mRNA_E_fasciculatus_S2_contig8468.16594.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8468.16594.1
Unique NamemRNA_E_fasciculatus_S2_contig8468.16594.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8468.16594.1 vs.
Match: Methyl-accepting (transducer domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX4_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 2.340e-61
Identity = 236/309 (76.38%), Postives = 245/309 (79.29%), Query Frame = 1 
Query:    4 AEAAEMEEQLSAVSEALHEEKEGHQEDVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQAALSEANQRLEQALSRSTESERISAELGLEAQQLRERLSEALDEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIDGLKRDLEQASRRLQDNASTLGEQRERCAELQARLAAERTVSEELREGSQALLARAEDAEKTEGEAMAAAAAEARXXXXXXXXXXXXXAELSQLRGRAAEWEEEETRAAELKGTLESTRDALDELRVSAGEAEATAE 930
            AEAAEMEEQLSAV+EALHEEKEGH+EDVE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AALSEANQRLEQALSRSTESERISAELGLEAQQLR+RLSEAL+EAA                          XXXXXXXXXXXXXXXXXXX               AIDGLKRDLEQA+RRLQDNASTL EQRE+CAELQ  LAAERT+SEELREGSQALLARAE AE+              XXXXXXXXXXXXXAELS+LRGRAAEWEEEE RAAELKGTLESTRDALDELRVSAGEAEATAE
Sbjct:   76 AEAAEMEEQLSAVTEALHEEKEGHREDVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSEANQRLEQALSRSTESERISAELGLEAQQLRQRLSEALNEAAVAGNKQAPDNASAAGDGTGDGDTGSAXXXXXXXXXXXXXXXXXXX---------------AIDGLKRDLEQAARRLQDNASTLEEQREQCAELQTSLAAERTISEELREGSQALLARAEGAERXXXXXXXXXXXXXXXXXXXXXXXXXXXAELSRLRGRAAEWEEEERRAAELKGTLESTRDALDELRVSAGEAEATAE 369
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8468.16594.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J2_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 8.290e-45
Identity = 203/309 (65.70%), Postives = 209/309 (67.64%), Query Frame = 1 
Query:    4 AEAAEMEEQLSAVSEALHEEKEGHQEDVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQAALSEANQRLEQALSRSTESERISAELGLEAQQLRERLSEALDEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIDGLKRDLEQASRRLQDNASTLGEQRERCAELQARLAAERTVSEELREGSQALLARAEDAEKTEGEAMAAAAAEARXXXXXXXXXXXXXAELSQLRGRAAEWEEEETRAAELKGTLESTRDALDELRVSAGEAEATAE 930
            AEAA MEEQLSAV+EALHE            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQAAL EANQRLEQALSRSTESERISAELGLE QQLRERLSEALDEAA                 XXXXXXXXX                                 AAIDGLKRDLEQASRRLQDNASTL EQRERCAELQ  LAAERT+S+ELR+GSQALLARAE AE+              XXXXXXXXXXX  AELS+LRGRAAEWEE               RDALDELRVSAGEAEATAE
Sbjct:  182 AEAAGMEEQLSAVTEALHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQAALIEANQRLEQALSRSTESERISAELGLEVQQLRERLSEALDEAAVAGNKEAPDNASAAVGGXXXXXXXXXDSDTGSATAQDSADDSDARTAPEDA--------AAIDGLKRDLEQASRRLQDNASTLEEQRERCAELQTSLAAERTISQELRQGSQALLARAEGAERXXXXXXXXXXXXXXXXXXXXXXXXXADAELSRLRGRAAEWEEXXXXXXXXXXXXXXXRDALDELRVSAGEAEATAE 482
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8468.16594.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Methyl-accepting2.340e-6176.38transducer domain-containing protein n=1 Tax=Ectoc... [more]
Uncharacterized8.290e-4565.70protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8468contigE_fasciculatus_S2_contig8468:705..6659 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop0
Start1
Model size2754
Hectar predicted targeting categoryother localisation
Exons7
Ec32 ortholog descriptionChromosome segregation protein
Ec32 orthologEc-10_000800.1
Cds size2736
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8468.16594.1prot_E_fasciculatus_S2_contig8468.16594.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8468 705..6641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842505.482364-CDS-E_fasciculatus_S2_contig8468:704..17821696842505.482364-CDS-E_fasciculatus_S2_contig8468:704..1782Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8468 705..1782 -
1696842505.4977214-CDS-E_fasciculatus_S2_contig8468:2134..22411696842505.4977214-CDS-E_fasciculatus_S2_contig8468:2134..2241Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8468 2135..2241 -
1696842505.5095994-CDS-E_fasciculatus_S2_contig8468:2799..33211696842505.5095994-CDS-E_fasciculatus_S2_contig8468:2799..3321Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8468 2800..3321 -
1696842505.5203507-CDS-E_fasciculatus_S2_contig8468:3742..38931696842505.5203507-CDS-E_fasciculatus_S2_contig8468:3742..3893Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8468 3743..3893 -
1696842505.5312927-CDS-E_fasciculatus_S2_contig8468:4428..51141696842505.5312927-CDS-E_fasciculatus_S2_contig8468:4428..5114Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8468 4429..5114 -
1696842505.542049-CDS-E_fasciculatus_S2_contig8468:5673..57641696842505.542049-CDS-E_fasciculatus_S2_contig8468:5673..5764Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8468 5674..5764 -
1696842505.552785-CDS-E_fasciculatus_S2_contig8468:6540..66411696842505.552785-CDS-E_fasciculatus_S2_contig8468:6540..6641Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8468 6541..6641 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842505.5715706-UTR-E_fasciculatus_S2_contig8468:6641..66591696842505.5715706-UTR-E_fasciculatus_S2_contig8468:6641..6659Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8468 6642..6659 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8468.16594.1

>prot_E_fasciculatus_S2_contig8468.16594.1 ID=prot_E_fasciculatus_S2_contig8468.16594.1|Name=mRNA_E_fasciculatus_S2_contig8468.16594.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=912bp
MEEQLSAVSEALHEEKEGHQEDVEALRQQLAEERTEGDAEKEGLRQTLQM
LQRELGDQQAALSEANQRLEQALSRSTESERISAELGLEAQQLRERLSEA
LDEAAAAAAGNKQAPDDASPAAVADGGTGGGDTGSAAAQDSADDSDAVAT
TEDPAAATAAAATAAAIDGLKRDLEQASRRLQDNASTLGEQRERCAELQA
RLAAERTVSEELREGSQALLARAEDAEKTEGEAMAAAAAEARRAAEIREA
AELAEAELSQLRGRAAEWEEEETRAAELKGTLESTRDALDELRVSAGEAE
ATAERRLRELQGLLEEACSERDQYRENAASGSEALAEQLRSMEDQHTKSM
DEAASRAETAESTMENLQEAVSQARAQAEAAESEMVTLKEAASQATGRAE
TAESEMETLREAVSQATGRAETAESEMATLREAVSQAAGGAEITESEMET
LREAVSQAEQRAGAAESKIETLDEALAQARGRAEAAETAADGVGEAEVRV
SGMKEENRALEERLARQEAALSQAQAEAEAREAEKSSLTVAIGSLETERD
NLRAEVAKAEGLAAELAAAHEEALLKASQNTDRHTTPESDTPAVTMRTEC
EQDAAAATALVADLRTQLEQDAAAATALVADLRTQLEQEAVAHEEAQTGL
RDKLEEAATSLQEAEEALQGKTQALEETRQDLEETRQNLEGSRQDLEENR
KKIEEFRQDLEGTHQNLEKSQQDLEETRQNLKESRQSLEESIHELEETRQ
SLEETIHELEETRAKMEETEAARAAGDLEVSARAAQEQAEAAASCEAAET
ALALAEEAAATSRAELGAELGSALESLGETRRELDEARRAEGEAQAAVAI
AEERAGEAGGKLEDESARAEAALRQVEELRAALQETGRESEAAAGARAEA
EELRRQLEGTLQ
back to top

mRNA from alignment at E_fasciculatus_S2_contig8468:705..6659-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8468.16594.1 ID=mRNA_E_fasciculatus_S2_contig8468.16594.1|Name=mRNA_E_fasciculatus_S2_contig8468.16594.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5955bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8468:705..6659- (Ectocarpus fasciculatus EfasUO2)
CAGGCCGAGGCTGCAGAGATGGAGGAGCAGCTGTCCGCCGTGAGCGAAGC
TCTGCACGAAGAGAAAGAGGGGCACCAAGAGGACGTAGAGGCCTTGCGGC
AGCAGCTTGCTGAGGAGAGGTAAGCCTGTGGGTCAAATTTCCCCGGAAGG
TGCCGCTTTTCTTTTTTGTTTGTTGCACCACAGGTAGCAGTGATGTTAGT
TTGCCTTACCCGTGCTACCTGAGCGTGTGTGCAGTACACGCCTTCCAACC
TACCACTAACCACTACCACCGTGCGAGCGCGGCCGTTCCAGGGCTGGCGG
GACACTGCAAACTGGTCGTGGTTAGTTATCCAGGGGTATTTATTTGTTTA
CCCATTGAACGTGCGGTACTCGCGTCGCGTCAGCCCGTGCGTTTGGTAAA
GTTTTTCTGAGGTGCAGTATGGTTGGATATACCCCACCTGGTTGTGACCG
TTTGTGTTGCAGGCAATCGAGAGAAGTTTTAACCCTAACCCTGACCCTTG
GCTATACTACCACCGCGGTAGCCGCCCGTGTTTTTTGTGGCTGTTTTCTT
CTTTTGCTCCACTCTGACTGCTGCTTTTGCCGAAACCTTTCTGTCTGGTT
TGTTTTCGCTACGCCGCGCGTGTTTGGTGGTGGTTTTATCCTCCCGGACG
CTGCCTGCAGCATGCGGAAACCCATCCAACACGTTTGTTTTGGGTGATTA
CTTTGTAATTCGCGTTTAAAAGTAATCGTATTACAACTTTTCCCATCTTT
CTCAATATCCGCGCTCGTAACGAACGAAATTGAATGTCAATGGCAGTTCC
GGTTTGAGGGAATTTTAATCCATGTTTAAAATGTGCAAATTTACGATTGT
ACTTTTTTGCACCTTATTTTTTGTTGCTCTTTCGTTTTCTATCAGGACGG
AAGGGGACGCTGAAAAAGAGGGGCTCCGTCAGACCCTGCAGATGCTGCAG
AGGGAGCTGGGGGACCAACAAGCGGCCTTGAGCGAGGTACATACACTATT
TTCAAGCTGTGATGGTTTTGTGGAAGGCTTAAGAAATGGCCGAGGTAGAG
GGTGGGGTGACTGATTCCGGCACGATCTCACCGAAGTGTTTTGTGCGTCG
TTTTGTTTTTTGTTCGGAGAACTCTGCCGTTGCAACCGCGTTGACATACA
TCCCGTTTCAGGCCTGCGATGTGGCTGCTCGATTTTTGCTGTCTTGGGAG
TGGAGACACGATGGTATGAATCGCTTGACGCACGATGCCTTGTGTAATTC
TCTTGGCACAGATAGCGTAATAAAATTGTGTACTTTGAATAGAGCGGGTG
TTCGCTGCAGGGTGAGTGCATCGGAATGGTACATACCCGCCCTACACTTG
TATTAATAGAGGGAGTCCGACCTCATCGGTTCACGTACACGAGTCGGGCA
TTCATCCACTTGACGTAAGCCAGGCAAGACGTCGTGTGGATCAACCCGCA
CACCCGTCTACCCATACCCATTGCCTCACCCGACTACCCTACCACCTTAC
TATTTGGTACCTCCCAACGACAACGACCGCAACGCCGCCGTCCAGGCCAA
CCAGCGGCTGGAGCAAGCGCTATCGAGGAGCACCGAGAGCGAGAGGATCT
CGGCCGAGCTGGGCCTGGAAGCGCAGCAGCTGAGGGAGCGTCTCTCCGAA
GCATTGGACGAGGCCGCCGCCGCCGCCGCCGGTAACAAGCAGGCCCCCGA
TGATGCCTCCCCCGCCGCCGTCGCCGACGGTGGCACCGGAGGCGGCGACA
CCGGCAGCGCTGCCGCCCAAGACAGCGCCGACGATTCCGACGCCGTAGCC
ACCACCGAAGACCCCGCCGCCGCTACCGCCGCCGCCGCTACCGCCGCCGC
CATCGACGGCCTCAAGAGAGATCTGGAGCAGGCCTCCCGTCGGCTCCAGG
ACAACGCCTCCACCCTCGGGGAGCAGCGGGAGCGGTGCGCCGAGCTCCAG
GCCCGCCTCGCCGCCGAGCGGACCGTCTCCGAGGAGCTCCGCGAGGGCTC
GCAGGCGCTGCTTGCCAGGGCGGAGGACGCCGAGAAGACGGAGGGGGAGG
CCATGGCGGCGGCGGCGGCGGAGGCCAGGCGAGCGGCGGAGATAAGGGAG
GCGGCGGAGCTGGCGGAAGCCGAGCTGTCTCAATTGCGCGGGCGCGCGGC
GGAGTGGGAGGAGGAGGAGACCAGGGCGGCAGAGCTCAAGGGCACGCTGG
AGTCCACGAGGGACGCGCTGGATGAGCTGAGGTAGGGGGGGTCAGCCGTG
TTTTGTGGTGTGAGGGGGGAGCGGGGGGAGTGAAATTCTTTATTTTTTTG
GGCCATGGTATTTTTTTGTGCCATGGTTTCATGGCGTCTTTATGGTTTGT
GTGTGACGATACCGAGACCATAGGACTGACGAACGGTTCCATTGGTCAGC
CGGCGAGCGCGGTTGTTGCTAATCCATTTAAGCACACAAATGGATGAGAC
CTGTCTGTCGCACCCCTTTTCGATCGAGGTCGATCGTATCGTGGTTAGTT
TTGTCTTTCGTTGGGTGACGAGTTGCGTTCTGGAAAGGTGTGCCCCCTAT
TTGTGGGGCAGTTGGCTTGTGACCACGGAAGGAAGGCGTCCCCGTCAGTT
GGACCAGCACGGACATTAGAAGGTACTGAGCGGAGACCGGTACGGTTTTT
GATGTACAGACAACAACAACAACAAGCACATACCGCATCTGATACCTTCA
CTTCATCCAAGCCGCCCTCGTTGCCTTGGGACTGCGCCTCTTGTGCCTCA
CATGACCGGCACTCAGGGTGTCAGCGGGCGAGGCTGAAGCCACCGCTGAG
CGTCGGCTGAGAGAGCTACAGGGGCTCCTGGAGGAGGCGTGTTCGGAAAG
GGACCAGTACCGGGAGAACGCCGCGTCCGGCTCCGAAGCGCTGGCAGAGC
AACTCCGCTCCATGGAGGTAAGAGAATGCCGCCGCATGCGACACAACAAC
ACCGCCGTAGGTTTTGCATGAGACGAACACACACGCTACACCAAAAACAC
CAATGTAGTCAGGTTGAGGCCTAGAGGGTCTTGAACAATGGGCAATAAAC
CCTGCACACGATTTTAGGTCTAACCTGTGTCCCGAGGGCTTCGTCTTCTG
TCGTCCGTCACAACGGCGGTGCAGCCACGGTCGTCTATCAACAACATACA
TGTATTTACCAGGGTGTAGACGTAGTATGACCCGTTACCCATAGTCTTAA
ACCCAAACACTACCTAACCTATGACTCCGTAATCTTAAACCCAAACAGCA
GTAGCCAGGGTTCTTGGCCATGTGTCTCCGTTCACGGACGTAGCGCCGGT
TGGTTCTGAACCCCTTTCCCTCTCTCCCCTCTTCGTAGGACCAGCACACG
AAGAGCATGGACGAAGCGGCATCGCGAGCGGAGACAGCTGAGTCGACGAT
GGAGAACCTCCAGGAGGCGGTGTCTCAAGCCAGGGCACAGGCCGAAGCCG
CCGAATCAGAGATGGTCACCCTAAAAGAGGCCGCGTCGCAAGCAACGGGG
CGGGCGGAGACTGCCGAGTCGGAGATGGAAACCCTGAGGGAGGCGGTGTC
ACAAGCAACGGGAAGGGCGGAGACTGCCGAGTCGGAGATGGCGACCTTAA
GGGAGGCTGTGTCGCAAGCGGCTGGGGGGGCGGAGATCACCGAGTCGGAG
ATGGAAACCTTAAGGGAGGCTGTGTCGCAAGCGGAGCAGCGGGCGGGTGC
GGCGGAGTCGAAAATTGAAACCCTTGATGAGGCGTTGGCTCAAGCAAGGG
GGCGAGCGGAAGCGGCGGAGACTGCGGCTGACGGGGTTGGTGAAGCGGAG
GTGCGGGTATCGGGGATGAAGGAGGAGAATCGGGCCCTGGAGGAGCGGCT
GGCTCGCCAGGTAAAAATATGTCCGTTGATGTTGTTTGGTTTTGTCTGGA
CTGTTTTTAGGTGGTAGTGGTTGTGTTGATGGCCGTGGTTGTGCCGTCGG
AGGTGTGGGAGGAGAATCGCGAACGGCTTGCTCGCGGGGTACAAAGAAGC
GCATTGATGTTGTTTGGTTTGGTCTTGGCTGTTAGTGGGTGGTGGTGATG
ACGGTGTTGGTAGTCGTAGTGGTGCCGTCGGAGGTGAAGGGGGAGCATCG
CGCACGCCTTGCTCGCGGGGTGCTAATCTTAGTGTAATCTTATCCCTTTG
ATGTTGTTTTTGGATTGTCTATGCTGTACCTGGTAGTGGGTGGCGGTGGC
GGTGGTGGCGGTGTAGTGGTAGTCGTGGTGATGCCGGCAATGCTGTCGGT
GTTGAGGCGGCTCCATCGCTGCGCTCGCACGGCAACTTTTGTGGCACACG
GTCAGGCATACACGTGGTGGCATTGGTCTCAACAAGAGTCCTTGCTCTTT
GCTACCACCCTTGTTTGCGCTCCTCGTCCTGATATATATGTACGGTTCCG
TTCATATGTATCTGGCAGGAAGCAGCGTTGTCGCAGGCGCAGGCTGAGGC
GGAGGCCCGGGAAGCGGAGAAATCTTCGCTAACGGTCGCAATAGGGTCTC
TTGAAACTGAGAGGGACAACTTGAGGTGAGCAAAGCGTGTGGGCGGAGGG
GGTTCCCAGGAACGCTGCTGGTGCTGCTGGTGCTGCAGCTGCTGCCGCCA
CCGGTTGTGGTTGTGTTATTGCTGCTGCTTGTGTTCGTAGCTGGAGTTGC
TGTGTTGTTGTTGCTGCTTGTGGTTGCTGCTGCTGTTGCTATTGCTTTTG
CTTTTTTGCTGTTTTGTTGTTGCTGCTTGTGGTTGTTTTGCTGCTGTTGC
TGTCTCCGTGTGTGCGATACTGGTTTTTGCTTCTTGTCGTTATGGTCATC
GTTGCAGTTGTCGCTGCTACTATCGTCCCCGCTTCTGACGTTATCCCTGC
TGTCGTCTGTCGATTCATGCTCTCCAGGGCCGAGGTCGCCAAGGCTGAAG
GACTTGCCGCAGAGCTGGCGGCGGCCCACGAGGAAGCGCTGCTCAAGGCT
TCCCAAAACACGGACCGGCACACAACTCCCGAAAGCGACACCCCAGCGGT
GACGATGCGGACGGAATGCGAGCAAGACGCGGCTGCTGCGACCGCTCTAG
TCGCCGACCTCCGCACGCAACTCGAGCAAGACGCGGCTGCTGCGACCGCG
CTAGTCGCCGACCTCCGCACGCAACTCGAGCAAGAGGCGGTGGCGCACGA
GGAGGCGCAGACGGGGTTGCGGGATAAGCTCGAAGAGGCGGCGACGAGCC
TGCAGGAGGCGGAGGAGGCACTGCAAGGGAAGACGCAGGCTTTGGAAGAG
ACCCGGCAGGATCTGGAAGAAACCCGGCAAAATCTGGAAGGGAGTCGTCA
GGATCTGGAAGAAAATCGGAAGAAAATTGAAGAATTCCGTCAGGATCTGG
AAGGAACCCATCAAAATCTGGAAAAATCCCAGCAGGATCTGGAAGAAACC
CGTCAAAACCTGAAAGAATCCCGCCAAAGCCTGGAAGAATCCATACACGA
GCTGGAAGAAACCCGTCAGAGTCTGGAAGAAACCATACACGAGCTGGAAG
AGACGAGGGCGAAGATGGAGGAGACGGAAGCGGCCCGCGCCGCCGGCGAC
CTCGAGGTTTCGGCAAGAGCCGCGCAAGAGCAAGCGGAAGCGGCGGCGAG
CTGCGAGGCTGCGGAGACAGCCCTCGCCCTAGCCGAGGAAGCAGCGGCCA
CGAGCCGGGCGGAGCTGGGAGCGGAGCTAGGCTCCGCGCTAGAGTCGCTG
GGCGAGACGCGGCGGGAGTTGGACGAGGCCAGGCGGGCGGAAGGAGAGGC
CCAGGCCGCCGTCGCCATCGCGGAAGAGCGGGCGGGGGAGGCCGGCGGTA
AGCTGGAGGACGAGAGCGCTCGCGCGGAGGCCGCGCTGAGGCAGGTGGAG
GAGCTGAGGGCGGCGTTGCAGGAGACGGGCAGGGAGAGCGAGGCGGCGGC
CGGGGCGAGGGCGGAGGCGGAGGAGCTGCGGCGGCAGCTGGAGGGCACGC
TGCAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8468:705..6659-

>mRNA_E_fasciculatus_S2_contig8468.16594.1 ID=mRNA_E_fasciculatus_S2_contig8468.16594.1|Name=mRNA_E_fasciculatus_S2_contig8468.16594.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2736bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8468:705..6659- (Ectocarpus fasciculatus EfasUO2)
ATGGAGGAGCAGCTGTCCGCCGTGAGCGAAGCTCTGCACGAAGAGAAAGA
GGGGCACCAAGAGGACGTAGAGGCCTTGCGGCAGCAGCTTGCTGAGGAGA
GGACGGAAGGGGACGCTGAAAAAGAGGGGCTCCGTCAGACCCTGCAGATG
CTGCAGAGGGAGCTGGGGGACCAACAAGCGGCCTTGAGCGAGGCCAACCA
GCGGCTGGAGCAAGCGCTATCGAGGAGCACCGAGAGCGAGAGGATCTCGG
CCGAGCTGGGCCTGGAAGCGCAGCAGCTGAGGGAGCGTCTCTCCGAAGCA
TTGGACGAGGCCGCCGCCGCCGCCGCCGGTAACAAGCAGGCCCCCGATGA
TGCCTCCCCCGCCGCCGTCGCCGACGGTGGCACCGGAGGCGGCGACACCG
GCAGCGCTGCCGCCCAAGACAGCGCCGACGATTCCGACGCCGTAGCCACC
ACCGAAGACCCCGCCGCCGCTACCGCCGCCGCCGCTACCGCCGCCGCCAT
CGACGGCCTCAAGAGAGATCTGGAGCAGGCCTCCCGTCGGCTCCAGGACA
ACGCCTCCACCCTCGGGGAGCAGCGGGAGCGGTGCGCCGAGCTCCAGGCC
CGCCTCGCCGCCGAGCGGACCGTCTCCGAGGAGCTCCGCGAGGGCTCGCA
GGCGCTGCTTGCCAGGGCGGAGGACGCCGAGAAGACGGAGGGGGAGGCCA
TGGCGGCGGCGGCGGCGGAGGCCAGGCGAGCGGCGGAGATAAGGGAGGCG
GCGGAGCTGGCGGAAGCCGAGCTGTCTCAATTGCGCGGGCGCGCGGCGGA
GTGGGAGGAGGAGGAGACCAGGGCGGCAGAGCTCAAGGGCACGCTGGAGT
CCACGAGGGACGCGCTGGATGAGCTGAGGGTGTCAGCGGGCGAGGCTGAA
GCCACCGCTGAGCGTCGGCTGAGAGAGCTACAGGGGCTCCTGGAGGAGGC
GTGTTCGGAAAGGGACCAGTACCGGGAGAACGCCGCGTCCGGCTCCGAAG
CGCTGGCAGAGCAACTCCGCTCCATGGAGGACCAGCACACGAAGAGCATG
GACGAAGCGGCATCGCGAGCGGAGACAGCTGAGTCGACGATGGAGAACCT
CCAGGAGGCGGTGTCTCAAGCCAGGGCACAGGCCGAAGCCGCCGAATCAG
AGATGGTCACCCTAAAAGAGGCCGCGTCGCAAGCAACGGGGCGGGCGGAG
ACTGCCGAGTCGGAGATGGAAACCCTGAGGGAGGCGGTGTCACAAGCAAC
GGGAAGGGCGGAGACTGCCGAGTCGGAGATGGCGACCTTAAGGGAGGCTG
TGTCGCAAGCGGCTGGGGGGGCGGAGATCACCGAGTCGGAGATGGAAACC
TTAAGGGAGGCTGTGTCGCAAGCGGAGCAGCGGGCGGGTGCGGCGGAGTC
GAAAATTGAAACCCTTGATGAGGCGTTGGCTCAAGCAAGGGGGCGAGCGG
AAGCGGCGGAGACTGCGGCTGACGGGGTTGGTGAAGCGGAGGTGCGGGTA
TCGGGGATGAAGGAGGAGAATCGGGCCCTGGAGGAGCGGCTGGCTCGCCA
GGAAGCAGCGTTGTCGCAGGCGCAGGCTGAGGCGGAGGCCCGGGAAGCGG
AGAAATCTTCGCTAACGGTCGCAATAGGGTCTCTTGAAACTGAGAGGGAC
AACTTGAGGGCCGAGGTCGCCAAGGCTGAAGGACTTGCCGCAGAGCTGGC
GGCGGCCCACGAGGAAGCGCTGCTCAAGGCTTCCCAAAACACGGACCGGC
ACACAACTCCCGAAAGCGACACCCCAGCGGTGACGATGCGGACGGAATGC
GAGCAAGACGCGGCTGCTGCGACCGCTCTAGTCGCCGACCTCCGCACGCA
ACTCGAGCAAGACGCGGCTGCTGCGACCGCGCTAGTCGCCGACCTCCGCA
CGCAACTCGAGCAAGAGGCGGTGGCGCACGAGGAGGCGCAGACGGGGTTG
CGGGATAAGCTCGAAGAGGCGGCGACGAGCCTGCAGGAGGCGGAGGAGGC
ACTGCAAGGGAAGACGCAGGCTTTGGAAGAGACCCGGCAGGATCTGGAAG
AAACCCGGCAAAATCTGGAAGGGAGTCGTCAGGATCTGGAAGAAAATCGG
AAGAAAATTGAAGAATTCCGTCAGGATCTGGAAGGAACCCATCAAAATCT
GGAAAAATCCCAGCAGGATCTGGAAGAAACCCGTCAAAACCTGAAAGAAT
CCCGCCAAAGCCTGGAAGAATCCATACACGAGCTGGAAGAAACCCGTCAG
AGTCTGGAAGAAACCATACACGAGCTGGAAGAGACGAGGGCGAAGATGGA
GGAGACGGAAGCGGCCCGCGCCGCCGGCGACCTCGAGGTTTCGGCAAGAG
CCGCGCAAGAGCAAGCGGAAGCGGCGGCGAGCTGCGAGGCTGCGGAGACA
GCCCTCGCCCTAGCCGAGGAAGCAGCGGCCACGAGCCGGGCGGAGCTGGG
AGCGGAGCTAGGCTCCGCGCTAGAGTCGCTGGGCGAGACGCGGCGGGAGT
TGGACGAGGCCAGGCGGGCGGAAGGAGAGGCCCAGGCCGCCGTCGCCATC
GCGGAAGAGCGGGCGGGGGAGGCCGGCGGTAAGCTGGAGGACGAGAGCGC
TCGCGCGGAGGCCGCGCTGAGGCAGGTGGAGGAGCTGAGGGCGGCGTTGC
AGGAGACGGGCAGGGAGAGCGAGGCGGCGGCCGGGGCGAGGGCGGAGGCG
GAGGAGCTGCGGCGGCAGCTGGAGGGCACGCTGCAG
back to top