mRNA_E_fasciculatus_S2_contig838.16510.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G091_ECTSI) HSP 1 Score: 493 bits (1268), Expect = 7.000e-168 Identity = 243/257 (94.55%), Postives = 253/257 (98.44%), Query Frame = 2
Query: 86 MARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKAVEGK 856
MARK+LIGGNWKCNGT ENVAALV++LN+GGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNV+PGAYTGELCASMIKDFGVEWVITGHSERRVGFGC GESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTL+EADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWV +K+SPAVAESLRIIYGGSVK+SNAAELATCPDIDGFLVGGASLKP+F DIIKAVEGK
Sbjct: 1 MARKFLIGGNWKCNGTRENVAALVEVLNEGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVRPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCAGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLEEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVGEKVSPAVAESLRIIYGGSVKSSNAAELATCPDIDGFLVGGASLKPDFVDIIKAVEGK 257
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH06_9STRA) HSP 1 Score: 332 bits (852), Expect = 1.750e-105 Identity = 164/258 (63.57%), Postives = 199/258 (77.13%), Query Frame = 2
Query: 86 MARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGC-GGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKAVEGK 856
M RKY+IGGNWKCNGT V+ LV LN G+FP NAEVV+AP + + VKD +R D+ VS QN + GAYTGE+ MI DFG++WVITGHSERR GFG GE+S+++A+K+K A++ GL VI C+GESL REA TL++VLE+H+AA L + W++VVVAYEPVWAIGTG TASP QAQ+VH++IR+W+SDK+SP VAE+ RIIYGGSVK SNA LA C DIDGFLVGGASLKPEF DII AVEGK
Sbjct: 1 MPRKYVIGGNWKCNGTVAQVSDLVSTLNKAGDFPSNAEVVIAPTFLHVPMVKDAVRSDVNVSLQNCSVD-SFGAYTGEIAPEMIADFGLKWVITGHSERRTGFGGQAGETSEIVAKKTKKAIEAGLTVIACVGESLDEREAGNTLKVVLEEHLAAIADALSQEQWAKVVVAYEPVWAIGTGKTASPEQAQDVHASIRSWLSDKVSPEVAEATRIIYGGSVKGSNAGTLADCADIDGFLVGGASLKPEFIDIINAVEGK 257
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HJE1_HETAK) HSP 1 Score: 331 bits (848), Expect = 1.280e-104 Identity = 167/274 (60.95%), Postives = 208/274 (75.91%), Query Frame = 2
Query: 26 PSTHHHHAPPQPRTHNPSTTMARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKAV 847
P HHH + + S+TM+RKYLIGGNWKCNGT E+V ALVK LN+GG+FP NAEVV APP +F+ VK IRPDI VSTQNV K+ PGA+TGE+ A MIKDFG++W ITGHSERR GE+S+++AEK+KVA+D GL V+ C GE+L REA +T+E+V DH+AA + L ADW+ VV+AYEPVWAIGTG ASP QAQEVH+ IRA+++ ++S VA++ RIIYGGSVK +NAAE+ + DIDGFLVGGASL +F II AV
Sbjct: 8 PKDHHH------QRSDASSTMSRKYLIGGNWKCNGTKESVEALVKTLNEGGDFPANAEVVCAPPMLFIDYVKTNIRPDIAVSTQNVAKSASPGAFTGEIVAPMIKDFGLDWCITGHSERR---SMEGETSEIVAEKTKVAIDAGLKVMFCCGETLEEREAERTMEVVNNDHIAALIAKLAPADWANVVIAYEPVWAIGTGKVASPEQAQEVHAQIRAFLASQVSQEVADTTRIIYGGSVKGANAAEIGSGADIDGFLVGGASLTADFLTIINAV 272
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLS5_VITBC) HSP 1 Score: 311 bits (796), Expect = 2.600e-96 Identity = 158/248 (63.71%), Postives = 188/248 (75.81%), Query Frame = 2
Query: 101 LIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKA 844
IGGNWKCNGT ++VA LVK+LN+GG FPD EVVVAPP++ + V+D+IR DI VSTQNVG GAYTGEL +MIKDFGV W ITGHSERR GFG GESS+L+A+K+K AL+ GL VI C+GE REA +T++ V+ + M A + L +DWS VVVAYEPVWAIGTG+TA+P QAQ+ + IR W++D ISP VA S RIIYGGSVKA NAAEL PDIDGFLVGGASL +F II A
Sbjct: 63 FIGGNWKCNGTKKSVADLVKLLNEGGNFPDKVEVVVAPPALHVGYVQDSIRKDISVSTQNVGLPKAYGAYTGELSGNMIKDFGVNWCITGHSERREGFGMAGESSELVAKKTKAALEQGLKVIPCVGEKKEEREAGKTMD-VISEQMKALVAELSPSDWSNVVVAYEPVWAIGTGLTATPQQAQDTQADIRKWMADNISPEVAASTRIIYGGSVKAGNAAELFAEPDIDGFLVGGASLTSDFIAIINA 309
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I5M8_9ALVE) HSP 1 Score: 297 bits (760), Expect = 3.380e-91 Identity = 150/257 (58.37%), Postives = 194/257 (75.49%), Query Frame = 2
Query: 77 STTMARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCG-GESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKA 844
++ ARK +IGGNWKCNGT ++VA LVK+LNDGG FPD EV+V+PP + + VKD +R DI+V+TQ++ GAYTGE+ +MIKDFG+ WVITGHSERR GFG GES D++A K+++ALD GL V+ CIGE REA T++ V++ M A +K L DW+ +V+AYEPVWAIGTG+TA+P QAQ+ H IR W++ K+SP++AE++RI+YGGSVKA+NA EL PDIDGFLVGGASL EF II A
Sbjct: 41 TSLFARKPVIGGNWKCNGTKQSVADLVKLLNDGGSFPD-CEVIVSPPYLHIGYVKDNLRNDIEVATQDLLAKEGFGAYTGEISGAMIKDFGLNWVITGHSERRDGFGGQPGESDDVVALKTRIALDQGLKVMPCIGEKKEQREAGTTMD-VIDAQMTALVKVLKPEDWANLVLAYEPVWAIGTGLTATPQQAQDTHKGIRDWIAQKVSPSIAENVRILYGGSVKAANAEELFAEPDIDGFLVGGASLNKEFIAIINA 295
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSZ2_9STRA) HSP 1 Score: 293 bits (751), Expect = 2.650e-90 Identity = 149/253 (58.89%), Postives = 182/253 (71.94%), Query Frame = 2
Query: 92 RKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKAVE 850
++YLIGGNWK NGT A +VKILN GG P AEVV+APP+ L VKD +RPD+ VS QN KPGA+TGEL A ++KDFG+ WVI GHSERR GFG GES +++A K+KVA+D GL+V+ C+GE L REA +T E+VL + A L DWS+VV+AYEPVWAIGTG A+P QAQEVH +IRA+V +K+ A LRIIYGGSVK S+A L PDIDGFLVGGASL +F II+AV+
Sbjct: 19 KRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQ-LNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVK 270
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W460_9STRA) HSP 1 Score: 293 bits (749), Expect = 5.220e-90 Identity = 144/253 (56.92%), Postives = 190/253 (75.10%), Query Frame = 2
Query: 86 MARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKA 844
+ +K L+GGNWKCNGT V LV++LN P N EVVV P ++ + ++P+I+V QN GA+TGE+ AS +KDFG++W +TGHSERR GE+++ +A K+K+A+D G+ VI C+GE L R+A +TL++VL + MA+FL TL ADW+ V +AYEPVWAIGTG TA+PAQAQEVH+AIR W+++++SPAVA ++RI+YGGSVKA+NA ELA CPDIDGFLVGGASLKPEFADII A
Sbjct: 25 VGKKMLVGGNWKCNGTAAKVGQLVEMLN-AAPVPPNVEVVVCPVALHIPAAVAGLKPEIQVGAQNCCLT-GTGAFTGEIAASQLKDFGLKWTLTGHSERREM----GETNEQVATKTKLAVDAGIQVIACVGEKLETRKAGKTLDVVLNEQMASFLATLAPADWANVAIAYEPVWAIGTGETATPAQAQEVHAAIRQWIAEQVSPAVAAAVRIMYGGSVKAANAPELAQCPDIDGFLVGGASLKPEFADIIGA 271
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Phosphoglycerate (mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV1_9STRA) HSP 1 Score: 300 bits (769), Expect = 4.630e-89 Identity = 146/275 (53.09%), Postives = 193/275 (70.18%), Query Frame = 2
Query: 86 MARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADW--SRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKAVE------GK*NPLPRIILL 886
M +K+ +GGNWKCNG + LVK+LN+ GE P+ EVV+APP +++ V + +RPDIK++ QNV K+ KPGAYTGE+ +KDFGV+WVITGHSERR G E+S ++A+KS+VAL GL VI C GE+L R+ N TL +VL H+ + +DW + +V+AYEPVWAIGTG++A+P QAQ+VH AIR W+SDK+SP +A RIIYGGSV N L CPDIDGFLVGGA+LKPEFADII+ + G P +++L+
Sbjct: 48 MGKKFFVGGNWKCNGNNLMGSVLVKMLNNCGEIPECTEVVIAPPMLYMGPVMENLRPDIKMAAQNVAKHPKPGAYTGEVVGETLKDFGVDWVITGHSERRANQG---ETSAIVAKKSQVALAAGLKVIFCCGETLQDRQRNNTLNVVLNQHLLGLKAAVRRSDWEANNIVIAYEPVWAIGTGLSATPQQAQDVHLAIRQWLSDKLSPKIAAQTRIIYGGSVNGKNCGTLIQCPDIDGFLVGGAALKPEFADIIRCAQPPGYTLGGPKPAHKLVLI 319
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPG6_9STRA) HSP 1 Score: 286 bits (731), Expect = 3.050e-87 Identity = 144/252 (57.14%), Postives = 177/252 (70.24%), Query Frame = 2
Query: 89 ARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKA 844
ARKY+IGGNWKCNGT +V ALVK LN+ G P N EVVV P I + V T+R DI+V+ QN G N K GAYTGE+CAS + D GV WVI GHSERR GF GESSDL+A+K K+A+D GL V CIGE REA T+++ E AA K L E DW++ +AYEPVWAIGTG+TA+P A+E H IR W+S +S AVA ++RI YGGS+K +NA L P+IDG L+GGASLKP+F +I+ A
Sbjct: 28 ARKYIIGGNWKCNGTVADVKALVKTLNECGPIPTNTEVVVGVPFIHIPLVLSTLRSDIEVAAQNCGVNAKAGAYTGEICASQLLDLGVTWVILGHSERREGFEMAGESSDLVAKKVKIAVDAGLKVQFCIGEKKEEREAGITMKVCAEQLEAAS-KVLSEDDWAKTTIAYEPVWAIGTGLTATPEMAEETHKDIREWMSKNVSEAVASAIRIQYGGSMKGANAEGLLAKPNIDGGLIGGASLKPDFFNIVNA 278
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Match: Triosephosphate (isomerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW33_HETAK) HSP 1 Score: 286 bits (733), Expect = 5.560e-87 Identity = 140/251 (55.78%), Postives = 182/251 (72.51%), Query Frame = 2
Query: 92 RKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVKPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCGGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLDEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVSDKISPAVAESLRIIYGGSVKASNAAELATCPDIDGFLVGGASLKPEFADIIKA 844
+KYL+GGNWK NGT E VA+ + +LN+ + P NAEVVVAP + L ++ + +++S+QN+ K+ GAYTGE A M+K+FG+ W ITGHSERR GE+S+++A K+K+A+D GL V+ C GE+L REA + ++VL D A L DW+ VV+AYEPVWAIGTGVTA+P QAQEVH+AIRAW+S + +A + RI+YGGSVK SNAAEL CPDIDGFLVGGASLKPEF DI+ A
Sbjct: 60 KKYLVGGNWKANGTKEQVASWIAMLNEITDIPANAEVVVAPTWLHLPAAQNGVTSGVQISSQNIAKHSGYGAYTGETTAQMLKEFGINWCITGHSERRA---MEGETSEIVAAKTKLAIDNGLKVMFCCGETLEEREAGKLNDVVLADQCTALKAALQPEDWASVVIAYEPVWAIGTGVTATPEQAQEVHAAIRAWLSSDVHSDIAAATRILYGGSVKGSNAAELIQCPDIDGFLVGGASLKPEFKDIVAA 307 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig838.16510.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig838.16510.1 >prot_E_fasciculatus_S2_contig838.16510.1 ID=prot_E_fasciculatus_S2_contig838.16510.1|Name=mRNA_E_fasciculatus_S2_contig838.16510.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=258bp MARKYLIGGNWKCNGTTENVAALVKILNDGGEFPDNAEVVVAPPSIFLQTback to top mRNA from alignment at E_fasciculatus_S2_contig838:1516..11489+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig838.16510.1 ID=mRNA_E_fasciculatus_S2_contig838.16510.1|Name=mRNA_E_fasciculatus_S2_contig838.16510.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9974bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig838:1516..11489+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig838:1516..11489+ >mRNA_E_fasciculatus_S2_contig838.16510.1 ID=mRNA_E_fasciculatus_S2_contig838.16510.1|Name=mRNA_E_fasciculatus_S2_contig838.16510.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=774bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig838:1516..11489+ (Ectocarpus fasciculatus EfasUO2)back to top |