mRNA_E_fasciculatus_S2_contig839.16518.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP93_ECTSI) HSP 1 Score: 709 bits (1831), Expect = 2.400e-253 Identity = 401/515 (77.86%), Postives = 424/515 (82.33%), Query Frame = 1
Query: 1 MPSTSAIDQVCEDGTPTERLVLSEVHVGSSSLHEEAEVVSRYAYLTPTSNGDNADSXXXXXXXXXXXEQTSRRVARHRKRPRHEVAQRCCRPSHEVLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPLAIPDDDAG-PRDAGGGDSDVQVESGTFGSGVCSSDGGEARSGSCVAAVRKLDWFTFSEEQGGTDVATCDPLEEDQVREMASPAPPSEADCAGTGDVKSNTHDGRTA----CGPFSWRKGELDGMSPKPGSKRGGLVIVAADVIYDEGLTEALFEALKLLMPEPSLRTRGLGKE-----GSVLKAADNVTTPISHQTTPSAKATPGRLDSAGTTDVPVCAK------NP-GKDAVLYLALEKRFNFSVAELSVAATGYNALLRNVLDVTEQEGAGVEVDGCKQQGLTSAK-AFEGKRLPLSFEQCFRYERSNAMELWEIRRRPASSEFS 1491
MPSTSA++++CEDGTP ERLVLSEVHVGSS LHEEAEVVSRYAYLTPTS+ DN DS XXXXXXX EQT RVARHRKRPRHEVAQRCCRPSHEVLTIVHKMATTLGLVGQQVWSA+FLLGDFVLTH+ELF G QVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLL RNVEANRHLFALEP A DDDA PR AGGGDSDVQVESGT SGV SSDGG ARSG CVAAVRKLDWFTFS+EQ DV TCD LEEDQ + SPA PSEADCAG GDV++NT+D RT CGPFSWRKGELDG+S SKRGG VIVAADVIYDEGLT+ALF+AL LLMP PSLR RGLGKE V ADN T P+ HQTTPS TP DSA T VPV +P G +AVLYLALEKRFNFSVAELSVAATGY+ALLRNV+DVTE +G G VDGC QQGL SAK AFEG+RLPLSF+QCFRYERSNAMELWEIRRRP SSE S
Sbjct: 1 MPSTSAMEKICEDGTPAERLVLSEVHVGSSGLHEEAEVVSRYAYLTPTSD-DNEDSGXXXXXXXE--EQTRPRVARHRKRPRHEVAQRCCRPSHEVLTIVHKMATTLGLVGQQVWSASFLLGDFVLTHNELFVGMQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLDRNVEANRHLFALEPSATHDDDAAAPRAAGGGDSDVQVESGTLCSGVRSSDGGRARSGDCVAAVRKLDWFTFSKEQDSLDVTTCDSLEEDQAQ---SPAFPSEADCAGMGDVQNNTNDDRTTGTGTCGPFSWRKGELDGLSLISDSKRGGPVIVAADVIYDEGLTDALFQALTLLMPVPSLRARGLGKEDRNCDSKVSSTADNATKPLPHQTTPSTTPTPSCEDSA-VTYVPVSKPVDDHDCHPLGTNAVLYLALEKRFNFSVAELSVAATGYSALLRNVVDVTENDGVGTGVDGCTQQGLKSAKKAFEGRRLPLSFQQCFRYERSNAMELWEIRRRPVSSEIS 508
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F3_9PHAE) HSP 1 Score: 676 bits (1743), Expect = 6.440e-240 Identity = 390/516 (75.58%), Postives = 413/516 (80.04%), Query Frame = 1
Query: 1 MPSTSAIDQVCEDGTPTERLVLSEVHVGSSSLHEEAEVVSRYAYLTPTSNGDNADSXXXXXXXXXXXEQ--TSRRVARHRKRPRHEVAQRCCRPSHEVLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPLAIPDDDAGPRDAGGGDSDVQVESGTFGSGVCSSDGGEARSGSCVAAVRKLDWFTFSEEQGGTDVATCDPLEEDQVREMASPAPPSEADCAGTGDVKSNTHDGRTA----CGPFSWRKGELDGMSPKPGSKRGGLVIVAADVIYDEGLTEALFEALKLLMPEPSLRTRGLGKEG-----SVLKAADNVTTPISHQTTPSAKATPGRLDSAGTTDVPVCAK------NP-GKDAVLYLALEKRFNFSVAELSVAATGYNALLRNVLDVTEQEGAGVEVDGCKQQGLTSAK-AFEGKRLPLSFEQCFRYERSNAMELWEIRRRPASSEFS 1491
MPSTSA++ +CEDGTP ERLVLSEVHVG S+LHEEAEVVSR+AYLTPTS GDN D XXXXXXXXXXX T RVARHRKRPRHEVAQRCCRPSHEVLTIVHKMATTLGLVGQQVWSA+FLLGDFVLTHDELFAG QVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEP A+ DDDA PRDAGGG SDVQVE+GT SGV S DGG RSG CVAAVRKLDWFTFS+EQ D+ TC +EEDQ +S EAD AG GDVK+N +D RT CG FSWR GELDG+S SKRGGLVIVAADVIYDEGLT+ALFEALKLLMP PSLRTRGLGK+G S ADN T + H TTPS ATP D A TDVPV +P G DAVLYLALEKRFNFS AELSVAATGYNAL+RNV VTE+ G G VD C QQGL SAK FEG+RLPLSF+QCFRYERSNAMELWEIRRRP S E S
Sbjct: 5 MPSTSAMENICEDGTPAERLVLSEVHVGGSNLHEEAEVVSRFAYLTPTS-GDNEDXXXXXXXXXXXXXXXXTRPRVARHRKRPRHEVAQRCCRPSHEVLTIVHKMATTLGLVGQQVWSASFLLGDFVLTHDELFAGMQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPSAVLDDDAAPRDAGGGYSDVQVENGTLCSGVRSRDGGGPRSGDCVAAVRKLDWFTFSKEQDPPDLTTC--VEEDQRHAFSS-----EADIAGMGDVKNNPNDDRTTGTGTCGRFSWRDGELDGLSNISDSKRGGLVIVAADVIYDEGLTDALFEALKLLMPVPSLRTRGLGKDGRNCNGSNSSTADNATKTLPHHTTPSTTATPSCEDLA-VTDVPVSKPVDDHECHPLGTDAVLYLALEKRFNFSAAELSVAATGYNALMRNVEIVTEENGVGTGVDDCTQQGLQSAKKGFEGRRLPLSFQQCFRYERSNAMELWEIRRRPESREIS 511
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Uncharacterized (protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAN9_9EUKA) HSP 1 Score: 111 bits (278), Expect = 9.620e-24 Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 1
Query: 283 EVLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEP 558
EVLTIVH M T++ VG QVW A LLGDF+L + ELF +++LG G G GLIA+R+A++CYLTD+ +EVLK RNV N HLF +P
Sbjct: 56 EVLTIVHHMDTSIHYVGLQVWRGALLLGDFILNNQELFKNATIMELGCGSGFSGLIASRIAKKCYLTDFDEEVLKNCQRNVSLNSHLFEKDP 147
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Uncharacterized (protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LHT7_RHOSS) HSP 1 Score: 96.7 bits (239), Expect = 3.520e-18 Identity = 106/405 (26.17%), Postives = 156/405 (38.52%), Query Frame = 1
Query: 268 CRPSHEVLTIVHKMATTLGLVGQQVWSAAFLLGDFVL----THDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPLAIPDDDAGPRDAGGGDSDVQVESGTFGSGVCSSDGGEARSGSCVAAVRKLDWFTFSEEQGGTDVATCDPLEEDQVREMASPAPPSEADCAGTGDVKSNTHDGRTACGPFSWRKGELDGMSPKPGSKRGGLVIVAADVIYDEGLTEALFEALKLLMPEPSLRTRGLGKEGSVLKAADNVTTPISHQTTPSAKATPGRLDSAGTTDVPVCAKNPGKDAVLYLALEKRFNFSVAELSVAATGYNALLRNVLDVTEQEGAGVEVDGCKQQGLTSAKAFEGKRLPLS-FEQCFR-YERSNAMELWEIR 1464
C ++ V+TI HK+ +++ VG QVW A +L DFVL T E F G ++LGAG G+VG++ ARVA+ +LTD+ +EVL A NV N SG+ S+ A VR+LDW ++ T V +E Q +E ++W E++ + +I+AADVIY + LT+A F+ L+ LM K P + V YLALEKR+NF++ +L+V A GY+ + D E C S F GKR+ L+ Q R Y+R N +E+W+I+
Sbjct: 111 CEKNNYVVTIQHKITSSIPSVGLQVWRAELILADFVLHKMVTSSE-FDGIVAIELGAGTGLVGILLARVAKTVFLTDHGEEVLDNCADNVRLN------------------------------------SGIIHSE--------ASAHVRELDW----KDSWPTKV-----VENSQAQER------------------------------YAWTSVEVEELQKAS-------LIIAADVIYSDDLTDAFFKTLERLM-----------------------------------KLRP--------------------EKVAYLALEKRYNFTLDDLNVVANGYSHFRSYLRDEGE----------CNDLKSRSLPCFVGKRIDLADIPQYMREYDRGNDVEIWQIK 359
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Methyltransferase (like 22 n=1 Tax=Felis catus TaxID=9685 RepID=M3VWM3_FELCA) HSP 1 Score: 95.1 bits (235), Expect = 2.150e-17 Identity = 79/256 (30.86%), Postives = 113/256 (44.14%), Query Frame = 1
Query: 283 EVLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPLAIPDDDAG---------PRDAGGGDSDVQVESGTFGSGVCSSDGGEARSGSCVAAVRKLDWFTFSEEQGGTDVATCDPLEEDQVREMASPAPPSEADCAGTGDVKSNTHDGRTACGPFSWRKGELDGMSPKPGSKRGGLVIVAADVIYDEGLTEALFEALKLL 1023
+++ I H MAT L VG+QVW A LL D++L +LF G+ VL+LGAG G+ +IAA VAR Y TD ++L + RN+ N HL A + D +G P A GG + S + SG GG V V++LDW D+ T DP +V PFSW + ++ + +++AA+V YD+ LT+ALF+ L L
Sbjct: 149 DIVRIEHTMATPLEDVGKQVWRGALLLADYILFQRDLFQGRTVLELGAGTGLASIIAATVARTVYCTDVGADLLAMCQRNIALNGHLTAAGESSSCDGSSGHPPLTVRADPSRAAGGALPLSGRSSPWASGP---PGG-------VVKVKELDWLR-------DDLCT-DP------------------------EV------------PFSWSQEDVSDLYSHT------TILLAAEVFYDDDLTDALFKTLSRL 344
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Methyltransferase (like 22 n=3 Tax=Salmo trutta TaxID=8032 RepID=A0A673ZNW0_SALTR) HSP 1 Score: 93.6 bits (231), Expect = 7.190e-17 Identity = 77/244 (31.56%), Postives = 104/244 (42.62%), Query Frame = 1
Query: 283 EVLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPLAIPDDDAGPRDAGGGDSDVQVESGTFGSGVCSSDGGEARSGSCVAAVRKLDWFTFSEEQGGTDVATCDPLEEDQVREMASPAPPSEADCAGTGDVKSNTHDGRTACGPFSWRKGELDGMSPKPGSKRGGLVIVAADVIYDEGLTEALFEAL 1014
+V+ I H MAT L VG+QVW AFLL D +L+ F G VL+LGAG G+ ++ A VA+ Y TD +++L + +NV NRHL +EP GGE R VR LDW GG T ++ M S AD + + S D A F W + E+ + +I+AADV YD+ LT+ALF L
Sbjct: 156 DVIRIEHTMATPLEDVGKQVWRGAFLLADLILSQPTTFRGATVLELGAGTGLTSVVMATVAKTVYCTDVGEDLLSMCQKNVTLNRHL--MEPA----------------------------------GGEVR-------VRLLDWLRHDLCTGGQATRTHTHXHFEKHTHMMLNHGLS-ADLSSSSPFISCFSD---ADAEFGWTEDEVADLHDNT------TIIIAADVCYDDDLTDALFRTL 346
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Methyltransferase (like 22 n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0DU82_9SAUR) HSP 1 Score: 92.0 bits (227), Expect = 1.820e-16 Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 280 HEVLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHL 543
++++ I H MAT L VG+QVW FLL D++L+ +LF G+ VL+LGAG G+V +IAA+ A+ Y TD +++L + RN+ N+HL
Sbjct: 153 YDIVRIEHTMATPLEDVGKQVWRGGFLLADYILSKQDLFQGRTVLELGAGTGIVSIIAAKAAQTIYCTDIGEDLLDMCERNIALNKHL 240
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: 4-aminobutyrate (aminotransferase, mitochondrial n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UBE5_ACIRT) HSP 1 Score: 93.6 bits (231), Expect = 2.050e-16 Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 286 VLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPLAIP 570
V+ I H MAT L VG+QVW AFL+ DF+L+H +LF G VL+LGAG GV ++ A VA+R Y TD ++L + RNV N+H+ +P
Sbjct: 97 VIRIEHTMATPLEDVGKQVWRGAFLMADFILSHRDLFQGCTVLELGAGTGVTSIVMATVAKRVYCTDVGQDLLSMCERNVALNKHILESGGRRLP 191
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: methyltransferase-like (protein 22 isoform X1 n=3 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F082433) HSP 1 Score: 91.3 bits (225), Expect = 4.030e-16 Identity = 96/393 (24.43%), Postives = 145/393 (36.90%), Query Frame = 1
Query: 283 EVLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALEPLAIPDDDAGPRDAGGGDSDVQVESGTFGSGVCSSDGGEARSGSCVAAVRKLDWFTFSEEQGGTDVATCDPLEEDQVREMASPAPPSEADCAGTGDVKSNTHDGRTACGPFSWRKGELDGMSPKPGSKRGGLVIVAADVIYDEGLTEALFEALKLLMPEPSLRTRGLGKEGSVLKAADNVTTPISHQTTPSAKATPGRLDSAGTTDVPVCAKNPGKDAVLYLALEKRFNFSVAELSVAATGYNALLRNVLDVTEQEGAGVEVDGCKQQGLTSAKAFEGKRLPLSFEQCFRYERSNAMELWEI 1461
+V+ I H MAT L VG+QVW AAFLL D +L+ F G VL+LG+G G+ ++ A +A+ Y TD D++L + RN+ N+HL LEP GG+ R VR+LDW D+ T DG T F W + E+ + I+AADV YD+ LT+ F+ +V + DN HQ +Y+A+EKR NF++ + V+ Y+ + ++ E G G TS F+ +++ +F Q +YER +ELW++
Sbjct: 163 DVIKIEHTMATPLEDVGKQVWRAAFLLADLILSEPATFRGTTVLELGSGTGLTSVVMAIMAKTVYCTDIGDDLLSMCQRNMTLNQHL--LEPT----------------------------------GGDMR-------VRELDWLRH-------DLCT----------------------------------DGDTE---FGWTEEEVADLYDNT------TFIIAADVCYDDDLTDGFFK--------------------TVYRLCDNF-----HQA-----------------------------CTVYVAIEKRLNFTLRHMDVSCEAYDHFRHCLSEMQEMMG-----------GRTS---FKVQQVAPAFPQHLQYERIEQLELWKV 394
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Match: Methyltransferase (like 22 n=4 Tax=Oryzias TaxID=8089 RepID=A0A3B3C4Y9_ORYME) HSP 1 Score: 90.9 bits (224), Expect = 5.170e-16 Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 286 VLTIVHKMATTLGLVGQQVWSAAFLLGDFVLTHDELFAGKQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANR 537
VL I H MAT L VG+QVW A LGDF+L+H +LF G +LDLGAG G+ ++ A AR Y TD ++VL L RNV N+
Sbjct: 140 VLKIEHTMATPLEEVGKQVWRGALFLGDFILSHPDLFRGATILDLGAGTGLTSIVMATTARTVYCTDVGEDVLSLCKRNVSLNK 223 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig839.16518.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig839.16518.1 >prot_E_fasciculatus_S2_contig839.16518.1 ID=prot_E_fasciculatus_S2_contig839.16518.1|Name=mRNA_E_fasciculatus_S2_contig839.16518.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=499bp MPSTSAIDQVCEDGTPTERLVLSEVHVGSSSLHEEAEVVSRYAYLTPTSNback to top mRNA from alignment at E_fasciculatus_S2_contig839:1667..4591+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig839.16518.1 ID=mRNA_E_fasciculatus_S2_contig839.16518.1|Name=mRNA_E_fasciculatus_S2_contig839.16518.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2925bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig839:1667..4591+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig839:1667..4591+ >mRNA_E_fasciculatus_S2_contig839.16518.1 ID=mRNA_E_fasciculatus_S2_contig839.16518.1|Name=mRNA_E_fasciculatus_S2_contig839.16518.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1497bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig839:1667..4591+ (Ectocarpus fasciculatus EfasUO2)back to top |