mRNA_E_fasciculatus_S2_contig8429.16561.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: PHB (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE) HSP 1 Score: 509 bits (1311), Expect = 1.650e-180 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1
Query: 1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV
Sbjct: 71 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 335
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: PHB (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI) HSP 1 Score: 467 bits (1201), Expect = 4.470e-163 Identity = 239/265 (90.19%), Postives = 253/265 (95.47%), Query Frame = 1
Query: 1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
NMA CFQC+ N+E+GV+ERLGK+ GLA PG CI+WP+D IVAK+STRVQQLDVRMETKTKDNVFVTAVVSVQYQPIK KIYDAFYRLTDP+AQIRSYV+DVVRSTLPKLDLDQAFDSKEDIA+AVKNQLEEVM+EYGYQILQALVTDMDPD RVK AMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ F+E IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV
Sbjct: 112 NMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 376
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Flagellar (associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA) HSP 1 Score: 389 bits (1000), Expect = 2.800e-134 Identity = 193/262 (73.66%), Postives = 230/262 (87.79%), Query Frame = 1
Query: 10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
CC C+ +E+GV+ER G+++ LA+PG + + WPL +V +STRVQQLDV+ ETKT DNVF+T V VQYQ + K+YDAFYRLTDPK+QIRSYVYDV+RST+PKL+LDQAF +KE++A AVK QL VMQEYGYQILQALVTD++PD RVK AMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQR+AIV GLRDS+ FS +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++++T+FLPHAP+SV
Sbjct: 6 CCCICVQTSEVGVVERFGQFEKLAKPGLSLVFWPLSQVVGTISTRVQQLDVQAETKTSDNVFITVNVCVQYQVLYDKVYDAFYRLTDPKSQIRSYVYDVIRSTMPKLELDQAFAAKEEVAHAVKEQLTVVMQEYGYQILQALVTDLEPDRRVKDAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESV 267
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S5L6_9STRA) HSP 1 Score: 330 bits (847), Expect = 4.160e-111 Identity = 167/266 (62.78%), Postives = 212/266 (79.70%), Query Frame = 1
Query: 1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQS-SRAATVFLPHAPQSV 795
N C C+ + ++ER GK+Q + PG C++WP+DSIV ++S RV+QLDV ETKTKDNVFV V+SVQYQ + K +DAFY+L +P+ QI++YV+DVVRS LPK++LD++F +KE +A VK+ L+E M +GY I++ALVTD+ PDARVK +MNEINAS+RLREAA KAEADKI+QVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+ FS I GT+PKDVMDLLLLTQYFDML+DVG S S T+FLPHAP +V
Sbjct: 4 NQCFCLACVRTNTVALVERCGKFQAIKGPGCQCLVWPVDSIVGRVSLRVRQLDVNCETKTKDNVFVNVVISVQYQVVLEKAFDAFYKLANPEIQIQAYVFDVVRSELPKMELDESFSNKEQLANEVKHHLDETMMSFGYSIIKALVTDISPDARVKMSMNEINASRRLREAAKEKAEADKIVQVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGSSGSGGKTLFLPHAPSAV 269
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9W2_9STRA) HSP 1 Score: 328 bits (841), Expect = 2.860e-110 Identity = 163/260 (62.69%), Postives = 209/260 (80.38%), Query Frame = 1
Query: 13 CFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQS 792
CF + AE+GV+ER GK+ L QPG C++ P++ +V +LS RVQQLDVR+ETKT DNVF+TAVVSVQYQ ++ K+YDAFY LT+P QI ++VYDVVRS LP L+LD F++KE++A+AVKN L E M YGYQILQ L+TD+DPD RVK AMNEIN+SKRL+ A +AE DKI+QVKAAEAE+E+KYLSGVGV++QRKAIVDGL++S+ FS+ ++G+S K VMDLLLLTQYFDM+RDVG ++ T F+P + S
Sbjct: 5 CFFTVSTAEVGVVERFGKFSRLVQPGLNCVVCPVEVLVGRLSFRVQQLDVRVETKTLDNVFITAVVSVQYQILREKVYDAFYALTNPTQQITAHVYDVVRSELPLLELDAVFEAKEELALAVKNALSETMGAYGYQILQTLITDLDPDNRVKAAMNEINSSKRLKFAVAERAEGDKILQVKAAEAESEAKYLSGVGVAKQRKAIVDGLKNSIVDFSQEVEGSSTKQVMDLLLLTQYFDMVRDVGAANHCRTTFVPSSKSS 264
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRL8_9STRA) HSP 1 Score: 328 bits (840), Expect = 4.660e-110 Identity = 167/256 (65.23%), Postives = 204/256 (79.69%), Query Frame = 1
Query: 10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
CC QCI +EIG++ERLGKY L G P++ + K+S RVQ LDVR ETKT+DNVFV VSVQYQ K KIYDAFYRL++P QIR+YV+D+VRS LP + LD+AF++KE +A+ VK L VM EYG+ I+QALVTD+ PDA+VK AMNEINASKR++EAA+ KAEADK++ VKAAEA+AESKYLSGVGV+RQRKAIVDGLRDS++ FS + GT+PKDV+DLLLLTQYFDML++VG ATVFLP
Sbjct: 6 CCVQCIQTSEIGIVERLGKYDRLQNAGINFFCCPIEYLAGKVSLRVQALDVRCETKTEDNVFVEVNVSVQYQVQKDKIYDAFYRLSNPTQQIRAYVFDIVRSVLPAMPLDEAFEAKEHVALEVKKALSAVMDEYGFVIVQALVTDIAPDAKVKNAMNEINASKRMKEAASEKAEADKVLLVKAAEADAESKYLSGVGVARQRKAIVDGLRDSIKQFSGNVQGTTPKDVIDLLLLTQYFDMLKEVGNHEYTATVFLP 261
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFY3_9STRA) HSP 1 Score: 326 bits (836), Expect = 1.760e-109 Identity = 165/265 (62.26%), Postives = 210/265 (79.25%), Query Frame = 1
Query: 1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
N CCF+ + +IGV+E LG+Y + PG TCI WP+ ++V LS R+QQLDV ETKTKDNVFV V+VQY+ I K YDA+YRL+DP+ Q+RSYV+DVVRST+P+++LD+AF SKEDIA +V QL VM +YGY+I+++LVTD+ PDARVK +MNEINAS+RL+EAA +KAEADK+ Q+KAAEAEAESKYLSG+GV+RQRKAIV+GL+DSV FSE ++G SPKDVMD+LLL+QYFD L VG +S + L H P V
Sbjct: 4 NGCCCFRYVRTQQIGVVETLGQYTKMIAPGCTCIFWPIANVVGTLSLRIQQLDVYCETKTKDNVFVQVAVAVQYRVISEKAYDAYYRLSDPREQVRSYVFDVVRSTVPRMELDEAFASKEDIANSVMEQLTTVMSDYGYEIMESLVTDLSPDARVKASMNEINASRRLKEAAQHKAEADKVKQIKAAEAEAESKYLSGLGVARQRKAIVNGLQDSVGAFSEEVEGASPKDVMDILLLSQYFDTLSAVGANS----LILEHDPAVV 264
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Predicted (protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXB1_PHATC) HSP 1 Score: 324 bits (830), Expect = 1.250e-108 Identity = 164/256 (64.06%), Postives = 206/256 (80.47%), Query Frame = 1
Query: 10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
CCF I AE+GVIER GKY L QPG I P++S+V KLS RVQQL+VR+ETKT DNVF+T+VVSVQYQ ++ K+Y+AFY L++P QI ++VYDV+RS LP L+LD F++KED+A+AVKN L E+M YGYQI+Q L+TD+DPD RVK AMNEIN+SKRL+ A +AE DKI++VK AEAEAE+KYLSGVGV++QRKAIVDGLR S+ FS+ ++G+S K+VMDLLLLTQYFDM+RDVG S T F+P
Sbjct: 4 CCFT-ISTAEVGVIERWGKYSRLVQPGLNVICCPMESLVGKLSFRVQQLNVRVETKTLDNVFITSVVSVQYQVLRDKVYEAFYALSNPARQITAHVYDVMRSQLPTLELDAVFEAKEDLALAVKNALSEIMTTYGYQIVQTLITDLDPDQRVKNAMNEINSSKRLKYAVAERAEGDKILKVKGAEAEAEAKYLSGVGVAKQRKAIVDGLRTSIVDFSDHVEGSSTKEVMDLLLLTQYFDMIRDVGAESHCKTTFVP 258
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NF76_9STRA) HSP 1 Score: 322 bits (825), Expect = 7.210e-108 Identity = 160/255 (62.75%), Postives = 202/255 (79.22%), Query Frame = 1
Query: 13 CFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
CF I +E+G+IER GKY LA PG C+ P D +V ++S RVQQ+DVR+ETKT DNVF+TA VSVQYQ ++ K+++AFY LT+ QI S++YDV+R+ LP L+LD F++KED+A+AVKN L E M YGYQILQAL+TD+DPD RVK AMNEIN+SKRL+ A +AE DKI++VK+AEAEAE+KYLSGVGV++QRKAIVDGLR S+ FS+ + GTS KD+MDLLLLTQYFD +RDVGQ S T F+P
Sbjct: 5 CFFTISTSEVGIIERFGKYSRLAHPGLGCVACPADVLVGRMSFRVQQIDVRVETKTLDNVFITATVSVQYQVLREKVFEAFYALTNAHQQITSHIYDVMRAQLPTLELDAVFEAKEDLALAVKNALSETMSLYGYQILQALITDLDPDQRVKNAMNEINSSKRLKFAVAERAEGDKILKVKSAEAEAEAKYLSGVGVAKQRKAIVDGLRTSIVDFSDGVKGTSSKDIMDLLLLTQYFDCIRDVGQESHCKTTFVP 259
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C293_9STRA) HSP 1 Score: 323 bits (827), Expect = 1.250e-107 Identity = 164/256 (64.06%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
CCF I AE+G+IER GKY LAQPG CI+ P + +V KLS RVQQLDV++ETKT DNVF+ AVVSVQYQ ++ ++DAFY LT+P QI +++YDV+RS LP L+LD F++KED+A+AVKN L EVM YGYQILQAL+TD+DPD RVK AMNEIN+SKRL+ A KAE DKI+ VK AEAEAESKYLSGVGV++QRKAI+DG+R S+ FSE + GTS KD+MDLLLLTQYFD ++ VG T F+P
Sbjct: 42 CCFT-ISTAEVGIIERCGKYNRLAQPGLGCIVCPYEQLVGKLSFRVQQLDVKVETKTLDNVFIVAVVSVQYQILRDSVFDAFYALTNPAQQITAHIYDVMRSQLPTLELDAVFEAKEDLALAVKNALTEVMSSYGYQILQALITDLDPDQRVKNAMNEINSSKRLKYAIAEKAEGDKILLVKGAEAEAESKYLSGVGVAKQRKAIIDGMRTSIAGFSEGVQGTSHKDIMDLLLLTQYFDTIQSVGGRKHCKTTFVP 296 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8429.16561.1 >prot_E_fasciculatus_S2_contig8429.16561.1 ID=prot_E_fasciculatus_S2_contig8429.16561.1|Name=mRNA_E_fasciculatus_S2_contig8429.16561.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=264bp MACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQback to top mRNA from alignment at E_fasciculatus_S2_contig8429:563..6000+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8429.16561.1 ID=mRNA_E_fasciculatus_S2_contig8429.16561.1|Name=mRNA_E_fasciculatus_S2_contig8429.16561.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5438bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8429:563..6000+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8429:563..6000+ >mRNA_E_fasciculatus_S2_contig8429.16561.1 ID=mRNA_E_fasciculatus_S2_contig8429.16561.1|Name=mRNA_E_fasciculatus_S2_contig8429.16561.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=792bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8429:563..6000+ (Ectocarpus fasciculatus EfasUO2)back to top |