mRNA_E_fasciculatus_S2_contig8479.16605.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8479.16605.1
Unique NamemRNA_E_fasciculatus_S2_contig8479.16605.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI39_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 5.420e-150
Identity = 346/409 (84.60%), Postives = 359/409 (87.78%), Query Frame = 1 
Query:    1 GAKGTAKA-GNNDTTGSQVVVDDGNLGTSSDVGNTNTLWEQMTAREGKDAAHRAGMRAGDWQAERQLQEALRESRQEGGPDGVASTPESGGREEEEEAGFVDTGFHALATNAVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EDYGDVELVVTQDGGIIPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD--HVRKNATAMEEEPGEEEEETPLPPDIVLTLPDDVLHRTMLFLNPEDIFECRAVSSRWRFPGDESVYEGLCRRTYLAQSAKKMLNVKRWRSWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQ 1215
            GA+GTAKA GN+DT  S  V DDGNLG  S VGNT  LWEQMTAREGKDAA  AGMRAGDWQAERQLQEALRESRQ+GGP GVAS+ E  GRE++E A FVDTGFHALATNAVEGEE      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EDYGDVELVVTQDGGIIPV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         AD  H+ K ATAM+EE GEE   TPLPPDIVLT+PDD+LHRTMLFLNPEDIFECRAVSSRW FPG E+VYEGLCRRTYLAQSAKKMLNVKRWRSWQRMFKFRPRLRDTG+YSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYF+FFGDGRVAYALTHE PKDFVRMLQ
Sbjct:   30 GAEGTAKAAGNDDTATSSQVADDGNLGDGSGVGNT--LWEQMTAREGKDAARLAGMRAGDWQAERQLQEALRESRQDGGPVGVASSLEGSGREDDE-ASFVDTGFHALATNAVEGEEGEGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDYGDVELVVTQDGGIIPVATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEDVGAAAADNEHLPKIATAMDEEQGEEV--TPLPPDIVLTMPDDILHRTMLFLNPEDIFECRAVSSRWSFPGHENVYEGLCRRTYLAQSAKKMLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFKFFGDGRVAYALTHEPPKDFVRMLQ 433
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 3.320e-76
Identity = 227/334 (67.96%), Postives = 238/334 (71.26%), Query Frame = 1 
Query:    1 GAKGTAK-AGNNDTTGSQVVVDDGNLGTSSDVGNTNTLWEQMTAREGKDAAHRAGMRAGDWQAERQLQEALRESRQEGGPDGVASTPESGGREEEEEAGFVDTGFHALATNAVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDYGDVELVVTQDGGIIPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------ADHVRKNATAMEEEPGEEEEETPLPPDIVLTLPDDVLHRTMLFLNPEDIFECRAVSSRWRFPGDESVYEGLCRRTYLAQ 954
            GA+GTAK AG + TT S  V DDGNLG SSDV   NTLW+QMTAREGKDAA RAGMRAGDWQAERQLQEALRESRQ+ GP GV S  E  GRE +E A FVD GFHALATNA+EGEE                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  YGDVELVVTQDGGIIPV         XXXXXXXXXXXXXXXXXXXXXXXXXXX                                ADH+ KNATA++EE GEE   TPLPPDIVLTLPDD+LHRTMLFLNPEDIFECRAVS+RW FP  E VYEGLCRRTYLAQ
Sbjct:   27 GAEGTAKPAGTHGTTTSSQVADDGNLGDSSDV--CNTLWDQMTAREGKDAARRAGMRAGDWQAERQLQEALRESRQDDGPVGVTSILEGSGREGDE-ASFVDMGFHALATNALEGEEGEGEAATAADTEVASSRGQPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDVELVVTQDGGIIPVAAGSVGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXHDHKLAKKAFEGGVRVGVAAEDVGAAXXXXXXADHLPKNATAIDEEQGEEV--TPLPPDIVLTLPDDILHRTMLFLNPEDIFECRAVSTRWSFPEHEKVYEGLCRRTYLAQ 355
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: F-box (domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5V6_SELML)

HSP 1 Score: 71.6 bits (174), Expect = 5.320e-10
Identity = 48/167 (28.74%), Postives = 84/167 (50.30%), Query Frame = 1 
Query:  811 LPDDVLHRTMLFLNPEDIFECRAVSSRWRFPGDESVYEGL-CRRTYL---AQSAKKMLNVKRWRSWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEW-TPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQQEGSPKVVFG-TYTISKWEVNVEIPNP 1293
            L +D+LH   + L+P  + +   V  +WR+     V+  L C +T+     +  +K+L+     SW++M+  RPRLR  G+Y  + TY +  V     EW     +  V YYRY RFF +GR  Y  T    K+  + + +  + +  +G  YT+++ +V+  +  P
Sbjct:   55 LSEDILHEIFMRLSPYTLGKASCVCRKWRYAIRNPVFWRLACLKTWQLHGVEGNRKILSQNYDGSWRKMWHHRPRLRFDGIYVSRNTYIRAGV----AEWKVTNPVHLVCYYRYIRFFPNGRFLYKNTALRLKEIAKTMNRRATKENTYGGRYTLAQSQVDAAVVYP 217
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VMP6_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 1.520e-8
Identity = 51/138 (36.96%), Postives = 71/138 (51.45%), Query Frame = 1 
Query:  994 WQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQQEGSPKVVF-GTYTIS--KWEVNVEIPN---PWSWVSFTLQLANGERGRFTHLVMLRHSSVSRN 1389
            W  MF  RPRLR  GVY +    + +P R  +  WT    L VTYYRY RFF DGR+   L+ E PKD +R+L  + S + VF G + +     +V VE+ +   P    +  L + +  RGR   L  L ++S   N
Sbjct:  289 WLGMFIERPRLRYDGVY-ISVCQYIRPGRSDTNAWTQPVHL-VTYYRYLRFFPDGRIVKYLSTEEPKDVIRLLTPDFSRRQVFHGKFCLDDDNGQVAVEMRDKTRPRDRFNMLLYIKSTSRGRHNKLGWLSYTSKKDN 424
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: F-box (domain-containing protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A7J7MD57_9MAGN)

HSP 1 Score: 64.7 bits (156), Expect = 1.300e-7
Identity = 47/168 (27.98%), Postives = 78/168 (46.43%), Query Frame = 1 
Query:  811 LPDDVLHRTMLFLNPEDIFECRAVSSRWRFPGDESVY-EGLCRRTYLAQSAK---KMLNVKRWRSWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEWTP-GKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQQEGSP--KVVFGTYTISKWEVNVEIPNP 1293
            LPD++L+     +NP  + +   V  +WR+     ++    C RT+         ++L  K   SW++M+  RPR+R  G+Y  + TY +  +     EW     +  V YYRY RFF +G+  Y  + +  KD  + +    S    V  G YT++  +V   I  P
Sbjct:   88 LPDELLYEVFARMNPYSLGKAACVCRKWRYTIRIPLHWRNACLRTWQISGPVENYRILQSKYDGSWRKMWLLRPRIRTDGLYVSRNTYIRVGI----AEWRVYNPVHLVCYYRYMRFFPNGKFLYMNSSQKLKDVAKYMNFRASKTESVFSGKYTLTDDKVEAAILYP 251
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: F-box (protein pof7 n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175W378_9PEZI)

HSP 1 Score: 65.5 bits (158), Expect = 1.300e-7
Identity = 42/106 (39.62%), Postives = 53/106 (50.00%), Query Frame = 1 
Query:  991 SWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMST-EW-TPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQQE---GSPKVVFGTYTISKWEVNVEIPNP 1293
            SWQRMF+FRPR+R  G Y     Y +  + +++T  W TP  I  VTYYRY RFF DG      T   P D V  L +E      KV   +    +W +  E  NP
Sbjct:  351 SWQRMFRFRPRIRFNGCYICTVNYIRSGLANVNTITWNTPVHI--VTYYRYLRFFRDGTAISLQTTAEPADVVHHLTREFVASGSKVAEHSILKGRWRLAREADNP 454
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: F-box (domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EBA5_ASPOF)

HSP 1 Score: 64.3 bits (155), Expect = 1.470e-7
Identity = 45/169 (26.63%), Postives = 83/169 (49.11%), Query Frame = 1 
Query:  808 TLPDDVLHRTMLFLNPEDIFECRAVSSRWRFP-GDESVYEGLCRRTYLAQSAK---KMLNVKRWRSWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEW-TPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQQEGS-PKVVF-GTYTISKWEVNVEIPNP 1293
            +LPD++++      +P  +     V  +WR+   + S+++  C R +    A    K++      SW++M+  RPR+R  G+Y  + TY +  V     EW     +  V YYRY RF+ +GR+ Y ++ +  K+  + +    S P  V+ G Y +++ +V   I  P
Sbjct:   62 SLPDELIYEVFARADPYSLGRAACVCRKWRYTIRNPSLWQNACLRAWQLSGASENYKIVTSMYDCSWRKMWTHRPRVRFDGLYVSRNTYVRVGV----AEWKVTNPVHLVCYYRYIRFYPNGRLLYKVSSQRVKEAAKCMHLRASKPDCVYKGEYRLAEDQVEAAILYP 226
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: DgyrCDS4115 (n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VFN7_9ANNE)

HSP 1 Score: 63.5 bits (153), Expect = 4.030e-7
Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 1 
Query:  787 LPPDIVLTLPDDVLHRTMLFLNPEDI-FECRA--VSSRWRFPGDESVYEGLCRRTYLAQSAKKMLNVKRWRSWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQ 1215
            LPP+I+  +   V+ + +   + E++   CR   VSSR     DE ++ G+C++ +    +    +VK++  W+ M+  RP LR  GVY  K +Y ++    +   + P  I  V YYRY RF+ DGRV +  + E P+  V +L+
Sbjct:  161 LPPEIIAHIIKWVVGKHLDVESLENLGMVCRGLFVSSR-----DEKIWRGICQQIWGINCS----SVKKYGCWRNMYIHRPHLRYNGVYISKMSYLRQGEVSLDGLYNPFHI--VEYYRYVRFYSDGRVVHLTSPEHPRSVVGVLK 295
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BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: Ubiquitin-fold (modifier 1 n=3 Tax=Musa TaxID=4640 RepID=A0A4V4H3R7_MUSBA)

HSP 1 Score: 62.8 bits (151), Expect = 6.650e-7
Identity = 40/167 (23.95%), Postives = 80/167 (47.90%), Query Frame = 1 
Query:  811 LPDDVLHRTMLFLNPEDIFECRAVSSRWRFP-GDESVYEGLCRRTYLAQSAKKMLNVKRWR---SWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEW-TPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQQEGSPKVVF-GTYTISKWEVNVEIPNP 1293
            LPD++L      ++P  +     V  +WR+   + +++   C + +     +    + +     SW++M+ +RPR+R+ G+Y  + TY +  V     EW     +  V YYRY RF+  G+  Y ++ +  K+ V+ + +      VF G Y +++ +V   +  P
Sbjct:  133 LPDELLFEVFSRMSPYTLGRAACVCRKWRYTIRNPNLWRNACLKIWQVSGVETNYRIVQSLYDGSWRKMWVWRPRIRNDGLYVSRNTYIRTGV----AEWKVTNPVHVVCYYRYLRFYPSGKFLYKISSQKVKEVVKCMNRASKADCVFKGDYILTEDQVETALLYP 295
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Match: uncharacterized (protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867225A)

HSP 1 Score: 62.4 bits (150), Expect = 9.570e-7
Identity = 60/217 (27.65%), Postives = 97/217 (44.70%), Query Frame = 1 
Query:  904 GDESVYEGLCRRTYL--------AQSAKKMLN-----VKRWRSWQRMFKFRPRLRDTGVYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFRFFGDGRVAYALTHETPKDFVRMLQQEGSP----------KVVFGTYTI---SKWEVNVEIPNPWSWV-SFTLQLANGERGRFTHLVMLRHSSVSRNDARAGRCHHSVKSTDFFTFQRVWQF*TG 1473
            G+E V+ G+CR  Y          +S+    +      K   S+ +MF  RPR+R  GVY     Y +  V D +   TP  I  VTY+R+ RFFG+G+V   LT + P++ V  L  E             +V +GT+ +   S   +++ +     +     LQ+ +  RGR   L  +R  SVS+      R    +++   + F RV ++  G
Sbjct:  208 GEEGVWRGVCREYYRHMTYAEPEPESSTPPFDEDGDLAKYGGSYLQMFTLRPRIRLDGVYISTCNYTRPGVNDGAWN-TPIHI--VTYFRFLRFFGEGKVVSVLTTDEPREVVADLGVEKDDSEEVAEGRGKRVPWGTWALDPTSSGRLHIHLSGHGKYFFEMELQIKSTSRGRHNKLAWVRFESVSKETGE--RMEFGLRNDKPYFFSRVRRYGRG 419
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8479.16605.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F-box5.420e-15084.60domain-containing protein n=1 Tax=Ectocarpus silic... [more]
F-box3.320e-7667.96domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
F-box5.320e-1028.74domain-containing protein n=2 Tax=Selaginella moel... [more]
F-box1.520e-836.96domain-containing protein n=1 Tax=Mucor circinatus... [more]
F-box1.300e-727.98domain-containing protein n=2 Tax=Magnoliopsida Ta... [more]
F-box1.300e-739.62protein pof7 n=1 Tax=Madurella mycetomatis TaxID=1... [more]
F-box1.470e-726.63domain-containing protein n=2 Tax=Asparagus offici... [more]
DgyrCDS41154.030e-731.51n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 Rep... [more]
Ubiquitin-fold6.650e-723.95modifier 1 n=3 Tax=Musa TaxID=4640 RepID=A0A4V4H3R... [more]
uncharacterized9.570e-727.65protein n=1 Tax=Saitoella complicata (strain BCRC ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8479contigE_fasciculatus_S2_contig8479:1486..6634 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score407.5
Seed ortholog evalue7.9e-111
Seed eggNOG ortholog2880.D8LI39
Model size1550
KEGG koko:K10295
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2E438@1,2SB1N@2759
Ec32 ortholog descriptionF-box domain
Ec32 orthologEc-04_003120.1
Cds size1347
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8479.16605.1prot_E_fasciculatus_S2_contig8479.16605.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8479 1606..6551 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842506.5079768-UTR-E_fasciculatus_S2_contig8479:1485..16051696842506.5079768-UTR-E_fasciculatus_S2_contig8479:1485..1605Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8479 1486..1605 +
1696842506.6170325-UTR-E_fasciculatus_S2_contig8479:6551..66341696842506.6170325-UTR-E_fasciculatus_S2_contig8479:6551..6634Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8479 6552..6634 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842506.5217152-CDS-E_fasciculatus_S2_contig8479:1605..17101696842506.5217152-CDS-E_fasciculatus_S2_contig8479:1605..1710Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8479 1606..1710 +
1696842506.5371277-CDS-E_fasciculatus_S2_contig8479:2093..28221696842506.5371277-CDS-E_fasciculatus_S2_contig8479:2093..2822Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8479 2094..2822 +
1696842506.5545409-CDS-E_fasciculatus_S2_contig8479:3713..38051696842506.5545409-CDS-E_fasciculatus_S2_contig8479:3713..3805Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8479 3714..3805 +
1696842506.5676243-CDS-E_fasciculatus_S2_contig8479:4754..48271696842506.5676243-CDS-E_fasciculatus_S2_contig8479:4754..4827Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8479 4755..4827 +
1696842506.5788715-CDS-E_fasciculatus_S2_contig8479:5237..53331696842506.5788715-CDS-E_fasciculatus_S2_contig8479:5237..5333Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8479 5238..5333 +
1696842506.589432-CDS-E_fasciculatus_S2_contig8479:5814..60421696842506.589432-CDS-E_fasciculatus_S2_contig8479:5814..6042Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8479 5815..6042 +
1696842506.6000881-CDS-E_fasciculatus_S2_contig8479:6527..65511696842506.6000881-CDS-E_fasciculatus_S2_contig8479:6527..6551Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8479 6528..6551 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8479.16605.1

>prot_E_fasciculatus_S2_contig8479.16605.1 ID=prot_E_fasciculatus_S2_contig8479.16605.1|Name=mRNA_E_fasciculatus_S2_contig8479.16605.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=449bp
MTAREGKDAAHRAGMRAGDWQAERQLQEALRESRQEGGPDGVASTPESGG
REEEEEAGFVDTGFHALATNAVEGEEEEEEGEGAAVAEAASSPREPSDGS
SAVAGAAAAGDGSTAAQEDEGGEVEEEEDYGDVELVVTQDGGIIPVAAGA
VGDGSAAAGAKEPPAAEEEKHDHKLAKKAYKGGVRVGIAAEDVGAATAAA
DHVRKNATAMEEEPGEEEEETPLPPDIVLTLPDDVLHRTMLFLNPEDIFE
CRAVSSRWRFPGDESVYEGLCRRTYLAQSAKKMLNVKRWRSWQRMFKFRP
RLRDTGVYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFRFFGDGRVAY
ALTHETPKDFVRMLQQEGSPKVVFGTYTISKWEVNVEIPNPWSWVSFTLQ
LANGERGRFTHLVMLRHSSVSRNDARAGRCHHSVKSTDFFTFQRVWQF*
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mRNA from alignment at E_fasciculatus_S2_contig8479:1486..6634+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8479.16605.1 ID=mRNA_E_fasciculatus_S2_contig8479.16605.1|Name=mRNA_E_fasciculatus_S2_contig8479.16605.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5149bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8479:1486..6634+ (Ectocarpus fasciculatus EfasUO2)
GGCGCCAAAGGCACCGCAAAGGCCGGCAACAATGACACAACCGGCAGCCA
GGTTGTAGTGGACGACGGTAACCTCGGCACCAGCAGTGATGTGGGCAACA
CAAACACCCTGTGGGAGCAGATGACCGCCCGCGAAGGGAAGGACGCCGCT
CACCGGGCGGGCATGAGAGCGGGAGACTGGCAAGCTGAGAGGCAGCTGCA
GGAGGCCCTCCGAGAGAGCCGACAGGTGAGAGCAAATTTAATTTCTAACC
GCTTATTGTGCTTGCAATTCGTGCTTTTGGTTCTTCTCTTTACCTCAATG
GAATCGGGTCACGCCTACAATACGGGGACGAGTACTCGTTTTCGGTTGTT
TTTTTTGGGTGGGTGCGCGAAATCGCCGAATTTTCGCTTTCGGAACGGGG
TGCTTCGGCCCCCTCAAGGGGTGTCGACGTGATACCCCCGCGTCGTCCTT
GTGTTCCCTGTCCCACGATTGACGTGCTGTGGTTGAGGTCTTGCCTTATT
ATTTTCCGATCGATGTCTTGACACAGTTTTGAAGCTGCACGATGCACATC
ATCTCCCTCCCTCCCTCCCTTCCTATGTTCTATGTCTCCGTCTACCCTCT
CTGCTCAGGAGGGTGGCCCTGATGGTGTCGCGTCCACCCCAGAAAGTGGC
GGTAGGGAGGAGGAGGAGGAGGCGGGTTTCGTTGACACCGGCTTCCACGC
CCTCGCGACGAACGCGGTAGAAGGAGAGGAGGAAGAGGAGGAGGGAGAGG
GCGCCGCGGTAGCCGAGGCGGCGTCTTCGCCTAGAGAACCTAGCGACGGG
TCGAGCGCTGTCGCGGGTGCTGCTGCAGCCGGAGACGGCTCTACCGCTGC
TCAGGAAGACGAGGGTGGCGAGGTAGAAGAGGAGGAAGACTACGGCGACG
TCGAGCTCGTAGTCACTCAGGATGGGGGGATCATACCGGTAGCAGCGGGG
GCCGTCGGTGATGGCTCTGCCGCCGCCGGTGCGAAGGAACCGCCGGCGGC
GGAGGAGGAGAAACACGACCACAAGCTGGCGAAGAAGGCCTACAAGGGCG
GGGTAAGGGTGGGGATCGCTGCAGAAGACGTCGGCGCCGCCACTGCCGCC
GCCGATCACGTGCGGAAGAACGCAACGGCGATGGAAGAGGAACCGGGGGA
AGAGGAAGAGGAGACGCCGCTCCCGCCAGACATCGTCCTGACGCTGCCGG
ACGACGTCCTGCACCGCACGATGCTCTTCCTGAACCCGGAAGACATCTTC
GAGTGCCGGGCCGTGAGCTCTCGCTGGAGGTTCCCGGGGGACGAGAGCGT
GTACGAAGGGCTGTGCCGAAGGACTTATCTGGCGCAGGTGACCGCGGGTG
TTCCGCGTGTTTTTTGTTTTCTTTTTTGTTGGCCTTGTCGTCTCGTGAGC
AGTGGTCCCAGTTTTAGAGATACGTATGTGTATATCGCTACCAGCAGAAC
AAATGGGCCATTTTTAGAGGTCAAGAAGCGCGTGGAACGCGACTAGAGTG
ACAGTTCCACCTCCGAAGTCTATGTAGTGGTTCAGGTGGAGACCTCGAAA
CCTTCTGGGCGGCTGGATCGAGACTTCGAGTCCCAGCGAGCGTTATTCGG
CACCCGGTGTCTGGTGCTGTAAAATTCGCCTACAATTCGCACATGTAATC
TGTAGAAGTTAGTCGGTACCTGGTATAGGGGAGGCGTTCGCCCTAGTGCT
CTCGCTTTGATTGTTAAGGCCCGCATCGCAAAGAAATTAGTCTGTTTGAA
ATCACGCATCGGAGCTATATTCATAACAAGGGCGCGACGTACAACCTGCG
AGGGATGACGGTAAAGAGATGATTCGAAGAAATACCAAGCGAGGTTGAAA
TTGGGTAGATCAAGAACAACAGCCTAACGATGACAGCGGATGACAAGCAC
GTTAATGTTGTAGCGGCCAGAATAAAGCCCAAGGCCCAAGGGCCATTCTT
CTTCTGGTACGTTTTAACGAAAGAGGGAAACAGCATCGTCGGCGCTTCTC
CCTTACACCATCCAAGATTTTGATGTGTCCTCCCCTCTCTGCCTTTCATT
GCCCTCCCGGCACACACACGAAAGCACGTACTAGCCTGTCCATTTATCCG
ACCCTCTCCTTGTGAGTTCCAGCGTCTTATTTGGCACCCGTCCATTGCGT
CCGCTGCGGGATGAGACTCAGTATACACCTCCTCCCCGCCTGTGTGGTGC
CGACGTGACTCGTGCCGTCCGCTCGCAGTCTGCCAAGAAGATGCTGAACG
TCAAGCGCTGGCGCTCTTGGCAACGCATGTTCAAGTTCCGCCCCCGGCTC
CGCGACACCGGCGTGTACAGGTAAGTGGTCGGGATCCGTTTACCTGCGTT
CCTTTCTTGCCACGGCCTATGTTATTTCCTGCTGGTTCCCTAGAGAGAGA
GAACATACATGCTATGAAAAAGCCGAGCTGCTGGGGAAATTGGGACACAA
TCTTGGCGGCACACTCATGCCGCGGTCGTGTTCGCGCCTGCTTCTTGCGG
ACAAGCGTCAAACCCTACCGCTTTTTTTAACCTCTCCCCCACAGCTCAAC
CAGCAACGCGTGACAACCGTTCGGTTGGGTCGTATACCGAAGTCACCCCC
TGGCCGTTTCTCCCCATGGGCTACTTCATGAGAGAGAGAGAGAGAGAGTA
GGGGTCTGGCGGGCCAGACGATACTTGTCCGAAAAGCACACCGTTCCGCT
TCGTGACTTGCCCTCTCGCGCGAAAATCGTCAGAGAGCCGCGTTCGCGGA
GCAGGAGAAGGCTCAGCGACGATGGGGGGGAGGGGGGGGGAGGCCATATT
TCAAACTAGAAAAATGTCCTAATTTTGTGCTTGTCCTCTGTTTGTGTTGA
CGTCTCCTTACTGCGGAAGTTGGTGAAGAGTAAAATCATGGAAGCATTTT
GCGGCAAATAAACTGACTGTGTAGGTGCTGCCCTTACGGTTCAGAGGAGA
GGAAAGGCGGACGTCCGTCTGTGATGCTACAACTTTTACAGCCCCGGCCT
GAGGCTACTCTCTGAAGCTAGAACAACGTCGTTTTCATCTGTTGTGCCGC
TGCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCACCCTCCTTCCCTCAGTTAGAAAAACGTTGTTTTTTTTTTTTT
TTCTCTTCCTCCCCCCCCCCCCCCCCCCCTCCCCCCGCCCCCGTGCCCCT
TATCCCGCTCCGCGGGCAGCCTCAAAACTACGTACTTCAAGAAGCCTGTA
AGGGACATGAGTACGGAGTGGACCCCTGGAAAGATCCTCAGGGTGAGTGT
GTGGGCTGTTCCGAGTGAGAGCTAACCTAATCTGTTCATTTGGTCGATCG
AAACTTGAAAGTACGCCAGTAGGACAGTATTTGCTTTGTTGACCTCCGTT
TACCTAGGGCTGTGTTGCTGAGCCATGCGGACGTGGTTCTTGTCTCGCGC
TCATGTTGTGTGGAGCTTGAAGCTCTGCCGAGCTTCGCGAAGAGATCTTA
GGTCGGATGGAAGAAACGTCTTCTTTCTTCTTGTTTTAAACGACAGCTCG
TTTCCGTGCTTAAAAACCTCAGCTCGGCTTCCTTTTGAAAGACACCCATC
GAACGGCCTCGTCTCTACACAGCAGTTTGTACCAAGGTCTGACTTGCCCC
CTCTCCCCACTGCTGTCCACACGCTTTTGCCTTCCCCGCGCCGTGCGTAC
AGGTGACCTACTACCGATACTTTAGATTCTTCGGGGACGGGCGGGTGGCG
TACGCCTTGACCCACGAGACCCCCAAGGATTTCGTCCGCATGCTGCAGGT
GTGTTGTGGGCAGGCAGTGGAAACGTTTGTGTGTATGTGTAGGGAGGGGG
GTTCCGTGCGTGGTTCGTTTTTTAGTGACGGCAAGGATGCGTTGTTGTTT
GTTTACTTGTTGCATTTATGCCTGTGTTTGAATTCTCCGAACAACGATGC
TGCTTGTGCACAGACGTGGCGGAAAGCGTGCTTTGTTGTCCGTTCACGTG
TTGCACTGATGCCTGTGATTTAAAGACTCACGGCAACGACGACGTTCCTT
GTGCACACGATGGAAATGTTTTTGGTGTCTTCATGGACAAGGCTGCGCTT
GTTTTCACGCCGCCCGAACAGTGAAATCACACGCACCGAACTACAATACC
TCGGAAGGAAAGGAATTACCAGGGGGAAGAGTTTCTGTCACACCTACCTT
ATTTTTTGGTTCTCTCTGTCGAACCGAACCCGACGGTTCTGCTGGCTGCG
GTTCTCTTTTCGGAACAAACGTACACGAGCAGGAGGGGTCCCCGAAGGTG
GTGTTCGGCACCTACACCATCAGCAAGTGGGAGGTCAACGTGGAGATCCC
CAACCCCTGGTCGTGGGTGAGCTTCACGCTGCAGCTGGCCAACGGCGAGA
GGGGCCGGTTCACCCACCTGGTGATGCTCCGCCACAGCTCCGTCTCGCGG
AACGACGCCCGGGCCGGCCGCTGCCACCACTCGGTCAAGAGCACCGACTT
CTTCACGGTGAGGATGTGTGCCAGTACCAGTGCATGATCGGTGTTGCTGT
GTCCTTGCCAGGCATTTTTTGGTCTACAGCGTTACGACCAACGTTCGGGC
GTGTTTTTTTTGTTGTGGGCTGTGTGTTGTGGCATCCGGTTATATACGTC
GCGTCAACTACTTTTTGTGCTGCAGCTGAATCTACTTCTGCGCACTGTTT
TGATACCCTTTGCCTGCATTGAACCCCACCTGGCAGTTCAAAACGGAACG
CTTCAGCGCCGCTCAATGATGCCCCTCGCATGCGCTTCTTGGTGATCCCT
TGCCTTGGTCGCTAGCCAAGGCAACCCGGCGTGTTTCAGCAAGAAAAAAG
GCGTGTGCAGTAGCCTGCGCCAGAATTGCCCGGTGGTGATGTCGCACCCT
CGCTTGACCTCCTTTCCTTTTCCACTGCTGTCCTTTCGTGGATTACATCA
CCGTCCTTTTGTTGCCGCTCTCGCTCTCTTTCCCTCTTGCAGTTTCAACG
CGTCTGGCAGTTCTGAACGGGGGCTTGTGGAAATCAAACGCGAACAAGCA
GCAGCACCGTTGGTTGGTCACGTTGGCATTGCCGGAGGGGGGGGGGGGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8479:1486..6634+

>mRNA_E_fasciculatus_S2_contig8479.16605.1 ID=mRNA_E_fasciculatus_S2_contig8479.16605.1|Name=mRNA_E_fasciculatus_S2_contig8479.16605.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1347bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8479:1486..6634+ (Ectocarpus fasciculatus EfasUO2)
ATGACCGCCCGCGAAGGGAAGGACGCCGCTCACCGGGCGGGCATGAGAGC
GGGAGACTGGCAAGCTGAGAGGCAGCTGCAGGAGGCCCTCCGAGAGAGCC
GACAGGAGGGTGGCCCTGATGGTGTCGCGTCCACCCCAGAAAGTGGCGGT
AGGGAGGAGGAGGAGGAGGCGGGTTTCGTTGACACCGGCTTCCACGCCCT
CGCGACGAACGCGGTAGAAGGAGAGGAGGAAGAGGAGGAGGGAGAGGGCG
CCGCGGTAGCCGAGGCGGCGTCTTCGCCTAGAGAACCTAGCGACGGGTCG
AGCGCTGTCGCGGGTGCTGCTGCAGCCGGAGACGGCTCTACCGCTGCTCA
GGAAGACGAGGGTGGCGAGGTAGAAGAGGAGGAAGACTACGGCGACGTCG
AGCTCGTAGTCACTCAGGATGGGGGGATCATACCGGTAGCAGCGGGGGCC
GTCGGTGATGGCTCTGCCGCCGCCGGTGCGAAGGAACCGCCGGCGGCGGA
GGAGGAGAAACACGACCACAAGCTGGCGAAGAAGGCCTACAAGGGCGGGG
TAAGGGTGGGGATCGCTGCAGAAGACGTCGGCGCCGCCACTGCCGCCGCC
GATCACGTGCGGAAGAACGCAACGGCGATGGAAGAGGAACCGGGGGAAGA
GGAAGAGGAGACGCCGCTCCCGCCAGACATCGTCCTGACGCTGCCGGACG
ACGTCCTGCACCGCACGATGCTCTTCCTGAACCCGGAAGACATCTTCGAG
TGCCGGGCCGTGAGCTCTCGCTGGAGGTTCCCGGGGGACGAGAGCGTGTA
CGAAGGGCTGTGCCGAAGGACTTATCTGGCGCAGTCTGCCAAGAAGATGC
TGAACGTCAAGCGCTGGCGCTCTTGGCAACGCATGTTCAAGTTCCGCCCC
CGGCTCCGCGACACCGGCGTGTACAGCCTCAAAACTACGTACTTCAAGAA
GCCTGTAAGGGACATGAGTACGGAGTGGACCCCTGGAAAGATCCTCAGGG
TGACCTACTACCGATACTTTAGATTCTTCGGGGACGGGCGGGTGGCGTAC
GCCTTGACCCACGAGACCCCCAAGGATTTCGTCCGCATGCTGCAGCAGGA
GGGGTCCCCGAAGGTGGTGTTCGGCACCTACACCATCAGCAAGTGGGAGG
TCAACGTGGAGATCCCCAACCCCTGGTCGTGGGTGAGCTTCACGCTGCAG
CTGGCCAACGGCGAGAGGGGCCGGTTCACCCACCTGGTGATGCTCCGCCA
CAGCTCCGTCTCGCGGAACGACGCCCGGGCCGGCCGCTGCCACCACTCGG
TCAAGAGCACCGACTTCTTCACGTTTCAACGCGTCTGGCAGTTCTGA
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