mRNA_E_fasciculatus_S2_contig841.16544.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig841.16544.1
Unique NamemRNA_E_fasciculatus_S2_contig841.16544.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: AN1 (and C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYN8_ECTSI)

HSP 1 Score: 479 bits (1233), Expect = 8.480e-169
Identity = 275/308 (89.29%), Postives = 282/308 (91.56%), Query Frame = 1 
Query:    1 MPEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDARAFAAGAAARRMSAQANQSRPMSLREKAAQRRAAASSHRDAGANTARATADRRRRENPAAQARSLGGGGGHSEQCPQCGATFGDIGSLVAHVEAFHSEGQQFHAHGGGGGXXXSNAGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----TSSGASSCSI 909
            MPEFTGVGKHCGAENCNQQDFLPF+CDCC+GTFCLSHRSYAAHSC ASG+KDFRALVCPLCKKTVRFN GQDPN+QWDLHTRTDCNP DYKR K TKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDAR  AA AAARRM+AQANQSRPMSLREKAAQ RAAASS RDA ANTARATADRRRRENPAAQARS GG GG SEQCPQCGATFGDIGSLVAHVEAFHSEGQQF AHGGGGGXXX ++GETXXXXXXXXXXXXXXXXXXXXXXXXX          TSSGASSCSI
Sbjct:    1 MPEFTGVGKHCGAENCNQQDFLPFECDCCNGTFCLSHRSYAAHSCAASGNKDFRALVCPLCKKTVRFNGGQDPNQQWDLHTRTDCNPEDYKRAKQTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDARGSAAAAAARRMAAQANQSRPMSLREKAAQNRAAASSRRDADANTARATADRRRRENPAAQARSFGGSGGQSEQCPQCGATFGDIGSLVAHVEAFHSEGQQFRAHGGGGGXXXXSSGETXXXXXXXXXXXXXXXXXXXXXXXXXAREGSSSQGATSSGASSCSI 308
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: AN1-type (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G4_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.300e-50
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = 1 
Query:    1 MPEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNC 408
            M EFT +G+ C A  CN +DFLPF CDCC   FCL+HRSYA+H CP SG K+  A+VCPLCK T+R +  QD N +W+ H RT C+P   K  K  +KRC A  CR VLG +N+  CA C    CLTHRF +SHNC
Sbjct:    1 MAEFTEIGQRCSAPLCNLKDFLPFDCDCCQQVFCLNHRSYASHECPLSGTKNMTAIVCPLCKSTIRLSDAQDANAEWERHARTSCSPE--KAAKKARKRCNADGCREVLGLSNSHTCAQCHAAVCLTHRFAESHNC 134
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: Zf-AN1 (domain-containing protein/zf-C2H2_6 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3ANI2_CEPFO)

HSP 1 Score: 168 bits (425), Expect = 9.670e-47
Identity = 98/249 (39.36%), Postives = 133/249 (53.41%), Query Frame = 1 
Query:    4 PEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDARAFAAGAA--ARRMSAQANQSRPMSLREKAAQRRAAASSHR-DAGANTARATADRRRRENPAAQARSLG-----GGGGHSEQCPQCGATFGDIGSLVAHVEAFHSE 726
            PEF  +GKHC  + C   DFLPF CD C   FCL HRSY  H+CP +   D   ++CPLC K VR N  +DPN  W+ H  TDC+P+DY R    KK+C    CR VL  + T +C  C  + CL HRF   HNC    + DA     G    +R+ +++ NQ +  S  + A+     AS+ R  A A+ A+ +++  ++   A            GG G  E+CPQCGA F  + +LV HVE FH +
Sbjct:    4 PEFPDLGKHCTVDECKLIDFLPFTCDRCTQVFCLEHRSYTKHNCPKADRNDVTVVICPLCAKGVRLNPDEDPNITWETHVNTDCDPSDYDR-VTKKKKCPVPGCREVLAFSTTIKCRDCTIDHCLKHRFGPDHNCPGPKKPDAGFPFIGLLNRSRKETSKPNQVQATSSSKWASSFLNVASTVRATAEASMAKLSSEISQKWQIATDGMGSSNNSGIGGSGQVEECPQCGAKFSSVTTLVEHVEKFHEK 251
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: zinc (finger AN1 and C2H2 domain-containing stress-associated protein 13-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C9D29)

HSP 1 Score: 167 bits (423), Expect = 1.310e-46
Identity = 92/243 (37.86%), Postives = 130/243 (53.50%), Query Frame = 1 
Query:    4 PEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDAR----AFAAGAAARRMSAQANQSRPMSLREKAAQRRAAASSHRDAGANTARATADRRRRENPAAQARSLGGGGGHSEQCPQCGATFGDIGSLVAHVEAFH 720
            PEF  +GKHC  ++C   DFLPF CD C   FCL HRSY  HSCP     D   ++CPLC K VR N  +DPN  W+ H  TDC+P++Y++    KK+C    CR  L  +NT +C  C  + CL HRF   HNC    + +       F + +++R+ + ++N++ P S            SS   +  ++A A+  R   +       +    GG++E+CPQCGA F  +GSLV HVE  H
Sbjct:    4 PEFPDLGKHCSVDDCKLIDFLPFTCDRCLQVFCLDHRSYIKHSCPKGNRGDVTVVICPLCAKGVRLNPDEDPNITWEKHVNTDCDPSNYEK-ATKKKKCPVPRCREALTFSNTIKCRDCNLDHCLKHRFGPDHNCPGPKKPEQSFPFMGFLSTSSSRKEATKSNRA-PTSSNS---------SSRWSSLLSSAEASLSRLSTDISQKLQFASSSNGGNAEECPQCGAKFSSVGSLVEHVEKVH 235
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: Aste57867_18181 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9P1_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.610e-46
Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 1 
Query:   19 VGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNC 408
            +G+HC    CNQ+DFLPF CDCC+G FCL HR+Y AH+C  +G KD RA+ CPLC+ T+     QD N  +D HTRT+CNP  Y   K  K RC A +CR VL  +NT +C +C K+ CL HRF   H C
Sbjct:    5 IGEHCSKPGCNQKDFLPFACDCCEGVFCLEHRTYTAHACTNAGSKDSRAITCPLCRATIPLTNDQDVNHVFDQHTRTNCNPDKYNEKKKAKARCEAENCREVLTASNTVQCNACRKKVCLKHRFESDHQC 134
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: Zinc (finger AN1 and C2H2 domain-containing stress-associated protein 16 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DV82_TRIWF)

HSP 1 Score: 167 bits (423), Expect = 1.270e-45
Identity = 97/249 (38.96%), Postives = 137/249 (55.02%), Query Frame = 1 
Query:    4 PEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDARAFAAGAAARRMS--AQANQSRPMSLREKAAQRRAAASSHRDAGANTARATADRRRRENPAAQARSLGGGGGHSEQCPQCGATFGDIGSLVAHVEAFHSE-GQQFH 741
            P+F  +GKHC  E+C Q DFLPF CD C   FCL HRSY  H+CPA+  K+   ++CPLC K VR N  +DPN  W+ H  ++C+P++Y++    KK+C    C+ VL  +NT +C  C  + CL HRF   HNCS   + D+     G   R  S  ++  ++ P S  + AA    AAS+ R A A        +  R+   + + +  G    +E+CPQCGA F  + +LV HVE  H + G Q H
Sbjct:    4 PQFPDLGKHCTVEDCKQIDFLPFTCDRCRQVFCLEHRSYVKHNCPAADRKNVTVVICPLCAKGVRLNPDEDPNITWETHVNSECDPSNYEK-VTKKKKCPVPGCKEVLTFSNTLKCKDCNVDHCLKHRFGTDHNCSGPRKPDSGFPFIGLLNRIRSDVSEPKKAPPTSSSKWAASFLNAASNVR-ASAEAGMTKLGQMARDGLGSSSSNGRGETAQTEECPQCGAKFSSVTTLVEHVEKVHEKKGNQGH 250
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: Uncharacterized (protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K2L3_JATCU)

HSP 1 Score: 165 bits (417), Expect = 1.350e-45
Identity = 97/245 (39.59%), Postives = 132/245 (53.88%), Query Frame = 1 
Query:    4 PEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKR-CAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDA--RAFAAGAAARRMSAQANQSRPM-SLREKAAQRRAAASSHRDAGANTARATADRRRRENPAAQARSLGGGGGHSEQCPQCGATFGDIGSLVAHVEAFHSE 726
            P+F  +GKHC  E+C Q DFLPF CD C   FCL HRSYA H+C  +  KD   ++CPLC K VR N  +DPN  W+ H  T+C+P++Y  +K TKKR C    CR VL  +NT RC  C  + CL HRF   H+C    + +   +  A    +R+  ++  QS+   S R   A R AA+S    A A  A+ + +  +              GG  E+CPQCGA F  + +LV HV+  H +
Sbjct:    4 PQFPDLGKHCNKEDCRQIDFLPFTCDRCSQIFCLEHRSYAKHNCLKADSKDVTVVICPLCAKGVRLNPDEDPNISWETHVNTECDPSNY--DKVTKKRKCPVRGCREVLTFSNTIRCRDCTIDHCLKHRFGPDHSCPGPKKPEMGFQFMALLNRSRKEESKPKQSQATPSGRWATAFRNAASSVRASAEAGMAKLSTEISQALQTTKSDAGPSSTGGLEEECPQCGARFSSVTTLVEHVQKLHEK 246
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYI5_9STRA)

HSP 1 Score: 162 bits (411), Expect = 7.000e-45
Identity = 66/130 (50.77%), Postives = 82/130 (63.08%), Query Frame = 1 
Query:   19 VGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNC 408
            +GKHC    CNQQDFLPF+CDCC G FCL HR+Y  H C  +G KD RA+ CPLC+ T+      D N  W+ H R DC P  Y+ NK  K RCAA +CR +L  +N+  C++C K+ CL HRF   H C
Sbjct:    3 IGKHCSKPGCNQQDFLPFECDCCHGVFCLEHRTYEDHECVHAGAKDSRAITCPLCRGTIPLTGNMDVNIVWENHARNDCKPEKYQENKKAKVRCAAETCREILTASNSVVCSTCHKKVCLRHRFETDHQC 132
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BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U802_VOLCA)

HSP 1 Score: 160 bits (404), Expect = 5.400e-44
Identity = 92/239 (38.49%), Postives = 119/239 (49.79%), Query Frame = 1 
Query:   19 VGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDARAFAAGAAARRMSAQANQSRPMSLREKAAQRRAAASSHR-----DAGANTARATADRRRRENPAAQARSLGGGGGHSEQCPQCGATFGDIGSLVAHVEAFH 720
            +G HC  E+C Q DFLPF+CDCC+ TFCL HRSY AHSCP +G K+   +VCP+C K +R   GQDP+E +D+H RTDC+PA+Y R    K RC  + C+  L   N  RC  C +  CL HR P  H C  +  G     A  +  R     ++ + P                 R     D G N++ A        NP              E CPQCGA+F  +  L+ HVE FH
Sbjct:    2 IGDHCSVEDCGQIDFLPFKCDCCNRTFCLEHRSYVAHSCPNAGAKETTVIVCPICAKGMRLKPGQDPSEAFDVHQRTDCDPANYDRVHK-KPRCPVSGCKEKLTTINAYRCKHCSQRVCLRHRDPGDHKCIEAQGGLGILSACTSMKRSRDCLSSAAAPSXXXXXXXXXXXXXXXXRNRNLNDNGINSSNA--------NPLIPPHL-------PELCPQCGASFATVERLIQHVEDFH 224
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Match: Zinc (finger AN1 and C2H2 domain-containing stress-associated protein 16 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9RRL3_9ROSA)

HSP 1 Score: 159 bits (401), Expect = 3.560e-43
Identity = 91/246 (36.99%), Postives = 129/246 (52.44%), Query Frame = 1 
Query:    4 PEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGDKDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDARAFAAGAAAR-RMSAQANQSRPMSLREKAAQR--RAAASSHRDAGANTARATADRRRR----ENPAAQARSLGGGGGHSEQCPQCGATFGDIGSLVAHVEAFH 720
            PEF  +GKHC  ++C Q DFLPF CD C+  FCL HRSY  H+CP +  +D   ++CPLC K VR    +DPN  WD H  TDC+P++Y++    KK+C    C+ +L  +NT +C  C  + CL HRF   H C    + ++     G   R R   Q     P +   K A     AA+S    A A+  + + +  ++    ++   Q+    G  G  E+CPQCGA F  + +LV HVE  H
Sbjct:    4 PEFPNLGKHCAVDDCKQIDFLPFTCDRCNLVFCLEHRSYIKHNCPKADRQDVTVVICPLCAKGVRLIPDEDPNITWDTHVNTDCDPSNYEK-VTKKKKCPVPGCKEILTFSNTLKCRDCLVDHCLKHRFGPDHKCPGPKKPESNFPFMGLLNRSRKEEQRPNKAPATSSPKWATNFLNAASSVRASAEASMMKLSNEISQKWQIAKDSVGQSSGNSGRNGEIEECPQCGAKFSSVTTLVEHVEKVH 248
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig841.16544.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
AN18.480e-16989.29and C2H2 zinc finger protein n=2 Tax=Ectocarpus Ta... [more]
AN1-type1.300e-5055.15domain-containing protein n=1 Tax=Tribonema minus ... [more]
Zf-AN19.670e-4739.36domain-containing protein/zf-C2H2_6 domain-contain... [more]
zinc1.310e-4637.86finger AN1 and C2H2 domain-containing stress-assoc... [more]
Aste57867_181813.610e-4652.31protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Zinc1.270e-4538.96finger AN1 and C2H2 domain-containing stress-assoc... [more]
Uncharacterized1.350e-4539.59protein n=1 Tax=Jatropha curcas TaxID=180498 RepID... [more]
Uncharacterized7.000e-4550.77protein n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more]
Uncharacterized5.400e-4438.49protein (Fragment) n=1 Tax=Volvox carteri f. nagar... [more]
Zinc3.560e-4336.99finger AN1 and C2H2 domain-containing stress-assoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig841contigE_fasciculatus_S2_contig841:2613..8560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score483.0
Seed ortholog evalue1e-133
Seed eggNOG ortholog2880.D7FYN8
Model size915
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0008150,GO:0009719,GO:0009725,GO:0009737,GO:0010033,GO:0010200,GO:0010243,GO:0033993,GO:0042221,GO:0042493,GO:0050896,GO:0097305,GO:1901698,GO:1901700
Exons7
EggNOG free text desc.zinc ion binding
EggNOG OGsKOG3183@1,KOG3183@2759
Ec32 ortholog descriptionAN1 and C2H2 zinc finger protein
Ec32 orthologEc-17_000160.1
Cds size915
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig841.16544.1prot_E_fasciculatus_S2_contig841.16544.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig841 2613..8560 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842500.1267903-CDS-E_fasciculatus_S2_contig841:2612..27031696842500.1267903-CDS-E_fasciculatus_S2_contig841:2612..2703Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig841 2613..2703 +
1696842500.143096-CDS-E_fasciculatus_S2_contig841:4295..44311696842500.143096-CDS-E_fasciculatus_S2_contig841:4295..4431Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig841 4296..4431 +
1696842500.15487-CDS-E_fasciculatus_S2_contig841:5286..53551696842500.15487-CDS-E_fasciculatus_S2_contig841:5286..5355Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig841 5287..5355 +
1696842500.1656728-CDS-E_fasciculatus_S2_contig841:5859..59611696842500.1656728-CDS-E_fasciculatus_S2_contig841:5859..5961Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig841 5860..5961 +
1696842500.1765218-CDS-E_fasciculatus_S2_contig841:6379..65541696842500.1765218-CDS-E_fasciculatus_S2_contig841:6379..6554Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig841 6380..6554 +
1696842500.187141-CDS-E_fasciculatus_S2_contig841:7799..79521696842500.187141-CDS-E_fasciculatus_S2_contig841:7799..7952Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig841 7800..7952 +
1696842500.1976562-CDS-E_fasciculatus_S2_contig841:8371..85601696842500.1976562-CDS-E_fasciculatus_S2_contig841:8371..8560Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig841 8372..8560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig841.16544.1

>prot_E_fasciculatus_S2_contig841.16544.1 ID=prot_E_fasciculatus_S2_contig841.16544.1|Name=mRNA_E_fasciculatus_S2_contig841.16544.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=305bp
MPEFTGVGKHCGAENCNQQDFLPFQCDCCDGTFCLSHRSYAAHSCPASGD
KDFRALVCPLCKKTVRFNAGQDPNEQWDLHTRTDCNPADYKRNKPTKKRC
AAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCSASSRGDARAFAAG
AAARRMSAQANQSRPMSLREKAAQRRAAASSHRDAGANTARATADRRRRE
NPAAQARSLGGGGGHSEQCPQCGATFGDIGSLVAHVEAFHSEGQQFHAHG
GGGGGGGSNAGETCPICNLHFPDVALLVSHVEAAHPDGAQGNATSSGASS
CSIS*
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mRNA from alignment at E_fasciculatus_S2_contig841:2613..8560+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig841.16544.1 ID=mRNA_E_fasciculatus_S2_contig841.16544.1|Name=mRNA_E_fasciculatus_S2_contig841.16544.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5948bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig841:2613..8560+ (Ectocarpus fasciculatus EfasUO2)
ATGCCGGAGTTTACGGGCGTCGGGAAGCACTGCGGGGCAGAGAACTGCAA
TCAGCAGGACTTCCTTCCGTTCCAGTGTGACTGTTGTGACGGTGAGAGGA
GAGTTAACGCTCTACAGCTAGCAGTAGCACGGTAGTTGGTCGACAACAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGTTGATGTTGGTGA
GCCTTTCTCAAGCGTCCCAATTCTACTTTCCAGTCATTTATGCATAGGAC
GAGCAACAAGGCCTCTTGCAGTGTTCCATGATGCATCTCAACGTCTGTAG
CGTTCACGTCTTCAGCAGATGACAAAATACATCAACCGTTCACAACCAGG
CCAGCAGCCACACACAACACACAACACACACTGTTGCAAGGAGTCCTTAC
AGCAGTTAAGTATTTCGTGGCACAGCAAATCAGTATCACCACACTGCTTT
TGGAAGGAAGGGCTCCCCCCCACATCCCACATGGTACAGGTACTCCTAGC
TCTACATGATCCTCAAGGCCGGGTTCAGTGCTCTTGCCGCCTGGTGGCCT
CCGGCACACACGAATATATCTACCAATGTCCTCTGAGTCTACAACCGCCC
AAGGTGCTTCTATGCAGTCTGTGACAAGAGTTTGGCGGTTGTTGTTCACA
CCAACCACATGCAACCGCGTTTGGAAATTTCTCATCGAGTTACAGGGTTC
GCAAATGACATGTCTGTGTACCTGTAGACCACGCAAGTATTGCTGTCTGT
TTCTATACGCAGTGTTCGACAACCTGGGATAGTCAATAGTCAAATAGACT
ACCGTCGGTGATACGAGATACTGCTGTGGGTGACACAAGATACCACCCCC
TGGCCCAAACTTCAAAGCTCGACTAATTTATACTCCACGACGAAGAGGAT
GCCAAAATCAAATATTTTGTTTTCGGAACGCTATCGACAAACAGTTCCCA
CGCCACCATTTTTGAAAATCGGTCCAGGGGGTGTGGTATCTTGTGTGCCC
TATCCGACGGTAGTCTGCGGCGAGATCCGGTCAATAGGTACTGCTGTTGT
AGCGGCCATCCAGAATCATGTCGGCTCGGCTGAGGAAGTAGCCTACAAGT
AACGCATATATCCACAGAAGAACGCGAAGGTGGCAGAGCGTTCGGTGTGA
GGTTCGATGAGCGGCAGTGATGTGCTGTATTTCGATCTCTAGGCCGGAGG
AATTCATGGCTGCGCTGGCGCCGCTGACTCCGCCCCTGGCCGTTGAGCCG
TTGATGCTGCTGCTGTTGTTGGCATTCGTCGTTGCCGGCCCTACATGTAG
TGATGGCGATCTCAATCATGCAAGGCAGGTGTACCTGCATTGCTCAGTCG
CCGAGCTCGGAAGCGGCAACCTTACTTCCTCGCGCCACGCCAAACGCGCG
AAGTTCGTCGTTGTGACGACCGCGTTGCTTCAAAGTTGTCCAGATGAACG
AGATTCCGCGGTCTCTGTGAGGATCACCCATGATGAACACATTTAGCTTC
GTGGGTATTGGTCTGGGAGGGGGAAATGAGACATTCTATGCATAGTATCA
TGAAGCAGTCGAAAGGCGGAGAATTTTTTTCTCCCTCTTCCGAGTCAACA
AGATGGTGATGTGATGTTCGCCTCTTGTCTCTTGTCCCCCCCCGTTGTCT
ATCTTGGTACCTACCTATGTATACCTGCCACAGGCACTTTCTGTCTTTCG
CACAGAAGCTACGCGGCTCACTCGTGCCCGGCATCTGGAGACAAGGACTT
TCGAGCCTTGGTGTGTCCCCTCTGCAAGAAGACTGTTCGCTTCAACGCGG
GCCAGGACCCTAACGAGCAGTGAGTAGAATACGGCATCGCCACACGCATT
CCCTCGCCAGCTAGAAAAATCCCGCCGCACCACTGGGGGCCAATGTAGAC
TAGATCTTAAGGACTTGTGTTTGTACTTGATAGATGGCGCGGCCCGAGGG
TTGTTTGTCAGGCATATTTTTTATCATCGCTGTCCTTACGAGCATGGCAT
GGAGCAACGAGAGCAATTCGTGCTCTGTTTTCGGTTGCGTGTGTGAGATG
AGGCAGCGAAGTTGCTTTTTCACCGTAGTGGCGTCGGCCGCGTTCGTCGG
TCCCACAGCGGCTGCTCTCGCCGATCTTACCTCTGGTTTACTAGGTGACG
GCACGTGTTGCTTTGATAAGTGAAGGCTAGCAAAATGTTGTTGCTCTGTA
TTCTACAGCATGGATTGAATCGAATCACAAGCCAGCCCGTGTTACCAGTT
GTTTCTGCGGCGAGTGTATAACCTCTGGCGTGCCAGTGCTTAGTGCTTAG
TCTACAGGCAGAACTCTTCTTCGGTTCTGCGGACCCCCCTATTATAGTCA
CGGGCGCTGCTCGCGTACAGCAGCTCCATATGGGGGGCTGCTGCTCTATT
AGTTCTGAGCTGTTTGTGCCGTGACGGTGATCCGTTCATGGCGCTGACTG
TATTTTCGCTGTCATTTTGTGCTTGCTCTGTGCCTCCTGTGCGTGTTCTC
GATTCTGTATGGTTGTTTTCGGTAGTTTTCACATCAGTTGGTCAGCGGTT
TCCATGGCCTCGACGTGCCGGGACCTAAAAGCTTGCGATACTAGGCCTGA
TGTCTGGCTGGTCTGTGGCCTTGTTTTTCGGTGCTTGTTGATGTTTTATC
TGTTTTTCTCCTGGGTCCGAGCAGGTGGGATTTGCACACGAGAACAGACT
GCAACCCCGCGGACTACAAGAGGAACAAGCCGACAAAGAAGAGGTGCGGC
GGCGGATGTTATTTTGCGTATTCATGATCTAGCCATTGGACCACGAGCCA
TGCGCCTCTTGCGCGACGCAACACCGTTCCTACTCTACATAGCTGCGGTC
CAGGTAGAGTGTACACGATTTCCTTTGCCTCCCAAGCTCTCCTCACGCCG
TTGTATGCACGCAACTAGGCTCGGTTTTTGTTCTTGTCATCGTGCCTGCC
AGTACTAGGCGACGTTACGAGCGCACCCGATTCTGAGACGATTTCCGCAC
CGTCTACCTTTTCACCCTGCTTGTCGGTGCGGCATCATGAAGATGCTTGG
TAAAAACCGCAGCCTATAACAACAACCACGGGAACCTGCATGACTACAAT
ACTGTTTGCTTTTTCTGGTGAGAGCCACTCCCGTCTTTGCGGCCTGCAGC
AAGGCGGCGCCCATAATGCATCCCCCTTCCCGTACATGTATAACATAATC
GTGTGTGCTTGGGGCCATCGCATCCCGCATTGGCCTTCGCACAACAGATG
TGCAGCGGCGAGCTGTCGGGTGGTGCTCGGACCGACGAACACACAGCGGT
GTGCCAGCTGCGGCAAGGAGACATGCTTGACTCACAGGTTCCCTGACAGG
TGCGTGGTGCCTCTAGGCTACGTTAGACAGACTTCCTGACAGTCTGTGCG
ACATCTGGTATTTAGTGTCAGTGCTCATGACATGATGGAATACCGAGTCA
CTGATCCCGTCTCACACGAAAGGGGCAGGGACGACCTTCTATCGAGGTAG
CGTTCGGATTTTACAATACCGCCTTCAACATGGCCGAAAACACGAGAGAG
ACTCTCGTGTCGCTCGCCGTATTGCTTGAGTTCCGCGCTCAATTGTTATC
GTCTGGCATCCACAATGGCACAATCATCACGACCCTGTTTTCGTCTAAAG
AGCGAGTGTCTCGACCTCGAAACCGAATTGTTCATGGGCACGGTGACAGG
CATTTCGCGGTCGATCGTTGCGGTACGTAACCGTTGTCGTTGCTGTTGCC
GTCCATGGACAACCCAGTCATAACTGCAGCGCGTCCAGCCGTGGCGATGC
GAGGGCTTTCGCAGCGGGCGCTGCTGCTAGGCGAATGTCAGCGCAGGCCA
ACCAATCGCGTCCAATGTCGCTGAGGGAAAAGGCAGCACAGAGGAGGGCT
GCCGCATCGTCCCACCGCGACGCCGGCGCGAATACGGCTCGGGTGAGACC
GGCGTGCTTCAATGCGTTGTTGTTGTTATCCTGTAAGAGTTCGGGGTCGC
TTGTTGCTGCGTTGTCTATTGTTTGGTTGTGGTTGAGGTAGTCGACACAT
CTTCGGCGATGAGGTGCGCACGACCGTGGCGACAGCAGTGCGGGCATGCA
CGTATGGCACCCGGAGCAATTGCCGCCATGGACAGACCTAAATAACGATC
TTCGGTGCCCCAGTTTCGAATGACGTGGTGTAACTGACGTGGTTTTAAGA
GTTTTACAGCTTGAGCGGAGATTGCGGTCGAAGTGCTGCTTGTAGGTCGC
TCTTTACTCCGCTAGGACGGTACGTGGACATGAACAAGTTCGCCCGATAT
GTGGTTATTGATAGGCTCCGAACGGGATCGTGCTGACCTTGTACGGTGCG
GTCTTGTCATGCTGCAGTAGGCCACGGTGAGTTACACCCCACAGTCAGTT
ACGACGGACACCCGGCAACCGCACGAGAGTGTAGTCGAGAACCCTCTAAA
TCATAACTGACGTTCCCGGACAGTGGTGTCCAGAGAGGTTCCCGTAGCCA
CCCGTGATCCTTCCGTGCAGCGTCACACCCTTGTGCGGATGCTTGGCTGC
GGTTCGGGAATACTGCTGTGCCGCAAGTCCACTTGAGCCTATGCACCCCC
CACCAATCCTCCTCAAACACGTTCTTGGTCCAAGTGGTGGCAGTGTGTAC
CAAGGCCTTTGTAGAACATTTCTGGGACTTGCTTGGACCTTTGACAAAAG
TGAAATACGCTCTCATGCAAGTTTCTTGCACCAGCAGCCCTCGTCCCCCT
AGGCTTTGCTATGCGCTGAGGGCATGAACGACATATTTTTTTGAAGTGCT
GGCACGTTATGGTCCGGCGTTTACTCGACCGACACCATTCACCGACACCA
TTACCATTCGCAAGATTCGTTACCGGCAGCTTGCACCGAACGAACGAAAC
ACCTGCTAAAGAACTGCAGGTATTTGGTAGCAAAGACTTAATGTGATAGC
ATTGCTTGTGCAATCCACCCTTCACGTTTAGGTGTTTGTATATTCTGAGG
GTGTTGTGCTCACGGCACTTATTGTCCGACATTCGAGGTTTCGTGCTTCG
CTACGGTCTTCCGAGTATCGAGGGAGCATGTCCGTTGACAGCACGTTGGC
GAGATCGGACAAATGTCCTGCAGCTAGATGCGGCTGTACCATCTAACACA
GAGCTTGGCCCAATGCACTCACTGCGTGTCGCTGTAGGCTACCGCCGATC
GAAGGAGAAGGGAGAATCCGGCGGCGCAAGCGCGAAGCTTAGGGGGTGGT
GGCGGGCACAGCGAGCAATGCCCGCAATGTGGAGCTACCTTTGGGGATAT
TGGATCGCTTGTGGCCCACGTAGAGGCCTTTCATTCAGAGGTGACAGGAA
AGTGTGTGTGTAAAAGACCAACTTGATGGCAGCAGGTGGTTCGTGCGAGC
TTGGAGGTTTCGAAATGACGCTATCTATTTCGTGTTTGTTGAGGGCTGTT
CCACCTGCAACTGTCAACATGTCCTGCATTACGGTGGTGCCTCGTGTTTT
CCGTCTGGCCGTCTGTCGCAACCCCAGAAGCATGCTCTTGGCGAGCGGTT
TCCTTCTACTGACCATCCTACGGAGTATGTGCTCTACCGAGCCACCACGA
GCCGCAAGGTCAAGGAGGTTTTTGTACAATAGTTCCCCTGGGTCGCTGGT
TTCTTGCTAAATATTCGTTCTTCAAGAAGTGGTGATTCGGTGCCGTGGAG
TTGCTTAACTCCACCCACACCTTCGTCGCGCTCGCCTTCGTTTGTTTTCC
AATCCCTAGGGGCAGCAGTTTCATGCACACGGCGGTGGCGGCGGCGGAGG
TGGCAGTAACGCAGGGGAGACTTGCCCGATTTGCAATCTCCATTTTCCTG
ACGTCGCGCTGCTGGTTTCACACGTGGAGGCGGCACACCCCGACGGTGCT
CAGGGGAACGCGACGTCCAGCGGAGCAAGCTCTTGCTCAATATCTTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig841:2613..8560+

>mRNA_E_fasciculatus_S2_contig841.16544.1 ID=mRNA_E_fasciculatus_S2_contig841.16544.1|Name=mRNA_E_fasciculatus_S2_contig841.16544.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=915bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig841:2613..8560+ (Ectocarpus fasciculatus EfasUO2)
ATGCCGGAGTTTACGGGCGTCGGGAAGCACTGCGGGGCAGAGAACTGCAA
TCAGCAGGACTTCCTTCCGTTCCAGTGTGACTGTTGTGACGGCACTTTCT
GTCTTTCGCACAGAAGCTACGCGGCTCACTCGTGCCCGGCATCTGGAGAC
AAGGACTTTCGAGCCTTGGTGTGTCCCCTCTGCAAGAAGACTGTTCGCTT
CAACGCGGGCCAGGACCCTAACGAGCAGTGGGATTTGCACACGAGAACAG
ACTGCAACCCCGCGGACTACAAGAGGAACAAGCCGACAAAGAAGAGATGT
GCAGCGGCGAGCTGTCGGGTGGTGCTCGGACCGACGAACACACAGCGGTG
TGCCAGCTGCGGCAAGGAGACATGCTTGACTCACAGGTTCCCTGACAGTC
ATAACTGCAGCGCGTCCAGCCGTGGCGATGCGAGGGCTTTCGCAGCGGGC
GCTGCTGCTAGGCGAATGTCAGCGCAGGCCAACCAATCGCGTCCAATGTC
GCTGAGGGAAAAGGCAGCACAGAGGAGGGCTGCCGCATCGTCCCACCGCG
ACGCCGGCGCGAATACGGCTCGGGCTACCGCCGATCGAAGGAGAAGGGAG
AATCCGGCGGCGCAAGCGCGAAGCTTAGGGGGTGGTGGCGGGCACAGCGA
GCAATGCCCGCAATGTGGAGCTACCTTTGGGGATATTGGATCGCTTGTGG
CCCACGTAGAGGCCTTTCATTCAGAGGGGCAGCAGTTTCATGCACACGGC
GGTGGCGGCGGCGGAGGTGGCAGTAACGCAGGGGAGACTTGCCCGATTTG
CAATCTCCATTTTCCTGACGTCGCGCTGCTGGTTTCACACGTGGAGGCGG
CACACCCCGACGGTGCTCAGGGGAACGCGACGTCCAGCGGAGCAAGCTCT
TGCTCAATATCTTGA
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