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Homology
BLAST of mRNA_E_fasciculatus_S2_contig842.16552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM95_ECTSI) HSP 1 Score: 745 bits (1924), Expect = 2.340e-265 Identity = 401/501 (80.04%), Postives = 428/501 (85.43%), Query Frame = 1
Query: 1 AINIRTSTDAKLRVDFDARPKFQQASLFATKEVIAARDLPLEERVGECVSLKLAGNEEMRNGCSDKACQLYEQALAMFWYLENRNVNWKTSGIKDEDIKEVNFCLGRGLENCTEEIRDLKVALLLNIARAYSAQSDFTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDTAIRDVSRAAKLAPSDSLIKAFMAKLRAEKAKQKDTDHATFAGMFSRGNICDPGAEAQASPLHAPPHGNLDAGRD---GKPSGDRGAGKHDLSVEDGNAEAGNANRSTAGGDPLETRRHVEERVEYFKDMARKCDEEGLDEEAEQYRERFAAIEELLSEHDRQQQERPAGHERTHIEMDWRNPSEAMLKRAREEEYDLSNPAVISFLVKMQEVHRKKLTHQESSTNQESPDSDDDQANWSADVWEGAILCMSRAEVTSFLTDELGVDPRPADTPLGTLRLLAASRVLGRPSLAEGTSSPGKRKPAVNEKGSKRTRADWRISATK 1494
AI+IRTSTDA LRVDFDARPKFQQAS+FATK+V+AARDLPLEERVGEC SLKL GNEEMRNGC DKACQLYEQALAMFWYL+N N+NWKTS IKDEDI+EVNF LGRG + TEEIRDL VALLLNIARAYSAQ+D+TTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETD AIRDVSRAAKLAPSDSLIKAFMAKL+ EKAKQK+TD ATFAGMF RGNICDPG EA+AS LHAP HGN+ AG D GKP DR AGKHDLS+E G A+AGNA RS GGDPLETRRHVEERVEY KDMARKCDEEGL+EEAEQYRERFAAIEELLS EMDWRNPSEAMLKRAREEEYDLSNPAV+SFLVKMQE+HR+KLT Q+ P+ DDDQ NWS++VWEGAILCMSRAEVTSFLT ELGVD RPADTPL TLRLLAASRVLGRPSL EG SSPG++KPA NEKGSKRT W+ K
Sbjct: 10 AISIRTSTDANLRVDFDARPKFQQASMFATKKVLAARDLPLEERVGECTSLKLEGNEEMRNGCPDKACQLYEQALAMFWYLKNHNINWKTSEIKDEDIEEVNFWLGRGSDKSTEEIRDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDSLIKAFMAKLKTEKAKQKETDRATFAGMFGRGNICDPGGEAEASRLHAPTHGNVSAGSDALRGKP--DRAAGKHDLSMEHGQADAGNATRSAGGGDPLETRRHVEERVEYLKDMARKCDEEGLEEEAEQYRERFAAIEELLSXXXXXXXXXXXXXXXXXXEMDWRNPSEAMLKRAREEEYDLSNPAVVSFLVKMQEMHRRKLT------TQQGPEDDDDQDNWSSNVWEGAILCMSRAEVTSFLTKELGVDARPADTPLETLRLLAASRVLGRPSLGEGASSPGRQKPAANEKGSKRTVWPWQRGKAK 502
BLAST of mRNA_E_fasciculatus_S2_contig842.16552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA18_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.120e-30 Identity = 134/509 (26.33%), Postives = 226/509 (44.40%), Query Frame = 1
Query: 1 AINIRTSTDAKLRVDFDARPKFQQASLFATKEVIAARDLPLEERVGECVSLKLAGNEEMRNGCSDKACQLYEQALAMFWYLENRNVNWKTSGIKDEDIKEVNFCLGRGLENCTEEIRDLKVALLLNIARAYSA--------------QSDFTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDTAIRDVSRAAKLAPSDSLIKAFMAKLRAEKAKQKDTDHATFAGMFSRGNICDPGAEAQASPLHAPPHGNLDAGRDGKPSGDRGAGKHDLSVEDGNAEAGNANRSTAGGDPLETRRHVEERVEYFKDMARKCDEEGLDEEAEQYRERFAAIEELLSEHDRQQQERPAGHERTHIEMDWRNPSEAMLKRAREEEYDLSNPAVISFLVKMQEVHRKKLTHQESSTNQESPDSDDDQANWSADVWEG--AILCMSRAEVTSFLTDELGVDPRPA---DTPLGTLRLLAASRVLGRPSLAEGTSSPGKRKPAVNEKGSKRTRA 1470
A+ ++ + A+LR +D+ P++ Q S+F + +++AR LP ER V +K GN ++A YE+ALA+F Y EN + WK GI+D+DI+ V+F + E ++ LKV+L LNI+ +F + AC L ++P +AKA Y R +AL+ P S+GA E + A+ D+ A + P + + +LR E+ KQ+ DHATF+GMF+RG + E+ P P +L E +++ VE + +A ++ G ++A + RE+ + + A +D+ NP+EAM++ ++ DL++ V L +QE H K T SST SP + + A + E + MS+ ++ L E G+D D T+R + A+++ P PG +K V + S ++R+
Sbjct: 15 AVKLKGAQQAQLRPVWDSWPQYFQHSMFMQEPIVSARTLPFHERFEMAVEIKAQGNAHFAKQEYEEAVAQYEKALALFKYCENTDPEWKKKGIRDDDIRVVDFKVEDDDEG-QNQLDALKVSLYLNISGTSPLPRRPNDKIQVCKLKMKEFALAISACGDVLKIDPHNAKAYYRRAQALITPLSSGAVEFEKALVDLELACQYDPENVECRKLYRRLREEQVKQRKLDHATFSGMFNRGTVI----ESDEKPSPPPQPESL----------------------------------------KEREMRLQKEVEDAEAIAHMYEQNGSHKQASELREKIKQV-------------KDATRAPPPRRVDFFNPTEAMIEDGKKNGIDLTDKRVQQMLSDLQEEHLAKGT-MPSSTTASSPTHQATGSKFEAALVEADEILATMSKEDIAQLLRAE-GIDFHSITDKDELKETVRSVLATKLQDLPR-------PGDKKSTVASEDSDKSRS 456
BLAST of mRNA_E_fasciculatus_S2_contig842.16552.1 vs.
Match: Hypothetical (protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AJS7_NOCSC) HSP 1 Score: 112 bits (280), Expect = 1.300e-22 Identity = 103/389 (26.48%), Postives = 189/389 (48.59%), Query Frame = 1
Query: 1 AINIRTSTDAKLRVDFDARPKFQQASLFATK--EVIAARDLPLEERVGECVSLKLAGNEEMRNGCSDKACQLYEQALAMFWYLENRNVNWKTS--GIKDEDIKEVNFCLGRGLENCTEEIRDLKVALLLNIARAYSAQSDFTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDTAIRDVSRAAKLAPSDSLIKAFMAKLRAEKAKQKDTDHATFAGMFSRGNICDPGAEAQASPLHAPPHGNLDAGRDGKPSGDRGAGKHDLSVEDGNAEAGNANRSTAGGDPLETRRHVEERVEYFKDMARKCDEEGLDEEAEQYRERFAAIEELLSEHDRQQQERPAGHERTHIEMDWRNPSEAMLKRAREEEYDLSNPAVISFLVKMQ 1155
A+ ++++ + R ++ P F Q +LF + E A R LP +ER+ LK GN+ + A YE+A ++F+Y +++ W+ + GI D+++ V+ G+ E E++ L+VA LN+A +P + KALY R KA + P + A++TD AI+D+++A L P+D+ I+ +A+LR E+++Q+ D TF GMF RG I D + P P G + + ++G G DG ++ +E+R+ + + G +++A++ ER ++ L + D++Q+++ ER DW NP+ M+ A++ DL+NP V + L++++
Sbjct: 43 AVKLKSAQIGQKRKTYETWPYFVQHTLFHGEKDEFKAWRKLPFDERMEVAERLKAEGNDLFKQNNFMDAINKYEEAPSVFYYCYSKDAGWRKNNKGIDDDELVLVDDT-GQIPEE-VEKVNQLRVACCLNLAAXXXXXXXXXXXXXXXXXXXXXDPKNIKALYRRAKARIQPTGSTAYDTDCAIKDLTKATALDPNDTTIREMLARLRVERSEQRAKDRDTFTGMFERGEIYD-----KLKPRLIPSEGEV--------AEEKGEGX--XXXXDGEEDS------------------LEKRIADAELLRDAYMSNGKEDQAKELNERIQQSKKYLKDRDKKQEQQ----ERGLTGHDWSNPTPEMIDDAKKSGIDLNNPEVRAELMRLE 392
BLAST of mRNA_E_fasciculatus_S2_contig842.16552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHA0_THAOC) HSP 1 Score: 94.0 bits (232), Expect = 1.080e-16 Identity = 102/382 (26.70%), Postives = 165/382 (43.19%), Query Frame = 1
Query: 46 FDARPKFQQASLFATK-EVIAARDLPLEERVGECVSLKLAGNEEMRNGCSDKACQLYEQALAMFWYLENRNVNWKTSGIKDEDIKEVNFCLGRGLENCTEEIRDLKVALLLNIARAYSAQSDFTTSARACSAALTL-----NPCSAKALYLRGKALVAPASAGAFETDTAIRDVSRAAKLAPSDSLIKAFMAKLRAEKAKQKDTDHATFAGMFSRGNICDPGAEAQASPLHAPPHGNLDAGRDGKPSGDRGAGKHDLSVEDGNAEAGNANRSTAGGDPLETRRHVEERVEYFKDMARKCDEEGLDEEAEQYRERFAAIEELLSEHDRQQQERPAGHERTHIEMDWRNPSEAMLKRAREEEYDLSNPAVISFLVKMQEVHRKK 1173
FD+ P Q++L+ V AR P +++ ++K GN A +LYEQAL++F YLEN+N +W+TSGIKDEDI E G E+ ++ + V N A A + +A +A+ + + SAKALYLR KA + + G E A D+ + + P ++ K +A+L Q D TF G+F RG + +G +D++ + +A+A TR + + K +A+ E+G DE+ Q +EE + ER + D+RNP + +L+ A+ DL++PA + FL ++QE +K
Sbjct: 41 FDSFPATLQSTLYDDDVRVENARRAPFLDKLAVARAIKDDGNSSFGQQRFGDALKLYEQALSIFHYLENKNTSWRTSGIKDEDIVERRHDCGND-EDQKAQLSEFMVVCYNNCALAALKLGRHQHALQAAESAVEMTAGVVSSRSAKALYLRAKARLEDKTCGHEEQSLARSDLLASIECDPDNNAAKKMLAQLNKRSRAQTKQDKETFGGLFDRGEVYMT------------------------------SGGNDVATQARDADA--------------TREEAD--ILMAKRLAQHYAEQGDDEKKHQ-------LEESI--------ERATQKPSPSVRFDFRNPPKELLEDAKSHGVDLTDPATVHFLEELQEEEERK 360
BLAST of mRNA_E_fasciculatus_S2_contig842.16552.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5M5_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.970e-8 Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = 1
Query: 46 FDARPKFQQASLFATKEVIAARDLPLEERVGECVSLKLAGNEEMRNGCSDKACQL-YEQALAMFWYLENRNVNWKTSGIKDEDIKEVNFCLGRGLENCTEEIRDLK 360
+D P+F Q S+F + E+ R ER+ LK GNE R+ C + YE ALA+F Y+EN +WK + I D+D+ +F + EEIR +
Sbjct: 3 YDGLPRFAQNSMFGSSELQDKRSGTFAERLEVATRLKEEGNELFRSAGGPLECAMKYENALAIFRYIENTRPDWKKNCIDDDDMIYHDFLADEQAASSEEEIRQAR 108
BLAST of mRNA_E_fasciculatus_S2_contig842.16552.1 vs.
Match: Predicted (protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8R9_MICPC) HSP 1 Score: 59.7 bits (143), Expect = 9.480e-6 Identity = 61/237 (25.74%), Postives = 107/237 (45.15%), Query Frame = 1
Query: 1 AINIRTSTDAKLRVDFDARPKFQQASLFATKE---VIAARDLPLEERVGECVSLKLAGNEEMRNGCSDKACQLYEQALAMFWYLENRNVNWKTSGI--KDEDIKEVNFCLGRGLENCTEEIRDLKVALLLN----IARAYSAQSDFTTSARA------CSAALTLNPCSAKALYLRGKALVAPASAGAFETDTAIRDVSRAAKLAPSDSLIKAFMAKLRAEKAKQKDTDHATFAGMF 666
A ++T+ R +++A P F + ++ K+ V +D + E++ K GNE G + A Y +A+A+F Y V + + + KD++ R + ++LLN +A+ +A+ T C+ L ++ KA Y R AL + S+ A E A++D++RAA+LAPSD+L++ + K R+E Q D T+ G F
Sbjct: 41 AAEMKTAQLKDKRREWEASPDFMKNTMAYDKDDTLVALRKDGTVREKIDHATPAKARGNELYAEGLYEDAMSEYTKAIAVFRYWNRETVGNEQNLVCFKDDETTTPTDPAARAFVS----------SVLLNASACMAKIDAARDPDTPPTHVDGIVWTCTEVLNIDDACVKAYYRRAIALASAGSSVALEK--AVKDLARAARLAPSDALVRDALRKHRSEYDAQCAKDRKTYGGAF 265
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig842.16552.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
| Match Name | E-value | Identity | Description | |
|---|
| Uncharacterized | 2.340e-265 | 80.04 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 1.120e-30 | 26.33 | protein n=1 Tax=Aphanomyces euteiches TaxID=100861... | [more] |
| Hypothetical | 1.300e-22 | 26.48 | protein n=1 Tax=Noctiluca scintillans TaxID=2966 R... | [more] |
| Uncharacterized | 1.080e-16 | 26.70 | protein n=1 Tax=Thalassiosira oceanica TaxID=15974... | [more] |
| Hypothetical | 4.970e-8 | 33.96 | protein (Fragment) n=1 Tax=Pinguiococcus pyrenoido... | [more] |
| Predicted | 9.480e-6 | 25.74 | protein n=1 Tax=Micromonas pusilla (strain CCMP154... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 0 |
| Seed ortholog score | 753.1 |
| Seed ortholog evalue | 1.1e-214 |
| Seed eggNOG ortholog | 2880.D8LM95 |
| Model size | 1869 |
| Hectar predicted targeting category | other localisation |
| Exons | 14 |
| EggNOG OGs | 2E1RR@1,2S91S@2759 |
| Ec32 ortholog description | FKBP and TPR domain protein |
| Ec32 ortholog | Ec-05_001980.1 |
| Cds size | 1869 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842500.9515162-CDS-E_fasciculatus_S2_contig842:2198..2556 | 1696842500.9515162-CDS-E_fasciculatus_S2_contig842:2198..2556 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 2199..2556 - |
| 1696842500.965342-CDS-E_fasciculatus_S2_contig842:2789..2809 | 1696842500.965342-CDS-E_fasciculatus_S2_contig842:2789..2809 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 2790..2809 - |
| 1696842500.9774933-CDS-E_fasciculatus_S2_contig842:2953..2980 | 1696842500.9774933-CDS-E_fasciculatus_S2_contig842:2953..2980 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 2954..2980 - |
| 1696842500.989303-CDS-E_fasciculatus_S2_contig842:3468..3555 | 1696842500.989303-CDS-E_fasciculatus_S2_contig842:3468..3555 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 3469..3555 - |
| 1696842501.0020561-CDS-E_fasciculatus_S2_contig842:3851..3948 | 1696842501.0020561-CDS-E_fasciculatus_S2_contig842:3851..3948 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 3852..3948 - |
| 1696842501.0219965-CDS-E_fasciculatus_S2_contig842:4870..4920 | 1696842501.0219965-CDS-E_fasciculatus_S2_contig842:4870..4920 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 4871..4920 - |
| 1696842501.035119-CDS-E_fasciculatus_S2_contig842:5349..5490 | 1696842501.035119-CDS-E_fasciculatus_S2_contig842:5349..5490 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 5350..5490 - |
| 1696842501.0471563-CDS-E_fasciculatus_S2_contig842:6600..6756 | 1696842501.0471563-CDS-E_fasciculatus_S2_contig842:6600..6756 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 6601..6756 - |
| 1696842501.0612295-CDS-E_fasciculatus_S2_contig842:7241..7482 | 1696842501.0612295-CDS-E_fasciculatus_S2_contig842:7241..7482 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 7242..7482 - |
| 1696842501.078925-CDS-E_fasciculatus_S2_contig842:7911..8061 | 1696842501.078925-CDS-E_fasciculatus_S2_contig842:7911..8061 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 7912..8061 - |
| 1696842501.0908773-CDS-E_fasciculatus_S2_contig842:8541..8733 | 1696842501.0908773-CDS-E_fasciculatus_S2_contig842:8541..8733 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 8542..8733 - |
| 1696842501.107898-CDS-E_fasciculatus_S2_contig842:9447..9578 | 1696842501.107898-CDS-E_fasciculatus_S2_contig842:9447..9578 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 9448..9578 - |
| 1696842501.119976-CDS-E_fasciculatus_S2_contig842:10315..10438 | 1696842501.119976-CDS-E_fasciculatus_S2_contig842:10315..10438 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 10316..10438 - |
| 1696842501.129735-CDS-E_fasciculatus_S2_contig842:10800..10896 | 1696842501.129735-CDS-E_fasciculatus_S2_contig842:10800..10896 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig842 10801..10896 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig842.16552.1 >prot_E_fasciculatus_S2_contig842.16552.1 ID=prot_E_fasciculatus_S2_contig842.16552.1|Name=mRNA_E_fasciculatus_S2_contig842.16552.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=623bp
AINIRTSTDAKLRVDFDARPKFQQASLFATKEVIAARDLPLEERVGECVS
LKLAGNEEMRNGCSDKACQLYEQALAMFWYLENRNVNWKTSGIKDEDIKE
VNFCLGRGLENCTEEIRDLKVALLLNIARAYSAQSDFTTSARACSAALTL
NPCSAKALYLRGKALVAPASAGAFETDTAIRDVSRAAKLAPSDSLIKAFM
AKLRAEKAKQKDTDHATFAGMFSRGNICDPGAEAQASPLHAPPHGNLDAG
RDGKPSGDRGAGKHDLSVEDGNAEAGNANRSTAGGDPLETRRHVEERVEY
FKDMARKCDEEGLDEEAEQYRERFAAIEELLSEHDRQQQERPAGHERTHI
EMDWRNPSEAMLKRAREEEYDLSNPAVISFLVKMQEVHRKKLTHQESSTN
QESPDSDDDQANWSADVWEGAILCMSRAEVTSFLTDELGVDPRPADTPLG
TLRLLAASRVLGRPSLAEGTSSPGKRKPAVNEKGSKRTRADWRISATKLV
VLQQYRWPTTGLFKWIMTGDGDGVAARVTRDSSPPDASRGDLFGEGPGGR
GRGRGDARSRPLPALLDGAEVGNAAADAAAVDLGDSLASKTLASATRTRT
SGSTEDQHSGGCDVTGGTCSAE* back to topmRNA from alignment at E_fasciculatus_S2_contig842:2199..10896- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig842.16552.1 ID=mRNA_E_fasciculatus_S2_contig842.16552.1|Name=mRNA_E_fasciculatus_S2_contig842.16552.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=8698bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig842:2199..10896- (Ectocarpus fasciculatus EfasUO2)
GCGATCAACATAAGAACGAGCACGGACGCGAAGCTACGAGTGGATTTCGA
CGCCAGGCCAAAGTTCCAGCAGGCTTCCTTGTTCGCTACCAAGGAGGTGC
GGCCAATCTCTTGTGGATATTCCGCAGCAACCCTACACTTGCACAACATA
TACAGAAAATGTTTAGACAAAGTTGTGTACAACTCGAGTTCTACTGTAGC
AAACGTTTCAGCCCAACATCGCACTACAGTAGAGTCTGTACGCAACATTT
CAGCCTTCGATTGATGTACACGGCCACACCGTAGGCGTACTTGACCCTGG
TAACGTCACAGCATGGCCGGCCGACCTTTCAACGGAGTTGTGTGAGGGCC
GACATTCACGGAAACTAAAAAAACAATACAGGAGTCGACACCCAACACTG
CCGTCCCTGTCGAGCATAGAAAGTCACCGGATTGTGTTAATGAAACTCCC
GTGGGCAGGTGATAGCAGCCCGCGACCTTCCGTTGGAGGAGAGGGTAGGG
GAATGCGTGTCGTTGAAGCTCGCGGGGAACGAGGAGATGAGGAACGGTTG
TTCCGACAAGGCGTGTCAGCTTTACGAGCAGGTACAGTTTGCAGAGAACA
ACTATTTAGCTACATTTGTTGTGGCATTGCCAGAGACTTCCACATCAAAC
ACTTACACATGCGTTTAGGGAGCAGCTGTATAAAGATATAGATATGTTCG
CACTTTCGTGCAGTTTCAAACGTCTTGTCCTGTCAAGCGAGCAAAAATCT
TGGTTTCAAGTCTTCGGGTTTGAAACGTGTTGCCATCGCCACCTCCTTAG
TCCGTTTTCAAACCACCACGAAAACCTCAAGCTACGAGCAGCACTAGACC
AGATAAGGTTCACGAGGGAATAGCGACCCAGCTCTTGAGAGTTTGACGAA
CCTGGAGAATCGACCAGAAAATTCTGCAAGAAGCGAGCAAAATAGTGTCG
AGGCGTCACCTCACCCCTCGAAGGAAAGCCAGCCTCATGAACGATATATT
ATTTACTCCGCGGAACACCTTCTGAAACTTCAGTACAGTGCAGTATAGTG
GCCAGCCCTTCGAAAGCTGCCTAACGTCAATCTTGCGTCGGCGTAGAGGT
CGGGTAGCTTGCTTTGCTGGGCACCGTTGCCCTACTTCCAAGCACTACCC
TCTCGTCGGCTGAGTGATGATGCACGACATGATCCTTGCCAGACAGTTCG
TCATCGTACGAGCTACCAATCAGCTCTGGTGTCGGTTTGCTTCATGGCTG
CTGGGAGAACTAAAACGCAACTGTCTCTATCGCCACCATCTGCATCTGAC
CCCCAAAACCTATCCTAGGCACTGGCGATGTTCTGGTACCTTGAAAACCG
CAACGTCAACTGGAAAACGAGCGGGATTAAGGACGAGGACATCAAGGAAG
TAAACTTTTGTTTAGGGCGTGGATTGGAAAATTGCACCGAGGAGATCAGG
TGCGGGATATGTGCAATTCTCTGCGTTTGTCTTGGGCTCCGTGCGTAGAG
TAGTTTTAGTTGTGGTTGTGGCTATGGCGGTAAAAGTTGTCGTTGTTGTT
GCTGACCTGTGTAACTTTGAAAAATGTCGACCCCCCTCACTCGTTTCCTC
GCGGCGCGTTCGAAGCCATTTAAAATCACTGGCTACACGCTAGGAGCAGG
GTTGAAACTGTAGCGTACTTGGCCTTAAAATGAAGAGAGCCGATTGATCC
ATACGTTCGACAACCGATGTGTTGCAGCAGTGTCCATGGGCGCTGTAGAA
ACCATGGAGACACCGAGTACGACCACAAATGAAATTAGTATTGTCGTGGC
CACCGTCACCTCTCCAAACCACGTGAGGTGAATAGCACACAGATTTTCAC
GACACGTGTACGACTCAGATGCGGCCCAAACGGAACGGTAGAAGGCGGCA
CTTCAAACCCTTACCCTTCGGTCTACCCGTGCACCGCTCTCGCGTTTCAG
CTCCCCCGCTCTCCTACTACGAACCCCTCGCATGGCGCGCCGAACAAGAG
GGTTGTCGACCAAAAGGAGGCGTTTTTTTCAGCTCCAACCCACTCAGATT
TCCCAGTACTGCATGCAACGGTCGGCGCTCGACTCTCCAGTGTCCCTTGC
TCGCCCCTCCCCCCTCCCTCCACGATCTCGACATCTCTGGTGTACGTGCC
ACCCCTTTCCCAGGGATCTCAAGGTGGCGCTGCTGCTCAACATCGCTCGG
GCGTATTCCGCCCAGAGCGACTTCACTACCTCCGCGAGGGCTTGTAGCGC
CGCGCTCACCCTAAACCCTTGCAGCGCCAAGGCCCTGTACCTGAGAGGGA
AGGCTCTCGTAGCACCTGCTTCGGCGGGGGCGTTCGAAACAGACACGGCG
ATCCGGTGAGCAGCGGAACTCCCAAGCGGCGAAAATGCGGCGGAATTCCC
CTTGATAGCATACCCCTCCCATGATGACATGCAGGGTGTATTTTCAGCGA
TGGGGTGGAGACAAATGATGTCTGTGGGCGTCACGACATCCGTGGAGACG
ATTTGGAACGAAACGTGGACTGCGACTCGGGTCTCACGGTCGGCACGGTA
CCACGTAGCCGATGTAATGGGACGGCCGTTGTGTTTCGCCCAACACAAGA
CCATGCTGGTGTAAGGGTGACAGCCATTCTGCGCGGGGGGACAGACGCCA
TTTTCTTTGTGTATGTTGTTTTACGAGCTATGCATGGACCTGGGCAGATG
ACCCCGCACTTCATCCGAGGGCACAGGGGGTTACGGACAAATCGTGACAT
TGACCTAACAACCCTGCTCCCGCCTACCCTCCTCTTTCCTCCTCTGCCTG
ATTTACCCCTACTCGGCGACTTCGTGGGACTCCAGCGACGTTTCTCGAGC
CGCCAAACTAGCCCCGAGCGATAGTCTCATCAAGGCGTTTATGGCGAAGT
TGAGGGCAGAAAAGGCGAAGCAGAAGGACACAGACCACGCGACGTTCGCC
GGCATGTTTAGCCGTGGAAATATTTGCGACCCAGGGTAAGATGAAGGCGC
GGGGCACCTAGGTCCTTACCTGAATGTTGCACACAAGGCGCTTGAGCAAA
TGCAGGGCAAGGCGCCAGCGGGCTCGTCTAGTGCTGGCGCGACTAGTAAT
TTTGATGATAGCGTTCAGCGCAGCCTCGTCCTTGTTGGGGCTGTAACGGC
TATCGCGAGAACCGACATGTATCTTGGGTGGCAATGGTACAGGTCCGCGG
CGCGAACCCGTGCGGTTGGGCCAGAGGCCTACTGGCGAGGCTGTACAAGA
GAGCCATTTTGCCGTATACCACCGTAGCGTTGGGGCCGTTCTACGCAAAC
ACAACCACGACCTCTCCAGACTCATTCCGCGTGGACATGACAGAGCAACC
TGGCCCAAGCTGAAGCGTACTTTGTCAGTAACCGCCTGGCTCTCCCCTGT
GTGCGACACTACAGAGCGGAGGCACAGGCCAGCCCTCTGCACGCGCCACC
CCACGGCAACTTGGACGCGGGAAGAGACGGAAAGCCGAGCGGGGACAGAG
GGGCAGGAAAGCACGACCTGTCCGTGGAAGATGGCAACGCCGAAGCTGGA
AACGCGAATCGGAGCACCGCAGGGGGCGACCCGCTGGAGACGCGCAGACA
CGTCGAGGAGAGAGTGGAGTACTTCAAAGACATGGCCCGGAAGTGCGATG
AAGAGGTCCGTTATCCTGCGTCGTGTCCTTCGTCGTGCGAGGGTCAATGA
CAGGCAGCTCGACGTCTTCCGTTCCGTGACACCCCCCCGCCCGAGACATC
ACAGAGAGTTTAGGCAATGAGCCATTAACCACCATTCAATCGCTCAGGGC
TGATACTAGCAAATGTAGGAAACAATGCCTCGTTACGGGGCGATGTGTGT
ACTGGACGAGTCGCGTTTACGTTTGGGACAACCTGCATGGCTGTGTTTAT
CGTCCTACTGGTTCTTGATTTCCCTCGTCATGTGTTTCGTCAGCAGCAGG
GCCTGTGAAATCACGATTTTGACAAATGATGCCAATTTCATTGTGTTACC
CTGTGAAAAGGCGACGTTCGACGATGTTGACGTCTGAACGCAAATGGACT
GTCATGGCTGACCGACTTAACATTACACGGTGACATGACGGCATGGACAA
CAATTCACAGCTTGATGCGGTCGACTGACACATCGAGCAGGGTTTGGATG
AGGAGGCCGAACAGTACCGCGAGCGCTTTGCCGCCATCGAAGAGCTGCTG
TCGGAGCACGACAGGCAGCAGCAGGAGCGCCCTGCGGGGCACGAAAGGAC
CCACATTGAGATGGACTGGAGAAATCCTTCTGAGGCAATGCTCAAGGTGC
GAAGAAGTTTGTTGGCAGACACACTAATCTTGGCGCAGGCAGGACAAAAG
TTGTGTCCCACAGAGGTGTGTACAGCAGCATCGTAGGCCGTCATCATTAC
ACCCTTCCTCAGGGTACGATCTCTGGGTTTGGAGGAGGAGGAGGGGGTTG
TTCAGCAACAGGAGCATCTCCACGCCAGTTTTGGACTTGCTATGGTGCTC
GGCATGAAAAGGGACGTTTGACTCTGCTACTTTTGTAGGGCCCTCGCGGT
ATCACAAGCATTAGTTGGGCATTTTGCGGCCGATGTACAGCCCGTGCCCA
AAACGGGCAAACTTTGGCATGTGGCGTTGGGCTTGGTCAGATTTCAACTA
TTTTGGCTTACTTTGGTCGCAGAAGAATAGGATGACCACCTCGTTGTGGC
TCGCCTTCTTTCTGTCGTCAATAGCCCAAGCATCGTCGAAGGTGGGGGAA
GATCACTTATGTATACGGGTATGAGGTCCATCAAAACATCTTAAGGCAAC
TTAGGGTTAGGCTCAGGGAAAGGGTTCCACGGACACCATCCCTGCTAAAC
GATACCAAGTGCTGTGAAACTGTTGGTAGAACGTCCGTCGTTGCGTTGAC
AATCCAAGAGTGTTTCAACAGTTCTTCGCCTGTGCGGAGAAACGGATGGA
GTTGACTGGGTCGGTGGTTGAGTTGAGGAGCCTGCCTAACATGTCGACTA
TTGCTGAACCGATGAAAATAAGAGGGTAAATGCTCCTTCTTGTGTACATT
ATGTCACAAAGAAGCTTACGAGCGGCAAACAATCACGCGGTTTTCTATGT
TTGACGTCAGGTACCGAACACGGACATGACCAACCCTGGCGAAACCCAGT
GCTTTTGATTATTAGGTCGATTTCGCGAGGTACTCGAAGCCCTAGTGCTA
CGTCTCAGACTGTCGAAGGATAAGCGTTTTTCGCATAGTCTACATAGTGC
ACAACACTTGGGCGCCTGACCCAGCGTTCTCGATTCTCATTCCGTGGGTG
CCACTCGCAGGCAACCTCCCTACCGTAGGTAGTATCGCCCTCCGAACTCC
CCTCCCCCCCAACGACCAGAATACTCTCGGCACCGTACCGCAACACCGCT
TGGCAGAGAGCCAGGGAGGAAGAATATGACCTCTCCAACCCCGCTGTGAT
CAGCTTCCTGGTCAAGATGCAAGAGGTGCACAGGAAAAAGCTGACGCACC
AGGAAAGCTCGACGAACCAGGAAAGCCCAGACAGTGATGACGACCAGGTT
TGCTCGAGGTCTATTGTATCAGAGCAGTCTTCGACTTTTTTGCGGGGCAC
GATGCCATGGAGACTTAAGGGCACCGGTGACTAGAGAAGCGGTGGCGTTA
GTTTTGGAGGCCCGGACCAGCTTACTTAGTAGATGGCGCAAAGCTTTCTC
TACCGTAGTCGACCCTCTTTCAGTGGACGCTTGTTTGAGCTACCGGGCAT
GTCCGAGTGCGTGAGCCCAGGGATAGAGTATTTCCTACAGATTCATAGTC
ACCCCCCTTCGACGGCTCGCGTTGTGTTCATGGAGCCCGGTTCAGTTTCG
CTGGGTTTTAGATCGATCGAGGGTGGTTGGAGCTGCCATCCGACGCCGTA
AAAGGTACAACCGCCATGCAAGGTCACCAAAATGTCGTTCCCCACAACAC
CGCTCGTGGATGCTGCCCTTCTGTAGGCGAACTGGAGCGCAGATGTCTGG
GAAGGCGCCATCCTCTGTATGTCACGGTGAGTGAGTGCGCGACATCGATC
GGCCAGTTTGCAGGCGTATGTCGAAGCGCATCGGTTTATTGCTTACAAAT
ATCCATTTGAGAAACGATAATGGTATCAGATATGCGCGAAGGTAGAGCCT
GTCCTGACAATGGTTCTGGGTGTGTAGGTGTGGATTTGTCAGTGAATATG
CTCGACTTTGTGTGGTACGTCATGTCCAAGGTCCCCCCGAGGCGTTCACT
GCCAACATGATCGCTATTTGGTGACGTGAAGCGCTGTAGCGGGCGAACCA
TTCGGAACAGTGGCCACCGAACTCTCTAAGTTGAAGACCCGTGAAGAACC
AGAGGGAGTATGGGCAGCGGTGGATCATCGCCCTCATAAGCTCACAACCT
GTGAGCCGGCGCGTGGGCGGTAGGTGTAGCGCCAGCTGCCGCACGGCCGT
ATCGTCGGGGAGAGAACAATGCGCGATTGTGGTGTGTACGGGGAAAGTAT
ATGACGTACAACGTTTGGCCGCAGACAGGGAAAATCACCAACCTTCACAC
TTGATTGTCTGGGCGCTAAGTGTCTTAGAATTGAATAGCGTCCGTCGACA
TTCTACAGGCATTTTGAATAGTTCATACGGATACATCGACGAGAGAGGAA
GGAGGATGAGACATGCTCAAGGGCTCGTTCCGGAGCCCGCACTGTCTCTC
AACCTCTCCGTCCAGAAATAAATAAACAGAATCTCTACTCCCGCAAAAAC
ATCCCAAGCCCCCTCGAAATCTTGTGTAGTAGAGCAGCTGTGCTTGCCCT
GAGCGCACGCATACGATCGTATGAAGCCCGCGCAAGGTCGACGTTTCGTT
TCTTTCGGCGGATCGCCTCATCGTCACTGACTTCGTACCCTTCGGTTTAA
TCCATCTTCTGGAATATCATTCTCCGCGGACGGTTTGCTGCCGCTCAGAG
CGGAAGTGACGTCCTTCTTGACGGACGAGCTGGGCGTTGACCCTAGGCCT
GCTGACACCCCTCTGGGCACGCTGAGGCTCCTGGCCGCGAGCCGGGTGAG
CCAGCTCGAAAGTACGGTAGAGAGTGGGACTGGCATCGCTGTCGACGACG
AATGACTGGACGTACGTGCGTCATCGTTTCAATTGAAATCGTTTTTGCTA
CACTCGCATTGAACGAAATCATAACCCTAATCATATCGGTAGTGTTGCCG
CGCGCCTGCAGCCGAAGCTCTCGGCTTGATATTTTTGGATTTGCCCGACC
GAGCGAGGAGGAGTTGTCCGCGTGGGGGGCTGGAAACCTAAGATTCACGT
GTTTGACCGTTTGACCCGGTTTCGACACGCGCGTACTTCAGGTGCTGGGT
CGGCCTTCTCTCGCCGAGGGGACTTCTTCGCCCGGCAAGCGGAAACCGGC
AGTGAATGAGAAAGGATCGAAACGAACGGTATGCCGGTGGTAGAAGAGAA
AACGAGGGCACTCACAAGCGTACAGTGTACTGGGTTATTCGGTGCTCGAC
CGAGGAAAAAGTTATATTAGGGATGAAAGGATGGCACAAAGTCAATACTT
CTTGTTTTCATGCGGGAGGCTGAAGAGGTTACGGCAGTTACCTCGTGCGG
AGACCCACACACAACGACCTACACGCTCCCATCCAGCCAGCGCAGTCCTT
CCTTCAACAGCTCGTTGTCCACTCGGACAGGTCGGCCTCCAGCATTCATT
CTGGCAGTTTGACAATCAACAGATCCGTGGTTGGAGCTCTTCGGCGAATT
GCCAATCTTTGCGATGATCTAGTACCTGCCGTTGGCATTGCGTGCTCGTG
GTAGCTATGCTGCATAGCTCCTGCAAGGCGAGGAAACAAGAATTCGCTCC
CCTAAGTCACCCCCTACCCCACGGTGATGTCGTCCATCCACGTCAATGGC
AAACGCGACGAATCAGAGGGCCGACTGGAGAATCTCGGCGACCGTGACGC
TTCTGCTCTTCCTTTTGAAGGCATACCAGATGGGGGAGGAGAGGAGGAAA
GACGAGAGGAAAAAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAATTGGTGGTTC
TACAGCAGTGTAGATCCAAGACAGCCACGGATTAGTATTGGGAAAGAATT
CAAGAGGGAAGACATGCGCGCATGGAGGCACGACGTTTACTTGGGAGGCG
GCGCAGATGTTGGCGCACCTCGAATCTTGACGTGCATGCTCCCCTAGGAG
TCGCCGGCATCGGACACGGTCCATACCATGCGCTATAGGCCTTTCCGAAC
ACCAAACGCTGATTTTCATCGTACATCGATTACCAACTAGATATCGTTGG
CCCACCACAGGTCTGTTCAAGTGGATAATGACGGGAGACGGTGATGGTGT
AGCGGCAAGAGTCACGCGCGATTCTTCGCCTCCAGATGCGAGCCGCGGGG
ACCTCTTCGGGGAAGGGCCAGGGGGGCGAGGAAGAGGACGAGGAGATGCG
AGAAGCAGACCTCTCCCGGCCCTTCTTGACGGGGCCGAGGTAGGAAACGC
GGCCGCTGATGCCGCTGCCGTTGACTTGGGCGACAGCCTCGCCTCCAAGA
CACTTGCGTCAGCCACCAGAACGAGGACGTCAGGTTCAACGGAAGATCAA
CATAGCGGTGGGTGCGACGTCACTGGTGGCACGTGCAGCGCAGAGTGA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig842:2199..10896- >mRNA_E_fasciculatus_S2_contig842.16552.1 ID=mRNA_E_fasciculatus_S2_contig842.16552.1|Name=mRNA_E_fasciculatus_S2_contig842.16552.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1869bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig842:2199..10896- (Ectocarpus fasciculatus EfasUO2)
GCGATCAACATAAGAACGAGCACGGACGCGAAGCTACGAGTGGATTTCGA
CGCCAGGCCAAAGTTCCAGCAGGCTTCCTTGTTCGCTACCAAGGAGGTGA
TAGCAGCCCGCGACCTTCCGTTGGAGGAGAGGGTAGGGGAATGCGTGTCG
TTGAAGCTCGCGGGGAACGAGGAGATGAGGAACGGTTGTTCCGACAAGGC
GTGTCAGCTTTACGAGCAGGCACTGGCGATGTTCTGGTACCTTGAAAACC
GCAACGTCAACTGGAAAACGAGCGGGATTAAGGACGAGGACATCAAGGAA
GTAAACTTTTGTTTAGGGCGTGGATTGGAAAATTGCACCGAGGAGATCAG
GGATCTCAAGGTGGCGCTGCTGCTCAACATCGCTCGGGCGTATTCCGCCC
AGAGCGACTTCACTACCTCCGCGAGGGCTTGTAGCGCCGCGCTCACCCTA
AACCCTTGCAGCGCCAAGGCCCTGTACCTGAGAGGGAAGGCTCTCGTAGC
ACCTGCTTCGGCGGGGGCGTTCGAAACAGACACGGCGATCCGCGACGTTT
CTCGAGCCGCCAAACTAGCCCCGAGCGATAGTCTCATCAAGGCGTTTATG
GCGAAGTTGAGGGCAGAAAAGGCGAAGCAGAAGGACACAGACCACGCGAC
GTTCGCCGGCATGTTTAGCCGTGGAAATATTTGCGACCCAGGAGCGGAGG
CACAGGCCAGCCCTCTGCACGCGCCACCCCACGGCAACTTGGACGCGGGA
AGAGACGGAAAGCCGAGCGGGGACAGAGGGGCAGGAAAGCACGACCTGTC
CGTGGAAGATGGCAACGCCGAAGCTGGAAACGCGAATCGGAGCACCGCAG
GGGGCGACCCGCTGGAGACGCGCAGACACGTCGAGGAGAGAGTGGAGTAC
TTCAAAGACATGGCCCGGAAGTGCGATGAAGAGGGTTTGGATGAGGAGGC
CGAACAGTACCGCGAGCGCTTTGCCGCCATCGAAGAGCTGCTGTCGGAGC
ACGACAGGCAGCAGCAGGAGCGCCCTGCGGGGCACGAAAGGACCCACATT
GAGATGGACTGGAGAAATCCTTCTGAGGCAATGCTCAAGAGAGCCAGGGA
GGAAGAATATGACCTCTCCAACCCCGCTGTGATCAGCTTCCTGGTCAAGA
TGCAAGAGGTGCACAGGAAAAAGCTGACGCACCAGGAAAGCTCGACGAAC
CAGGAAAGCCCAGACAGTGATGACGACCAGGCGAACTGGAGCGCAGATGT
CTGGGAAGGCGCCATCCTCTGTATGTCACGAGCGGAAGTGACGTCCTTCT
TGACGGACGAGCTGGGCGTTGACCCTAGGCCTGCTGACACCCCTCTGGGC
ACGCTGAGGCTCCTGGCCGCGAGCCGGGTGCTGGGTCGGCCTTCTCTCGC
CGAGGGGACTTCTTCGCCCGGCAAGCGGAAACCGGCAGTGAATGAGAAAG
GATCGAAACGAACGAGGGCCGACTGGAGAATCTCGGCGACCAAATTGGTG
GTTCTACAGCAATATCGTTGGCCCACCACAGGTCTGTTCAAGTGGATAAT
GACGGGAGACGGTGATGGTGTAGCGGCAAGAGTCACGCGCGATTCTTCGC
CTCCAGATGCGAGCCGCGGGGACCTCTTCGGGGAAGGGCCAGGGGGGCGA
GGAAGAGGACGAGGAGATGCGAGAAGCAGACCTCTCCCGGCCCTTCTTGA
CGGGGCCGAGGTAGGAAACGCGGCCGCTGATGCCGCTGCCGTTGACTTGG
GCGACAGCCTCGCCTCCAAGACACTTGCGTCAGCCACCAGAACGAGGACG
TCAGGTTCAACGGAAGATCAACATAGCGGTGGGTGCGACGTCACTGGTGG
CACGTGCAGCGCAGAGTGA back to top
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