mRNA_E_fasciculatus_S2_contig855.16676.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig855.16676.1
Unique NamemRNA_E_fasciculatus_S2_contig855.16676.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=3 Tax=PX clade TaxID=569578 RepID=D7FR97_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 5.650e-173
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV
Sbjct:    1 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRB9_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 2.320e-152
Identity = 232/260 (89.23%), Postives = 246/260 (94.62%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQ+E+ME H+KRHGERMD  E+ RK+ ARE HKRSEFAQKVHGIRAKLY +KRFKEKATMRKTI+MHQER NKHAND+AVP GAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPVADDEMFKVLRSGKRK KAWKRMVTKV FVGE FTRK PKYERFIRPTGLRFKKAHVTHPEL+ATFHLDI+GVKKNPSS LYTQLGV+TKGTVIEVNVS+LGLVTQSGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:    1 MPQNEHMELHRKRHGERMDAEERSRKRQAREAHKRSEFAQKVHGIRAKLYHQKRFKEKATMRKTISMHQERDNKHANDEAVPKGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWEVPIPKVKPVADDEMFKVLRSGKRKAKAWKRMVTKVCFVGENFTRKNPKYERFIRPTGLRFKKAHVTHPELQATFHLDIIGVKKNPSSSLYTQLGVITKGTVIEVNVSELGLVTQSGKVVWGKYAQVTNNPELDGCINAVLLV 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V588_9STRA)

HSP 1 Score: 454 bits (1167), Expect = 9.250e-152
Identity = 225/260 (86.54%), Postives = 247/260 (95.00%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQHEY+E HKKRHG RMD  E++RK+ ARE H+RS+FAQKVHG+RAKLY ++RFKEKATM+KT+AMHQERTNKH N+DAVP GAVPAYLLDREGVSRAKVLSNT+KQKRKEKAGKWDVPIPKVKPVADDEMFK++R+GKR+ KAWKRMVTKVTFVG+ FTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHL ILGVKKNPSSP+YTQLGV+TKGTVIEVNVS+LGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:    1 MPQHEYIELHKKRHGIRMDAEERKRKRAAREAHRRSQFAQKVHGLRAKLYNKQRFKEKATMKKTLAMHQERTNKHGNEDAVPSGAVPAYLLDREGVSRAKVLSNTIKQKRKEKAGKWDVPIPKVKPVADDEMFKIMRTGKRRAKAWKRMVTKVTFVGDDFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLQILGVKKNPSSPMYTQLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=3 Tax=Oomycota TaxID=4762 RepID=A0A662Y3D7_9STRA)

HSP 1 Score: 451 bits (1159), Expect = 1.880e-149
Identity = 223/260 (85.77%), Postives = 243/260 (93.46%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQHE+ME H+KRHG RMD AEK+RKK+AREVH+RS+FAQKVHG+RAKLY +KRFKEKA M+KT+A+H ERTNKHANDD +PDGAVP+YLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKP+ADDEMFKVLRSGKR+NKAWKRM+TK TFVGE FTRK PKYERFIRP+ +RFKKAHVTHPELK TF LDILGVKKNP SPLYTQLGVMTKGTVIEVNVS+LGLVT SGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:   72 MPQHEHMEMHRKRHGVRMDAAEKKRKKEAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLALHNERTNKHANDDEIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELKTTFQLDILGVKKNPQSPLYTQLGVMTKGTVIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 331
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=6 Tax=Oomycota TaxID=4762 RepID=W4GLP2_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 3.710e-148
Identity = 221/260 (85.00%), Postives = 240/260 (92.31%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQHE+ME HKKRHG R D  E+ RKK+AREVH+RS FAQKVHG+RAKLY +KRFKEKA M+KT+AMH ERTNKHANDD +PDGAVP+YLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKP+ADDEMFKVLRSGKR+NKAWKRM+TK TFVGE FTRK PKYERFIRP  +RFKKAHVTHPELK TF LDILGVKKNPSSPLYTQLGVMTKGT+IEVNVS+LGLVT +GKVVWGK+AQVTN+PE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRYDHHERARKKEAREVHRRSAFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPSSPLYTQLGVMTKGTIIEVNVSELGLVTTTGKVVWGKFAQVTNNPENDGCINAVLLV 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND8_9STRA)

HSP 1 Score: 438 bits (1126), Expect = 1.890e-145
Identity = 222/260 (85.38%), Postives = 242/260 (93.08%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQ+E+ME H+KRHGER+D  E+ RK+ AREVHK+S+FAQ VHG+RAKLY +KRFKEKA MRKTIAMHQER NKH NDDA+P  A+PAYLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPVAD+EMFKV+RSGKRK KAWKRMVTKVTFVG  FTRK PKYERFIRP+GLRFKKAHVTHPEL+ATFHLD+LGVKKNPSS LYTQLGV+TKGTVIEVNVSDLGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:   11 MPQNEHMEQHRKRHGERLDTEERARKRQAREVHKKSKFAQCVHGLRAKLYNQKRFKEKAVMRKTIAMHQERDNKHGNDDALPKDALPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWNVPIPKVKPVADEEMFKVMRSGKRKAKAWKRMVTKVTFVGPNFTRKNPKYERFIRPSGLRFKKAHVTHPELQATFHLDLLGVKKNPSSNLYTQLGVITKGTVIEVNVSDLGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 270
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THK2_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 2.950e-144
Identity = 215/260 (82.69%), Postives = 243/260 (93.46%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQH+YME H+K+HGER+DR E+ RKK+AREVH+RS+FAQKVHG+RAKLY  KR+KEKA MRKT+AMHQE+TNK AN +  P+GAVPAYL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKPVADDEMFKV++SGKRK K+WKRMVTKVTFVGE FTRKAPK+ERFIRPTGLRFKKAHVTHP+L+ATF LDILGVKKNPSSP+YT LGV+TKGTVIEVNVS+LGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WA33_9STRA)

HSP 1 Score: 432 bits (1112), Expect = 1.660e-143
Identity = 211/260 (81.15%), Postives = 239/260 (91.92%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQHE++E HKKRHG R+D+ E+ RKK+ARE H+RS+FAQKVHG+RAKLY +KRFKEKA M+KT+AMHQERTNK  N+DA+PDGAVP+YLLDREGVS+AK+LSNTVKQKRKEKAGKW VPIPKVKP+ADDEMFKVLRSGKR+NK+WKRM+TK TFVGE FTRK PKYERFIRP+ +RFKKAHVTHPEL+ TF L I+GVKKNP SPLYTQLGVMTKGT+IEVNVS+LGLVT SGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:    1 MPQHEHIELHKKRHGVRLDQPERHRKKEAREAHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTVAMHQERTNKQGNNDAIPDGAVPSYLLDREGVSKAKILSNTVKQKRKEKAGKWSVPIPKVKPIADDEMFKVLRSGKRRNKSWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELQTTFQLAIIGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=9 Tax=Bacillariophyta TaxID=2836 RepID=B8C4B1_THAPS)

HSP 1 Score: 428 bits (1101), Expect = 7.380e-142
Identity = 214/260 (82.31%), Postives = 236/260 (90.77%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQHE+ME H+K HG R D  E+ RK++AR  HKRSEFAQKVHG+RAKLY ++RFKEKATMRKTIA H ER+NKHANDDAV DGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPVADDEMFKV+R+G +KNKAWKR+VTK TFVG+ FTRKAPKYERFIRPTGLR K+A+VTHPELK +F LDILGVKKNPSS LYT LGV+TKGT+IEVNVSDLGLVT SGKV WGK AQVTN+PELDGC+NAVLLV
Sbjct:    1 MPQHEHMERHRKLHGRRFDAEERERKREARSAHKRSEFAQKVHGLRAKLYNQRRFKEKATMRKTIAQHNERSNKHANDDAVADGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWEVPIPKVKPVADDEMFKVMRTGSKKNKAWKRVVTKCTFVGDNFTRKAPKYERFIRPTGLRMKRANVTHPELKTSFQLDILGVKKNPSSSLYTNLGVLTKGTIIEVNVSDLGLVTTSGKVAWGKMAQVTNNPELDGCVNAVLLV 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Match: Ribosome (biogenesis protein NSA2 homolog n=30 Tax=Oomycota TaxID=4762 RepID=H3G9L7_PHYRM)

HSP 1 Score: 422 bits (1085), Expect = 1.840e-139
Identity = 212/260 (81.54%), Postives = 230/260 (88.46%), Query Frame = 1 
Query:   85 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 864
            MPQHE+ME H+KRHG RMD AEK+RKK+AR VH RS+FAQKV            FKEKA M+KT+A+H ERTNKHANDD +PDGAVP+YLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKP+ADDEMFKVLRSGKR+NKAWKRM+TK TFVGE FTRK PKYERFIRP+ +RFKKAHVTHPELK TF LDILGVKKNP SPLYTQLGVMTKGT+IEVNVS+LGLVT SGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHRKRHGVRMDAAEKKRKKEARAVHTRSQFAQKVXXXXXXXXXXXXFKEKAAMKKTLALHNERTNKHANDDEIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELKTTFQLDILGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig855.16676.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Ribosome5.650e-173100.00biogenesis protein NSA2 homolog n=3 Tax=PX clade T... [more]
Ribosome2.320e-15289.23biogenesis protein NSA2 homolog n=1 Tax=Rhizochrom... [more]
Ribosome9.250e-15286.54biogenesis protein NSA2 homolog n=1 Tax=Fibrocapsa... [more]
Ribosome1.880e-14985.77biogenesis protein NSA2 homolog n=3 Tax=Oomycota T... [more]
Ribosome3.710e-14885.00biogenesis protein NSA2 homolog n=6 Tax=Oomycota T... [more]
Ribosome1.890e-14585.38biogenesis protein NSA2 homolog n=2 Tax=Dictyocha ... [more]
Ribosome2.950e-14482.69biogenesis protein NSA2 homolog n=2 Tax=Monodopsid... [more]
Ribosome1.660e-14381.15biogenesis protein NSA2 homolog n=1 Tax=Albugo lai... [more]
Ribosome7.380e-14282.31biogenesis protein NSA2 homolog n=9 Tax=Bacillario... [more]
Ribosome1.840e-13981.54biogenesis protein NSA2 homolog n=30 Tax=Oomycota ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig855contigE_fasciculatus_S2_contig855:6402..11659 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score510.4
Seed ortholog evalue5.1e-142
Seed eggNOG ortholog2880.D7FR97
Model size2501
KEGG koko:K14842
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
Exons6
EggNOG free text desc.maturation of LSU-rRNA
EggNOG OGsCOG2007@1,KOG3163@2759
Cds size783
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig855.16676.1prot_E_fasciculatus_S2_contig855.16676.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig855 8036..11575 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842513.183501-UTR-E_fasciculatus_S2_contig855:6401..80351696842513.183501-UTR-E_fasciculatus_S2_contig855:6401..8035Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig855 6402..8035 -
1696842513.2568977-UTR-E_fasciculatus_S2_contig855:11575..116591696842513.2568977-UTR-E_fasciculatus_S2_contig855:11575..11659Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig855 11576..11659 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842513.1968906-CDS-E_fasciculatus_S2_contig855:8035..81881696842513.1968906-CDS-E_fasciculatus_S2_contig855:8035..8188Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig855 8036..8188 -
1696842513.2054513-CDS-E_fasciculatus_S2_contig855:8591..87651696842513.2054513-CDS-E_fasciculatus_S2_contig855:8591..8765Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig855 8592..8765 -
1696842513.2142303-CDS-E_fasciculatus_S2_contig855:9413..95001696842513.2142303-CDS-E_fasciculatus_S2_contig855:9413..9500Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig855 9414..9500 -
1696842513.223155-CDS-E_fasciculatus_S2_contig855:9915..100931696842513.223155-CDS-E_fasciculatus_S2_contig855:9915..10093Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig855 9916..10093 -
1696842513.232806-CDS-E_fasciculatus_S2_contig855:11026..111461696842513.232806-CDS-E_fasciculatus_S2_contig855:11026..11146Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig855 11027..11146 -
1696842513.2429872-CDS-E_fasciculatus_S2_contig855:11504..115751696842513.2429872-CDS-E_fasciculatus_S2_contig855:11504..11575Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig855 11505..11575 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig855.16676.1

>prot_E_fasciculatus_S2_contig855.16676.1 ID=prot_E_fasciculatus_S2_contig855.16676.1|Name=mRNA_E_fasciculatus_S2_contig855.16676.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=261bp
MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLY
QRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAK
VLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMV
TKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVK
KNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPEL
DGCINAVLLV*
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mRNA from alignment at E_fasciculatus_S2_contig855:6402..11659-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig855.16676.1 ID=mRNA_E_fasciculatus_S2_contig855.16676.1|Name=mRNA_E_fasciculatus_S2_contig855.16676.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5258bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig855:6402..11659- (Ectocarpus fasciculatus EfasUO2)
CATCTTTCTCTTTTCCCTGCTGGCAGGAGGGCACTCTTGAGAGTTGACCG
CAGGGCCAACCTGATACTTGCGCACTAGAGCACCATGCCGCAGCATGAGT
ATATGGAAGCGCACAAGAAGCGCCATGGCGAGCGAATGGACCGAGCAGAG
AAGAGGTAAGGGTGCCACGGCCACGCCATGACTACAGCAGATACTGCCAA
AGGTGTCGCCGTACGTGTAGTATCGCATGCCAGCGTTGCTCATTGAGCCG
CCACGAGTAATACGTTTCCCATCGTTGTAGTAAAGGAAAAGCCGCTGCCT
AACTCTCCATCCTACCACAACAGAAAGATAGTTCATCAGCCCACCTGTTG
TAGACTATTGACTATTGTACCACACAACAGGGTTTAGCGGAGCGGTGGTG
AAAATCGCTGATGATGCCTGGCAATGCCTGGAGACACGGCAGGATCTCGT
TCCCAATGTCTTCTCACCACACCCCCATTCCCCATCATATTTGTGTGCGC
TTTTCCCACACAGACGGAAAAAGGATGCGAGGGAGGTGCATAAGCGATCA
GAGTTTGCCCAGAAGGTCCACGGCATCCGCGCTAAGCTTTACCAGCGAAA
GCGTTTCAAGGAGAAGGCGACGATGCGGAAAACGTACGCATCTCTGTCCA
TCACGGAAGATTTGGTTCATTTGGTAGATACCATGAGTTTATTAGCCCTG
GCTTTGTTCTGCTGCATTCCGTTTTTAGGATCTGTATGCATCACATAAAG
ATGTATAGAACTCTCTAAAAGTGCGCATTGTGTTACGCATCGACATGAAT
TCTTCCTTGCCTTATGTACCTGTGGTCACTCCGTGTTGCTCTGTCGCTTG
GGATTTCCTGCTGTACATCACGCGACCTCACGTGTCGTGGGTACAAACTA
TAGTGGTACACTAATTCGCCTGACCCACAACTACAGGGAGACGCCGCTGA
AGGACGTGGTGTGTGGGAGCTTCCACCTGAGTGGTCTCGGGCTGATGCGT
CCGTAATTCATGCCAAAGGCTGCATCTGGTCTTGCGCCCACACAAGCTAT
TACCTACCGTACGGTTTTGTCTGCAACTGATCGGCTTGGACGTGACACCG
AGGGATTCCTTGGGGTGTTCGGGCCTCTTTTTTTTTGTTCCTCCCCTCAA
ATCTCACGTGCACCATGAATTCACGAACAAGCGCTACTCATTACAGCGAT
TCGCCGTCATCGATCCCGACCTAACCGCTGTAAGGTTTGCAAGTGTCCCA
ACGAAATAGACCAGTTGGCGACGGACCTCAATGAGACAACGTATTCGAGA
AAGACCTTGTTTACAAGCACGACGATGCAACGGTTGCTGGTTTAGCTTGT
GGGTGCGTCCGTTGCCCATGCTATCCACTGGTGTGCACAGGTAGCGGGGG
CAGTAGTTATAGTTCACCATGATGAGTGAAACCGATGGGACCGGTCTGCA
GACGCTCCTCGTTCGATCATGCAGATCTTGTTTACTGATGTTCACCGCCA
AGACTTGGTTCAACAACGCAACACCCTGTACGGTTATGTGCATTACTACG
TTCTATGCTGGACCAGAATCGCAATGCACCAGGAACGCACGAACAAGCAC
GCCAACGATGACGCGGTACCAGACGGTGCCGTTCCTGCGTACTTGCTCGA
TCGCGAGGGTGTTAGTCGGGCCAAGGTTTTGAGCAACACGGTAAAGCAAA
AGCGCAAGGAAAAAGCGGGCAAGTGGGACGTGCCAATACCCAAGGTATGT
GGTCGGGGCCATGGTCGTTTTAGCGCGTTGTGACTCGTTTCACGGCAGGG
AAGCATTTGGAGACCCTCTTGAGTTTTTTCCTGTAATTTTTACTGAACAG
CATCAGCCACTGTCCAGGTGTCTCTTTACGTCAGTGACAAACTTGTGTTT
TTTTTCTCCTGTTTCAAACCTAACGCAGGTACTGCCATTTCGAATTCAGT
TTAAGCAAATCACCGCTGTGGCTCACACGTGTTCGATCGGCTCCTTGCGC
TCCATTTCAGGCAGAAATGACTTGCTGTATTGCGATGCATTCTTCGTTTT
ACCCCGTGTACAAACTCACCAGAGGTACTTCTCAATTCAGGGGCATCCCC
CATGGTATTCCTCGTGGTAGGTCGTTCATCTTTTCCACTTATGATCTCCT
CATACACAGGTAAAGCCAGTGGCCGACGATGAGATGTTCAAGGTTTTGCG
AAGTGGAAAGCGCAAGAACAAGGCATGGAAACGCATGGTGACGAAGGTAC
GATGGACCTTGTGTCGCCTGTACGTACGTCCTTTGAACAGCTTTTAATCG
TCTGACCCGGGGCTTTTTTAGCTTAATTTGGTTGGGGGATCCACTCAGAT
GAAACGGTGTTTTGGTGATATACTTGTGGGGAACCCCAGATACTCGCTGC
CCTCTGGATCGATTATTTCATTTGAAATTGATATTTAGGCGCTTGTGAAT
GCGTTGGGGTGGTGTAACGGACCCTCAGTCCGAGGCCAGCGCACGGCTTA
AAAGATTGCAAACTCAACTCTGAACACAAGAGGAGCCAAAAACAGAAAGA
AACGTTCGACGTTTTCGTCGGTCAAAAGTTGTACATGTGTGTTTCACCAT
CCAGCTTGCTTCGGTTGCTCCGAGAAAGGGCGTATCTCGTACCTATCTCA
ACTGAAGTGCCCGGATCCGGTGAAACACAGAAGACGTCCTACGCGGCGCA
TGCTGTAGTATAGTCCCGAACTCACAGATTGTTCTTCTAGAACGCAAACA
AACATGAAATCCAACCGAGCACGGTTGGCGACAACTCTCGGCACCCTCCG
TTGTGCGCGGTAGGAGTGTGTTGTCGTTTTCCTCGGTAACCAAAGGTTAT
GCGTGTGTATTCTTGCGCGTTTGCACTGGAATTCCGTGTCGCAGGTCACT
TTCGTCGGCGAGGGCTTCACACGGAAAGCACCCAAGTACGAACGGTTTAT
CCGACCAACGGGTCTCCGATTTAAGAAGGCCCACGTAACACACCCCGAGC
TGAAGGCGACCTTTCACCTTGACATCCTTGGGGTAAAAAAGAACCCGAGC
TCGCCTCTCTACACTCAGGTATGCATATCATGTGGACAGCCTAAATTTGC
CGCGCCGTATTTGATGTGTTAAGTCCATCGTGGAGAACAGGACAGCGTTG
GCGTTGGCCATGATGCCTTGTAGTCCGAGTTTTGGCACATCACCAGTGCT
TGCCTCTGCCAAGTGCACAAAGAAGAATTTGGCTTCAACCTTCTTTTCAG
TCGGTTTCCGAAGTTCAGCGCTGAGACTTATCCCCGAGGAACGATCGTGC
AGGGTTCATTACCGGGTCTGGAAATGGGCACACTGACCGTTTACACCATT
GTAGCGTCGTAGAGACCATACGCTCGAACGGTGAGGTGTGGTTTCCGTCC
CTCCTCGTCTGAAAACTCTCGCTGGTTTTATCTAACACCTCTGCATTTTA
TTTTTGGTCCCTTTTCGACAGCTTGGAGTCATGACCAAGGGCACCGTCAT
CGAGGTCAACGTAAGCGACCTTGGCCTGGTGACCCAAAGCGGCAAGGTCG
TCTGGGGAAAGTACGCGCAAGTTACAAATTCGCCGGAGCTGGACGGGTGT
ATCAATGCGGTGCTGCTTGTGTAGGGCTATGTTTTGCTATTTTTTTGGAG
TGTAAGCTCACGTCACCTCACGTTTGGATTCGTTCCCCTGCAAAACATCG
GTGACGCTCGCGTTGGTCGAATTTGACTAAAGAGTAGGGTTACTTCCTGT
TATCATGCCGTTGCTTTCGTGGCGAAACGCTTGCACCCTCCATGCAGGAG
GCATCGCATGTACCCCCCCTTTTCATCGTGCATCCTTCGTTTTCGCTCGA
AATGTCGAGAAGCCTATCTTAGAACGAAAGCCGTGCAGAGAGGCAATCTT
GCCACCACGGTAGCACCGCTTGTTTTTTACGAGTCGCATAGCTTATTCCC
TTGGCACGGCAATCAACGGTTGGTCTACATGTAGGATGGTTGGCCGTAGT
CAAGGTGGTGCTCAATGCCTCTGAAGCTTGTAAAGTCAAAACTGGGGCTC
TTGATCGAATTTCGTTCGTTGGTATCTAGGCCTTGTTCTCGTCGTTCTTT
CCGGAAAAAGTATCTGTGTTGCAACTGCATGTGTGAGTTGCAAATTTCCG
TACTCCCCAGGTTCTTCCTTGCAACATAACAGCAGGCCTTGTCACTTCTA
TGGGTGACCCGTTCTAGGTTGGTGATCGTGGACCGGTCGCATGCATGCCG
CTGAGAAGTTGAGCTCTCTGACCTGTGTGTGAGCCGGACAAGGTATCTCA
TCTCTAGTTTGATGCGCGCTGATGCATTTTTCGCGAACTGGCGGATGCGC
TTTGACAGTGTATGACTTCCCGGGCGCTGCGTGCAAAATTGGCGTATTTT
CGTGGATTGTTTGTGCTCTCGATTGGTGTTGGAGTGCACAGCAGACACCA
TAGCCCCCCTACCCCCCACCAAGTGCAGTGATGCTGGGGATGAGAAAGAG
AGTTGAAAATTGCATGTTGGTATCTTGCTGGCTGGCTGTTTGGCGCGTTG
CCGATTCAGGAACATGGCAGAAAGAATATGCTTGCATTTAAGGAACACCT
GGCATTGGGAAAAGGATCAAGGACGGAAGATGTTATTGCCCCCTTCGCTC
ACCTCTTCATTTTGATGGTGGTTGGCGTCCAGTTTGAATTCGGACCAGTG
TTTTGTTGCCTTTGGTTACCTTGAGAATCGTTGACCTCTTTACAGTATTA
CCCCAGTACTTTCGTTTAAGTAACGGTGGCGTGTATGTACGTGCTTTGAA
GTATGTCAAGCCGGGAATTTCCGTGGTTGGAAGCGCTTTGCAGCATATGA
GCCCATCAGGACGGACCACCAACACCCACCCAAAACGGAGCGTTTTCAGC
CCATCCGGTGGAACCCTGTCTCGCTAAACGACCAACATACAATATGTAGT
TGAGGCCCTCTCAGCCCGTCGGGGATAACTGCTTGGGCGTTTCTTTGCGC
CATTTCCTTCGCGTTAATTCTTTTGGCCTTGCCATCGTCGCCACCATGGT
TTCAAGGTCTCCATTGCGGTCTGAACGTCGTCATCCTTTGGTTACTTTGT
CCTTCCTGTGTCTCGTGCTCGAGGGTGTTACCCTGTGAGCAGTTGCGGCT
TCCCGTAAAAAACACAAAGCCTTCAGACAGGCAACGCCGACGAAACTCGT
CGAGGAGTTGCACATCAATTAAGTACAATGTCAAACGGGGAATTTCAGTG
GTTGCAAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig855:6402..11659-

>mRNA_E_fasciculatus_S2_contig855.16676.1 ID=mRNA_E_fasciculatus_S2_contig855.16676.1|Name=mRNA_E_fasciculatus_S2_contig855.16676.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=783bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig855:6402..11659- (Ectocarpus fasciculatus EfasUO2)
ATGCCGCAGCATGAGTATATGGAAGCGCACAAGAAGCGCCATGGCGAGCG
AATGGACCGAGCAGAGAAGAGACGGAAAAAGGATGCGAGGGAGGTGCATA
AGCGATCAGAGTTTGCCCAGAAGGTCCACGGCATCCGCGCTAAGCTTTAC
CAGCGAAAGCGTTTCAAGGAGAAGGCGACGATGCGGAAAACAATCGCAAT
GCACCAGGAACGCACGAACAAGCACGCCAACGATGACGCGGTACCAGACG
GTGCCGTTCCTGCGTACTTGCTCGATCGCGAGGGTGTTAGTCGGGCCAAG
GTTTTGAGCAACACGGTAAAGCAAAAGCGCAAGGAAAAAGCGGGCAAGTG
GGACGTGCCAATACCCAAGGTAAAGCCAGTGGCCGACGATGAGATGTTCA
AGGTTTTGCGAAGTGGAAAGCGCAAGAACAAGGCATGGAAACGCATGGTG
ACGAAGGTCACTTTCGTCGGCGAGGGCTTCACACGGAAAGCACCCAAGTA
CGAACGGTTTATCCGACCAACGGGTCTCCGATTTAAGAAGGCCCACGTAA
CACACCCCGAGCTGAAGGCGACCTTTCACCTTGACATCCTTGGGGTAAAA
AAGAACCCGAGCTCGCCTCTCTACACTCAGCTTGGAGTCATGACCAAGGG
CACCGTCATCGAGGTCAACGTAAGCGACCTTGGCCTGGTGACCCAAAGCG
GCAAGGTCGTCTGGGGAAAGTACGCGCAAGTTACAAATTCGCCGGAGCTG
GACGGGTGTATCAATGCGGTGCTGCTTGTGTAG
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