mRNA_E_fasciculatus_S2_contig8504.16638.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8504.16638.1
Unique NamemRNA_E_fasciculatus_S2_contig8504.16638.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI)

HSP 1 Score: 606 bits (1563), Expect = 1.250e-215
Identity = 342/402 (85.07%), Postives = 353/402 (87.81%), Query Frame = 1
Query:    1 MAMMVCSLPECYRPRHQRRGVVHDFCSRTHAQEAADMGLIPPLHRPHGRCHVCQLHGCNAEVFFDEDTNRVXXXXXXXXXNMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRCAYTCGAQHLVGQLKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERSLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNVAWHG-ARCRRSGY 1203
            MAMMVCSLPECYRPRHQRRG++HDFCSRTHAQEAADMGLIPPLHRPHGRCHVCQLHGCN EVFFDE TN VXXXXXXXXX MARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   GSRCAYTCGAQHLVGQ+KCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEER+LTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKP+DGLSVERIFKVQVPGDVRQKHKV+E+ATNN RRRFHGTSCSDAC+FF+DL+GGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYA QSEKV+ L   V W G AR RRSGY
Sbjct:    1 MAMMVCSLPECYRPRHQRRGIIHDFCSRTHAQEAADMGLIPPLHRPHGRCHVCQLHGCNTEVFFDEATNTVXXXXXXXXXXMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWMDHRSGDQLAFC-GSRCAYTCGAQHLVGQMKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERNLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEKVY-LPFQVEWRGVARRRRSGY 400          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE)

HSP 1 Score: 471 bits (1211), Expect = 6.840e-163
Identity = 271/342 (79.24%), Postives = 280/342 (81.87%), Query Frame = 1
Query:  154 VCQLHGCNAEVFFDEDTNRVXXXXXXXXXNMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRCAYTCGAQHLVGQLKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERSLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNVAWHG 1179
            VCQLHGCNAE+FFDEDTN V         NMARARGQWPRPGMQGSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   GSRCAYTCGA H VGQ+KCSLPGCNDFTMLHDRTMDDMGYC DYHRIKAEER+LTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQA+SSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVR KHKV+E+ATNN RRRFHGTSCSDAC+FF+DL+GGPCGRPDCNVCSICTHGFRLRGS GRTAQRTNM LRYGEGLYFSSVSGKANDYA QSEKV    R   W G
Sbjct:   22 VCQLHGCNAEIFFDEDTNTVHDFCCRRHANMARARGQWPRPGMQGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWMDIRSGDQLAFC-GSRCAYTCGAHHFVGQMKCSLPGCNDFTMLHDRTMDDMGYCRDYHRIKAEERNLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEKV----RMPLWSG 358          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 6.580e-93
Identity = 168/389 (43.19%), Postives = 210/389 (53.98%), Query Frame = 1
Query:   13 VCSLPECYRPRHQRRGVVHDFCSRTHAQEAADMGLIPPLHRPHGRCHVCQLHGCNAEVFFDEDTNRVXXXXXXXXXNMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRCAYTCGAQHLVGQLKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERSLTQNPEAHVDRTFRGGPSD--DFKLSVLTKSHQAYSSLKEQFLVKFQKP--IDGLSVERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNV 1167
            +C +PEC RP H    VVHDFC RTHA+EA   G+ P L RPHG CH C+L GC+  V+FD     VXXXXXXXXX    A GQW R    G++                                                                        SRCA   G Q       C L GC++  + H +T + + YC + HR++ E+++L  N + +V+R F  G +   DFKL VL+K+H  Y SL +QF+ K+ KP  + G+SVE+I  V+VP DVR+K K YE+   N RRRFHGTSCS  C FFVDL+G PC    C VCSICTHGF L+G+VG TA+RTN  LRYGEGLYFSSVSGKANDYA  SEK  +  R +
Sbjct:   10 LCGIPECTRPCHDGGTVVHDFCGRTHAEEAVSRGIRPSLRRPHGNCHECKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNT---------NAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANTRECLRKGCTSTAWLANIEGPQYCSSRCAIDDGGQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRL 389          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: PARP (catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 1.020e-84
Identity = 162/399 (40.60%), Postives = 205/399 (51.38%), Query Frame = 1
Query:   13 VCSLPECYRPRHQRR-GVVHDFCSRTHAQEA---ADMGLIPPLHRPHGRCHV---CQLHGCNAEVFFDEDTNRVXXXXXXXXXNMARARGQWPRPGM---QGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRCAYTCGAQHLVGQLKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERSLTQNPEAHVDRTFRGGPS--DDFKLSVLTKSHQAYSSLKEQFLVKFQKPI--DGLSVERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNV 1167
            +C+LP+C  P  + + G VH +CSRT + EA   A    +    R  G       C+L GC+  V+ DE + RV         N A A G+   P      G                                                                         GSRCA   G  +LVG   CSLPGC +   +H R   + GYCC+ HR++A +RSL  NPE  VDRTFRGG +  DDF+LSVLT  H  Y S K+QF+ K++KP+   G+SV RIFKVQVP D+R++ +       N +RRFHGTSCS+ C FFVDL+GGPCG   C VC+ICTHGF+LR +VG TA+RTN +LRYG+GLYFSSVSGKANDYA  SEK     + V
Sbjct:   11 LCALPDCQSPCFEDQDGFVHSYCSRTCSNEALARAKWASLRSSSRNRGGGSDGSRCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCSRAAWVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKV 409          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 4.040e-73
Identity = 181/386 (46.89%), Postives = 222/386 (57.51%), Query Frame = 1
Query:   16 CSLPECYRPRHQRRGVVHDFCSRTHAQEAADMGLIPPLHRPHGRCHVCQLHGCNAEVFFDEDTNRVXXXXXXXXXNMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRCAYTCGAQHLVGQLK-----CSLPGCNDFTMLHDRTMDDMGYCCDYHRI--KAEERSLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKP--IDGLSVERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKV 1146
            C +PEC RPRHQR G+VH+FC RTHA EA   GL   L RPHGRCHVCQL GC+  V+FD DT RV XXXXXXXX     RG W                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               C+  C ++  +   K     C L  C+  T+ H +T +D+GYC + HR+  K   +   ++ E +V   +  G +  F L  L ++H    SL+ QF  K+ KP   +G+SV RIF+V+VP +VR KH  Y +   N RRRFHGTSCSD C F VD +  PCG   C++C+I   GF+L  +VGRTA   N NLRYG+G+YFSSVSGKANDYA  + K 
Sbjct:   10 CDIPECTRPRHQRAGIVHNFCGRTHAMEAVSRGLAAKLDRPHGRCHVCQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDW------------------IPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKERLVLNKHAGSVCKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVG-TPRFNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKT 376          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 3.130e-55
Identity = 108/215 (50.23%), Postives = 138/215 (64.19%), Query Frame = 1
Query:  547 VGQLKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEE-----RSLTQNPEAHVDRTFRGGPSD--DFKLSVLTKSHQAYSSLKEQFLVKFQKPIDGLS-VERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNV 1167
            +G  +C L GC+        T  +  YC   H+  A       R++T    +HV + FRGG +   DF LSVL+KSH  YSSL  QF+ K+ K   G+  V RI +V+VP D+  K+  Y++A  N RRRFHGTSCS  C FFVDLKG PC    CNVC+ICT+GF L+G+VG TA+RT++ LRYGEGLYFSSVSGK+NDYA  SEKV +  + V
Sbjct:   21 MGASECKLKGCSKNVYRDPVTGLESDYCSRGHQAHAIALGQGMRTVT----SHVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVK--GGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKV 229          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 6.750e-53
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 1
Query:  682 EAHVDRTFRGGPSD--DFKLSVLTKSHQAYSSLKEQFLVKFQKPIDGLS-VERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNV 1167
            ++HV++TFRGG +   DF LS L+K+H  Y SL  QF+ K+ KP  G+  V RI +V+VP D+ QK   Y++A  N RRRFHGTSCS  C FFVDLKG PC    CNVC+ICTHGF LR +V  TA+R N   RYGEGLYFSSVSGK+NDYA QSEKV +  + V
Sbjct:    5 QSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKP--GVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKV 167          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS84_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.020e-39
Identity = 89/210 (42.38%), Postives = 118/210 (56.19%), Query Frame = 1
Query:  550 GQLKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERS------LTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKF--QKPIDGLSVERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGGP-CGRPDCNVCSICTHGFRLRGSVGRTAQRTNMN--LRYGEGLYFSSVSGKANDYAVQSEKV 1146
            G+  C LP C     L   T   + +C + HRI   +R+       +  P            S   KL  L + H  + SL +QF  K+   KP  G+ V  + K++VP DVR++H+ Y+ A  N RRRFHGT  S +CQF+V   GGP C RPDC +CSICTHGF L  +VG +  R N    L YG+GLYFSSVSGKAND++ ++EKV
Sbjct:   55 GEAYCRLPDCPQ-KALPCGTWRSLSFCSEAHRIFFAQRAPVPFRQWSAEPYTTHVMVAHQTTSSPLKLHFLDEGHPTHKSLADQFTSKWLHSKPKRGVEVLNVIKIEVPRDVRERHEDYKTAVPNVRRRFHGTFASSSCQFYV---GGPICLRPDCGLCSICTHGFELGDNVGESPARGNKIHWLMYGKGLYFSSVSGKANDFSAETEKV 260          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 5.650e-36
Identity = 67/154 (43.51%), Postives = 103/154 (66.88%), Query Frame = 1
Query:  718 SDDFKLSVLTKSHQAYSSLKEQFLVKFQKP--IDGLSVERIFKVQVPGDVRQKHKVYEQATNNNRRRFHGTSCSDACQFFVDLKGG--PCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNV 1167
            S +  L +L ++ + Y++L+  F  ++ KP    G+S+ER++ +QV  ++R+KH+ Y+    N  +RFHGTSC++ C F VD +GG  PCG+  C+VC+IC  GF+L  +V  TA+ T + LRYGEG+Y +SVSGKANDYA +S K   +A  +
Sbjct:   12 SSESVLQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASEL 165          
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Match: TRUD (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.660e-35
Identity = 177/419 (42.24%), Postives = 205/419 (48.93%), Query Frame = 1
Query:   73 FCSRTHAQEAADMGLIPPLHRPHGRCHVCQLHGCNAEVFFDEDTNRVXXXXXXXXXNMARARG-------------------QWPRPGMQGSS---------------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRCAYTCGAQHLVGQLKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERSLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDV---------------RQKHKVYEQATNNN--------------------RRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKAND 1122
            FC RTHA EA + G+IP L  PHG CH C+L GC+A VFF+ DT RV           A A                     Q   PG   ++                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  CSLPGC     L  R    +G   D      E   +T  P A       G     F+LSVLT++H  ++ ++EQFL K+ KP    SV R+FKV+VP  +                + +  Y+Q   N                      RRFHGTSCS  C FFV+ K GPCG  +C VC ICTHGF +  S G TAQRT  NLRYG GLYFSS+SGK  +
Sbjct:  753 FCGRTHAAEAVERGIIPALAPPHGHCHECKLPGCSATVFFESDTGRVYDYCCRAHAYQAGALSGRSGSXXXXXXXXYAAHGPQCALPGCARAAYVDPTSNHAHDYCGRTHAREHAQMLSDGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRDCSLPGCAKPRWLDPRA--GLGPILD---AGVERVFVTSRPNAV------GSADTGFQLSVLTRTHADFAPVREQFLSKWTKPGAPPSVVRVFKVKVPDHMFSXXXXXXXXXXXXXXRAYDAYKQLKGNRVRRFHSLAXXXXXXXXXXXXXRRFHGTSCSADCNFFVNFKDGPCGGHNCAVCGICTHGFLMEYS-GATAQRTKFNLRYGRGLYFSSISGKTEE 1159          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8504.16638.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.250e-21585.07protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.840e-16379.24protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
PARP6.580e-9343.19catalytic domain-containing protein n=1 Tax=Ectoca... [more]
PARP1.020e-8440.60catalytic domain-containing protein n=2 Tax=Ectoca... [more]
PARP4.040e-7346.89catalytic domain-containing protein n=1 Tax=Ectoca... [more]
PARP3.130e-5550.23catalytic domain-containing protein n=1 Tax=Ectoca... [more]
PARP6.750e-5358.18catalytic domain-containing protein n=1 Tax=Ectoca... [more]
Uncharacterized2.020e-3942.38protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
PARP5.650e-3643.51catalytic domain-containing protein n=1 Tax=Ectoca... [more]
TRUD3.660e-3542.24domain-containing protein n=1 Tax=Tribonema minus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8504contigE_fasciculatus_S2_contig8504:127..5322 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score293.1
Seed ortholog evalue2e-76
Seed eggNOG ortholog2880.D8LS87
Model size1233
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs28J37@1,2S14A@2759
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-12_004140.1
Cds size1233
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8504.16638.1prot_E_fasciculatus_S2_contig8504.16638.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8504 127..5322 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842509.840754-CDS-E_fasciculatus_S2_contig8504:126..3961696842509.840754-CDS-E_fasciculatus_S2_contig8504:126..396Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8504 127..396 -
1696842509.8542397-CDS-E_fasciculatus_S2_contig8504:801..9181696842509.8542397-CDS-E_fasciculatus_S2_contig8504:801..918Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8504 802..918 -
1696842509.8646443-CDS-E_fasciculatus_S2_contig8504:1340..15171696842509.8646443-CDS-E_fasciculatus_S2_contig8504:1340..1517Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8504 1341..1517 -
1696842509.8757224-CDS-E_fasciculatus_S2_contig8504:1965..21731696842509.8757224-CDS-E_fasciculatus_S2_contig8504:1965..2173Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8504 1966..2173 -
1696842509.8894424-CDS-E_fasciculatus_S2_contig8504:2677..27871696842509.8894424-CDS-E_fasciculatus_S2_contig8504:2677..2787Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8504 2678..2787 -
1696842509.9017053-CDS-E_fasciculatus_S2_contig8504:3594..37921696842509.9017053-CDS-E_fasciculatus_S2_contig8504:3594..3792Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8504 3595..3792 -
1696842509.9117968-CDS-E_fasciculatus_S2_contig8504:5169..53221696842509.9117968-CDS-E_fasciculatus_S2_contig8504:5169..5322Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8504 5170..5322 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8504.16638.1

>prot_E_fasciculatus_S2_contig8504.16638.1 ID=prot_E_fasciculatus_S2_contig8504.16638.1|Name=mRNA_E_fasciculatus_S2_contig8504.16638.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=411bp
MAMMVCSLPECYRPRHQRRGVVHDFCSRTHAQEAADMGLIPPLHRPHGRC
HVCQLHGCNAEVFFDEDTNRVHDFCCRRHANMARARGQWPRPGMQGSSVC
QYPGCNEWVYRNPETGEESAFCSRSHFEAAQDQGAQPAAEEEPLTVCHNA
RCQRPAWMDHRSGDQLAFCGSRCAYTCGAQHLVGQLKCSLPGCNDFTMLH
DRTMDDMGYCCDYHRIKAEERSLTQNPEAHVDRTFRGGPSDDFKLSVLTK
SHQAYSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRQKHKVYEQATNN
NRRRFHGTSCSDACQFFVDLKGGPCGRPDCNVCSICTHGFRLRGSVGRTA
QRTNMNLRYGEGLYFSSVSGKANDYAVQSEKVHALARNVAWHGARCRRSG
YQGYLSRLLL*
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mRNA from alignment at E_fasciculatus_S2_contig8504:127..5322-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8504.16638.1 ID=mRNA_E_fasciculatus_S2_contig8504.16638.1|Name=mRNA_E_fasciculatus_S2_contig8504.16638.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5196bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8504:127..5322- (Ectocarpus fasciculatus EfasUO2)
ATGGCGATGATGGTGTGCAGCCTGCCGGAGTGCTACCGGCCTCGCCACCA GCGGCGGGGTGTTGTCCACGACTTCTGTAGCAGGACCCACGCTCAAGAGG CCGCCGACATGGGGTTGATCCCTCCGCTCCATCGTCCTCACGGCAGGTGT CATGTGAGTCTTGAGCAAGAGTCATGAGAGTCCGCCATGAGGCCGCCGGC ACGACAAAAGACAGAAGGAAGGGTGCCCAGACAACGAGATTGCAGAATTA GCTGCGCCATGCAGCATTTTTACATGCATGCTGATGAAGTGTGCATACGT GCATGTTTGTGCGCAAAGATCACAGCAACAGCAGCAGCAGCAGCGAGAAC AAGCCGACCTCCACGAGCAGACCAGAAACTGCTGAAAAAGGATATGGAGT AGGAGGTGCAATAGTCTACTGCTGGAGCGGTGTGCGGTACTGCTGTAACA CTACAGCAGTTGATTTCCAAAATATTTCTGTCATCTTGCATGTGCATGTG GGACTAAACTAAATACGGAGTACATACCCAACACCTGCATGCTACAGCAG GTTGCGTACCATTCACTCGGGTCTCTTTTAGTCTACAACGCAGCAGCGGA GTAATTAGTCTGGTTCCACTATTTTGCAGTATTGCTGTATGCATAGGAGG TCGCGGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGAGG GTTTGAGTAGTATACAATTTGCAGTGGAATTTGCAGTGGAAATGGCGGAA ATCGATTATTAATAGTAATTCCGTGAGCATGACCGTACAGTACATGTATT TGACGCGGAGGAGATGAGGGCATGGTTACACGGTTACACGCAAGCGCAAT CGAGAATCAACGCCGCTCTTGTACACATGTCGAATCTGGCTGATAACTTC GCGAGTGCCCAGTATGAGCGAGATTCGCTTGCGTTCGGAGCTTAGTTTGC GGAGTGCCGCCCCATGCAACACGTCCACCTTTCCGAGATTGCACGTCGGA CACAGGTTTAGTTTTTGTTTACTAGGTATTTCTGTGCCGGGCGTAGCACA TGGTTCACGAAATAGTGCTCGCCGAACTAATTGTCGCTAAAGCAACTGCA GACAGTAGTGCTAACGACTTGGTAATCCAGATATGCATCAAGTGCCCGTT GATCCTCGTATCCTATGTAACTCTGGGCGTTAATAAAGAGTTGGAACTCG TTTTAAGAATCGTCTGGAACGAGATAGTCCAATCTCTGAATGTGTCCATA TTGAAGTATTTTCAAAGACCCGAAACAACTTCTCTCGTCCGCCACGGCGA CCCTTGCGCGCGCCGCATGACGTTAGAGACAAACGCCTGATGCAACAGCA GTCTGGCAGGCCCTGGCTCGCTTTCCCTACTGTACGGGCGTACGTCTGAA CTCTCGTACGCAAACACACGCACGCCGATAGAAGGGAACTCCGCAACTTG ACTCGCCGTCCGCTGCCCCCCGCCTCCTGACCCCCCCCCCCGCCCCCGCC CCCCTATCCTGGAACCTCACTGCTTTTTAGGTCTGTCAACTCCACGGCTG CAACGCGGAGGTGTTTTTCGACGAGGACACCAACAGGGTGCACGATTTCT GCTGTCGCAGGCACGCCAACATGGCGAGGGCTCGCGGGCAGTGGCCCCGC CCCGGGATGCAAGGCTCCTCTGTCTGCCAGTATCCCGGCTGCAACGAGTG GGTCTACCGCAACCCGGAAACGGGAGAGGTCAGCGTGTTCCTGCTCTTGC GGTAAATAGTCAAATGTTTTTGGAGGGGTACGGGGGGGGGGGGGGGGGGG GGGGGGGTTTTTCTTTTGTATGTTTTGGTGGGGTTGTTTTTTCACGCAGT TTTTTTTTTCCCTCGGTTTTGGATGACCAACGGTNNNNNNNNNNGGGGGG GAGGGGGGGGTGGTGGGGGTGGTGGGTGTGGGGGGGTGGTGGGGTGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGTCTTT CCTGTGCATGTGTCTCGTGGACTTGATTCTCACGCATGTATGTGCTTGCC GACGGATTGAGCAGACCAACGTGTGCCGGTACATACCTCCGACTACTGTT GTGTGCACGCGCGTGCGTGTTTGATCCTTAGCATCAACCAGGCTACTACT GTATCCGGGTGGGACTACAAAAGTTGTTGCGATAGACCGCTAATAATAGC GACAAGGTACAAAGGTAACATCATTTCCACGACCCTTTGTACCCGAGAGA CACCTGCACCGCTCTGCGTTCTAAAAACATGCCACGGGATTTCGAGCATG GTCGGCCCGCCGGGGAAGTGGGCTGTGCGGGCGGAAGGTGTCCCCCGAGA AAAACACGCATCAACTCTGGGTTTTGCGGTGTGTCGGTGTTGCTACGCCT CAATCGGTTCGTTGTCGTCACAAGCGACCCGGGGCAGCTTTTTCGTCTCC TCACTTTCGCTGTCGGCTATTGTAGCTGCTACCGTGTTGACGTGGTCTGC CCTGTCTACTGCTGTGTTATGTGTCTGTCCCTCAGGAGTCTGCGTTCTGC AGCCGCTCCCACTTCGAGGCCGCGCAGGACCAGGGCGCGCAGCCTGCAGC GGAGGAGGAGCCCTTGACCGTCTGCCATAACGCTCGCTGCCAAAGGTACT GACGCGAACGAAAGCGAAGACCGGGGGGGGGGTCGGACCGCTATGGTGGC GTGTGTCAAAGAATGCAGGGTTGCATGCATGTATTTTCTGAATTTTCTTG TGCGTGCCAAGAGTATGGGCACACCTTTGATGTAGACCAACTTGTAAGCG GCGGGAAATTGAATGCTGCTGCTGTTGGAAGCGTTCGGGATCAATTTTTG TCGGGGAAACCTCCGTGGCACTTGAGCGTGTCTGTGGCAAATACGCGTAG CCGCCGCAGTAGCAGCAACAGCAGCGCCATGTGTACCGCCAAGGACATGA GAGCTCTCCGCATGCCGTTGTTCTCTGCCTCGGCTCAGGGTTTACAGAGA TCGATCACGTGGCGGAAAACGGCCAAGACCTGCTTCCTTTGTTGTATTCC GTCGATGTGTTAGTTGGAACCCCCCCCCCCCTCCCAAGTGATGGAGATAA TCTAAACAAGCAATTTCCCGTACCGCCAACGAAAAAAAACACAACCTAGG CCGGCATGGATGGATCATCGGTCGGGCGATCAGCTCGCCTTCTGCGGCAG CCGCTGCGCGTACACCTGTGGCGCGCAGCACCTAGTCGGGCAGCTGAAGT GCAGCTTGCCGGGTTGCAACGACTTCACCATGCTCCACGATCGCACGATG GACGATATGGGGTACTGCTGCGACTACCACCGTATCAAGGCTGAGGAGCG GAGCCTGGTGAGCGAGGGGTGCTTTTAACGATATGTGACTTCAGGAAAGT GGTTTTGAAGAGGGTACATGTATTGGGGGGCTGTTGCCATGGTGTCGAGA GCCGGCAGGTGGCGTCGGCGCACCCGTTTCTGCTCCTCGTAGACTCGTAG AGACATGTCCAAACCTTTAAGTGGGGCTTGCGGTTGACAGGGGAAGGGGC ACTGTAGTGTTCGGCAGAATGAGGGGGGGGGGGGGGGGGAGAACTAGTGG GGGGCGTTTACAAAGAGCAGAGGGAGACAAAACACGGTGAAGTTGGCACA CAAGTCGAGAGGACGGCGATACTAGGTCCCCGAATACCCACGCAAGCGTT TTGAGACCCAGATCTCAACCGCCGAAGAGCTTGCCTCACTTGGGACCCCT CTAGCCACGCACCACGTCTCGCTTTTCTAAAAGCTTGTGTTTTTCCCTTG TCCAGACTCAAAACCCCGAAGCTCACGTGGATAGGACGTTCAGGGGTGGG CCCTCGGATGACTTCAAGCTCAGCGTCTTGACGAAATCGCACCAGGCGTA CTCGTCGCTCAAGGAACAGTTCCTTGTGAAGTTTCAGAAGCCTATCGACG GGCTCAGCGTGGAGAGGATTTTCAAGGTCCAGGTAAGCGGTTTCGCGATC GATCGCGTCTGGAAGCTTGTCTATGTAATGCTTGGTAAGTTGTGTTTTTG AGGAGAAGGGCATGGTGTCAAAAGAGGTGCTGGATGCGGTCGTTGAGGTT ACGTCTATGTTCCTGCATGAGACATACGAACAAATATGACAGAAATACAG AGAGGGGGGGGGAGTTACTGTAGTCCTGTGGTGTTGGCGGTAGTAACTCG GATGATGAACATGATGATGATGGTCTGTATATCTTCTTCTACTATTTGAT ATTTCGTGTTTCGCACATAGTCCAAGGCGCGTTTGGTGTGGAGATAGAAT ATACTATTGAGGGCATCCACAAACGGCAACGTACGAAGCCTTGCTCTTGG GTGCGATGTGACGATGTGACGATGGCCGGTTTCAACTTTCACCTTCATCC CCAGGTTCCGGGGGACGTACGCCAAAAGCACAAGGTCTACGAGCAGGCGA CCAACAACAACCGTCGCCGCTTCCACGGCACCTCTTGCTCCGACGCTTGC CAGTTCTTCGTGGACCTCAAGGTATCTACTGTAGGACAAAGACCGACCGC TCCTTTGGAGGGGCGGCAGATCTGTTGGTAGCCTTGAAGATTTTTGAGAC CTTCGTCGCGTGTACTGTGGTGTTCTGAAGCCGAGTTGGATTACCTCTTT TGATGCAATCGCGGCGTGGAAAGTGATCACGCCGCCTCCCGCAGGGCCCC AGCTCCCCGCCTCTGAATTCCCTGGGCCGCGTTACCCGCCTGTCCACGTC CTTGCTTTCGTCGGGGCAGGAGCTAACCATTTCGCCGTGTTCACAAGCAC TGCTTCGACCTTTCCAAAGGGTATTCTGAAAGTAGGATAGCTACTTTTAC CTCGTTTTTCTGTTCTGAAGTGTTTTTTTGTTTTTTTTCTGTTCCTTTGG AACCTGGCCCGACCGGCGGGGAACAGGGAGGCCCGTGCGGGCGGCCGGAC TGTAACGTGTGCAGCATCTGCACCCACGGCTTCAGGCTCAGGGGTTCCGT GGGGCGCACGGCGCAGCGGACGAACATGAACCTGCGGTACGGCGAGGGTC TCTACTTCAGCAGCGTCTCCGGGAAGGCGAACGACTACGCCGTCCAATCC GAAAAGGTACATGCCCTTGCACGTAACGTGGCGTGGCATGGCGCCCGTTG CCGGAGGTCTGGCTACCAGGGTTATTTGTCGAGGTTGCTACTGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8504:127..5322-

>mRNA_E_fasciculatus_S2_contig8504.16638.1 ID=mRNA_E_fasciculatus_S2_contig8504.16638.1|Name=mRNA_E_fasciculatus_S2_contig8504.16638.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1233bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8504:127..5322- (Ectocarpus fasciculatus EfasUO2)
ATGGCGATGATGGTGTGCAGCCTGCCGGAGTGCTACCGGCCTCGCCACCA
GCGGCGGGGTGTTGTCCACGACTTCTGTAGCAGGACCCACGCTCAAGAGG
CCGCCGACATGGGGTTGATCCCTCCGCTCCATCGTCCTCACGGCAGGTGT
CATGTCTGTCAACTCCACGGCTGCAACGCGGAGGTGTTTTTCGACGAGGA
CACCAACAGGGTGCACGATTTCTGCTGTCGCAGGCACGCCAACATGGCGA
GGGCTCGCGGGCAGTGGCCCCGCCCCGGGATGCAAGGCTCCTCTGTCTGC
CAGTATCCCGGCTGCAACGAGTGGGTCTACCGCAACCCGGAAACGGGAGA
GGAGTCTGCGTTCTGCAGCCGCTCCCACTTCGAGGCCGCGCAGGACCAGG
GCGCGCAGCCTGCAGCGGAGGAGGAGCCCTTGACCGTCTGCCATAACGCT
CGCTGCCAAAGGCCGGCATGGATGGATCATCGGTCGGGCGATCAGCTCGC
CTTCTGCGGCAGCCGCTGCGCGTACACCTGTGGCGCGCAGCACCTAGTCG
GGCAGCTGAAGTGCAGCTTGCCGGGTTGCAACGACTTCACCATGCTCCAC
GATCGCACGATGGACGATATGGGGTACTGCTGCGACTACCACCGTATCAA
GGCTGAGGAGCGGAGCCTGACTCAAAACCCCGAAGCTCACGTGGATAGGA
CGTTCAGGGGTGGGCCCTCGGATGACTTCAAGCTCAGCGTCTTGACGAAA
TCGCACCAGGCGTACTCGTCGCTCAAGGAACAGTTCCTTGTGAAGTTTCA
GAAGCCTATCGACGGGCTCAGCGTGGAGAGGATTTTCAAGGTCCAGGTTC
CGGGGGACGTACGCCAAAAGCACAAGGTCTACGAGCAGGCGACCAACAAC
AACCGTCGCCGCTTCCACGGCACCTCTTGCTCCGACGCTTGCCAGTTCTT
CGTGGACCTCAAGGGAGGCCCGTGCGGGCGGCCGGACTGTAACGTGTGCA
GCATCTGCACCCACGGCTTCAGGCTCAGGGGTTCCGTGGGGCGCACGGCG
CAGCGGACGAACATGAACCTGCGGTACGGCGAGGGTCTCTACTTCAGCAG
CGTCTCCGGGAAGGCGAACGACTACGCCGTCCAATCCGAAAAGGTACATG
CCCTTGCACGTAACGTGGCGTGGCATGGCGCCCGTTGCCGGAGGTCTGGC
TACCAGGGTTATTTGTCGAGGTTGCTACTGTGA
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