mRNA_E_fasciculatus_S2_contig8425.16556.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD1_ECTSI) HSP 1 Score: 319 bits (818), Expect = 3.360e-110 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
Query: 1 MVEGDKENKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 495
MVEGDKE+KANKDAGRRATLVLVSKYPTPGSSKTRLIPALGE LAAQLAMAMLQDLL+RFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP
Sbjct: 1 MVEGDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLQRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 165
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC1_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.330e-108 Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 1
Query: 1 MVEGDKENKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 495
MVEGDKE+KANKDAGRRATLVLVSKYPTPGSSKTRLIPALGE LAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDK WDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP
Sbjct: 1 MVEGDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKAWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 165
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S136_THAOC) HSP 1 Score: 94.0 bits (232), Expect = 3.760e-20 Identity = 63/170 (37.06%), Postives = 86/170 (50.59%), Query Frame = 1
Query: 43 GRRATLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAP--PSAGPSVNKMLKDLGLDK--------------TWDAEPV-SSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDG--KAYICP 495
GR T+V+ +K P PGSSKTRL P LG+ AA LA AML D+L + D + K+ VYAP + G + K+L LGL W P+ S + L S L L +L AR + V+F+GMD+PE+P E+V +A +AY+CP
Sbjct: 2 GRNGTIVVFAKCPLPGSSKTRLAPLLGDDGAALLAQAMLSDVLSSLTACDHLQDTLKLLVYAPGDSNTGSRMTKILASLGLSSCSSESYTPRKDTTSNWVLMPMLSDSSDLTSSSLGDKLMDSLTRARELDEGSPVLFLGMDSPEVPTDEIVRGLETASSKDMPRAYMCP 171
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVY8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.040e-19 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 55 TLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRER-DGAVIFVGMDTPE 426
T++LVSK+PTPG SKTRL P +G AA +A AML D L + P + +V ++AP +A P +L+DLG++ +W P+ + L++ L L A L +R R GAV +GMD PE
Sbjct: 20 TVILVSKFPTPGRSKTRLAPLVGREGAAAVAQAMLSDKLVELT-SGPCRDVNRVLLFAPATARPKFEYLLRDLGVEDSWHLVPMIAKGDLKDPDLGDKLAAGLKDSRVAARATGAVAIIGMDCPE 143
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DJ27_HETAK) HSP 1 Score: 90.1 bits (222), Expect = 7.340e-19 Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = 1
Query: 55 TLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 495
TL+ V+K+P+ G+SKTRLIP LGE A LA AM++DL+ +FS + KV +AP A L+ + + W P+ L+ L L A + GA FVGMDTP+LP + V A + + G+A++CP
Sbjct: 4 TLIFVTKWPSIGASKTRLIPDLGEEGAFLLAKAMVEDLIIKFSSSESLQNINKVLYFAPEEAKEDACSFLQQNDITEQWVLLPMIQSNELQSPDLGDKLVHAHNTCTQWFGPGATAFVGMDTPQLPAAAVARALTEG-RGGRAFVCP 149
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QW63_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.170e-14 Identity = 63/174 (36.21%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 58 LVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKM--LKDLGLDKT------------------WDAEPVSSGTPLRESGLTTILEAALASAR--------SRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 495
+VLV+K P PG SKTRL P LG AA LA AML D+L P KV +YAP + + + LKDLGL T W P+ + T L+ S L L L R S +G V+F+GMD+PELP E+ A + + KA++CP
Sbjct: 7 IVLVAKCPIPGKSKTRLTPLLGSDGAASLARAMLSDILVTLLSSFPENVL-KVLLYAPGNEEGEAHMVDILKDLGLPYTTXXXXXXXXXXXXDVYQRWILLPMVNDTSLQSSDLGGKLSNGLNRVRTLQSKLSSSSNENGDVVFLGMDSPELPLHEISHALQISSQ--KAHLCP 177
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUD2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.680e-14 Identity = 63/174 (36.21%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 58 LVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKM--LKDLGLDKT------------------WDAEPVSSGTPLRESGLTTILEAALASAR--------SRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 495
+VLV+K P PG SKTRL P LG AA LA AML D+L P KV +YAP + + + LKDLGL T W P+ + T L+ S L L L R S +G V+F+GMD+PELP E+ A + + KA++CP
Sbjct: 7 IVLVAKCPIPGKSKTRLTPLLGSDGAASLARAMLSDILVTLLSSFPENVL-KVLLYAPGNEEGEAHMVDILKDLGLPYTTXXXXXXXXXXXXDVYQRWILLPMVNDTSLQSSDLGGKLSNGLNRVRTLQSKLSSSSNENGDVVFLGMDSPELPLHEISHALQISSQ--KAHLCP 177
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6U4_FISSO) HSP 1 Score: 75.1 bits (183), Expect = 8.140e-13 Identity = 66/205 (32.20%), Postives = 90/205 (43.90%), Query Frame = 1
Query: 55 TLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDK--------------------------------------TWDAEPVSS------GTP----------LRESGLTTILEAALASARSRER----DGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 495
++V+V+K P PG SKTRLIP G +AQLA AML D+L + + F ++ +YAPP+ V K+ + LD+ W P+S+ G P L+ S L+ ILE AL R R R DG VIFVGMDTP++P E+ A E +A +CP
Sbjct: 10 SVVVVAKCPIPGRSKTRLIPLTGVDGSAQLATAMLADVLTALTQAETEKNFDRILLYAPPT---DVGKLTMENLLDRFGIPRQRTDDNDASEVMSTKSYKSSKSDRKHTQSWNPDAWTLLPMSNEKLNSEGDPIDHSSSKPLNLKSSYLSDILENALHRVRLRLRKLKSDGPVIFVGMDTPDIPLDELAYA---LEDYKRARVCP 208
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: DUF2064 (domain-containing protein n=1 Tax=Kitasatospora sp. NA04385 TaxID=2742135 RepID=A0A7H8L699_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 2.680e-8 Identity = 53/148 (35.81%), Postives = 66/148 (44.59%), Query Frame = 1
Query: 55 TLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRFSIEDPAGEFRKVFV-------YAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDG 477
TL+LVSK P PG SKTRL PA AA LA A L D L ++ PAG R+V V + PP W+ P G GL + AA A A + VGMDTP+L + + A S+AE+ G
Sbjct: 218 TLLLVSKAPAPGRSKTRLTPAFSPEQAADLAEAALADTLAALALV-PAG--RRVLVLDGEPGRWLPPG-----------------WEVVPQCGG------GLDRRIAAAFAHAARIAPSAPALLVGMDTPQLDPAVLAAPLSAAERPG 339
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Match: Glycosyltransferase (n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5NX51_9CYAN) HSP 1 Score: 56.6 bits (135), Expect = 1.130e-6 Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 1
Query: 52 ATLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMAMLQDLLKRF-SIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEK 471
ATL++++++P PG +KTRLIPALG AAQL M + L++R ++ D A +V A S+ +M LG D T+ +P SG L L+ A RER ++ VG D P+L ++ A S+ +
Sbjct: 9 ATLIMMTRFPQPGRTKTRLIPALGAAGAAQLQQRMTELLVERLQAVCDRASLALEVHF-----ADGSLAQMHAWLGDDVTF--KPQGSGN------LGKRLQGAFQQG-FRERQQPILMVGSDCPDLGEEHIIQALSALHR 135 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8425.16556.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8425.16556.1 >prot_E_fasciculatus_S2_contig8425.16556.1 ID=prot_E_fasciculatus_S2_contig8425.16556.1|Name=mRNA_E_fasciculatus_S2_contig8425.16556.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=165bp MVEGDKENKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEVLAAQLAMback to top mRNA from alignment at E_fasciculatus_S2_contig8425:785..5720+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8425.16556.1 ID=mRNA_E_fasciculatus_S2_contig8425.16556.1|Name=mRNA_E_fasciculatus_S2_contig8425.16556.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4936bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8425:785..5720+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8425:785..5720+ >mRNA_E_fasciculatus_S2_contig8425.16556.1 ID=mRNA_E_fasciculatus_S2_contig8425.16556.1|Name=mRNA_E_fasciculatus_S2_contig8425.16556.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=495bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8425:785..5720+ (Ectocarpus fasciculatus EfasUO2)back to top |