mRNA_E_fasciculatus_S2_contig8438.16570.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8438.16570.1
Unique NamemRNA_E_fasciculatus_S2_contig8438.16570.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX10_9PHAE)

HSP 1 Score: 682 bits (1760), Expect = 1.170e-234
Identity = 464/649 (71.49%), Postives = 488/649 (75.19%), Query Frame = 1 
Query:    1 VSQIVLGIGEAFNAPACYAMITLYFPHSNRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSTDGYTKLPDDDDVDDPSGEASSLLPPSP--SHEKCTKLEPLPPPAAAMVAGVGGPRKVVSFADSNGXXXXXXXXRASYGGCVGGETRAADLSATNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLASAXXXXXXXXXXX-DIAPARWPXXXXXXXXFLTMGEPPVQAAGGGGRGTATRADVSGRNPFATSGNPFAVSPAAAEGQGR---AGRWVDGDGAAGGEEGRXXXXXXXXXXXXXXXKRGRGGADRDPSIAAGGAGAGEAPYSAALVAVGAGFKDPNNGSGWGWYDEEDHXXXXXXXXXXXXXXXXXXWKDVADSXXXXXXXXXXXXXXXXX------------EGLRKHDLGQALRMIVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGFVSVGGMASSYGGGVLSDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFSKDFYVSVTALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNVGTWFIGKMDSGLATVRKPFFAVVSNSQPT 1893
            VSQIVLG+G+AFNAPACYAMITLYFPHS RATANGIYS+GTYLGSA+SSLCLALAVLLGWRNTAFLAGA GVLA AVLFFTVEHNPVMPPS DGYTKLPD                     SHEKCTKLEPLPP AA  ++GVG  RKVVSFA+SN         R  Y      ETRA+D + +NGD      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXX         DIAPARW             GEPP+QAA GG R   TRADVSGRNPFA SGNPFAVSP+AA+GQGR   AGRWVDGDGAAG EE R                     ADRD  IAAGGAGA +APYSAALV      KD NNG GWGWYDEEDH XXXXX X          WKDVADSXXXXXXXXXXXXXXXX               L KHDLGQALRMIVSNRVVLVLFAASS RMI TWASAGYMAVYYHR+YPSQ++LYS++NAGFVSVGGMASSYGGG +SDRLRVRNEGVLGYIPALGSLAAIGPMAVVLF+KDFYVSV ALF+SYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICN+GTWFIGKMDSGLATVRKPFFAV+  S  T
Sbjct:   72 VSQIVLGMGQAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAISSLCLALAVLLGWRNTAFLAGASGVLAAAVLFFTVEHNPVMPPSEDGYTKLPDXXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAA--MSGVGH-RKVVSFAESNDNGGCAGGARPPYXXXXXXETRASDPAVSNGDDRQDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGSSGSGGDIAPARW----------TAPGEPPIQAASGGKR--TTRADVSGRNPFAKSGNPFAVSPSAADGQGRGGGAGRWVDGDGAAGCEEDRGARGGRGRENRSGRGXXXXXXADRDQPIAAGGAGASDAPYSAALVXXXXXXKDLNNGKGWGWYDEEDHAXXXXXGXAATPAGGAGRWKDVADSXXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXLGKHDLGQALRMIVSNRVVLVLFAASSVRMIGTWASAGYMAVYYHRQYPSQVALYSIINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFLSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVT 705
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BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS6_ECTSI)

HSP 1 Score: 674 bits (1739), Expect = 9.900e-233
Identity = 463/648 (71.45%), Postives = 479/648 (73.92%), Query Frame = 1 
Query:    1 VSQIVLGIGEAFNAPACYAMITLYFPHSNRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSTDGYTKLPDDDDVDDPSGEASSLLPPSP-SHEKCTKLEPLPPPAAAMVAGVGGPRKVVSFADSNGXXXXXXXXRASYGGCVGGETRAADLSATNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLASAXXXXXXXXXXXDIAPARWPXXXXXXXX----FLTMGEPPVQAAGGGGRGTATRADVSGRNPFATSGNPFAVSPAAAEGQGR---AGRWVDGDGAAGGEEGRXXXXXXXXXXXXXXXKRGRGGADR-------------DPSIAAGGAGAGEAPYSAALVAVGAGFKDPNNGSGWGWYDEEDHXXXXXXXXXXXXXXXXXX--WKDVADSXXXXXXXXXXXXXXXXXEGLRKHDLGQALRMIVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGFVSVGGMASSYGGGVLSDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFSKDFYVSVTALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNVGTWFIGKMDSGLATVRKPFFAVV 1875
            VSQIVLG+GEAFNAPACYAMITLYFPHS RATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPS DGYTKLPD                    SHEKCTKLEPLPP AA  +AGVG  RKVVSFADSNG        RA YGGCVGGETR AD + +NGD               XXXXXXXXXXXXXXXXXXXXXXXX  G               DIAPARW     XXX     FL   EPP+QAAGGG R   TRADVSGRNPFA SGNPFAVSP+AAEGQGR   AGRWVD DGAAG EE R                  RGG  R             D  IAAGGAGA +APYSAALV                 YDE   XXXXXXXXXXXXX       WKDV DS     XXXXXXXXXXXX  L KHDLG+ALRMIVSNRVVLVLFAASSARMI TWASAGYMAVYYHR+YPSQ++LYSV+NAGFVSVGGMASSYGGGV+SDRLRVRNEGVLGYIPALGSLAAIGPMAVVLF+KDFYVSV ALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICN+GTWFIGKMDSGLATVRKPFFAV+
Sbjct:   94 VSQIVLGMGEAFNAPACYAMITLYFPHSKRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAA--MAGVGH-RKVVSFADSNGNGGGAGGARALYGGCVGGETRTADPAVSNGDDRQELAAAEAGRRESXXXXXXXXXXXXXXXXXXXXXXXXSRG-----GTVGSSGSGGDIAPARWAAPGAXXXAPPARFLAPLEPPIQAAGGGRR--TTRADVSGRNPFAKSGNPFAVSPSAAEGQGRGCGAGRWVDDDGAAGCEEDRGT----------------RGGRGRRXXXXXXXXXXXXDQPIAAGGAGASDAPYSAALVXXXXXXXXXXXXXXXXXYDEXXXXXXXXXXXXXXXXPAGGAGRWKDVEDSGPRRGXXXXXXXXXXXXX-LGKHDLGEALRMIVSNRVVLVLFAASSARMIGTWASAGYMAVYYHRQYPSQVALYSVINAGFVSVGGMASSYGGGVISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVL 714
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BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Major (facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.140e-41
Identity = 87/184 (47.28%), Postives = 115/184 (62.50%), Query Frame = 1 
Query: 1333 GQALRMIVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGFVSVGGMASSYGGGVLSDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFSKDFYVSVTALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNVGTWFIGKMDSGLATVRKPFFAVVSNS 1884
            G+ LR + +   VL+L  ASS RMI TW  A Y+  Y+HR YP+  S YSV+N   V+ GG+ SS  GG L+DR   R+ G   ++PALG+   + P  V LF  +FYVS+ AL    L+ ECWLGPGMA LQ E+P+++ G SVA+LLF N+V  NVG W I  +D G   VR P F  ++ S
Sbjct:  282 GRVLRTLCTTPRVLLLLLASSLRMIGTWVGAAYLPTYFHRAYPAYESQYSVINGVIVAAGGVLSSSVGGALADRWGKRSPGGYAWVPALGAALGLMPAGVALFCGNFYVSMAALGAQNLLAECWLGPGMAILQREVPRDMVGVSVAVLLFCNTVTANVGPWIISAIDPGTDAVRDPIFCQLALS 465
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BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1I5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.190e-25
Identity = 58/156 (37.18%), Postives = 99/156 (63.46%), Query Frame = 1 
Query: 1342 LRMIVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGFVSVGGMASSYGGGVLSDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFSKDFYVSVTALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNVG 1809
            L +++ ++++L+L AA+  RM+AT++ A ++ ++Y RE+P +I  +S LNA    + G+ SSY GGVL+D+    + G L ++PA+G+  +     + L+S  F  S+  + ++ L  ECWLGPGM  LQ +LP    G +V+ L+F N+V  +VG
Sbjct:  151 LGLMLQDKIILMLIAATCLRMMATYSHAAFVPIFYRREFPHEIYWFSELNAWGTCITGLLSSYYGGVLADKYAALDPGYLAWVPAIGAAISAPLNFLALYSTSFNASLGFMLLATLFSECWLGPGMTILQRQLPSGCQGVAVSFLIFANTVFASVG 306
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Major (facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W4_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.090e-21
Identity = 70/219 (31.96%), Postives = 102/219 (46.58%), Query Frame = 1 
Query: 1336 QALRMIVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGFVSVGGMASSYGGGVLSDRLRVRNEGVLGYI----PALGSLAAIGPMAVVLFSKDFYVSVTALFVSY--------------------------------LVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNVGTWFIGKMDSGLATVRKPFFAVVSNS 1884
            +AL  +++N  V++L  A+S RMI TW  A Y   Y+ R +P++   YS +N   V+ GG+ASS+                        PA+G+ A + P    L+  +FY ++  L +                                  L+ ECWLGPGMA LQ E+P+++ G SVA+LLF NS+  NVG W I   D G A VR   F  ++ S
Sbjct:  284 RALLALLANPRVVLLLVATSLRMIGTWVVASYFPDYFLRAFPAREGAYSAINGAIVAAGGVASSFAXXXXXXXXXXXXXXXXXXXXXXXPAIGAAAGLVPTFFALYLGNFYAAMAVLALEVRAARCCRRRCRAACASAGRSPRSLLLQKANHNLIAECWLGPGMAILQREVPRDMVGFSVAVLLFCNSLASNVGPWIIAAADPGTADVRHSIFLTMALS 502
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Major (facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX0_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.420e-19
Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 1 
Query: 1321 KHDLGQALRMIVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGFVSVGGMASSYGGGVLSDRLRVRNEG-VLGYIPALGSLAAIGPMAVVLFSKDFYVSVTALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNVGTWFIG 1824
            K  L QALR ++S R+VL + AA+  R +A +    +M V+Y   +P    +YS LNA  +++GG  S+Y GG  +DR     +      IP  G+ AA+  +A  L++  F +S+ ALF  YL  E W GP ++ LQ  LP    GT + +      +  +   W +G
Sbjct:  229 KLTLPQALRAVLSRRLVLAIIAAAMVRYMAGYTIGTFMPVFYGARFPDDADVYSYLNASIIAIGGAVSAYVGGRTADRWAAAGQRRAYLLIPGAGAAAAVPLLAAALYAPSFGLSMAALFAEYLCAEVWSGPAVSALQGALPPGARGTGMGVFALGTGLAGSAAAWAVG 397
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BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX01_HETAK)

HSP 1 Score: 96.7 bits (239), Expect = 3.210e-17
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 1 
Query:    4 SQIVLGIGEAFNAPACYAMITLYFPHSNRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSTDGYTKLP 297
            +++V+G  +AFNAP CY  +  YF    RATANG+YS G +LG+A+ SL +ALA  +GWR+T  LAG  GVL  AV+F T    P  P    G    P
Sbjct:  157 ARLVVGAAQAFNAPCCYIFVAQYFEERRRATANGVYSAGNFLGAALGSLSIALASAVGWRDTCALAGTVGVLVAAVVFLTARDRPAGPARPPGAPPPP 254
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C848_9EUGL)

HSP 1 Score: 87.4 bits (215), Expect = 1.150e-15
Identity = 47/133 (35.34%), Postives = 82/133 (61.65%), Query Frame = 1 
Query: 1351 IVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGFVSVGGMASSYGGGVLSDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFSKDFYVSVTALFVSYLVGECWLGPGMACLQMELPKE 1749
            ++S++   V+F A++ R  A ++   + A +   ++P  ++ +S +NAG +SVGG+ASS  GG+L+DR+      +  ++PA+GSL AI   A+ +    F V++  LF+ YLV ECW GP +A L   +P++
Sbjct:  109 VLSSKAARVIFLATAFRFCAGFSIGTWKAPFMVEKFPEFVNSFSAINAGVISVGGLASSLLGGLLADRVFTGRRKL--WVPAIGSLLAIPTFALFVTQDSFGVALFCLFLEYLVAECWFGPTLAALYDVVPQD 239
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPU8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.470e-15
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:    1 VSQIVLGIGEAFNAPACYAMITLYFPHS--NRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNP 258
            +S+I+LGI + FNAP  Y +I  +F H+  +RA ANG+YS GTYLGSA+SSL L L ++ GWR  A +A  FGV   A+++  V+  P
Sbjct:  161 ISRIILGIAQGFNAPCAYPVIAYFFSHNGDHRALANGVYSIGTYLGSALSSLSLVLTMIFGWRTIATIAAIFGVFCAALIYLFVDRPP 248
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAA8_AURAN)

HSP 1 Score: 87.0 bits (214), Expect = 5.150e-14
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 1 
Query:    7 QIVLGIGEAFNAPACYAMITLYFPHSNRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSTDG 282
            ++++G+ + FNAP  Y +I  +F  + RATANG+YS GTY GSA+S+L L  A+ +GWR T   A   G+ A A+L+ TV+  P    +TDG
Sbjct:  162 RLIMGVAQGFNAPCSYPVIAYHFSMAERATANGMYSMGTYFGSALSTLSLIFAMWVGWRMTTTAAVVVGIFAAALLYLTVDRPPQRYGATDG 253
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8438.16570.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
MFS1.170e-23471.49domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized9.900e-23371.45protein (Fragment) n=1 Tax=Ectocarpus siliculosus ... [more]
Major3.140e-4147.28facilitator superfamily domain-containing protein ... [more]
Hypothetical1.190e-2537.18protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Major1.090e-2131.96facilitator superfamily domain-containing protein ... [more]
Major4.420e-1933.73facilitator superfamily domain-containing protein ... [more]
Hypothetical3.210e-1746.94protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical1.150e-1535.34protein (Fragment) n=1 Tax=Eutreptiella gymnastica... [more]
Hypothetical2.470e-1548.86protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
MFS5.150e-1444.57domain-containing protein n=1 Tax=Aureococcus anop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8438contigE_fasciculatus_S2_contig8438:709..6401 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score679.5
Seed ortholog evalue1.5e-192
Seed eggNOG ortholog2880.D8LLS6
Model size1920
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Major Facilitator Superfamily
EggNOG OGs2CZE1@1,2S9X8@2759
Ec32 ortholog descriptionMajor facilitator superfamily domain
Ec32 orthologEc-02_002700.1
Cds size1920
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842503.0296586-CDS-E_fasciculatus_S2_contig8438:708..8971696842503.0296586-CDS-E_fasciculatus_S2_contig8438:708..897Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8438 709..897 -
1696842503.044348-CDS-E_fasciculatus_S2_contig8438:3282..35761696842503.044348-CDS-E_fasciculatus_S2_contig8438:3282..3576Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8438 3283..3576 -
1696842503.0540736-CDS-E_fasciculatus_S2_contig8438:4446..57081696842503.0540736-CDS-E_fasciculatus_S2_contig8438:4446..5708Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8438 4447..5708 -
1696842503.0631957-CDS-E_fasciculatus_S2_contig8438:6226..64011696842503.0631957-CDS-E_fasciculatus_S2_contig8438:6226..6401Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8438 6227..6401 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8438.16570.1prot_E_fasciculatus_S2_contig8438.16570.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8438 709..6401 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8438.16570.1

>prot_E_fasciculatus_S2_contig8438.16570.1 ID=prot_E_fasciculatus_S2_contig8438.16570.1|Name=mRNA_E_fasciculatus_S2_contig8438.16570.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=640bp
VSQIVLGIGEAFNAPACYAMITLYFPHSNRATANGIYSTGTYLGSAMSSL
CLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSTDGYTKLPD
DDDVDDPSGEASSLLPPSPSHEKCTKLEPLPPPAAAMVAGVGGPRKVVSF
ADSNGNGGGAGGARASYGGCVGGETRAADLSATNGDDRQELAAAAAAGRR
GSWSSASSTSSTSSYEYAGGGAGGGGGGLASAGGAPGSSGSGGDIAPARW
PGGEAPPARFLTMGEPPVQAAGGGGRGTATRADVSGRNPFATSGNPFAVS
PAAAEGQGRAGRWVDGDGAAGGEEGRGARGGGGRRNGGGRRKRGRGGADR
DPSIAAGGAGAGEAPYSAALVAVGAGFKDPNNGSGWGWYDEEDHNAAAAD
GAAATPAGGGGRWKDVADSGPRRGGGGGGGGGGGGGEGLRKHDLGQALRM
IVSNRVVLVLFAASSARMIATWASAGYMAVYYHREYPSQISLYSVLNAGF
VSVGGMASSYGGGVLSDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFSKD
FYVSVTALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVIC
NVGTWFIGKMDSGLATVRKPFFAVVSNSQPTVTVVTTPLG
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mRNA from alignment at E_fasciculatus_S2_contig8438:709..6401-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8438.16570.1 ID=mRNA_E_fasciculatus_S2_contig8438.16570.1|Name=mRNA_E_fasciculatus_S2_contig8438.16570.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5693bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8438:709..6401- (Ectocarpus fasciculatus EfasUO2)
GTGTCGCAAATCGTCCTCGGGATCGGGGAGGCCTTCAACGCTCCCGCGTG
CTACGCGATGATCACGCTCTACTTCCCCCACTCCAATAGAGCCACGGCGA
ACGGCATCTACTCCACGGGCACCTACCTGGGCTCCGCTATGTCGAGCCTC
TGTCTCGCCCTCGCGGTCCTGCTCGGTGAGTGTATAGTGTATGGGGCTAG
TACCGTTGTGTAGTTGTGGGTGGTCGGTGGGTGGTTGGGTGGGTGTTCTC
TCGTGTGGTCGCTGCCGGTTCTTGTTCTTGTGTTGTGGCGTTTAGTTCGA
ACGGTACGACTTCCCTTGGCGTTGGCGGAATTTTTCGTGGTTTTCGGTGC
ACTGTTTGTGTGTCACTGATGAGCAGGAGAGCAGTCAAAAGGGCCCACCG
GATTTCTTGTCCAGCATGGGTCTGGGGGCCGTTGCGGGGTACATACCTTT
TTCTTGTATGCGTAGGCGAGAAAGTGGCAAAAACGTAGGAATACCGGAAC
CGGTCTGTTCGGTCGGAGCTGTTCTCCCAAACCACATTCTGCTGTGTACA
GCAGTGTGATTTCGGAGTTGATGAACACCCGCCCAAGACCCCAAGCCCGA
TATGTATTCCCGCTCGCTGCTTTCCGTCGCCCTCATGAACTCCACCAACC
CTCTCGCCCCAAAAACCAACCCCGCAAACCCGTCGTCAACCAGGGTGGCG
AAACACGGCGTTCTTGGCTGGGGCTTTCGGGGTCCTCGCCGGGGCCGTGC
TCTTCTTCACGGTGGAGCACAACCCGGTCATGCCGCCCTCCACCGACGGC
TACACCAAGCTGCCGGACGACGACGACGTGGACGACCCAAGCGGGGAAGC
ATCATCGCTCCTGCCGCCGTCGCCGTCGCATGAGAAATGCACGAAGCTTG
AGCCGCTGCCGCCTCCGGCGGCGGCGATGGTGGCCGGGGTCGGCGGCCCT
CGTAAGGTCGTTAGCTTCGCCGATAGCAACGGCAACGGAGGAGGTGCCGG
CGGCGCGCGCGCCTCGTACGGGGGCTGCGTGGGCGGGGAGACTAGGGCGG
CCGACCTCTCCGCCACCAACGGCGATGATCGGCAGGAGCTAGCGGCGGCG
GCAGCGGCTGGACGGAGAGGGTCATGGTCGTCGGCGTCGTCAACTTCGTC
CACGTCGTCCTACGAGTACGCCGGCGGCGGTGCCGGGGGCGGCGGCGGCG
GCCTGGCCTCCGCGGGCGGAGCGCCGGGCTCGAGCGGCAGCGGCGGCGAC
ATCGCGCCGGCGAGATGGCCGGGAGGAGAGGCCCCGCCGGCGCGATTCCT
GACGATGGGTGAGCCGCCCGTTCAAGCGGCAGGCGGAGGAGGGAGGGGGA
CGGCGACAAGGGCCGATGTTTCCGGTCGAAATCCTTTCGCAACGAGCGGC
AACCCGTTCGCGGTGAGTCCCGCCGCTGCGGAGGGACAAGGGAGAGCGGG
CCGATGGGTAGACGGTGACGGTGCCGCCGGGGGCGAGGAAGGCCGGGGAG
CACGAGGGGGGGGAGGGAGGAGGAACGGCGGCGGTAGGAGGAAGAGGGGG
AGGGGGGGGGCTGATAGAGACCCATCCATCGCGGCCGGCGGCGCTGGCGC
TGGCGAGGCGCCGTACTCTGCCGCGCTCGTAGCGGTAGGCGCGGGCTTCA
AGGACCCCAACAACGGCAGCGGGTGGGGGTGGTACGACGAAGAGGACCAC
AATGCTGCTGCTGCTGATGGCGCGGCGGCTACCCCCGCAGGGGGGGGAGG
CAGATGGAAGGATGTCGCGGACAGCGGGCCTCGGAGGGGAGGAGGAGGAG
GAGGGGGAGGAGGAGGAGGGGGAGGGGAGGGTCTGAGAAAGCACGATCTA
GGCCAGGCGTTGAGGATGATCGTGTCGAACCGCGTGGTGCTGGTGCTTTT
CGCGGCGTCCTCGGCTAGGATGATTGCTACCTGGGCCTCGGCCGGGTACA
TGGCGGTGAGTTGTCGCTGCTGCTGCTGCTGCTGCTGCTCCACGAGTCCA
AGGCCCGTGCTGACTGACCTCTCTGCAGTGCCGCTTAGTCTGTCTTGAAG
TTTTAGTAGGGGTGAGAGGCCGGTTCCTGTTTTTTTTTGTTGGGTGTGGC
AGGTTACGGCGGCAAGAGAAAGAAAAATGCTCACGTACACGCGCACAACT
TCCGAAAGATTCCCATGACTTTGGCGCAAGGGTGCTCCTCTGCACTACTA
TGCCTCTGCGCTTTGCGGCACTTTCCTAGAACCGACGGCACAAACTACGG
CGGCACGGGCGGACAGCAGTTGCGGTGTCCTCAACAAGTGCATGCGCAGC
AGCTGCACTCCCATCATTGGCGAGGCGGCCAAAAAATCGAACCGCCGTTT
TCGGATGCATGAACAAATATCAAGTTCTGTTATAACACGCGGTCCTGTTG
TTGTACACCGGTCAAGTGCTGGACACGACCGACCGCCCTCAGGGTGGCGA
GGGGCAACGATGTCGGGGTTGTCGTTCATTGTCTCGGGTGCTCGTGGTCG
GTCTCCTCTGTAGAAAATGGCCTCTGCTCGATGCGGGAACGAGCATGTCA
CCATGAAGTGGAGCACTTCACACACAAACACCTTCCTTCGCGAGGATACA
CTAGTAAGATTAAGATTGGTTTTGGTAGGGGTTTTCGGTGCGGACTGGGG
TGGTAGGGATAGGGGTACGAACCCCCCCACCCTCTATGCATCATTAATAG
ATAGCAATATGACATCAACAAAAAAAATGCTCGCTAAGGCGGTCCGCCCC
AATCCTAATCCTAGCCCCAACCCTAGTAACCTAACCCTGCACCCTGTTAA
CCCTCAAATAACCCTGTCCCTTTAGGTGTACTACCACCGGGAGTACCCCT
CCCAGATCTCCCTCTACAGCGTCCTCAACGCGGGCTTCGTGAGCGTCGGG
GGCATGGCCTCCTCCTACGGGGGCGGCGTGCTCTCGGACCGCCTGCGCGT
GCGGAACGAGGGGGTGCTCGGCTACATCCCGGCGTTGGGGTCCCTTGCGG
CCATCGGGCCCATGGCCGTCGTGCTCTTCTCCAAGGACTTCTACGTGTCT
GTCACGGCCCTGTTCGTGAGCTACCTGGTCGGGGAGTGCTGGCTGGGGCC
TGGGATGGCTTGCTTGCAGGTATGTATATGCATATGTAGTAGGAAAAATC
GGAGGGGGGATGATTGTACTCATGTTTGGGTGGCATGCCTTAGATGTTAA
GGCCATTGACCTCTCGCACCCCGGGACGGAGCGATACGCCGGATTTTCGC
CGGCCCAGGCTTGCGTTTTCACCAGAATGAATGAATGAAGCTGATGGTTG
CACCGTACTGCTTGCTGTGCACAAGGCTTTCAGGTACCACGTAATAGTGG
GGCGACAATAGCAACATTCACCTTTGGGTGACCCCGTCCCGCCCCTCCAA
GAGGGCTCGCGGATTCAGTTTTTGGAAGAACTGCTACCCCCCACCCCCAA
CCCCCTATTTCTTCGGGCGCTTAATCCAATTTGTTCGGTTTCGTTGTTTC
ATTGACTTTGAGAGTGGCAATACTTGAAACAAAAACGTCAGAGTGAGCAG
CCAGCGCGGGATCGCCCAAGCTTGTTATGGTCTCTCTCTCTTTCGACTTG
TTTTGGGGCTTGATTGTCTTGCAACGCCAAGGCACACCCACCCGTGGAGG
AGGATGTGAAAGTCGGACAGCAATGAGCTGGTTGGCGAGCACCCGCCCCG
CCCTGCCCCGCCCAAAAAAAAAACGTGCGCGGGTATTTTTGTGGCTAGGT
TGTGCGTTTGTTCTGCATGGAGCATTTGCTACGCGCTTTCAAAGATGAGG
AAATGTTCTCTAGGAAGAAAGACATTCGCTGTGTGGTACATGAGGTATGT
ATGTGTAAGACTAGCTCATTTTCAGCTACATACAGTAGTAGATGGTGCGA
AAATAGTTGTTGTATAGGCTTAGATAGGCAGGCTTGAATACGTCCAGCAT
CCAGCAGGTTGTTTAAACACTCACTCTGTAAGACTCCAGCACTCGTTTCA
AATGGGGGCATTATCTCGGACGGGCTTCCGTGTACATCGAGCAATGCGGA
CCCCAGCCAATATAAAAGGTTCAATTGTTCAGGCACGGCAGTAAAACCGA
GCAGTGTTTCGTCTCTGCTTGTAGGGGGAGGAATAGATCCGCCCTTGCAG
TCAGTGGTGTTGAGAAACTCAGCTCAGCCGAGGATTCAACACTGTTGTCA
ATACAAGTATTGATATATGCCTACAGTCTATGGTGTACCACATGGTATAC
TGCACGTGCGGAAATTGAGCCTTGACCTTGCTCAACCCGAAAAGCAATAC
GATTACAATGTAGTCTACGCAATACGTGTGTGTGAAAGACTGCTGTAGTT
TAGTAACTTCGAAGATAGACCCGACGATTGTATAGTTGCAAGTACGAGCA
AATTGAGCAATATAGCAATCGGTCGTCGAAAAGCCCTGACATCCTTCGGT
CTCATTGTATCGTCTCGAAAATATTGTTGTGCCTGAACTCAGAGTTTTTC
AGGCGATGAGGGCACCCTTATAACCTTGTTTGGCTGCCAGGGGACGGGGG
AGCAGCAGGCTGGCCATCATGAGTCTGTATCCAGCCACGGATTCCGCATA
CAACTGCAACAAAACAGCAGCGGGCCCCAGGTTGAGGGAGTGCAAAAACT
ATTATATAGGGAAAAATCGCTTGTGCCTGCTGCCTCATCGGTGGTGCTTG
GGGTTGCGCCTGCGGGCGCACAACTTGGGCACCGCTGCGACTAGCACGGC
TGAAATCTGAAATCGTCGATGTGCATGAGCAATACAGTAGTCCGGCACCG
CTGCGAGTACCACGACAAATGATACTGATGTGAAGGAGCAATAAAATTAC
TATGATTTTCTCTTGCTCCTTGACACCGATGTCATTTGCCGTATGCATAG
TATTAATAGTCGCAGCGGTGCCGAATTATTGCTCCTTCTCTCTTGTTTTT
TTTCAGCCGTGTTAGTCGCAGCGGTGCCGGACTACTGTATTGCTCATGCA
CATGGAGGATTTCAGCCGCGCTAGTTGCAGCGGTGCCGAAAGTAGTCTGC
CCGCAGGCGCAACCCGAAGCGCCACCAATCAGTGAGCTTGCAAGCCGTGA
CAGGTCATGCTCTTTCGCCAACCTTGTCCGCCCAGTACTCCTCCGCCCAG
CAGATAGATTCAATATTCCGAAACACGATCTTCCTGCGCATCATGCCATG
TTCCGAATCCGCCGATACCGATGATGGGGTGCTCTCCGGGCTAGGCGTGG
GAGAGAGGGTCAGAGTAGTGCGCTTGCGGGAGGGCAGACCTGTGCTAGAT
GGGCATGGCTGCTATGCAGCCGTCGTTCAATGGCGCAGACAAGGGCGGAG
CTGGGAGAGCTCAGTGTGTGTGGGGGGGGGTATGTATATTATGAAGTAAC
GCCTGATCTGGTTCTTAGTCCAGTCTACAGCAGTGCTGCAAAAACTTGAA
TCCGCGAGCCCTCTTAGCCCTTCCTCTCATACTGCTGTTGTTGCGACGAA
ACAGATGGAGTTGCCCAAGGAACTCGCGGGCACCAGCGTGGCCATCCTGC
TCTTCCTGAACTCCGTCATCTGCAACGTCGGCACGTGGTTCATCGGGAAG
ATGGACAGCGGCCTGGCGACGGTTAGGAAGCCTTTCTTCGCAGTGGTAAG
CAACAGCCAGCCAACAGTAACAGTAGTAACCACACCTCTGGGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8438:709..6401-

>mRNA_E_fasciculatus_S2_contig8438.16570.1 ID=mRNA_E_fasciculatus_S2_contig8438.16570.1|Name=mRNA_E_fasciculatus_S2_contig8438.16570.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1920bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8438:709..6401- (Ectocarpus fasciculatus EfasUO2)
GTGTCGCAAATCGTCCTCGGGATCGGGGAGGCCTTCAACGCTCCCGCGTG
CTACGCGATGATCACGCTCTACTTCCCCCACTCCAATAGAGCCACGGCGA
ACGGCATCTACTCCACGGGCACCTACCTGGGCTCCGCTATGTCGAGCCTC
TGTCTCGCCCTCGCGGTCCTGCTCGGGTGGCGAAACACGGCGTTCTTGGC
TGGGGCTTTCGGGGTCCTCGCCGGGGCCGTGCTCTTCTTCACGGTGGAGC
ACAACCCGGTCATGCCGCCCTCCACCGACGGCTACACCAAGCTGCCGGAC
GACGACGACGTGGACGACCCAAGCGGGGAAGCATCATCGCTCCTGCCGCC
GTCGCCGTCGCATGAGAAATGCACGAAGCTTGAGCCGCTGCCGCCTCCGG
CGGCGGCGATGGTGGCCGGGGTCGGCGGCCCTCGTAAGGTCGTTAGCTTC
GCCGATAGCAACGGCAACGGAGGAGGTGCCGGCGGCGCGCGCGCCTCGTA
CGGGGGCTGCGTGGGCGGGGAGACTAGGGCGGCCGACCTCTCCGCCACCA
ACGGCGATGATCGGCAGGAGCTAGCGGCGGCGGCAGCGGCTGGACGGAGA
GGGTCATGGTCGTCGGCGTCGTCAACTTCGTCCACGTCGTCCTACGAGTA
CGCCGGCGGCGGTGCCGGGGGCGGCGGCGGCGGCCTGGCCTCCGCGGGCG
GAGCGCCGGGCTCGAGCGGCAGCGGCGGCGACATCGCGCCGGCGAGATGG
CCGGGAGGAGAGGCCCCGCCGGCGCGATTCCTGACGATGGGTGAGCCGCC
CGTTCAAGCGGCAGGCGGAGGAGGGAGGGGGACGGCGACAAGGGCCGATG
TTTCCGGTCGAAATCCTTTCGCAACGAGCGGCAACCCGTTCGCGGTGAGT
CCCGCCGCTGCGGAGGGACAAGGGAGAGCGGGCCGATGGGTAGACGGTGA
CGGTGCCGCCGGGGGCGAGGAAGGCCGGGGAGCACGAGGGGGGGGAGGGA
GGAGGAACGGCGGCGGTAGGAGGAAGAGGGGGAGGGGGGGGGCTGATAGA
GACCCATCCATCGCGGCCGGCGGCGCTGGCGCTGGCGAGGCGCCGTACTC
TGCCGCGCTCGTAGCGGTAGGCGCGGGCTTCAAGGACCCCAACAACGGCA
GCGGGTGGGGGTGGTACGACGAAGAGGACCACAATGCTGCTGCTGCTGAT
GGCGCGGCGGCTACCCCCGCAGGGGGGGGAGGCAGATGGAAGGATGTCGC
GGACAGCGGGCCTCGGAGGGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAG
GGGGAGGGGAGGGTCTGAGAAAGCACGATCTAGGCCAGGCGTTGAGGATG
ATCGTGTCGAACCGCGTGGTGCTGGTGCTTTTCGCGGCGTCCTCGGCTAG
GATGATTGCTACCTGGGCCTCGGCCGGGTACATGGCGGTGTACTACCACC
GGGAGTACCCCTCCCAGATCTCCCTCTACAGCGTCCTCAACGCGGGCTTC
GTGAGCGTCGGGGGCATGGCCTCCTCCTACGGGGGCGGCGTGCTCTCGGA
CCGCCTGCGCGTGCGGAACGAGGGGGTGCTCGGCTACATCCCGGCGTTGG
GGTCCCTTGCGGCCATCGGGCCCATGGCCGTCGTGCTCTTCTCCAAGGAC
TTCTACGTGTCTGTCACGGCCCTGTTCGTGAGCTACCTGGTCGGGGAGTG
CTGGCTGGGGCCTGGGATGGCTTGCTTGCAGATGGAGTTGCCCAAGGAAC
TCGCGGGCACCAGCGTGGCCATCCTGCTCTTCCTGAACTCCGTCATCTGC
AACGTCGGCACGTGGTTCATCGGGAAGATGGACAGCGGCCTGGCGACGGT
TAGGAAGCCTTTCTTCGCAGTGGTAAGCAACAGCCAGCCAACAGTAACAG
TAGTAACCACACCTCTGGGA
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