWESRLKFLEE 360
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9V1_THAOC) HSP 1 Score: 135 bits (339), Expect = 1.950e-32 Identity = 79/167 (47.31%), Postives = 104/167 (62.28%), Query Frame = 1
Query: 325 TMEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQG-GTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLT---AV----------NED--ERTLKFIGHGGWWTGVVE 777
++E+++ +PE+ME+ G ++ GDV+LL GDLG GKTCF+RGFVRA+ G P VTSP+YLL N Y V D +L ++HMDLYRL G G DL L + VFE + L+EWP RL AT+P RLD+ LT AV NED R ++ HG W +E
Sbjct: 73 SLELTIPTPEDMEDIGGLLSVNSLPGDVILLDGDLGAGKTCFSRGFVRAKTGLPDERVTSPTYLLSNAYSV-DSNLKVYHMDLYRLSGNGDDLAPLDLENVFENGISLIEWPSRL-ATKPETRLDITLTIESAVDGDVGQSDDENEDCKSRRMRLDPHGVRWVERLE 237
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Uncharacterized (domain UPF0079, ATPase bacteria n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2V7_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.420e-30 Identity = 78/171 (45.61%), Postives = 95/171 (55.56%), Query Frame = 1
Query: 313 ACTATMEVSVASPEEMEETG-AFFGADASGGDVVLLWGDLGTGKTCFARGFVRARV---------GDPGLAVTSPSYLLDNTYDVAD----EDLTLHHMDLYRLQGGT-DLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNEDERTLKFIGHGGWWTGVVED 780
A +T S SPEEME G + A + G V L+GDLGTGKT ARGF++A G + VTSPSYLLDN Y D + +HHMDLYRL T DL++LGIP V +CL+EWPDRLG P R+++ L A NE RT+ GG W V D
Sbjct: 156 ATPSTYTCSATSPEEMERIGEGLWEAGLAVGHTVFLYGDLGTGKTTLARGFIQAATAGAEAGRGEGGKEVMVTSPSYLLDNVYQAFDAETGDSFPVHHMDLYRLSTETHDLKILGIPAVLVEGLCLIEWPDRLGIHTPSTRVEIWLLAQNEGTRTITVKAVGGGWAQEVVD 326
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CI83_SAPPC) HSP 1 Score: 121 bits (303), Expect = 1.610e-28 Identity = 69/153 (45.10%), Postives = 90/153 (58.82%), Query Frame = 1
Query: 340 VASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRLQG--GTDLRVLGIPGVFETCVCLVEWPDRLGATQ-PVNRLDVHLTAVN-EDERTLKFIGHGGWWTGVVEDFQ 786
++S E ME GA A S + L GDLG GKTCFARGFVRA D + VTSP+YLL NTYD A +L+HMDLYRL D + +G+ F + V L+EWPDRL + P +RL+VH+ + EDER ++ G W + F+
Sbjct: 2 LSSAEAMETFGAGLAAHVSCPSTIFLVGDLGCGKTCFARGFVRAWTDDADMHVTSPTYLLLNTYDDATMARSLYHMDLYRLDSVSAVDAKAMGLEDAFASSVNLIEWPDRLTSDLVPADRLEVHIAYTDTEDERAVELKAFGPSWKSALRWFE 154
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPC8_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.420e-28 Identity = 67/160 (41.88%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 328 MEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYDVADEDLTLHHMDLYRL--QGGTDLRVLGIPGVFETCVCLVEWPDRLGATQ---PVNRLDVHLTAVNEDERTLKFIGHGGWWTGVVEDFQEA 792
+ V + SPE ME GA D+ GDV+ L GDLG GKTCF+RGFVR RV P L VTSP++LL NTY +++ +HHMDLYRL +L L +P V E C+ ++EWP RL P NRL++ + E + G+W + ++A
Sbjct: 105 LHVKIESPEIMESLGAALAKDSVPGDVIFLDGDLGAGKTCFSRGFVRERVQRPRLRVTSPTFLLSNTYFCPQDEVEVHHMDLYRLFTNSKEELEPLDLPRVMEECISIIEWPSRLACYSDMIPPNRLELVFQIDEDTEIRYAQMRPFGYWAERLSMLKDA 264 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig855.16677.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig855.16677.1 >prot_E_fasciculatus_S2_contig855.16677.1 ID=prot_E_fasciculatus_S2_contig855.16677.1|Name=mRNA_E_fasciculatus_S2_contig855.16677.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=263bp MNLRSYTAYLTLVVNCSMRMPPVSAFHTTAVWAARYSRLLRIPSCRLKPAback to top mRNA from alignment at E_fasciculatus_S2_contig855:11809..14877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig855.16677.1 ID=mRNA_E_fasciculatus_S2_contig855.16677.1|Name=mRNA_E_fasciculatus_S2_contig855.16677.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3069bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig855:11809..14877+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig855:11809..14877+ >mRNA_E_fasciculatus_S2_contig855.16677.1 ID=mRNA_E_fasciculatus_S2_contig855.16677.1|Name=mRNA_E_fasciculatus_S2_contig855.16677.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=789bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig855:11809..14877+ (Ectocarpus fasciculatus EfasUO2)back to top |