mRNA_E_fasciculatus_S2_contig8398.16530.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL6_ECTSI) HSP 1 Score: 1026 bits (2652), Expect = 0.000e+0 Identity = 672/755 (89.01%), Postives = 688/755 (91.13%), Query Frame = 1
Query: 427 VEHSVQSKRKPQXXXXXXXXXXXXXXXXXLDLLPQNLPLGAAVGLXXXXXXXXXXXXTNARDQLRNGPDITVKXXXXXXXXXXXXXFRRSALATALSTDERVGLCIGARTDAPARCAGQVRDRRISPPNXXXXXXXXXXXXXXXXLASTPPSLSAEDRVALCQGAAEESPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAPAHCAKAAFRAGADRHLAAVXXXXXXXXXXXXXXAAAPRQIPADVRVETCIGALSTSPALCLAASGPLELQAQPDGGAICPLDPEAGRRPRRGVDHRLAARLCRDAIDDKPARCARAAPFRMSDADVEVLCAAGGRPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSLSGAGAPSASEVEECQEAVPRPSRLHIMDLGHEGETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSSKVL 2691
VEHSVQSKRKP LDLLPQNLPL AAVG XXXXXXXXXXXXTNARDQLRNGPDITV+XXXXXXXXXXXXXFRRSALATALSTDERV LC+GARTDAPARCAGQVRDRRISPPN XXXXXXXXXXXXXXXLASTPPSLSAEDRV LCQGAAEESPT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSAAPAHCAKAAFRAGADR LAAVXXXXXXXXXXXXXX AAPRQIPADVRVETC ASGP ELQ QPD A+CPLDPEAGRRPRRGVDHRLAAR+CRDA+DDKPA CARAAP RMSD+DVEVLCAA G+PGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNS+SGAGAPSASEVEEC+EAVPRPSRLHI DLGHEGETLFPDQPMHATLEV DQWGGKI DSSTVVRAS+ALRGSNGAVANAHGRFNTSD GVVHFSHLSFSGSGNLTLQFFIDG+D+K G ANVPLAAARV VEETEHGAI+RRCRAVFSRLACPWPVKGEG SGEWVSDVG+ TGAP Q+RPSSSVATEAVS VSGGAGAAWYVMTCQQVLEENGINVAYV SPSTEPL ALLWYHPGIETLETGAGLPTRDQP WERLGVDRD SGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFEL+GDAYEWMVSSSK L
Sbjct: 12 VEHSVQSKRKPHLVVDVCKGASNVAPAECLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVGLCQGAAEESPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAPAHCAKAAFRAGADRRLAAVXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQGQPDWEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDSDVEVLCAADGQPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHKDSSTVVRASVALRGSNGAVANAHGRFNTSDVGVVHFSHLSFSGSGNLTLQFFIDGNDSKDVGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGASGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVYSPSTEPLLALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSKAL 766
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW3_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.160e-47 Identity = 123/327 (37.61%), Postives = 167/327 (51.07%), Query Frame = 1
Query: 1741 GAGAPSASEVEECQEAVPRPSRLHIMDLGHEGE--TLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGV-ETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSSKVLGENNQGV 2712
G GA +A ++E+C+ A P + + + +L H GE L+ + A LEV+DQWG + DS T VRAS+A RGSNGA GR N + DGVV FSHL+FS GNLTL+F + G+ LA+A + V ET+ A R C AV L CP SD A +L + + +S W + C L G VA P +A +WY P +E L TG G+PT ERLG+ SG ++RRAYYR+SL WHPDRW R+ + RAQ VFEL+ +AY + + +K+ +
Sbjct: 469 GGGA-TARQIEDCRGAAPVHTSIGVRELKHAGEGGVLYTGARVEAVLEVKDQWGRFMEWDSGTYVRASLAPRGSNGAFIGGAGRVNATVDGVVRFSHLTFSAPGNLTLRFDVGGAH----------LASALLRVVETKEAAFARACGAVVRALRCP-------------SDAAAARRAAAAELNAADEIFALVPPPLS------WNAIVCGGALRNQGFRVA----PGWRR-AAWVWYTPAVEALATGRGVPTPLMTALERLGLGEGASGGDVRRAYYRESLRWHPDRWARHPALAERAQAVFELVSEAYAELRAGAKLAATGQESA 760
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUI0_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.580e-35 Identity = 106/315 (33.65%), Postives = 152/315 (48.25%), Query Frame = 1
Query: 1762 SEVEECQEAVPRPSRLHIMDLGHE---GETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRC-RAVFSRLACPWPVKGEGTS----GEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSS 2682
S VE C+ A PS + I+ + + G+ +F +H TL+V DQ+G +L D+ T+V A++ S GA+ R N S GVV +L FS G L F I G+ V + V+ E + +C + F++L P +S G+ + V+ PSS EA+S +C ++LEE G+ V S +WY P +E L+TG GLPT W RLG+ S R++R+AYYRQSL+WHPDRW Y +H AQD FE+I +AY +VS S
Sbjct: 7 SLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGN--------RVQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMS-------------SCSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 291
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUF7_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.120e-33 Identity = 132/434 (30.41%), Postives = 190/434 (43.78%), Query Frame = 1
Query: 1450 PARCARAAPFRMSDADVEVLCAAGGRPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSLSGAGAPS---------------ASEVEECQEAVPRPSRLHIMDLGHE---GETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRC-RAVFSRLACPWPVKGEGTS----GEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSS 2682
P CA AP+ SD+D+ LC R +DCA + + A LC ++S AP CA + + +A S + A P S VE C+ A PS + I+ + + G+ +F +H TL+V DQ+G +L D+ T+V A++ S GA+ R N S GVV +L FS G L F I G+ V + V+ E + +C + F++L P +S G+ + V+ PSS EA+S +C ++LEE G+ V S +WY P +E L+TG GLPT W RLG+ S R++R+AYYRQSL+WHPDRW Y +H AQD FE+I +AY +VS S
Sbjct: 255 PMDCALTAPYGFSDSDIIALC----RHADPRASDCARS-APPSLPASIRARLCARSTSTAPARCAVASPFSMHRP--MANAQAHKAEEPVVALCSQAAAPTPGHCASFLARQQGRELVPSLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGN--------RVQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMS-------------SCSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 651
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN52_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.040e-10 Identity = 88/328 (26.83%), Postives = 140/328 (42.68%), Query Frame = 1
Query: 1747 GAPSASEVEECQEAVPRPSRLHIMDLGHEGETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHF-SHLSF-SGSGNLTLQFFID-GSDNKHAGPANVPLA------AARVTV-EETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSG--GAGAAWY--VMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHS--ARAQDVFELIGDAYEWMVSSS 2682
GA + S V EC+ VP P+ L I + + L P + L V DQ+G ++ S + +R S+ G + D V+H +H +GS T FFI+ G GPA P AR+ + E+ + RRCRA+F++L C GA + +P S A + V V + Y V+ C+ E+ + + + ST + A+ +H L T A +P+ W LG+D + ++R AY+R+SL WHPD+W + S RA V+ + AY ++ +
Sbjct: 575 GAVTRSLVLECRAVVPVPASLEIAQVSYRCRQLVPKCRLSVQLRVHDQFGVEMQSWTGGYLRVSVTP---------TEGTAPEAGDRVLHGPTHAPIINGSAAFTDIFFIEPGEFVVTFGPAAAPTLLSITEKVARIRIHEDAQERLRSRRCRALFAQLEC---------------------GADRTEQPGPS-ANDTVGEVFHLFELPSRHYLDVLGCEGFWLEHSGGMRVLGATSTRFVLAI--HHASYRFL-TNARVPSAGMSAWACLGLDEGANRSQIRHAYHRKSLEWHPDKWSGASTRSLQGRAAQVYARVTLAYNELLQDA 868
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH3_GLOUD) HSP 1 Score: 69.3 bits (168), Expect = 2.520e-8 Identity = 69/317 (21.77%), Postives = 130/317 (41.01%), Query Frame = 1
Query: 1768 VEECQEAVPRPSRLHIMDLGHEGETLFPDQPMHATLEVRDQWGGKILSDSSTVVR--ASIALRGSNGAVANAHGRFNTSD------DGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAI-IRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYV--MTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRW--VRYAIHSARAQDVFELIGDAYEWMVSS 2679
++EC+ AV P+ I + ++ L P+ + +L V DQ+G ++ + + V A+ SN + GR +G F +SF+ +G + F + + + R+ + E + + +RC+A+F+R C +T P + S+ +Y+ M+C+ E+ + + + S L + H T A +P + PW LG+ + ++RRAY+R+SL WHPD+W + A+A+ ++ LI AY + +S
Sbjct: 404 IQECRYAVATPASTEIAQVSYQCRELIPNCLITISLRVLDQFGEEMPAWTGGYVHIAATPTTDTSNTEHMTSEGRILVGQSHALIVNGTAVFKDISFAEAGEFIITFRPPSASSSSLIGVFLEEKIVRIRIHEDKLAQLRTKRCKALFARFQCSRD----------------DTADPFHVLDLSN---------------RFYLDAMSCEAFWHEHTGGLRFQGTTSQRLLYVI---HRASYHFLTDASIPHAEMSPWACLGLASSANRSQIRRAYHRKSLEWHPDKWSSADTIMLRAQAEKIYALITHAYHVLFNS 686
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: Hypothetical (protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAI0_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.760e-8 Identity = 84/372 (22.58%), Postives = 132/372 (35.48%), Query Frame = 1
Query: 1756 SASEVEECQEAVPRPSRLHIMDLGHE--GETLFPDQPMHATLEVRDQWGGKILSDSSTVV-RASIALRGSNGAV--ANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFID-------------GSDNKHAGPANVPLAAARVTVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLW--YHPGIETLETGAGLPTRDQPPWERLGVDRDTSG------------------------------------------RELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSSK 2685
S +V +C + + + E G + + E+ DQ+G L + AS+ GAV N G++ + L S SG + + FI+ G N +GP V L R+TV E + C + + CP T EW S+ ++R S V+ + + C + + +N S + LW Y G+++L TG G+P + P ERLG+ + G +E+RRAYYR+SL WHPDRW +++ Q FELI +AY + + K
Sbjct: 23 SVDDVNKCVHTKQEIKTIRVKKILTEDNGIEIMAGKRFSLHFELLDQYGRTFLDPHQEFLFSASLNNNNPQGAVLWGIRSNYTNPKIPGMLELNSLVISQSGEVDFKIFINMRTGTSGTSSGGSGKGNAVSGPKLVDLF--RLTVLEDPVVSSALPCIYLLQQTTCPL---NSNTVSEWESEF-------PRIRSYSPVSNYLRNVL------------CAEAMTGMHVN-------SFVGVQGDLWAEYRLGVDSLWTGVGMPRLEMSPMERLGLSTNAEGLIVSDHPDNDKXXXXXXXXXXXXXXXXSNALGNTRKRERAMQKEIRRAYYRKSLQWHPDRWAGMGMYALPVQAAFELINEAYNSLTNEEK 363
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: DnaJ (family protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI11_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.210e-7 Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 2341 AWYVMT--CQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIH-SARAQDVFELIGDA 2658
AW+++ C+ L + G+ + + SP L G L G G+PT + E LGV+ + + +LR+AYYR SL WHPDRWV + ++A DVF+ I A
Sbjct: 1092 AWWLLARGCEDELADIGVQL--LRSPQPIAHGVFLHIKSGPAKLLAGIGVPTEEMSAEEILGVEANATSSQLRKAYYRASLEWHPDRWVSFHPDLQSQAADVFQRIATA 1198
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAI0_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 8.930e-5 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 2506 WERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQDVFELIGDAYE 2664
+ERLGV R+ + R++R AY R +L WHPDRW + + A A+D+F+L+ ++YE
Sbjct: 4 YERLGVPRNATDRQIRSAYKRLALKWHPDRWTNNSANPQEQASAEDIFKLLAESYE 59 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8398.16530.1 >prot_E_fasciculatus_S2_contig8398.16530.1 ID=prot_E_fasciculatus_S2_contig8398.16530.1|Name=mRNA_E_fasciculatus_S2_contig8398.16530.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=907bp MGSIPKQVRPRPGQKSRPLSKHSQRLYYYCLLACAVVVPCSCQGSLSAVKback to top mRNA from alignment at E_fasciculatus_S2_contig8398:1510..5334- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8398.16530.1 ID=mRNA_E_fasciculatus_S2_contig8398.16530.1|Name=mRNA_E_fasciculatus_S2_contig8398.16530.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3825bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8398:1510..5334- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8398:1510..5334- >mRNA_E_fasciculatus_S2_contig8398.16530.1 ID=mRNA_E_fasciculatus_S2_contig8398.16530.1|Name=mRNA_E_fasciculatus_S2_contig8398.16530.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2721bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8398:1510..5334- (Ectocarpus fasciculatus EfasUO2)back to top |