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Homology
BLAST of mRNA_E_fasciculatus_S2_contig8447.16579.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W3_ECTSI) HSP 1 Score: 711 bits (1834), Expect = 3.380e-247 Identity = 381/458 (83.19%), Postives = 404/458 (88.21%), Query Frame = 1
Query: 1 GGGGRDITTLLGLLLRVGIHPSPPSLPSAESHEAKQPPSHEREHMSESAQEREEAGNTEGKHWGVSSAAKEENPRWEEFGGDPGRLVSDYTVRLLRALVSMSKARSYILGERCGETIETLAELLRGDNYQETSLAKRLVGVLERLSRHRSAREAIASSSLIDWAAKMLESCSSQGAGARDPCPLFVLRVTEILGNTSGSVSGRTAALAASPDLLSSLGNLLEHDDTQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGGENNDS-----IKSLLDLMVDTIDPDAEGGENALHQFSEPDAGGGQEDAGDSDFLSDEESEEAPLVSYYVQVTNAPCGENLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTKPPAWCPGAGESKGVDNDIPRIPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPVGSISVSDPL 1359
GGGGR ++TLLG+LLR+G+ PSPPSLPSAESHEAKQ PSHE +H AQ EEAGNTE VSS KEENPRWEEFGGDPGRLV+DYTVRLL ALVSMSKARSY+LGE+C ETIE LAELL G+NY+ETSLAKRL+GVLERLSR RSA+EAIASSS +DWAAKML SCSSQG GARDPCPLFVLRVT ILGNTSGSVSGRTAALAASPDLL S GNLLEHDD QVRTSAVRGLKLLLGARE RERAL MGMDALLQNLGSC+G +NNDS I+SLLDLM DT+DPDAE GE+ Q SE GGGQEDAGDSDFLSDEES EAP+VS+YVQVTNAPCGE LLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTK PA CPGAGESKG +N PR+PTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTP GSISVSDPL
Sbjct: 252 GGGGRGVSTLLGVLLRLGVRPSPPSLPSAESHEAKQQPSHEPKHT---AQAPEEAGNTEDGAKRVSSGTKEENPRWEEFGGDPGRLVADYTVRLLSALVSMSKARSYMLGEKCEETIEILAELLSGENYRETSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLLSCSSQGPGARDPCPLFVLRVTGILGNTSGSVSGRTAALAASPDLLRSFGNLLEHDDAQVRTSAVRGLKLLLGAREGRERALEMGMDALLQNLGSCEGSDNNDSAFEHNIQSLLDLMGDTLDPDAEEGEDGRRQLSES-GGGGQEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTKAPARCPGAGESKGANNHTPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPAGSISVSDPL 705
BLAST of mRNA_E_fasciculatus_S2_contig8447.16579.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS9_9PHAE) HSP 1 Score: 446 bits (1146), Expect = 1.500e-141 Identity = 260/407 (63.88%), Postives = 279/407 (68.55%), Query Frame = 1
Query: 193 VSSAAKEENPRWEEFGGDPGRLVSDYTVRLLRALVSMSKARSYILGE----------------------------------------------------------------------------RCGETIETLAELLRGDNYQETSLAKRLVGVLERLSRHRSAREAIASSSLIDWAAKMLESCSSQGAGARDPCPLFVLRVTEILGNTSGSVSGRTAALAASPDLLSSLGNLLEHDDTQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGGENNDS-----IKSLLDLMVDTIDPDAEGGENALHQFSEPDA---GGGQEDAGDSDFLSDEESEEAPLVSYYVQVTNAPCGENLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTKPPAW 1161
VS KEEN RWEEFGGDPGRLV+DYTVRLL ALVSMSKARSY+LGE C ETIETL ELL G+ YQ+TSLAKRL+GVLERLSR RSA+EAIASSS +DWAAKMLESCS QGAG R PCPLFVLRVT+ILGN SG VSGRTAALAASPDLL S GNLLEHDD QVR SAVRGLKLLLGAREARERAL MGMDALLQNLGSC+G +N+DS I+ + ++DT+ GG L + A GGGQEDAGDSDFLSDEES EAP+VS+YVQVTNAPCGE LLRERYRLSTAEAKEEAIACSSGGA WGGEEEELVCGGIRTKPPAW
Sbjct: 477 VSLGPKEENLRWEEFGGDPGRLVADYTVRLLSALVSMSKARSYMLGEVRNEELSYSDLSRGHLSPCAISALLVVFQRAARPREELEIPLPWPRVPAGVGRWYGKRTSQMWPHAVDEKLRGCGPLCEETIETLVELLSGEKYQKTSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLESCSFQGAGTRHPCPLFVLRVTDILGNVSGRVSGRTAALAASPDLLRSFGNLLEHDDAQVRASAVRGLKLLLGAREARERALEMGMDALLQNLGSCEGSDNSDSAFEHNIQVKREQVIDTV-----GGGGILWAVNGIHAEVTGGGQEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGATWGGEEEELVCGGIRTKPPAW 878
BLAST of mRNA_E_fasciculatus_S2_contig8447.16579.1 vs.
Match: Armadillo (repeat containing 9 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9U4N2_SCLFO) HSP 1 Score: 58.9 bits (141), Expect = 1.820e-5 Identity = 51/205 (24.88%), Postives = 95/205 (46.34%), Query Frame = 1
Query: 256 LVSDYTVRLLRALVSMSKARSYILGERCGETIETLAELLRG--DNYQETSLAKR-LVGVLERLSRHRSAREAIASSSLIDWAAKMLES--CSSQGAGARDPCPLFVLRV-TEILGNTSGSVSGRTAALAASPDLLSSLGNLLEHDDTQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGGENNDSIKSLLDLMVDTI 852
+V Y RL+ A S+ + R+Y+ I L ++L G + + S+A+ ++G L++LS R+ + A+ LI W L++ C S + L T +L N G++ A + +LS+L +LL H++ ++R R L +LG R+ A MG++ +L+ C + N ++ ++ I
Sbjct: 93 IVRQYVARLINAFASLPEGRTYL------SQIPPLLKILEGALETEGKDSVARENVLGALQKLSLRRAQQSAMIEDGLISWLVDELQNSDCLSD----------YTLEYSTALLMNLCFRSQGKSKCAANAKHILSTLSDLLAHENHEIRPYVNRALYSILGVPAIRDEAREMGLEEILR----CYSKDKNTEFSQQIEFIIKQI 277
BLAST of mRNA_E_fasciculatus_S2_contig8447.16579.1 vs.
Match: LisH (domain-containing protein ARMC9 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7V1Q6_SCLFO) HSP 1 Score: 58.9 bits (141), Expect = 2.870e-5 Identity = 51/205 (24.88%), Postives = 95/205 (46.34%), Query Frame = 1
Query: 256 LVSDYTVRLLRALVSMSKARSYILGERCGETIETLAELLRG--DNYQETSLAKR-LVGVLERLSRHRSAREAIASSSLIDWAAKMLES--CSSQGAGARDPCPLFVLRV-TEILGNTSGSVSGRTAALAASPDLLSSLGNLLEHDDTQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGGENNDSIKSLLDLMVDTI 852
+V Y RL+ A S+ + R+Y+ I L ++L G + + S+A+ ++G L++LS R+ + A+ LI W L++ C S + L T +L N G++ A + +LS+L +LL H++ ++R R L +LG R+ A MG++ +L+ C + N ++ ++ I
Sbjct: 393 IVRQYVARLINAFASLPEGRTYL------SQIPPLLKILEGALETEGKDSVARENVLGALQKLSLRRAQQSAMIEDGLISWLVDELQNSDCLSD----------YTLEYSTALLMNLCFRSQGKSKCAANAKHILSTLSDLLAHENHEIRPYVNRALYSILGVPAIRDEAREMGLEEILR----CYSKDKNTEFSQQIEFIIKQI 577
BLAST of mRNA_E_fasciculatus_S2_contig8447.16579.1 vs.
Match: LisH (domain-containing protein ARMC9 n=6 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9R8T4_SCLFO) HSP 1 Score: 58.9 bits (141), Expect = 3.220e-5 Identity = 51/205 (24.88%), Postives = 95/205 (46.34%), Query Frame = 1
Query: 256 LVSDYTVRLLRALVSMSKARSYILGERCGETIETLAELLRG--DNYQETSLAKR-LVGVLERLSRHRSAREAIASSSLIDWAAKMLES--CSSQGAGARDPCPLFVLRV-TEILGNTSGSVSGRTAALAASPDLLSSLGNLLEHDDTQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGGENNDSIKSLLDLMVDTI 852
+V Y RL+ A S+ + R+Y+ I L ++L G + + S+A+ ++G L++LS R+ + A+ LI W L++ C S + L T +L N G++ A + +LS+L +LL H++ ++R R L +LG R+ A MG++ +L+ C + N ++ ++ I
Sbjct: 408 IVRQYVARLINAFASLPEGRTYL------SQIPPLLKILEGALETEGKDSVARENVLGALQKLSLRRAQQSAMIEDGLISWLVDELQNSDCLSD----------YTLEYSTALLMNLCFRSQGKSKCAANAKHILSTLSDLLAHENHEIRPYVNRALYSILGVPAIRDEAREMGLEEILR----CYSKDKNTEFSQQIEFIIKQI 592
BLAST of mRNA_E_fasciculatus_S2_contig8447.16579.1 vs.
Match: LisH (domain-containing protein ARMC9 n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QQX0_PSEPJ) HSP 1 Score: 58.9 bits (141), Expect = 3.410e-5 Identity = 57/211 (27.01%), Postives = 98/211 (46.45%), Query Frame = 1
Query: 259 VSDYTVRLLRALVSMSKARSYILGERCGETIETLAELLRGDNYQETSLAKRLVGVLERLSRHRSAREAIASSSLIDWAAKMLESCSSQGAGARDPCPLFVLR-VTEILGNTSGSVSGRTAALAASPDLLSSLGNLLEHDDTQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGGENNDS-IKSLLDLMVDTIDPDAEGGENAL 885
+ + TV+L+ L S RSY++ + + + L ++L+ D QE + K +G L++LS R + + LI W + L++ +D + T + N S G+T A ++L L +LLEH++ QVRT L LL RE+A MGM +L L EN+D K + ++D + + + +A+
Sbjct: 402 IKEQTVKLVNQLASDFYGRSYLV--KYPQLVLNLIQVLK-DQPQENLIRKNALGALQKLSLRRKPQIVMIEHDLIKWIVQTLKN-------EKDSLSEYSQEYATALFMNLSLRSLGKTKAQDPKEEVLVVLNDLLEHENMQVRTFVNGTLYSLLSRHSLREQAKAMGMGDILNYLK-----ENSDERFKKQIQYIMDQLSQEKQEDNDAM 597
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8447.16579.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
| Match Name | E-value | Identity | Description | |
|---|
| Uncharacterized | 3.380e-247 | 83.19 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 1.500e-141 | 63.88 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Armadillo | 1.820e-5 | 24.88 | repeat containing 9 n=1 Tax=Scleropages formosus T... | [more] |
| LisH | 2.870e-5 | 24.88 | domain-containing protein ARMC9 n=1 Tax=Scleropage... | [more] |
| LisH | 3.220e-5 | 24.88 | domain-containing protein ARMC9 n=6 Tax=Scleropage... | [more] |
| LisH | 3.410e-5 | 27.01 | domain-containing protein ARMC9 n=1 Tax=Pseudocohn... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 64.3 |
| Seed ortholog evalue | 1.7e-07 |
| Seed eggNOG ortholog | 5911.EAR84160 |
| Preferred name | ARMC9 |
| Model size | 2161 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005815,GO:0005856,GO:0005929,GO:0006996,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0036064,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0060271,GO:0070925,GO:0071840,GO:0120025,GO:0120031,GO:0120036,GO:0120038 |
| Exons | 11 |
| EggNOG free text desc. | cilium assembly |
| EggNOG OGs | 2C02H@1,2QQ9W@2759,3ZDI5@5878 |
| Cds size | 1368 |
| COG Functional cat. | S |
| Best tax level | Ciliophora |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842503.785659-UTR-E_fasciculatus_S2_contig8447:645..1306 | 1696842503.785659-UTR-E_fasciculatus_S2_contig8447:645..1306 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig8447 646..1306 - |
| 1696842503.9474826-UTR-E_fasciculatus_S2_contig8447:6553..6685 | 1696842503.9474826-UTR-E_fasciculatus_S2_contig8447:6553..6685 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig8447 6554..6685 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842503.7997506-CDS-E_fasciculatus_S2_contig8447:1306..1445 | 1696842503.7997506-CDS-E_fasciculatus_S2_contig8447:1306..1445 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 1307..1445 - |
| 1696842503.8116157-CDS-E_fasciculatus_S2_contig8447:1536..1637 | 1696842503.8116157-CDS-E_fasciculatus_S2_contig8447:1536..1637 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 1537..1637 - |
| 1696842503.8321588-CDS-E_fasciculatus_S2_contig8447:1895..1995 | 1696842503.8321588-CDS-E_fasciculatus_S2_contig8447:1895..1995 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 1896..1995 - |
| 1696842503.8434486-CDS-E_fasciculatus_S2_contig8447:2146..2304 | 1696842503.8434486-CDS-E_fasciculatus_S2_contig8447:2146..2304 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 2147..2304 - |
| 1696842503.8558831-CDS-E_fasciculatus_S2_contig8447:2965..3060 | 1696842503.8558831-CDS-E_fasciculatus_S2_contig8447:2965..3060 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 2966..3060 - |
| 1696842503.8688037-CDS-E_fasciculatus_S2_contig8447:3284..3369 | 1696842503.8688037-CDS-E_fasciculatus_S2_contig8447:3284..3369 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 3285..3369 - |
| 1696842503.8790143-CDS-E_fasciculatus_S2_contig8447:3765..3905 | 1696842503.8790143-CDS-E_fasciculatus_S2_contig8447:3765..3905 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 3766..3905 - |
| 1696842503.8966973-CDS-E_fasciculatus_S2_contig8447:4397..4581 | 1696842503.8966973-CDS-E_fasciculatus_S2_contig8447:4397..4581 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 4398..4581 - |
| 1696842503.9105406-CDS-E_fasciculatus_S2_contig8447:4948..5113 | 1696842503.9105406-CDS-E_fasciculatus_S2_contig8447:4948..5113 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 4949..5113 - |
| 1696842503.9267185-CDS-E_fasciculatus_S2_contig8447:5537..5681 | 1696842503.9267185-CDS-E_fasciculatus_S2_contig8447:5537..5681 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 5538..5681 - |
| 1696842503.9383833-CDS-E_fasciculatus_S2_contig8447:6496..6553 | 1696842503.9383833-CDS-E_fasciculatus_S2_contig8447:6496..6553 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8447 6497..6553 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8447.16579.1 >prot_E_fasciculatus_S2_contig8447.16579.1 ID=prot_E_fasciculatus_S2_contig8447.16579.1|Name=mRNA_E_fasciculatus_S2_contig8447.16579.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=456bp
MSESAQEREEAGNTEGKHWGVSSAAKEENPRWEEFGGDPGRLVSDYTVRL
LRALVSMSKARSYILGERCGETIETLAELLRGDNYQETSLAKRLVGVLER
LSRHRSAREAIASSSLIDWAAKMLESCSSQGAGARDPCPLFVLRVTEILG
NTSGSVSGRTAALAASPDLLSSLGNLLEHDDTQVRTSAVRGLKLLLGARE
ARERALGMGMDALLQNLGSCKGGENNDSIKSLLDLMVDTIDPDAEGGENA
LHQFSEPDAGGGQEDAGDSDFLSDEESEEAPLVSYYVQVTNAPCGENLLR
ERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTKPPAWCPGAGES
KGVDNDIPRIPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPV
GSISVSDPLDTTLHLDLGSFGGAETVAWPSQRPNGVARSSCLPSQNTHTR
LSHVR* back to topmRNA from alignment at E_fasciculatus_S2_contig8447:646..6685- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8447.16579.1 ID=mRNA_E_fasciculatus_S2_contig8447.16579.1|Name=mRNA_E_fasciculatus_S2_contig8447.16579.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6040bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8447:646..6685- (Ectocarpus fasciculatus EfasUO2)
GGCGGAGGAGGCAGAGATATCACGACCCTTCTCGGGCTCCTTCTTCGTGT
GGGAATACACCCATCGCCGCCATCCCTGCCGTCCGCCGAGAGCCACGAAG
CCAAGCAGCCGCCGTCACACGAACGGGAGCACATGAGCGAATCGGCTCAG
GAGCGGGAAGAGGCAGGAAACACGGAAGGCAAGCATTGGGTGGCCGTGGG
GCTAGTAGAAGGGGGGGGAGTACTCCCAAGAGAACAGGTGCTTCTCCGCC
TCGAACGCGCCTAGGAAAAGGGGGATTCAGACGATGCGTCAGGACGCAAG
AAGCACGGATCTTGATCTTTGGCCGGGTATTGGTAATAGCCTTGTTGGAA
ATGGGACAAATAGATGCTTGCCGGATGAGATGGGGGGGGTGAGGATAGCT
TCCCTCAGCGTTTAGAAAGATTCTCTTCGGTCTTGCCGATCACCTGCCGA
AGTATTTTCACCGTGGCTCTGCGTTTAGTGGTCCAAGTCGGAAATTTGTA
CCGAGAGGCTGCAGGAACCGCATTAGACACAACGGGAAGGGAAGAAAAAC
ACGACCAATCTTCATATGTGAACGTTAATATGAATATCTACCCGTGCGGT
CTCAATGGTGGGACAGGCTCAAATGATGTCAATCACGCTCCCAACCAAAC
TAGTAGATGTAGCGAAATCTGTTTTTCGGCCCGAACCATCGCGTTTCGGT
TGAAGGGGGCTGCAGCGAGACGGGAGGGGACAAGACACGGCGGTGTGAGG
ATGTGAATCATACAGACGCCACCCCCCAAGTAGAGGAAAAGAGACTGTAT
TGAGGACTGGAACATGTCGTCTGGAAAACACACACCTTCAAACGAGAAAG
CTGTACTTTTCGTTGAGAAAGGAGAAAACTTGAACTTGCTTCACGTTTGT
ATGGGGTGTCCTAAGCACATGCATTTAAGCCTGTTGACGATTTCTCGCCG
GCCGAACGACCTATTTCTTCCCCCGCCACCACTTCTACAGCAGACGGCGC
GAAGGGGGTGTCGTCGGCAGCAAAGGAAGAAAATCCGAGGTGGGAAGAGT
TTGGTGGGGACCCCGGTCGGCTGGTGTCCGACTACACGGTCAGGTTGCTG
AGGGCGCTCGTCTCCATGAGCAAAGCTCGCTCCTATATATTGGGCGAGGT
GAGGAACGAAAGAACTGTGACGTTTTCCGTCTTCTCTGATTTGTCACGAG
GCAATCTATCTCCCTGCTTGTTGCTCAGAGAGGCTTTAAGACCACAAGAA
AAACTCGAAAAGCCTCTCCTGTGTTTGTTTAAGCGTCTCCTTTGAGCGAG
GTCTTGCTGCCACCTATTGAAAGCCAGATGAGGACCGCCTTGAAGATGTG
ACACTGACACCCCCCAAGTTAGACCTGATGGATAGAGTACAAGAAAGTTG
GTCAGTTGGTGTTGCCTCTATTGGTAAACCGTAGGGCCATGCGTAGTGGG
CGGGGGTAGGGGGTGGGACGGGAAGCGGACACCTCCACTGTGGCCATGCC
GTTGGCCTGAAGCTGCGGCCGGCGCCCCCCTGACTGGTTTTGAAATGGGA
GCCCTCCTTCCCGTGCCGCCAGAGGTGTGGAGAGACGATCGAAACGCTGG
CTGAATTGCTGAGAGGGGATAACTACCAGGAAACGAGCCTAGCCAAACGA
CTGGTCGGGGTCTTGGAGCGGCTGTCCAGGCACCGGTCCGCGCGGGAGGC
CATCGCCTCCTCGAGCCTCATCGATTGGGCCGCAAAGGTGAAAAAAAACG
TGGCTGTACGAGCGAAGGATAACAACTTAACTAGTACGGCAGGCAACTGT
AGACAGTACGGCTAGCCAGGCGTCTATGATCGGCACCGAAAATAAATCCT
TTGTCTATTCCCGTTGGCGTTGTAGCGATTTCCGATGCGACTTTTTCTAC
TCTCATTCCCCGATGACCGCCTCCGTGTAGCCCTCTCTTTCTACCTCCCT
TTCCTGGGCCCTGCGTCTGTGCTGTACAGCGCCTGTCCAACAGCAGCTTC
TGCATATTGGCGCAGCAAGTAGCCTGATCGATCCCTTGTTTACCGATGCA
CTATTCGGTATTCCGTTTCCGCTCCGTGTACCTGCTTGCATCATCCATCC
CCAGATGCTAGAGTCGTGCTCCTCTCAAGGAGCCGGGGCTCGAGACCCCT
GTCCCCTGTTCGTGCTGCGCGTGACTGAGATCCTTGGGAACACTTCCGGG
AGCGTTTCGGGAAGGACCGCGGCGTTGGCGGCAAGTCCCGATTTGCTTAG
CTCCTTGGGGAACTTACTCGAGCACGACGACACCCAAGGTGATTCAGGAG
GGATTCGCGCGCCTAACACCCAAGTCCCGCAGCAGAAAATTCCGACAGAA
ACTCGCGACGTTTTTCATTGTTTGTTTCGGAGCTGGAGTCAGATCGATGT
TGACTTGTCTGCCCGGGGGTTGAGTCCGTGCGGTAAAAGGATCTTGAGCG
AGGTGACACGTTTCAGGATCTGTGTTCGACTACGTAGCGGAACTACAAGA
CCTTTCCCGGTATGCCTGCCTTGTAGGCAAACCTGCTCCAGTCTGAACTC
CGGCGAAGGGTACGAAACGAAGTGGATGCGATTCTCGCCGCTCCCCCTCC
GACCGCAGCTACCACCATTGTGGGTTATACCGTTGTTTCTTTCTTTAGGT
GTGTTCTTCGCTAATGACTTGAGACAGGAGAACGGCAAACAACTACCACC
TTCTCTTTCACCCGAACTGCTCTGCCCCGATATCCTTTAGCTTTTCTTCG
TCGGCAAACGTTCAACGTGTTTTTTCTTAGTGCGAACGAGCGCAGTCCGC
GGCCTCAAGCTGCTTCTAGGGGCCCGCGAGGCGAGGGAGAGAGCCCTTGG
AATGGGCATGGACGCTCTCTTGCAAAACCTCGGATCGTGCAAAGGGGGCG
AAAATAACGATTCCATAAAGGTGAAACGCGAACATCTTGTCAACACGATA
GGAGACGGAGGGGTTTTATGGGCGGTTTGAGAAAGGACAGTTGGATGTTT
CACAGTTAGATGTTTCACAGTTAGATGTTTCACAGTTGGAAGGCAGATCC
TGCCTGAAAGCCCTACGAAAGTGGCGGACAAAGATCAAGACTAACCCGTT
ACACAAGGTCGTCGCAACGTAAACAAGACCTAGAAACGGTATATCCATCC
ACACAGAGGTCACTGGTAAACAATTCTTCCCGTCCGTTTACCATCGGTTG
TAGCTAACGAGTAGACCCGAGTTTGCGAGACCTCGTTGCCACGCCGTTCT
AGAACTGAAACATGGTCAACCGCAAAACGCCTCCGTTCCCCTCATCTTTG
TGAACTCCCACGGAAGTCGCTGCTCGACCTGATGGTAGACACGATTGACC
CCGACGCGGAAGGAGGAGAAAACGCCCTTCACCAGTTTTCTGAGCCGGAC
GGTGAGGGTAGAGAGGGAAAAGGCCGAGCACCATACGTCCACGTCGAGAC
AATAATTTTAATATATGGTAGTCGGCAGGCGTTCCATGGCCAATTCGGCG
AGAGCAAAGGCATCAGATGCCCGCGGCACTTACTCGAGCTCTAGCACGTA
GATACCGTTGGGTTTCGACAGGCAGGGCAACTTCTCGACTGGCGGACGCG
TAATAACAATGACCCTTTGTTGAAGCAGGCGGAGGGCAAGAGGATGCGGG
GGACTCCGACTTCCTGTCCGACGAAGAGTCAGAAGAGGCCCCCCTCGTGT
CCTACTACGTACAGGTCACGGTAAGAGAGAGCAGACCTGCAGTGATGCGT
GACCAGCTACTTCACCGGCGGAGTCAAGTACGCGGAACAGACTTGAGTCG
ACCGGAGAACAAATTTCAAGATTTCATGAGCTGTGCGCACGCCAACCGAA
TCGTCGTTGACTACGCGTTCATAGACGCGTAGGTGTGATCGTTTATCCAA
TATTCTGAAACTTGAATTCCACGGGCGCCTACCACGAGGCGCAGGTCAAC
TCTGTGAGGAGAAACCATTGAGAGACCAAGGCCCTCACCGACACAAAATC
TAAATTCTGTTCGGTAGGAATCGGTGCTGCCTAGCTAGTTGGAGTAAAGA
AACGAGGGGTAACGAGGCCAGCGGCCGACACTTGCTTTTGAGACGCTCGT
GTGTTTGCGGCGGTGTGTGCGTGACTACACACAACACAACGAAGTAGCAC
ACGATGGCGAGTCCAGCGCGGCGTCCTCCAGCCTTTGTACTTTTGTGTGA
GAATTGTCGCTGACTAATTGCACTAAGTTCACCTCTGTGCTTCATCAGCG
TATGTATTGGGCCGTCGGTTAAGATGCTGCCATTCGCATAGATAGGAAAA
CACCGAGGAATAAACGCAATATTCGGCAGGTCTTCTCCGTCGGCTCACGC
TAGCTAGCTTGCCTCGTCATGTCGTCACCAGAATGCGCCTTGTGGAGAGA
ACCTCCTTCGGGAGCGCTACCGGCTCTCTACGGCGGAGGCGAAAGAGGAA
GCCATCGCCTGCTCTTCGGGCGGCGCGCCGTGGGGAGGGGAAGAGGAGGA
ACTCGTTTGCGGCGGGATTAGGACGAAACCTCCCGCATGGTGAAGAATTC
AAAATTCAACTCAGAAAAGCATCGTGTTACGAACATGCTGACAGGACCGG
CACCTAGCTTTTGAAGTGTTTTTTTTTTGTGGTTTCTTCGCATGTTTGCA
CGCCGACACGTGCATATCGACATAAAACGCGTGCTACCAGGTGCCCTGGT
GCCGGAGAATCGAAAGGGGTCGACAATGACATACCGAGAATACCGACGCC
CGAGGCGGGCACGGCGACGCTCATTCGCGGGGAGGAAAAGGTGAGTCCAT
GCAGCAAGCGCTTCGAGAATACCTTCCTCTTCTTGTAGAAGAAAATTGAT
ACTTTCCGAAGTGCATTCATGCATGCATGGTATCACTATACTACCGCCTT
TTTTCTCTCGTTTGGAACTTGTTGACACTGTGTGCACCATGCTTTTTTTC
TCTCCGGAGCTCATGAGCACATGTAATGAAGGATATCGTTGGTAGAGACC
AGAGTGACTCATAGATGAACACGTCTGGCCAACAACATTTACATGCAGGT
GTACGATAGGCGGCGGCCAGGTCTCCCCGACGAAATGCAGAGCAGGCCGA
GGATTCCCCGCACACCGGTGGGCTCTATCTCGGTCTCGGATCCTTTGGAG
GAGCGGCGGAGACAGGGTATTAGCGTGGCCGTCGTAGATGCCAAAGGGGG
GTGCTAGAAGCTCTGTATTCCCTTGCAGAACACACACGGGCACTACGCTT
CATCTCGATCTCGGATCCTTTGGGGGGGCGGAGACAGTAGCATGGCCGTC
GCAGAGGCCAAACGGGGTTGCTAGAAGCTCTTGTCTTCCCTCGCAGAACA
CACACACACGCTTGTCACACGTACGGTAGCAGGCGGTACGTTCCTATACG
TCTGTACGATGTCCCGCGGACGTGTAGACTATATACTAGTCTTATGCATG
CATGGTAGAGTATAAAATAGGTACTACTGTAGTCTACCCGAATACAAAAC
AAAAACAAACACGAACTTCGGGTTGAGGCTTGGACTAATACAGTAGTCTA
GGCTAAAGAGTCGCTCGCCACCACCGGCGTCGGGCTTTAGACTAGGCTAT
GCTGTTACGGTTTGGAGTTTGGAGTGTTCAGTGCCCGACCCACATCGATA
TCACCGTTTGTTTGGGTGGCGGGGCGCGTTTTGTACGTCACACGTCACGT
CAGAGATCTTCGTCGAGCGCGGTCTCCAAGTTTCCTTTAGTAGACTCGTC
CACCGTGGTTGGTTTGAGGTCCGCGGCGGATGTAAACGGCTTGGTCTTTG
TACATCGGAATACTATGGTATGCATATGAATAATAAATAAATAGGCCGTT
TACATGCGTTCGTGCCTATCGCGGTCCTACTATCCATTGATGATGTTCCC
CGTGCGTTGATCTGTGGGGTGCTTCATGCTTTTGGCCTGATGATGGTGAA
ATCCAAGCAGCAACGGTTAGAAGATCTGTCAGGATCCAAATGATAAGTAG
TTTTCGATCAATCGAGTCGATCGAAAGGGAACACTTAATA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8447:646..6685- >mRNA_E_fasciculatus_S2_contig8447.16579.1 ID=mRNA_E_fasciculatus_S2_contig8447.16579.1|Name=mRNA_E_fasciculatus_S2_contig8447.16579.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1368bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8447:646..6685- (Ectocarpus fasciculatus EfasUO2)
ATGAGCGAATCGGCTCAGGAGCGGGAAGAGGCAGGAAACACGGAAGGCAA
GCATTGGGGGGTGTCGTCGGCAGCAAAGGAAGAAAATCCGAGGTGGGAAG
AGTTTGGTGGGGACCCCGGTCGGCTGGTGTCCGACTACACGGTCAGGTTG
CTGAGGGCGCTCGTCTCCATGAGCAAAGCTCGCTCCTATATATTGGGCGA
GAGGTGTGGAGAGACGATCGAAACGCTGGCTGAATTGCTGAGAGGGGATA
ACTACCAGGAAACGAGCCTAGCCAAACGACTGGTCGGGGTCTTGGAGCGG
CTGTCCAGGCACCGGTCCGCGCGGGAGGCCATCGCCTCCTCGAGCCTCAT
CGATTGGGCCGCAAAGATGCTAGAGTCGTGCTCCTCTCAAGGAGCCGGGG
CTCGAGACCCCTGTCCCCTGTTCGTGCTGCGCGTGACTGAGATCCTTGGG
AACACTTCCGGGAGCGTTTCGGGAAGGACCGCGGCGTTGGCGGCAAGTCC
CGATTTGCTTAGCTCCTTGGGGAACTTACTCGAGCACGACGACACCCAAG
TGCGAACGAGCGCAGTCCGCGGCCTCAAGCTGCTTCTAGGGGCCCGCGAG
GCGAGGGAGAGAGCCCTTGGAATGGGCATGGACGCTCTCTTGCAAAACCT
CGGATCGTGCAAAGGGGGCGAAAATAACGATTCCATAAAGTCGCTGCTCG
ACCTGATGGTAGACACGATTGACCCCGACGCGGAAGGAGGAGAAAACGCC
CTTCACCAGTTTTCTGAGCCGGACGCAGGCGGAGGGCAAGAGGATGCGGG
GGACTCCGACTTCCTGTCCGACGAAGAGTCAGAAGAGGCCCCCCTCGTGT
CCTACTACGTACAGGTCACGAATGCGCCTTGTGGAGAGAACCTCCTTCGG
GAGCGCTACCGGCTCTCTACGGCGGAGGCGAAAGAGGAAGCCATCGCCTG
CTCTTCGGGCGGCGCGCCGTGGGGAGGGGAAGAGGAGGAACTCGTTTGCG
GCGGGATTAGGACGAAACCTCCCGCATGGTGCCCTGGTGCCGGAGAATCG
AAAGGGGTCGACAATGACATACCGAGAATACCGACGCCCGAGGCGGGCAC
GGCGACGCTCATTCGCGGGGAGGAAAAGGTGTACGATAGGCGGCGGCCAG
GTCTCCCCGACGAAATGCAGAGCAGGCCGAGGATTCCCCGCACACCGGTG
GGCTCTATCTCGGTCTCGGATCCTTTGGACACTACGCTTCATCTCGATCT
CGGATCCTTTGGGGGGGCGGAGACAGTAGCATGGCCGTCGCAGAGGCCAA
ACGGGGTTGCTAGAAGCTCTTGTCTTCCCTCGCAGAACACACACACACGC
TTGTCACACGTACGGTAG back to top
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