mRNA_E_fasciculatus_S2_contig8424.16555.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8424.16555.1
Unique NamemRNA_E_fasciculatus_S2_contig8424.16555.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J668_9PHAE)

HSP 1 Score: 513 bits (1321), Expect = 9.600e-177
Identity = 367/414 (88.65%), Postives = 371/414 (89.61%), Query Frame = 3
Query:   30 MMLSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSS---RSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEIATRGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG 1262
            MMLSVLEHLA+AEGDLP ESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLES+FRAGC ALGAKSAGQQLAELQSSEAF QFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAG +S      XXXXXXXXXX X XXXXXPATGAKA DEKKAEEVKGEGNKLLLAKDYEGAEA+YTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA GDADEIATRG      XXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXX          MLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG
Sbjct:    1 MMLSVLEHLASAEGDLPSESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGGASFRXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGARGDADEIATRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXXGLASMIQNLAGVGXXXXXXXXXXAPAGGLAG--MLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG 412          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Conserved (tpr domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPK1_NANGC)

HSP 1 Score: 184 bits (466), Expect = 6.010e-51
Identity = 111/290 (38.28%), Postives = 162/290 (55.86%), Query Frame = 3
Query:   30 MMLSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 899
            + L++LE L  +     +ES      A+++L S  G+       +   S KP TL  +F AG  AL  ++ G ++A L++   F Q++  ++ KG+FK VEEGS+ Y +R  K  AKFK + E  S   P                             PA      D+ +A+ +KGEGN  + AKDYE A+  YT+A+ L P+G +SH+Y  NRAAA  +LG +  AV D Q+AI+LNPSY+KAY+RLGYA+F L+ Y  A  AY K+L+++P NAAN + L +A AK+
Sbjct:   13 LSLAILEDLQGSAQTPEMES------ALATLRSTLGVDPAQGSDIAAYSYKPATLSQIFTAGVQALKLQTVGVEMAALKADPLFQQYLGKITEKGFFKDVEEGSKAYIDRFMKAAAKFKEKQEQVSSATP----------------------------SPA------DQARADALKGEGNAAISAKDYEKADICYTKAITLVPAGASSHLYYSNRAAARSHLGNHSGAVEDAQKAIELNPSYSKAYSRLGYAHFYLQQYSKAKDAYTKALDLDPANAANKEYLAKAEAKI 262          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: SGTA_dimer (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH25_9STRA)

HSP 1 Score: 177 bits (449), Expect = 6.890e-47
Identity = 130/312 (41.67%), Postives = 180/312 (57.69%), Query Frame = 3
Query:    9 MSVDTPTMMLSVLEHLAAAEG--DLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEIATRG 938
            M+ D   +  +V+++L    G  D  ++  + + +A ++L +AFG+   D  Q +ELS +P TL+S+F AG  A GA +A Q+   +  +  F +FV V+SAK       EG+  YD +M K++A FK +      G   E         XXXXXXXXXX X XXXXX A              K EGN+ +  + +  AEA Y+ AL+LSP+GPNSH+Y CNRAAA C+L   D AV DC  +IDL+P+Y KAY RLGYAY+ +ED      AY K++E+EP N AN +SL++A AKL A   A     RG
Sbjct:    1 MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAA--EGTPEYDVQMNKIIATFKTKF-----GNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-------------KAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARG 292          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWT3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 9.270e-42
Identity = 103/282 (36.52%), Postives = 156/282 (55.32%), Query Frame = 3
Query:   72 DLPLE----SRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA 905
            DL LE    S  ++ +A   L+  F ++ +D  Q  E +L+  TL  +  AG T LGAKS  ++L ELQ ++ F QF+  V +KG+F   + G   Y  R  ++V KFK R         + ++  +S++A                      A   +E+KAE+ K EGN+ L AK+Y+ A   Y++A+++ P GP SH+Y  NRA A  YL ++  AV DC  AI+ NP+YAKAYTRLG A   L D+ +AV+ +KK++E+EP N ++ + L+ A  K  A
Sbjct:   21 DLKLEPEVGSVDNLEAATQCLAENFSINTDDINQKEEYALESQTLLELLAAGKTQLGAKSYNEELEELQENKMFQQFLGSVKSKGFFNDTKPGEPEYKARYRRMVTKFKQR---------MNDSKANSKAA--------------------VAAGPTNEEKAEKFKVEGNETLKAKNYDAAVELYSKAIDVCPDGPKSHIYFANRAMARHYLKQHLGAVDDCNAAIERNPAYAKAYTRLGLAQQALNDWSSAVENHKKAVELEPSNKSSAQYLKTAQQKYAA 273          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6P5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.530e-35
Identity = 93/246 (37.80%), Postives = 128/246 (52.03%), Query Frame = 3
Query:  189 TLESVFRAGCTALGAKSAGQQLAE---------LQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 899
            + E VF AG  ALG ++    +AE         L+  E + ++V  + +KG+FKG   GS  +  R  K +AKFK +        PV                                +KA  E KAEEVK  GN  L ++DY GA A Y EAL+LSP GP+SH+Y  N AAAL YLG+  D +  C+++I L PSY KAY+R+G A  QL+DY+ AV ++++ LE++  NAA    L  A  KL
Sbjct:   43 SFEEVFAAGLQALGLETGTAAVAEASVDEDPVVLKHPELWKKWVAKLESKGFFKGAAPGSSEHAARTTKALAKFKEKFGDVKPTAPVL-------------------------------SKAEKEAKAEEVKARGNAALTSRDYAGAAALYREALQLSPDGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIALQPSYVKAYSRMGGAQVQLKDYDGAVDSFRRGLEVDSANAACRDGLADAERKL 257          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAR9_GLOUD)

HSP 1 Score: 143 bits (361), Expect = 1.830e-34
Identity = 95/270 (35.19%), Postives = 144/270 (53.33%), Query Frame = 3
Query:  120 LSSAFGLSLEDPKQVRELSLKPH-TLESVFRAGCTALGAK--------SAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEK--KAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 896
            LS AF L++ D +Q R  +L    T E +F AG  AL  +        S  Q    L++ + + +++  +  K +F G+  GS+ +  R+ K +AKFK            E+ G   + A                  P   + + +EK  KAEE KG+GN  L A DY+ A   Y EAL+LSP+GPNSH+Y  N AAAL YLG+ D+ +   +++I L P+Y KAY+R+G+AY QL+D++ A+ A+++ LE++  NAA    L  A  K
Sbjct:   40 LSEAFKLNVHDEQQKRTYALSGSATFEDIFAAGLKALNIEIGAASPLDSVDQDPVVLKNPDLWKKWIAKLEEKNFFNGLPAGSDEHTARLKKALAKFK------------EKFGDVKKPA------------------PTAPSMSKEEKEAKAEEAKGKGNLALSAGDYKQAAVHYEEALKLSPAGPNSHIYHSNLAAALTYLGKYDEVIDHSEKSIALKPAYVKAYSRMGHAYVQLKDFDGAIDAFRRGLEVDSTNAACKDGLAEAERK 279          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: STI1 (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GML2_PHYRM)

HSP 1 Score: 140 bits (354), Expect = 1.400e-33
Identity = 91/269 (33.83%), Postives = 139/269 (51.67%), Query Frame = 3
Query:  108 AISSLSSAFGLSLEDPKQVRELSLKPH-TLESVFRAGCTALGAKSAGQQLAE-----LQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 896
            A+S L+ AFG+ + D +Q R+L++    +   +F AG  AL  ++  ++  +      +  E + ++V  + AKG+FK    G+  +  R AK + KFK +      G    E     + A                             KAEEVK +GN  L  +DYEGA   Y EAL+LSP GP+SH+Y  N AAAL YLG+  D +  C+++I L P+Y KAY+RLG A  QL+D++ A+ ++++ LE++  NAA    L  A  K
Sbjct:   33 ALSRLTEAFGVDVHDAEQRRQLAVDSDISFNEIFAAGLKALNLETGAKEAVDEDPVVKKHPELWKKWVAKLEAKGFFKDAAPGTSEHATRTAKALGKFKEKF-----GDVKPELSQEEKEA-----------------------------KAEEVKAQGNAALSRQDYEGAAKLYREALQLSPEGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIVLKPAYVKAYSRLGSAQLQLQDFDGAIDSFRRGLEVDSSNAACRDGLADAERK 267          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Uncharacterized (protein n=17 Tax=Phytophthora TaxID=4783 RepID=D0MS16_PHYIT)

HSP 1 Score: 138 bits (348), Expect = 1.010e-32
Identity = 95/276 (34.42%), Postives = 142/276 (51.45%), Query Frame = 3
Query:   99 VASAISSLSSAFGLSLEDPKQVRELSLKPHT-LESVFRAGCTAL----GAKSAGQQLAE-----LQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 896
            V +A++SL+ AFG+++ D +Q R+L++   T  + +F AG  AL    GA    + +A+      +  E + +++  + +KG+FK    GS  Y  R  K +AKFK +          EE                                   E KAEEVK +GN  L  +DYEGA   Y EAL+LS  GP+SH+Y  N AAAL YLG++ + +  C+ +I L PSY KAY+R+G A  QL+D++ A+  Y++ LE++  NAA    L  A  K
Sbjct:   30 VDAALTSLTEAFGMNVHDAEQKRQLAVNGDTSFDEIFAAGLKALNLETGAPGETKSMADEDPVVKKHPELWKKWLAKLESKGFFKDAAPGSGEYATRTNKALAKFKEKFGDVKPDLYKEE----------------------------------KEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSSDGPSSHIYHSNLAAALMYLGKHTEVIDHCEHSIALQPSYVKAYSRMGSAQVQLQDFDGAIDTYRRGLEVDSTNAACRDGLADAERK 271          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3R1_BRELC)

HSP 1 Score: 135 bits (340), Expect = 2.320e-32
Identity = 93/273 (34.07%), Postives = 136/273 (49.82%), Query Frame = 3
Query:  108 AISSLSSAFGLSLEDPKQVRELSLKPHT-LESVFRAGCTALGAKS---------AGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 896
            A+  L+ AFGLS+ DP+  R+L++   T  + +  AG  AL   +         A +     +  E + ++V  + +KG+FK    GS  Y  R  K ++KFK +      G    E                              +K   E KAEEVK +GN  L ++DY+GA   Y EAL+LSP+GP SH+Y  N AAA  Y+G+  + +  C+++I L PSY KAYTRLG A  QL+D++ A+  Y++ LEI+  N A    L  A  K
Sbjct:   34 ALPRLAEAFGLSMHDPELKRQLAINSDTSFDDIVAAGLKALNLDTGTPSEVPSIAAEDPVVKKHPELWQKWVAKLESKGFFKDALPGSSEYTTRTNKALSKFKEKF-----GDVTPEL-----------------------------SKEEKEVKAEEVKAQGNAALSSQDYDGAATLYREALQLSPNGPFSHIYHSNLAAAHMYMGKYTEVIDHCEQSIALKPSYMKAYTRLGSAQLQLQDFDGAIDTYRRGLEIDSTNDACRSGLAEAENK 272          
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GVH7_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.370e-32
Identity = 101/298 (33.89%), Postives = 153/298 (51.34%), Query Frame = 3
Query:   36 LSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPH-TLESVFRAGCTALGAK----------SAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 896
            LS +  L  +EG   ++S + V  A+  LS AFG+S+ED +Q ++L++    + + +F AG   L  +          S  +     +  E + ++V  + +KG+F G E GS  Y +R AK +AKFK            E+ G     A                    T +K   E KAEEVK EGN  L  +DYEGA   Y EAL+LS  GP+SH+Y  N AAAL YLG+  + +   +++I L P+Y KAY+R+G A  QL D++ A+ ++++ LE++  +AA    L  A  K
Sbjct:   13 LSWINELKTSEG---VDSES-VDVAVQCLSKAFGVSVEDAEQAQQLAVNGSASFDEIFAAGLKVLKLEIGTDAEAKEASVDEDPVAQKHPELWKKWVAKLESKGFFAGAEVGSSEYTKRTAKALAKFK------------EKFGDVKPVAP-------------------TMSKEEKEAKAEEVKAEGNAALSRRDYEGAATLYREALQLSADGPSSHIYHSNLAAALMYLGQYTEVIDHSEQSIALKPAYVKAYSRMGNAQVQLNDFDGAIDSFRRGLEVDSTSAACRDGLADAERK 275          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8424.16555.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized9.600e-17788.65protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Conserved6.010e-5138.28tpr domain protein (Fragment) n=1 Tax=Nannochlorop... [more]
SGTA_dimer6.890e-4741.67domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical9.270e-4236.52protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Uncharacterized2.530e-3537.80protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized1.830e-3435.19protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
STI11.400e-3333.83domain-containing protein n=1 Tax=Phytophthora ram... [more]
Uncharacterized1.010e-3234.42protein n=17 Tax=Phytophthora TaxID=4783 RepID=D0M... [more]
Uncharacterized2.320e-3234.07protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A... [more]
Uncharacterized2.370e-3233.89protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8424contigE_fasciculatus_S2_contig8424:3239..6273 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score511.5
Seed ortholog evalue4e-142
Seed eggNOG ortholog2880.D7FN86
Preferred nameSGTB
Model size1382
KEGG koko:K16365
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007029,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010604,GO:0010605,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019222,GO:0019538,GO:0019941,GO:0030162,GO:0030163,GO:0030433,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032436,GO:0032459,GO:0032460,GO:0032947,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0042176,GO:0042177,GO:0042221,GO:0042802,GO:0042803,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043621,GO:0043632,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044877,GO:0045047,GO:0045048,GO:0045184,GO:0045732,GO:0045861,GO:0045862,GO:0046907,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051205,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061024,GO:0061136,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071816,GO:0071840,GO:0072379,GO:0072380,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901799,GO:1901800,GO:1903050,GO:1903051,GO:1903052,GO:1903069,GO:1903070,GO:1903071,GO:1903332,GO:1903334,GO:1903362,GO:1903363,GO:1903364,GO:1903573,GO:1903644,GO:1903646,GO:1904288,GO:1904292,GO:1904293,GO:1904294,GO:1905897,GO:1905898,GO:2000058,GO:2000059,GO:2000060
Exons3
EggNOG free text desc.negative regulation of ER-associated ubiquitin-dependent protein catabolic process
EggNOG OGsCOG0457@1,KOG0553@2759
Ec32 ortholog descriptionTetratricopeptide TPR1
Ec32 orthologEc-15_003360.1
Cds size1374
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147,ko04516
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842501.4040437-CDS-E_fasciculatus_S2_contig8424:3238..38261696842501.4040437-CDS-E_fasciculatus_S2_contig8424:3238..3826Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8424 3239..3826 -
1696842501.418182-CDS-E_fasciculatus_S2_contig8424:4749..53821696842501.418182-CDS-E_fasciculatus_S2_contig8424:4749..5382Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8424 4750..5382 -
1696842501.4293141-CDS-E_fasciculatus_S2_contig8424:6112..62651696842501.4293141-CDS-E_fasciculatus_S2_contig8424:6112..6265Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8424 6113..6265 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842501.4463806-UTR-E_fasciculatus_S2_contig8424:6265..62731696842501.4463806-UTR-E_fasciculatus_S2_contig8424:6265..6273Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8424 6266..6273 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8424.16555.1prot_E_fasciculatus_S2_contig8424.16555.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8424 3239..6265 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8424.16555.1

>prot_E_fasciculatus_S2_contig8424.16555.1 ID=prot_E_fasciculatus_S2_contig8424.16555.1|Name=mRNA_E_fasciculatus_S2_contig8424.16555.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=458bp
MSVDTPTMMLSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPK
QVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSA
KGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAAA
PAAAAAAPAARRAAAAPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEA
RYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYA
KAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAG
GDADEIATRGGAGGGAPGAGGMPDLSGLASMMGGAGGAGGAGGGLASMIQ
GLASVGGGGGGAGGEGGGGAGGLAGMLNNPNMMAQAQQMMQNPAMMAQVQ
NMMSNPAMMQGLMGMMGGGGGGGGGGAPDMSALASMMGGGAPGAGGSGSN
DDENINS*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8424:3239..6273-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8424.16555.1 ID=mRNA_E_fasciculatus_S2_contig8424.16555.1|Name=mRNA_E_fasciculatus_S2_contig8424.16555.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3035bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8424:3239..6273- (Ectocarpus fasciculatus EfasUO2)
CAGAAACCATGAGCGTGGACACCCCGACCATGATGTTGTCGGTGCTCGAG CACCTTGCTGCCGCGGAGGGCGACTTGCCGTTGGAGTCGCGAACGCACGT GGCCTCGGCCATCTCCAGCCTCTCTTCCGCGTTCGGCCTGAGCCTGGAGG ACCCTAAGCAGGTCAGTAAGCACCCTTCCCTGGCATTCATACGGGTGCCG CAGACCATGGTCGTGTCTCGATAAGGTGGCTAAGTAATTATGAGATCAGA GGGTGGTTGCGGGTGATGTGATCGACTTTATCTTATTTACCTACACTACA TGATTTTGCAAGCTTCGCGGCTCTCGCCGGTCAGGGGCTTGGGGCATTGG CCGCATGACCGGGACCTTTGAGGTCAACCCACTGCAAGTGGTGACGTACA CTCGTTCTCCTCTGTTTCGACGCACACGCAGCAGTCACGCACCCAAATCG TAGCGACATATCGTTGGTGCAACAACAAGGCCGTGGTGCTCCCACTCTTG TCGCCAACCATCAAGCACGAATGTTGCACAGCTTTTTCACTGCCGAACAA CGGCTCCGCCAAACTGTCTCGAAAGCTACACACAAACTGTTGCCGTCGCC GTTGCAAATGCTCTGAGCTCCTAAGCTTAATGCCACAGAGAGGAAAAACG GACCGCCTTGCGAGAAAGTAAGTAACATGAGGAAATAGAACAGGGAGAGG TTACGCAGACCCTATTCCCCATCAACCCTAGCCCGAACTTCCCCGATTGC ATGCTTTGTCCAACATGTTTATTTAATAGAACAAGCCTGCGAAGGCTACT GGACAAAAACGGGTTCTCGTACAAACTCCCTCCACATGGAGAACAAACGG GTTCTCGATCTCACACCACAAAGCCGTCCGTTCCCTGACAGGTTCGTGAG CTGTCCCTGAAGCCGCACACCCTGGAGTCCGTCTTCCGTGCGGGCTGCAC CGCCCTCGGGGCCAAGAGCGCCGGCCAGCAGCTCGCCGAGCTGCAGTCCT CCGAGGCGTTCGGCCAGTTCGTCAAGGTTGTGTCCGCGAAGGGCTACTTC AAGGGGGTCGAGGAGGGCAGCGAGGGCTACGACGAGCGCATGGCGAAGCT CGTGGCCAAGTTCAAGGCGCGCACGGAGGCGGCCAGCGGCGGACCCCCCG TGGAAGAGGCCGGGGTCTCGTCCCGCTCTGCCGCCGCCCCGGCCGCGGCA GCGGCGGCGCCCGCAGCAAGGAGAGCTGCCGCGGCGCCGGCCACCGGGGC CAAGGCGGTGGACGAGAAGAAGGCGGAGGAGGTCAAGGGGGAGGGGAACA AGCTCTTGCTGGCCAAGGACTACGAAGGCGCCGAGGCCAGGTACACCGAG GCGCTCGAGCTGTCCCCCTCGGGGCCCAACAGCCACGTCTACCTCTGCAA CCGCGCGGCCGCGCTGTGCTACCTCGGACGCAACGACGACGCCGTCGTCG ACTGCCAGGAGGCCATCGACCTCAACCCGTCGTACGCGAAGGCGTACACC AGGCTCGGCTACGCCTACTTCCAGGTGCGGTGCCTCCAAAAGGTGTTGTT ATTGTGTAGCGGCTTGAGTTCGTTAGTACGTCTTCTTGGGGAAGAACTTT GGTGTGCTCTTCCCATGGAAGGTTCCGGGTGCGGTGCCTCAAAGGTTGTA GGGTGTGCGGCTGAGTTTGTGGGTGTAATTTCTGGGAAATGTTTTTTCTG TGGTGTTGTTGAGACCCTTGAGGCGCCTTCCAGAACTGTGAGCATTGCAA ACCAGTACTACTGTAGCTCACTTGAGTTAGGTGACTGGGTGTAGTTACCG CTTTGAGGTGTGGTCACTTGGGGCCTGCCACCGCGCAGCTGGCCGCAGAT GTCAGTTAGTCCGGCACTGAGCCCGTTCACACGGCACTGCTTGGCGTCCT TTGTCTGTACCGACTTCCCCAGCGGGAAGAGCGTCGTGGACGCGTGTCCG TGCAGCAGTGTGGGGTAGGCGGGTGGCCAGGCTGCTGCCCTCATTTTCTT ACGGCTACCCAAGATTGTCTTCGTTTTTGTATGCAAGCCGTTCGGGGAGT GTCGCGATCAACTCTCACCCTTGGTTCCCTTCCTTCCATTTGTGCTATCC TTTCATTTTTTTGTTGGTTGGCATTAGCCCTACTCATGAGGGTTATGACA ATTCTTCGCTGTTTGATGTGCCGACGCTGCTGGGTTTCTGTTGCTGCTCA CCCGTGAAATCATGTTGGGGTGAAGTGTCCCATCATACACCCCGGAGCTT GGGGTTCGCTTGAACCAATCGACGTTGTCGCAAGCGAGTCGATCTATGAG CCTCAATCAATAGGAGACCCACCCACCCCTCATCTGGTCCTCCATGTCTC TGTTTGGATGAACTGGGCCTGACACTCACCTCTTCTGTCCTTGTGTCTCT TTGCACCAACCTTGGCGAACACTCTTTGCGATGATGACCGCAAACAGTTG GAAGACTACGAGGCGGCCGTCAAGGCCTACAAGAAGAGCCTCGAGATCGA GCCGGGGAACGCCGCAAACACCAAGAGCCTCAGGAGGGCGACCGCCAAGC TTGGCGCGGGGGGAGACGCGGACGAGATTGCCACAAGGGGGGGGGCGGGC GGTGGCGCCCCGGGAGCGGGCGGCATGCCGGACTTGTCCGGCCTGGCGTC GATGATGGGAGGGGCCGGAGGAGCGGGGGGAGCGGGGGGCGGCTTGGCGT CTATGATCCAGGGCTTGGCCAGCGTCGGCGGTGGTGGCGGCGGCGCTGGG GGAGAGGGAGGGGGGGGGGCGGGCGGGCTCGCGGGTATGCTCAACAACCC CAACATGATGGCGCAGGCGCAGCAAATGATGCAGAACCCGGCTATGATGG CACAGGTGCAGAACATGATGTCGAACCCGGCCATGATGCAGGGGCTCATG GGCATGATGGGTGGAGGGGGGGGTGGGGGCGGCGGCGGCGCGCCGGATAT GTCGGCGCTGGCGAGCATGATGGGCGGAGGCGCGCCGGGAGCGGGCGGTT CCGGAAGCAACGACGACGAGAACATCAACAGCTGA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8424:3239..6273-

>mRNA_E_fasciculatus_S2_contig8424.16555.1 ID=mRNA_E_fasciculatus_S2_contig8424.16555.1|Name=mRNA_E_fasciculatus_S2_contig8424.16555.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1374bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8424:3239..6273- (Ectocarpus fasciculatus EfasUO2)
ATGAGCGTGGACACCCCGACCATGATGTTGTCGGTGCTCGAGCACCTTGC
TGCCGCGGAGGGCGACTTGCCGTTGGAGTCGCGAACGCACGTGGCCTCGG
CCATCTCCAGCCTCTCTTCCGCGTTCGGCCTGAGCCTGGAGGACCCTAAG
CAGGTTCGTGAGCTGTCCCTGAAGCCGCACACCCTGGAGTCCGTCTTCCG
TGCGGGCTGCACCGCCCTCGGGGCCAAGAGCGCCGGCCAGCAGCTCGCCG
AGCTGCAGTCCTCCGAGGCGTTCGGCCAGTTCGTCAAGGTTGTGTCCGCG
AAGGGCTACTTCAAGGGGGTCGAGGAGGGCAGCGAGGGCTACGACGAGCG
CATGGCGAAGCTCGTGGCCAAGTTCAAGGCGCGCACGGAGGCGGCCAGCG
GCGGACCCCCCGTGGAAGAGGCCGGGGTCTCGTCCCGCTCTGCCGCCGCC
CCGGCCGCGGCAGCGGCGGCGCCCGCAGCAAGGAGAGCTGCCGCGGCGCC
GGCCACCGGGGCCAAGGCGGTGGACGAGAAGAAGGCGGAGGAGGTCAAGG
GGGAGGGGAACAAGCTCTTGCTGGCCAAGGACTACGAAGGCGCCGAGGCC
AGGTACACCGAGGCGCTCGAGCTGTCCCCCTCGGGGCCCAACAGCCACGT
CTACCTCTGCAACCGCGCGGCCGCGCTGTGCTACCTCGGACGCAACGACG
ACGCCGTCGTCGACTGCCAGGAGGCCATCGACCTCAACCCGTCGTACGCG
AAGGCGTACACCAGGCTCGGCTACGCCTACTTCCAGTTGGAAGACTACGA
GGCGGCCGTCAAGGCCTACAAGAAGAGCCTCGAGATCGAGCCGGGGAACG
CCGCAAACACCAAGAGCCTCAGGAGGGCGACCGCCAAGCTTGGCGCGGGG
GGAGACGCGGACGAGATTGCCACAAGGGGGGGGGCGGGCGGTGGCGCCCC
GGGAGCGGGCGGCATGCCGGACTTGTCCGGCCTGGCGTCGATGATGGGAG
GGGCCGGAGGAGCGGGGGGAGCGGGGGGCGGCTTGGCGTCTATGATCCAG
GGCTTGGCCAGCGTCGGCGGTGGTGGCGGCGGCGCTGGGGGAGAGGGAGG
GGGGGGGGCGGGCGGGCTCGCGGGTATGCTCAACAACCCCAACATGATGG
CGCAGGCGCAGCAAATGATGCAGAACCCGGCTATGATGGCACAGGTGCAG
AACATGATGTCGAACCCGGCCATGATGCAGGGGCTCATGGGCATGATGGG
TGGAGGGGGGGGTGGGGGCGGCGGCGGCGCGCCGGATATGTCGGCGCTGG
CGAGCATGATGGGCGGAGGCGCGCCGGGAGCGGGCGGTTCCGGAAGCAAC
GACGACGAGAACATCAACAGCTGA
back to top