mRNA_E_fasciculatus_S2_contig8488.16613.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8488.16613.1
Unique NamemRNA_E_fasciculatus_S2_contig8488.16613.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: ABC (transporter, ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB1_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 1.470e-202
Identity = 307/327 (93.88%), Postives = 310/327 (94.80%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKAQKALRAAADKERKRKVNAPGRIKKIEV 981
            ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKM+LPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQ               DLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKAQKALRAAA+KERK+KVNAPGRI KIE 
Sbjct:  303 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQ---------------DLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKAQKALRAAAEKERKKKVNAPGRISKIEA 614          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: ABC (transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z5_9STRA)

HSP 1 Score: 304 bits (778), Expect = 9.550e-95
Identity = 165/283 (58.30%), Postives = 201/283 (71.02%), Query Frame = 1
Query:   28 RVKMLQKMEANAT--PLPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQT---------LAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDA-------ETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWE 822
            R K L KM A A+  P    +   +A+M+LP PP+CH +QI LK A++GWG   PT  GV+LKL KGQ          L ILGPNGAGKST L+A+AG+LPL +G R EGEGL +GVFTQ               DLAQDLPQDA+ALE VL +VRE+DTT+SDEQAR +LG LGL GPKALR IG LSGGEKARVALAIF MIP+NLL+LDEPSNHLD        +TL SLV+A+KGW+GTVVVVSHN++FV  +  THT++V+GG +++ +R P   DWE
Sbjct:  377 RQKKLDKMAAAASDDPTELKRKVMKARMRLPAPPSCHKDQITLKDAAYGWGGDAPTVAGVDLKLLKGQVALALCLPGRLVILGPNGAGKSTTLRAIAGLLPLQSGSRVEGEGLNMGVFTQ---------------DLAQDLPQDAVALEHVLHKVREYDTTISDEQARNVLGGLGLTGPKALRPIGWLSGGEKARVALAIFSMIPHNLLLLDEPSNHLDTGAWNALRKTLESLVEAVKGWEGTVVVVSHNREFVESIEATHTAVVKGGGMEYHNRAPAPQDWE 644          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8K4_9CRYP)

HSP 1 Score: 249 bits (637), Expect = 3.310e-77
Identity = 137/277 (49.46%), Postives = 187/277 (67.51%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEG-GEVKFLDRPPRASDWE 822
            A+KAS+AQSR K L+KM+    P  L  G+   R K+ LP PP C  + + +KGA  GW    P    ++L + +G  + ILGPNG GKSTLL ALAG LPLS G R   +GL +G+FTQ               DLAQ+L   + AL++V++ V+E D T++ E+AR  +G+LGL G KAL++IG LSGGEKARVAL++FV++P+NLL+LDEPSNHLD  T+++L +A++G++GTV VV+HN+ F  R S TH + V G G+V F +RP R SDWE
Sbjct:    5 ASKASSAQSRKKQLEKMDIIEAPESLQTGR---RPKLVLPEPPKCRMDMVVMKGAEVGWSTEKPLYRDLSLSITRGMRIVILGPNGCGKSTLLWALAGRLPLSKGSRTTTDGLSLGLFTQ---------------DLAQELDPSSTALDVVMESVQEVDPTINTERARAAMGALGLTGEKALQQIGTLSGGEKARVALSMFVLVPHNLLLLDEPSNHLDIPTIDALTEALRGYEGTVAVVTHNRAFCDRFSPTHVAFVRGDGQVSFEERPVRESDWE 263          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Atp-binding (cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL6_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.370e-70
Identity = 140/282 (49.65%), Postives = 181/282 (64.18%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAG---ERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEG 837
            AT ASAA SR K L+KM     PL  GK   R  ++ P PP      ++L+ ASFG+  A P    V+  L +G  + +LGPNG GKST+LKAL G LP   G   ER  GEGL++GVFTQ               DLAQDLPQ+ IAL+ VL  VR+ D +VSD+QAR  LG+LGL G KA+R I  LSGGEKARVAL++F ++P+NLL+LDEPSNHLD  T+ +L +A+  ++GT+VV+SHNK FV RL  TH  +++   +   +R  R SDW  DA+G
Sbjct:  347 ATMASAANSRKKTLEKMAIIEAPLAAGK---RPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQ---------------DLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQG 610          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JYL6_GUITH)

HSP 1 Score: 240 bits (613), Expect = 5.460e-70
Identity = 145/330 (43.94%), Postives = 204/330 (61.82%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEG-GEVKFLDRPPRASDWEHDAEGQGWKG-GDAESKKELTPAEKKAQKALRAAADKERKRKVNAPGRIKKIE 978
            A+KAS    R K L+KME    P  L  G+   R K+ LP PP C    + +K A  GW +  P    ++L + +G  + ILGPNG GKSTLL ALAG LPL  G R   +GL +G+FTQ               DLAQ+L   + AL++V++ V+E D +++ E+AR  +G+LGL G K+L++IG LSGGEKARVAL++FV++P+NLL+LDEPSNHLD  T+++L +A++ ++GTV VV+HN+ F  R + TH + V G G+V F +RP R SDWE  A  +     G A         +K+A++A   A     K++ NAP RI+KIE
Sbjct:  360 ASKASXXXXRKKQLEKMEVIDAPESLQTGR---RPKLVLPEPPKCRMEMVVMKDAEIGWSEEKPLYRDLSLSITRGMRVVILGPNGCGKSTLLWALAGRLPLIKGSRTTTDGLSLGLFTQ---------------DLAQELDPSSTALDVVMETVQEVDPSINTEKARAAMGALGLTGEKSLQQIGTLSGGEKARVALSMFVLVPHNLLLLDEPSNHLDIPTIDALTEALRDYEGTVAVVTHNRAFCDRFNPTHVAFVRGDGQVSFEERPVRESDWEEVARAESAMAEGMAAEXXXXAAVDKEAKRAAYEA----NKKRGNAPKRIEKIE 667          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZZ7_9CRYP)

HSP 1 Score: 230 bits (586), Expect = 1.390e-68
Identity = 128/277 (46.21%), Postives = 183/277 (66.06%), Query Frame = 1
Query:   10 ASAAQSRVKMLQKMEANATPLPE--GKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGE----VKFLDRPPRASDWE 822
            A++AQS+ KML+++EA    LP      + R  ++ P P  C    + L GA++GW +  P  +G ++++E+G  LAILGPNG GKSTLL AL+G LPL  G+R+  E L++GVFTQ               DLAQ+LP DA+AL++VL   +  D T++ E+ R ++G+LGL G KAL+KIG +SGGEKARVAL++FV++P+NLL+LDEPSNHLD  T+  L +A++ ++GT++VV+HN+ F   L+ TH + V G      V    RP R SDWE
Sbjct:  155 AASAQSKRKMLERIEAGRVDLPTELDTQADRPSLRFPRPQFCEQRMVALAGAAWGW-NGRPLYSGCSVEVERGMRLAILGPNGCGKSTLLAALSGRLPLLEGKRETAEHLEMGVFTQ---------------DLAQELPLDAVALDVVLKHAQAKDMTINAERCRNVMGALGLSGSKALQKIGTMSGGEKARVALSMFVLVPHNLLLLDEPSNHLDVGTVEVLTEALQEYQGTIIVVTHNRHFCELLAPTHVARVLGEPGRQTVAIEARPLRPSDWE 415          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Uncharacterized (protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WD87_9CHLO)

HSP 1 Score: 229 bits (583), Expect = 5.440e-65
Identity = 135/287 (47.04%), Postives = 181/287 (63.07%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRA------KMKLPTPPACHTNQIELKGASFGWGD-----APPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPP-RASDWEH 825
            A+KAS AQS+ KML+K++A  T +P   ++  A       +KLP  P C+T  I+LK A+ GWG      + P   GVN+ + +GQ + +LGPNGAGKSTLLKA+AG LPL AGER  G+G+++ VF+Q               DLAQDLP D  ALE V    R +D  ++ E+ R  LG+LGL G  AL+KIGVLSGGEKARVALA F ++P N+L+LDE SNHLDA+T+  L  A+K ++G ++ ++HN+ F   L+ TH   V  G  K  D     ASD+EH
Sbjct:  418 ASKASQAQSKAKMLEKLKAQQTVIPAAAAAAGAGDARKVALKLPRAPPCYTEAIKLKNAAVGWGTPGEPGSKPLINGVNVVIRRGQRVLVLGPNGAGKSTLLKAVAGNLPLWAGERVLGDGVRLAVFSQ---------------DLAQDLPLDMPALEYVEAVARANDPGITLEKCRQALGALGLTGTMALQKIGVLSGGEKARVALAAFALVPANVLLLDEASNHLDAQTIEVLTGALKDFEGVIIAITHNQAFAASLNATHILRVANGAAKLSDNLGLSASDFEH 689          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Uncharacterized (protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XCU8_9CHLO)

HSP 1 Score: 226 bits (575), Expect = 6.090e-64
Identity = 131/283 (46.29%), Postives = 171/283 (60.42%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATPLPEGKS------SFRAKMKLPTPPACHTNQIELKGASFGWGDA----PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGV----------LSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKF 789
            A+KAS AQSR K L+K+++N    P   +      + +  +KLP  P CH   + ++ AS GWG+      P  TGV LK+EKGQ + +LGPNGAGK+TLLK LAG +P+  G R  GEG KI VF+Q               DLAQDLP D  ALE VL++ R  D  ++ EQ R  LG+LGL G  AL +IG+          LSGGEKARVALA F ++P NLL+LDE SNHLDA T+N+L  A++ + G +V ++HNK F   L  TH   V+GG+ K 
Sbjct:  384 ASKASQAQSRAKQLEKIKSNMVAAPAASAGDGPGDARKVALKLPKAPPCHQEVLIMEDASIGWGEPNGLKDPLLTGVKLKVEKGQRVLVLGPNGAGKTTLLKVLAGAVPIWGGMRHLGEGAKISVFSQ---------------DLAQDLPMDRKALEYVLEKARVDDVNITQEQGRRSLGALGLSGEMALARIGMSLHYAAVVCDLSGGEKARVALAAFALVPCNLLLLDEASNHLDAATINALTTALQAFDGAIVAITHNKAFADSLHATHVLRVQGGKAKL 651          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RWN8_9CHLO)

HSP 1 Score: 224 bits (570), Expect = 8.460e-64
Identity = 128/270 (47.41%), Postives = 170/270 (62.96%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATPLPEGKSSF------RAKMKLPTPPACHTNQIELKGASFGWGDA---PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEV 783
            A+KAS AQS+ K+ +K+      +P   S+       +  +KLP  P C T+ + LKGAS GWG     PP  T V+L ++KGQ + +LGPNGAGKSTLLKAL G L L +G RKEGEG+K+ VF+Q               DLAQDLP    AL+ V D  R +D  ++ E+ R  LG+LGL G  AL++IGVLSGGEKARVALA F ++P N+L+LDE SNHLDA T+N L  A++ ++G +V ++HN  F   L+ TH   V GG+ 
Sbjct:  386 ASKASQAQSKAKLAEKLRDEMVEVPTAASALGGGDLIKVALKLPRAPPCFTDVLMLKGASVGWGTPGVLPPLLTNVDLTIKKGQRVLVLGPNGAGKSTLLKALGGQLALWSGSRKEGEGVKMAVFSQ---------------DLAQDLPLHKTALQYVEDTARAYDPNITLEKCRAALGALGLVGSMALQEIGVLSGGEKARVALAAFALVPSNVLLLDEASNHLDAATINVLTGALQEFEGAIVAITHNPAFAASLNATHVLRVAGGKA 640          
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Uncharacterized (protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YFM3_9CHLO)

HSP 1 Score: 225 bits (574), Expect = 1.230e-63
Identity = 134/296 (45.27%), Postives = 184/296 (62.16%), Query Frame = 1
Query:    1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRA------KMKLPTPPACHTNQIELKGASFGWG---------DAP-PTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPP-RASDWEHDAEG 837
            A+KAS AQS+ KML+K++A  T +P   ++  A       ++LP  P C T  I+L GAS GWG         DAP P  +G+NL + +GQ + +LGPNGAGKSTLLKA+ G +PL  G R+ GEG+++ VF+Q               DLAQDLP +  AL+ V    R +D  ++ E+ R  LG+LGL G  AL+KIGVLSGGEKARVALA F ++P N+L+LDE SNHLDA+T++ L  A+  ++G ++ ++HN+ F T+L  TH   V  G  K  D     A+D+EH A G
Sbjct:  411 ASKASQAQSKAKMLEKLKAQQTVVPAAAAAAGAGDARKVALRLPRAPPCFTEAIKLTGASVGWGQPPADPAAPDAPQPLISGINLVIRRGQRVLVLGPNGAGKSTLLKAIGGSIPLWGGARQLGEGVRLAVFSQ---------------DLAQDLPLEMPALDYVQAVARANDPGITLEKCRQALGALGLTGTMALQKIGVLSGGEKARVALAAFALVPANVLLLDEASNHLDAQTIDVLTGALNDFEGVIIAITHNQAFATQLKATHILRVNNGTAKLGDNMGLSAADFEHGAPG 691          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ABC1.470e-20293.88transporter, ATP-binding protein n=1 Tax=Ectocarpu... [more]
ABC9.550e-9558.30transporter n=1 Tax=Tribonema minus TaxID=303371 R... [more]
Hypothetical3.310e-7749.46protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S... [more]
Atp-binding1.370e-7049.65cassette superfamily n=2 Tax=Monodopsidaceae TaxID... [more]
Hypothetical5.460e-7043.94protein n=1 Tax=Guillardia theta TaxID=55529 RepID... [more]
Hypothetical1.390e-6846.21protein (Fragment) n=1 Tax=Cryptomonas curvata Tax... [more]
Uncharacterized5.440e-6547.04protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A... [more]
Uncharacterized6.090e-6446.29protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 R... [more]
Hypothetical8.460e-6447.41protein (Fragment) n=1 Tax=Chlamydomonas leiostrac... [more]
Uncharacterized1.230e-6345.27protein n=1 Tax=Edaphochlamys debaryana TaxID=4728... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8488contigE_fasciculatus_S2_contig8488:313..5731 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score582.4
Seed ortholog evalue1.3e-163
Seed eggNOG ortholog2880.D7FVB1
Model size993
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.ATPase activity
EggNOG OGsCOG0488@1,KOG0062@2759
Cds size993
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8488.16613.1prot_E_fasciculatus_S2_contig8488.16613.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8488 313..5731 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842507.2819085-CDS-E_fasciculatus_S2_contig8488:312..4571696842507.2819085-CDS-E_fasciculatus_S2_contig8488:312..457Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 313..457 -
1696842507.2939909-CDS-E_fasciculatus_S2_contig8488:786..9471696842507.2939909-CDS-E_fasciculatus_S2_contig8488:786..947Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 787..947 -
1696842507.305438-CDS-E_fasciculatus_S2_contig8488:1467..15051696842507.305438-CDS-E_fasciculatus_S2_contig8488:1467..1505Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 1468..1505 -
1696842507.319175-CDS-E_fasciculatus_S2_contig8488:1750..18921696842507.319175-CDS-E_fasciculatus_S2_contig8488:1750..1892Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 1751..1892 -
1696842507.3285153-CDS-E_fasciculatus_S2_contig8488:3916..40241696842507.3285153-CDS-E_fasciculatus_S2_contig8488:3916..4024Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 3917..4024 -
1696842507.3379958-CDS-E_fasciculatus_S2_contig8488:4623..48031696842507.3379958-CDS-E_fasciculatus_S2_contig8488:4623..4803Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 4624..4803 -
1696842507.3505898-CDS-E_fasciculatus_S2_contig8488:5081..51591696842507.3505898-CDS-E_fasciculatus_S2_contig8488:5081..5159Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 5082..5159 -
1696842507.3613048-CDS-E_fasciculatus_S2_contig8488:5590..57311696842507.3613048-CDS-E_fasciculatus_S2_contig8488:5590..5731Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8488 5591..5731 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8488.16613.1

>prot_E_fasciculatus_S2_contig8488.16613.1 ID=prot_E_fasciculatus_S2_contig8488.16613.1|Name=mRNA_E_fasciculatus_S2_contig8488.16613.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=331bp
ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPTPPACHTNQIEL
KGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPL
SAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVL
DRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFV
MIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLST
THTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKA
QKALRAAADKERKRKVNAPGRIKKIEVRTR*
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mRNA from alignment at E_fasciculatus_S2_contig8488:313..5731-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8488.16613.1 ID=mRNA_E_fasciculatus_S2_contig8488.16613.1|Name=mRNA_E_fasciculatus_S2_contig8488.16613.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5419bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8488:313..5731- (Ectocarpus fasciculatus EfasUO2)
GCTACGAAGGCATCTGCTGCACAATCGAGGGTGAAGATGTTGCAGAAGAT GGAGGCCAACGCCACGCCTTTGCCCGAGGGAAAATCGTCCTTCAGGGCCA AGATGAAACTGCCGACGCCGCCAGCTTGCCACACCAATCAGGTTATCCTA GTTTACATCACACGATGCAGATATCCACACCAAACAGGTGTTTACAGCGT TCAGAACGATACTGCCTCCTGCTCTGCACTTCTAATTTCAACACACGAAC CAGGCAATCTACAATTGTACAGTAGTTTGCAACACACCGAACAGGTTTTT GCAGCATTCAAAGTGAGTGAGTGCATGTTACACCCGTTGGCAGCACTCTC ATCGCCAAGACTTCTTTGCTGCTATTTTGGTGGTTCCACATCCTCTTGTG TTGGCCGTGCTGTGTAGTCAATGGTTTGCTGGGCTGCTGCAGCGCTCCTG CGCCGTGTTGCTGTCTATTGGTGATATGGTACACTATCTGCTGTGACTAC TATACTACTACAGTAATACTGCTGTGTTGCGGCCGCCTGTCGTTTAAACA ACTGCTCGATGCCTGGGTGTAGATCGAGTTGAAGGGTGCGAGCTTCGGGT GGGGAGATGCGCCGCCGACAGCTACAGGCGTCAACCTCAAGCTGGAAAAG GTGAGACTGAGACTTCGAAGACAGAGGTAAACATGGAGGTACGTGAGGGA TGGTTGTGCAAACACGCGCCCTTTCGTCGCCTTGCTGTGCTGGGGCTCTG CTGCTGTGTCTGCTGTTACAGTATGTCTTGAATTTGACTTGTTGAAACAA TTGTCTTGGTTCAAGAGAAGAGAAGGTGTGTGGAGGAAGTGGACGGCACG ATACATCTGCTGGTGTGAATACAAGCTCAAACTCTTCCCACTGCTCTCTT TTCCTCACGGTATCACTCAACGCAACAGGGACAAACACTGGCAATTCTGG GTCCAAACGGTGCGGGTAAATCTACCCTTCTGAAAGCGCTGGCGGGAATT CTTCCTCTTTCTGCGGGAGAACGAAAGGAAGGGGAAGGGCTCAAGATAGG CGTGTTCACACAGGCAAGCAAGCTAACGATAACGAATTGCAAACAACACG AGACACGAGTGAACGAAATGGAAACACGACGGTCTTGTCTTGTAGTTGTA GTACAATAGAAGCGGAACCACTTGACCCTAGAAGGAGAGGAACAATAACG AAGGTTGGTAAGATAAGCATCACGTGATAGTTTCCTTTAAATCGTGCCGA CATCACACAGTCCGTGATTGCGGCCTATTCCCGACAAAGGCGCCCTACGA CAAGGCAAGACAACTCTATAGTAGAGCAGTGCACGATCGATGATTCGGCT TGGTACTGGAAGCAATGTTCAGGCATTTTGACAAGGCATGAGAGTTTCTC TGTCTGAACCTTGGTCTTGCCATAGTGTCTCCCAAGTGGCACACAACCAC CTTTTCAACCCTCTTCCGTCTTGTCTGTGTCTCTGTATTTTGTTTACAGT GTCCCTTGTTTTGTTTGCGCAAACGCGTGGTGCCGTCGTTTTTTTTCTGC ACACGTGCGGCATGTCGGTAACATCACTTACAACGCCGACGCTGGCGTTT CGCCCTGTGCTGCACCTGCACCTTTTCTTGCGTGTTTTCTTCTCCTCTTT GTCCGTCGTGCTGCTGCTCATCCATCCTTGGGGATCGATGTCTCGCGTCT CGATCAGGATCTGGCCCAAGATCTACCGCAGGATGCCATCGCCCTGGAGT TGGTTTTGGACAGAGTCAGGGAGCACGACACAACGGTCTCCGACGAACAA GCACGAACTATCCTGGTGAGCTGTTGAAAGTGAGAGATTGAGGATAAGAG TTGCCTGGAATATATAGAGTGGTTGCTCGAACCTCAGTTATGAATTGGCT TGACATCGGACAACCGGCAACCTCTTTGTTGCGTAATTGAGATCGTTGAG CATCGTTGACGTCGAGCATAGTTGGCATCGAGGATCATGAAGGCCGGAGA TCGTTGAGTATCGTTGAGGATCGAGAATCGTTGAGGTCGAGCGGCGTTGA GCATAGACGAGCATCGTTGAGCATCGTTGGCTGATCGAGGATCGTTGAGG CCGGGCACTGTTGATTAGCGTTGAGTATCGTTGAATATCGTTTACACCGA CTATCTTTGATATCGAGGATCGTTAGGGTCGAGGTCGAGCATCTTTGGTG TCGAGGATCGTTGAGGTTGAGGATCAGTGAGCATCGTTGAGGTTAGTTGG CATCGAGCATCGTTGGCGTCGAGGATGGGTGAGGTCGACCATCGTTGAGC ATCGTTGAGGATTGAAGATCGTTGCGGTCGAGGATCGTTAGTCATCGTTG AGCATCGTTAACGTCGAGGGTCGTTGGCCTGGAGCATCGTTGCGGCCGAG TGTCGTTGAAAATCGTTGAGCATCGTTCACGTCGAGAATCGTTGATGTCG ACGAGCATCGTTAAGCATCGTTGAGCATTGTGGAGCATCGTTGAGGTCGA AGATTGTTGAGCACCGTTGGCGTCAAGGGTGGTTAAGGACCGTTGACGTT AAGGATCGTTGAGGTCGAGGGTCGTTGAGGACCGATGGCGTCGAGCATCA CTGGTGTTGAGGATTGTTGAGAATTGTTGAGGTCGAGGGTTGTTGGCATC GAGGATTGTTGGCCTTGAGGATCGTTGAGGATCGTTGAGGTCGAGGTTCG TTGAGGACCGTTTAGGTCGAGGTTCGTTGAGGATCGTTAGCGTCGAGCAT CATTGGCATGGAGGATCGTTGAGAATCGTTGAGGTCGAGGATTGTTGGCA TCAAGGATCATGGAGGATCGTTGCCGTCGAGCATCGTTGGTTTCGAGGAT CGTTGAGGTCGAGCATTGTTGAGCATCGTTGAGGTCGAGGATCGTTGGCC TCGCGGATCGTTCGTTGGCTTCGAGCATCGTTGATCACCGTTGACGTGTA GGGTCGTTCGGATCGTTGTCGTTGAGGATCGTTGCCGTCGAGGATCGTTG AGCATCGTTAAGGATCGTTGAAGATCGTTGACGTCGAGGATCGTTGAGCA TCGTTAAGGATCGTTGAAGATCGTTGACGTCGAGGATCGTTTAGGATCAT TGGCCTCGAGGATCGTTGAGCATCGTTGAGGTCGAGGATCGTTGGCGTTA AGCATCGCCGAGGATGGTTGGCGTCGGGGATCGTTGGTGTGGAGGATCGT TGAGGATCGTTGGCTTCGAGCATCGTTGATCACCACGGTCCGTTATGTAT AGCATCGTTAGGATCGTTGGCGTCGAGGATCGTTGAGGTCGAGGGTCGTT GAAGATCGCTGAGGTCGAGGATCGTTGGCCTCGAGGATCGTTGAGGTCTA GGATCGTTGGCGTGGAGGATCGTTGAGGATCGTCGGCCTCGAGGATCGTT CGTCTCTAGGATCATTGGGGATCGTTGGCGTCGAGAATCGTTGAGGATCG TTGAGGATCGTTGACGTCGAGGAAGCCTCTCAAAAATGCGGCAAGGTTCA CGTGCCTCTAGGCAGGAGGCGTCATCCAATCTCATAGTTGCATCAAAGTG GCCGACAACGGTGTCAAGACAAGGATGCCAACAACAATGTTGTTACGACT GTTTTCGTCTCGCATATGGTACTTTTAATATATGTAGTCAACAACGCAGA CGTTATTCGACTCGACACTCGATAAGTGACTCAAACCCAAGTCGAGCACA ACGTTGGCATCGCCTGACAATTTTCCTTCGAAGCCTTAGGTGGCGCACCC ACATGTCGAGCACCGTCGTTGCAATGATTGTCGGGTGGTTGGTGCCTGAC AGTAAGATTTCGCAATTCCGCCGTCCGCATGTGGTGCAGGGGTCGCTGGG GCTGCAAGGACCCAAGGCTTTGAGAAAGATCGGCGTTCTCTCCGGAGGGG AGAAAGCGAGAGTGGCCCTGGCGATCTTCGTCATGATCCCATACAACCTG CTCATGCTCGATGAGCCCAGCAACCATCTCGGTGAGTCGACACATCTATC TCCAGCCCACTGCCGCTCTTGTGATTGGCTGCGATCGAGCGGAATTAATA TCGCGGGGCTCTCTTCTTGTAACATGTTAAGGTGTAGTTGCATCACAATA CTCATCACGATCGGCCGAATGTGTGTTTAACAACTGGACGGTTTGTGCCT CCTTTGGTTGTGCTTGTGGTTCACGTACGTTGTCATGGCATGTGATGGCG CGGCTTGCTTGGATTGGATGACGAAGATGCTGAAACCCTCAACTCGTTGG TCGACGCGATCAAGGTGAGCTGCGCAGAATGAAGCTGCGGTGCGACGAAA AATGACAAATGATCCACCCACATTACATGGAGTACATGTAACGTTGACAA ATGGAAGTAAAGAAAGGTGTGTATTCAAGTTGTAAGTTGGCCGTTGCTGT TGCTATTTTCTTGTCATACTCTGTGCCGACGTTGCCTGGTTCTGATTGTG CTAAGCTACGACTTGCGCCATGGAGTACCGTGTGGGCCTTGCGCCTTTGT GCACTGCAGCATGGTTTGGTGCGGAATGATGTGGGTGGTGTGGTGTGACA TATTGTTATTCGTTATCGGGTACACCATGTTCGCGCACCGCTTGTGGGTG ACAGCACGACCTAGAGTCTTGAACAGCATTCCCCGCCAGCTATTTGTTCT TACCCCTAACGCGTGTCTGTCGATACGACTAAACGTCTATCGGTTTCTCC CTTCTTAATACGTCACGCCGTTCTACGTAACGTTCTTTGGATCGTTCTTG GTAACGAACGTCCTGCAATCGATCGATCGATCAGGGGTGGAAGGGCACGG TGGTGGTGGTATCCCACAATAAGGACTTCGTGACCCGGCTGTCGACGACA CACACGTCGATCGTTGAGGGAGGGGAGGTGAAGTTCCTCGACAGGCCGCC GAGGGCATCGGACTGGGAGCACGATGCGGAGGGGCAAGGTTGGAAGTGAG TGTGACCGACCCGTCGGAAAGGAAAGCGAGAGAGAGAAGTGAGAGAAGCA GGGAGGGGTGGAGGTTCACTTCATGTAGCGTCTCAAAATGGACATGTCGT AGTGGTTCGCAACCCGTCATAGAATAAGTGGTAGCCAGGGCTTCGAAGTA TATTGTCCCTGTTTTTGTTCGAGGAGGGCCGGCGTTTTGCCGGGTCTGGC GTCACTGATCTGTTGTAGGTGTGACGGTGTGCCTAGAAACGGAATAGAAG ATGCGATATCATCCGGCTGAGGGTTGTTTGTTGCTAATTCCCTCCCTTCT CCTTCTTTTTCTCTTGCTTGCCAGGGGAGGCGACGCAGAATCGAAGAAGG AGTTGACCCCTGCCGAAAAGAAGGCGCAGAAGGCGTTGAGAGCGGCCGCA GACAAAGAGCGAAAACGAAAAGTCAACGCCCCGGGAAGAATAAAGAAAAT CGAGGTGAGGACAAGGTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8488:313..5731-

>mRNA_E_fasciculatus_S2_contig8488.16613.1 ID=mRNA_E_fasciculatus_S2_contig8488.16613.1|Name=mRNA_E_fasciculatus_S2_contig8488.16613.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=993bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8488:313..5731- (Ectocarpus fasciculatus EfasUO2)
GCTACGAAGGCATCTGCTGCACAATCGAGGGTGAAGATGTTGCAGAAGAT
GGAGGCCAACGCCACGCCTTTGCCCGAGGGAAAATCGTCCTTCAGGGCCA
AGATGAAACTGCCGACGCCGCCAGCTTGCCACACCAATCAGATCGAGTTG
AAGGGTGCGAGCTTCGGGTGGGGAGATGCGCCGCCGACAGCTACAGGCGT
CAACCTCAAGCTGGAAAAGGGACAAACACTGGCAATTCTGGGTCCAAACG
GTGCGGGTAAATCTACCCTTCTGAAAGCGCTGGCGGGAATTCTTCCTCTT
TCTGCGGGAGAACGAAAGGAAGGGGAAGGGCTCAAGATAGGCGTGTTCAC
ACAGGCAAGCAAGCTAACGATAACGAATTGCAAACAACACGAGACACGAG
ATCTGGCCCAAGATCTACCGCAGGATGCCATCGCCCTGGAGTTGGTTTTG
GACAGAGTCAGGGAGCACGACACAACGGTCTCCGACGAACAAGCACGAAC
TATCCTGGGGTCGCTGGGGCTGCAAGGACCCAAGGCTTTGAGAAAGATCG
GCGTTCTCTCCGGAGGGGAGAAAGCGAGAGTGGCCCTGGCGATCTTCGTC
ATGATCCCATACAACCTGCTCATGCTCGATGAGCCCAGCAACCATCTCGA
TGCTGAAACCCTCAACTCGTTGGTCGACGCGATCAAGGGGTGGAAGGGCA
CGGTGGTGGTGGTATCCCACAATAAGGACTTCGTGACCCGGCTGTCGACG
ACACACACGTCGATCGTTGAGGGAGGGGAGGTGAAGTTCCTCGACAGGCC
GCCGAGGGCATCGGACTGGGAGCACGATGCGGAGGGGCAAGGTTGGAAGG
GAGGCGACGCAGAATCGAAGAAGGAGTTGACCCCTGCCGAAAAGAAGGCG
CAGAAGGCGTTGAGAGCGGCCGCAGACAAAGAGCGAAAACGAAAAGTCAA
CGCCCCGGGAAGAATAAAGAAAATCGAGGTGAGGACAAGGTAG
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