mRNA_E_fasciculatus_S2_contig835.16483.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig835.16483.1
Unique NamemRNA_E_fasciculatus_S2_contig835.16483.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI)

HSP 1 Score: 558 bits (1438), Expect = 8.460e-198
Identity = 289/325 (88.92%), Postives = 293/325 (90.15%), Query Frame = 1
Query:    1 MMSRFRPVVLVLRQRRSFSGVVEGASGAASQSLAERGY--VKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTF 969
            MMSRFRPVVL  +QRR+FS VV+GA   ASQSLAERGY  VKGLRVLDDVTVARLRVRLPLLFRGEF+TGVYPDEMHWREGISRDDAPREIVNAWKADR VASVVLSEHL RLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDRE                 GSAADSSTS S LPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPG CVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDA FIDGHSLQ TGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTF
Sbjct:    1 MMSRFRPVVL--QQRRTFSVVVDGA---ASQSLAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDRE-----------------GSAADSSTSRSSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTF 303          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL)

HSP 1 Score: 264 bits (674), Expect = 1.950e-80
Identity = 148/311 (47.59%), Postives = 185/311 (59.49%), Query Frame = 1
Query:   55 SGVVEGASGAASQSLAERGYVKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDS-ARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGADASNYRAPAEAAALSLG---RRVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFAS 975
            SG +   S A  Q     GY+   R++      R+R R   LF G+FETGVYPDE HWREG+S   A REIVN WK DR+VAS+ LSE LG LA+ L GW+  ARIAQDDV+WKPPG+  +GYHQDSAYIS QF P  NNSVT+WIALD+   E G +EYA  +    A     A  S+ H+          S++RA   AAA ++G     V+FE  +V  GGC++H  D WHGS PN S + HRRAL VH LR D  F      +G   P YIY RY    S ++ E  FP+ ++ DGYR+  + T  S
Sbjct:  125 SGSLTMLSAAQIQQFHSVGYLCLPRLIAPDLAIRIRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPENGAVEYALGSHKWRAQATETATDSSFHTD---------SDHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLSTACS 420          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP)

HSP 1 Score: 256 bits (653), Expect = 1.370e-78
Identity = 136/292 (46.58%), Postives = 172/292 (58.90%), Query Frame = 1
Query:   76 SGAASQSLAERGYVKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGADASNYRAPAEAAALSLGR---RVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDG 942
            S  A +S   +G+++  +VL++  V   R R+  LF GEF+TG+YPDE HWR+GIS   A REI N WK+DR++AS+VL E  GR A  L GW SARIAQD V+WKP G+G V +HQDS YISRQFTP  +NS+T W ALDD D E G IEYA            + +        P FHG    +Y+ P   AA S G+   +VE   + V  G  VVH Q+ WHGS  N S QR RRAL +H LRGD  F++         P YIY RYK  D++ L +  FP  +  DG
Sbjct:   56 SDEAKRSFWSKGFLQLGQVLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEETGVIEYA----------AGSHEWQPRRELEPQFHGLQ--DYQQPLRQAAASAGKDLSQVEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.830e-77
Identity = 155/363 (42.70%), Postives = 199/363 (54.82%), Query Frame = 1
Query:   88 SQSLAERGYVKGL-RVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDSARIAQDDVVWKPPGSGP----------------VGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMT---TPLPAPEGSAA------DSSTSHSPLP-------------SFHGADASNYRAPAEAAALSLG------------RRVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATF------------IDGHSLQGTGGPS-YIYSRYKSLDSNRLPEEAFPITFSKDGY-----RTGWIDTF 969
            S+ + +RGY K   R+L       +R R+PL+FRG F+TGVYPDE HWREGIS   A REI NAWK+DR VASVVL E +G+L A + GW+S R+AQDD+VWK P  G                 VG+HQDSAYIS+QF+P  NNS+T+WI+LDD D E G +EYA  +    PL    GS +      D+S+  + +P             SFH + ++ YR     AA+S G              V  EA  VK G  + H QD WHGS PN S  RHRRALVVH+L+GD  F            +   S     GP+ YIY RYK   S  + E+ FPI +++D       RT W+D+F
Sbjct:   87 SRDIYQRGYAKSKGRILSKDRCLAIRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEESGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEGSLLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSF 449          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA)

HSP 1 Score: 250 bits (638), Expect = 3.380e-76
Identity = 147/315 (46.67%), Postives = 187/315 (59.37%), Query Frame = 1
Query:   97 LAERGYVK-GLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDSARIAQDDVVWKPPGS--------------------GPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTP----LPAPEGSAAD---SSTSHSPLPSFHGADASNYRAPAEAAA--LSLGRRVE-FEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGT------GGPSYIYSRYKSLDSNRLPEEAFPITF 930
            L+ RG+     ++L   T A++R RLP LFRGEF+TG YPDE HWREGIS++ A REI NAWK+DR +ASVVL+E LGRL A +  WDS RIAQDD+VWKPP                        VG+HQDSAYIS QF P  +NSVT+W+AL+D D+E G +EYA  +      L   EGS  +   +S S S + SFH AD ++YR     AA     G   E  EAV VK G  + H QD +HGS PN+S  RHRRALV H++RGD +F+   S   +      G  SYIY RY+  +S  +    FP+ +
Sbjct:   26 LSARGFAPTNHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKESGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Phytanoyl-CoA (dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA)

HSP 1 Score: 249 bits (635), Expect = 4.140e-76
Identity = 144/301 (47.84%), Postives = 180/301 (59.80%), Query Frame = 1
Query:   43 RRSFSGVVEGASGAASQSLAERGYVKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWD-SARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGADASNYRAPAEAAALSLG---RRVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNRLPEEAFPITFS 933
            RR  S      S  AS  LA  G+V   +VL D  V R R R   LF+G F+TG+YPDE HWREGIS+ DA REIVN WKAD  +A VV S  LG+LA  L GW   AR+AQDDV+WKPP +G V +HQDSAYIS QF P  NNSVT+WIALDD D++ G +EY   +   P     A +++ S S   +FHG   +++  P   AA S G     +E + + V+ G  +VH QD WHGSA +VS+ RHRRAL VH +R D T+ D      T  P YIY RY         +E FP T++
Sbjct:   25 RRLSSTTAPVVSADASAKLARDGFVAVGKVLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDTGVVEYCVGSHLWP--NNKAKETTASGS---AFHGQ--AHHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.750e-75
Identity = 139/302 (46.03%), Postives = 182/302 (60.26%), Query Frame = 1
Query:   37 RQRRSFSGVVEGASGAASQSLAERGYVKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDS-ARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGADASNYRAPAEAAALSLGRR-VEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNRLPEEAF-PITFS 933
            R   SF GV+   S    +S    G++    ++D+ TV  L+ R   LF G+FETG+YPDE HWREGISR DA REIVN WKAD +V SVV S+ +G++A++L GW + +R+ QDD++WKPP +G V +HQD+AYIS QF P  NNSVT+WIALDD D E G +EY   +        S+A SS  HSP        +  Y  P   AA   G++  E   VAV  GG + H QD WHGSA NVS  RHRRAL +H ++ D  +      +    P YIY RY  L  +  PE++F P+T+S
Sbjct:   19 RHVHSFGGVL---SVTEQESFRRNGFLLVPNLIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEETGVVEYCPGSHLWDESGPSSAVSSAFHSP--------SEGYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYV-LPGSHTPEDSFFPVTYS 302          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA)

HSP 1 Score: 243 bits (621), Expect = 3.550e-74
Identity = 139/305 (45.57%), Postives = 175/305 (57.38%), Query Frame = 1
Query:   76 SGAASQSLAERGYVKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDS-ARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGADASNYRAPAEAAALSLG-RRVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNRLPEEAF-PITFSKDGYRTGWIDTFASLP 981
            + AA  +    G+V    V+       LR     LFRG+F  GVYPDE HWREGIS+ DA REIVN WKA  +VA V LSE +GRLAA L GW + AR+ QDD++WKP G+G V +H D+AYIS  F P  +NSVT+WIALDD D E G + YA  +   P    SAAD   +     +FHG   +  R PA  AA + G    +FE + V  GG V H QD WHGS PNVS +R RRAL +H++R DA F +         P YIY RY   + +    E F PI ++  GYR+   D   + P
Sbjct:    3 AAAARSAFRRDGFVARPGVVAAGEAKVLREHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRPYEDNSVTVWIALDDADAETGVVAYAPGSHAWP----SAADKEKASVTDAAFHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRSPVCDIACADP 297          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC)

HSP 1 Score: 239 bits (609), Expect = 1.220e-72
Identity = 130/292 (44.52%), Postives = 161/292 (55.14%), Query Frame = 1
Query:   76 SGAASQSLAERGYVKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGADASNYRAPAEAAALSLGR---RVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDG 942
            S  A  S    G+V+   VL    V   R R+  LF G+F+TG+YPDE HWR+GIS   A REI N WK+D+ +AS+VL E  GR A  L GW SARIAQD ++WKP G+G V +HQDS YIS+QF P  NNS+T W ALDD D E G IEYA+ +    A    A          P FH A   +Y+     AA S G+   +V    + V  G  V H Q+ WHGS  N S  R RRAL VH LRGD  F++         P YIY RYK  + + L +  FP  +   G
Sbjct:    6 SKEARTSFRREGFVQLGEVLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEETGVIEYASGSHEWEADRELA----------PEFHAAR--DYQQGLRRAAASAGKEMSQVNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277          
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Match: EctD (protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812ULF0_9DINO)

HSP 1 Score: 236 bits (601), Expect = 6.600e-71
Identity = 138/295 (46.78%), Postives = 172/295 (58.31%), Query Frame = 1
Query:   76 SGAASQSLAERGYVKGLRVLDDVTVARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVASVVLSEHLGRLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSPLPSFHGAD--ASNYRAPAEAAALSLGRRVEFEAVAVKPGGCVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPS---YIYSRYKSLD-SNRLPEEAFPITFSKDG 942
            S +  ++  + G++    +LD    A LR     LF G+F TG+YPDE HWREGIS+ D  REIVNAWK+  +VA+V L     +LAA L GW S R+ QDDV+WKP G+  VGYHQDSAYIS+ F P A NSVT+WIALDD D E G +EYA  +   PA + SA DS+        FHGA+   S+ RA A AA   L    E + + V  G  V H QD WHGS PN +  R RRAL VH LRG             G PS   YIY RY   + S+ + E+ FPI +S +G
Sbjct:    4 SESERRAFQKDGFLLVENLLDAEAAAELRSHFAELFAGKFPTGIYPDEWHWREGISKPDKFREIVNAWKSSPLVAAVALRARTAQLAAELMGWKSTRLGQDDVLWKPAGASGVGYHQDSAYISQNFVPVAENSVTVWIALDDADAETGVVEYAVGSHRWPAAKASAGDSA--------FHGAEDELSSVRAAAAAAKAEL----EIKRLKVPCGAAVFHHQDVWHGSGPNTTKDRPRRALGVHLLRG----------LPFGRPSAQDYIYGRYVLAEGSSEVNEQFFPILWSGEG 276          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig835.16483.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized8.460e-19888.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.950e-8047.59protein n=1 Tax=Eutreptiella gymnastica TaxID=7302... [more]
Hypothetical1.370e-7846.58protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S... [more]
Hypothetical1.830e-7742.70protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical3.380e-7646.67protein (Fragment) n=1 Tax=Minutocellus polymorphu... [more]
Phytanoyl-CoA4.140e-7647.84dioxygenase domain-containing protein 1-like n=1 T... [more]
Hypothetical1.750e-7546.03protein n=1 Tax=labyrinthulid quahog parasite QPX ... [more]
Hypothetical3.550e-7445.57protein n=2 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized1.220e-7244.52protein n=1 Tax=Guillardia theta (strain CCMP2712)... [more]
EctD6.600e-7146.78protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=15... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig835contigE_fasciculatus_S2_contig835:9095..11808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score558.1
Seed ortholog evalue2.7e-156
Seed eggNOG ortholog2880.D7G6W5
Model size1318
Hectar predicted targeting categorymitochondrion
Exons5
EggNOG free text desc.Phytanoyl-CoA dioxygenase (PhyH)
EggNOG OGs2BUAT@1,2S22Y@2759
Cds size999
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig835.16483.1prot_E_fasciculatus_S2_contig835.16483.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig835 9095..11489 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842494.0833654-CDS-E_fasciculatus_S2_contig835:9094..93581696842494.0833654-CDS-E_fasciculatus_S2_contig835:9094..9358Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig835 9095..9358 +
1696842494.0967286-CDS-E_fasciculatus_S2_contig835:9511..97061696842494.0967286-CDS-E_fasciculatus_S2_contig835:9511..9706Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig835 9512..9706 +
1696842494.1074455-CDS-E_fasciculatus_S2_contig835:10233..102911696842494.1074455-CDS-E_fasciculatus_S2_contig835:10233..10291Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig835 10234..10291 +
1696842494.126703-CDS-E_fasciculatus_S2_contig835:10578..109041696842494.126703-CDS-E_fasciculatus_S2_contig835:10578..10904Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig835 10579..10904 +
1696842494.1380014-CDS-E_fasciculatus_S2_contig835:11333..114891696842494.1380014-CDS-E_fasciculatus_S2_contig835:11333..11489Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig835 11334..11489 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842494.1468499-UTR-E_fasciculatus_S2_contig835:11489..118081696842494.1468499-UTR-E_fasciculatus_S2_contig835:11489..11808Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig835 11490..11808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig835.16483.1

>prot_E_fasciculatus_S2_contig835.16483.1 ID=prot_E_fasciculatus_S2_contig835.16483.1|Name=mRNA_E_fasciculatus_S2_contig835.16483.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=333bp
MMSRFRPVVLVLRQRRSFSGVVEGASGAASQSLAERGYVKGLRVLDDVTV
ARLRVRLPLLFRGEFETGVYPDEMHWREGISRDDAPREIVNAWKADRIVA
SVVLSEHLGRLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQ
FTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPAPEGSAADSSTSHSP
LPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGGCVVHAQDCWHGS
APNVSAQRHRRALVVHFLRGDATFIDGHSLQGTGGPSYIYSRYKSLDSNR
LPEEAFPITFSKDGYRTGWIDTFASLPSDVLQ*
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mRNA from alignment at E_fasciculatus_S2_contig835:9095..11808+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig835.16483.1 ID=mRNA_E_fasciculatus_S2_contig835.16483.1|Name=mRNA_E_fasciculatus_S2_contig835.16483.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2714bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig835:9095..11808+ (Ectocarpus fasciculatus EfasUO2)
ATGATGTCAAGGTTCCGGCCTGTGGTGCTCGTGCTCAGACAACGGCGTTC TTTCTCTGGCGTCGTTGAGGGTGCCTCTGGTGCAGCTTCACAAAGCTTGG CCGAGAGAGGATATGTGAAAGGGTTGCGTGTCCTCGACGACGTGACGGTA GCAAGACTTCGGGTGAGACTACCTCTCCTCTTCCGAGGCGAATTCGAAAC TGGTGTTTATCCCGATGAGATGCACTGGCGGGAAGGGATATCGAGGGACG ACGCACCGCGCGAGGTAGGCGGTTGTAGTGTATGGTGTGCTGCAACCTCA GGATGTCGACACATGATCTTTACGATGTCTACACATGAACTTTACGGCTC CGTCTGCCTGGGCCTGTGTACCCATATCTCCCAAATTAAGACCTGCGTGC TGTCATGATTTGTTCAGATCGTCAACGCGTGGAAGGCAGATCGTATCGTC GCCTCAGTCGTGCTAAGCGAACACCTCGGAAGGCTCGCTGCTTCGCTAGC AGGGTGGGACTCGGCTCGAATTGCGCAGGACGATGTGGTGTGGAAACCCC CAGGGTCTGGCCCTGTTGGCTACCATCAAGATTCGGCGTACATCAGCAGG CAATTTACTCCGGTGAGTGGCCGCTGAACATTGTCACGGACCTGATATAC TGTAGTTCCCAAACGATGCAGTCTCCTTGAGATGAACTGTATGTCTACGA TGGCTAAACCATACCCATCCTTGACGTGTCAAAATCACCAGCAGCCTCGA ACCGTAATATGTGGACTAGTGCTCACACGGTACTAATGTAGGAAAAATAT ATGCAAACACAGAAAGACTACCCGTTCGAGATATAGAGATATACCTACAG TTGGAGGGGGTGTGTTGAAGTCTTTGGAGTGAGTGGGAAGAAAACACAAA AACCGGCCATGGTATGTAGAACCATCGCCCAATCCCCCCTCCGTCAAAAA GCCACGAGCGGTGTAATATCACGGACCCTGGGATTCAAAACGTGGCCGTC TGTATTGGCTTTGCTGCTGTCTGTATCTTTTTGGTAGGCTCTCAAATATC CTTCAACTTCCCATTCTCATTTTTTGCCGTCCCCGCTTACACCTGCATGT ATGCATATGGATGTGTGTGTGTACATCTGGCTGCCCCAGAGAGCGAACAA CTCTGTGACGATGTGGATTGCGTTGGATGACTGCGATCGGGAGGTAGGTG AGCATGGCATGAACAAAGTCTGGACGATCGGTACATGTTTCAGTCGCGTT GTTTCTTTCGGCGTGATGCCACGTTCAGCTTGAAGCAGCGGCAACCAAAG AAAAATCGAATTACTGTAACAGCACGGGCTGCCTCATCATGTGCAGGCGT GGACAGGCTACACCCCGCTTTTATGTGCCGTCCGTCGATAATCCGGCTGT GTGACTGAGTGATATTCATGCGTTAATCCAAACAAGCCGCCGACTTCTTA GCGAAACACCTGGCTGGGTGCATTATGCCTGCAGGAACGATCGAGTATGC CACCATGACGACACCGCTCCCAGCCCCGGAAGGGTCGGCGGCCGACTCCT CCACAAGCCACTCCCCCCTGCCTTCTTTTCACGGAGCCGATGCGTCCAAC TACCGAGCACCGGCAGAGGCGGCGGCTTTAAGCCTCGGGCGCCGGGTTGA GTTTGAGGCCGTCGCTGTAAAGCCCGGAGGGTGTGTGGTGCACGCGCAGG ACTGCTGGCACGGGAGCGCCCCCAACGTTTCTGCGCAGCGCCACCGTCGT GCCCTAGTGGTACACTTCCTCAGGGGAGATGCGACATTCATCGACGGACA CTCGCTTCAGGTGACAGCAGTGGTTTGTTTTCCTTGGTGTGTTGTGCATT GCAAGTGGTACCCAGTAGGCAGGGGAAATGCGCAGATCGAGATATGGATG CAGAGAAAATTCGTGGGAGAGAAATGATCACATGGTATCCTCTCCTCCAC GTTGGGGTGGGTGCAACCTACGACGTAGTTGTCGCCTCTATCCTCGATCA CTAGCTGTGCGCAACGTGAAGGTTTGCTTTGGAGCAAAAACCCTACAATA CGTTTGTGTGTCGCCAAGAACTTTCAAACTTTTCAAGTGTTGGTGTTGGA TGTTGTTGTTCACCATCCTTCCTTCCTTCCCGGACCGTTTTCCTTTTAAC ATCCTAACATCCTCGTACTCATGTGACGGGTGCTGTGCTGTTCTGTTCTG TTCTTCGTTGTCCGTCGCGATCAACAACAACGGTTTCAGGGAACGGGCGG CCCATCGTACATTTACAGCAGGTACAAGAGCTTAGACAGCAACCGGCTGC CGGAAGAGGCGTTTCCCATCACCTTCTCCAAGGACGGATATCGAACAGGG TGGATCGACACCTTCGCTTCACTTCCTTCTGATGTCTTACAATAGGCTAT GGCACTTGTCTGGCTTTTGTATCACGTGACGTGCGGCCAAGAAGCAAGAA TTCACCCCTACTAGTAGTTGTTGAGTCCATCCGGAGTTACAGCATGATAT CGTGTCTGAGTCTGGCAGCAAGTGATGGAGACCTTTCCTGGCCTGCTAGA ATCTACTCTCGACGCGATCTCTTGTCGACCGACAAGATTGAGAGGGGATG AACGGACGTACAGCAGTGGTTTGGCAATAACAGCAGATCTAGAGGAGTTT TGAACTTCTTTTCGACATCTCCCGGTATGTCAACGGTGTGCATCAACGCG GGTTCCAGACCGGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig835:9095..11808+

>mRNA_E_fasciculatus_S2_contig835.16483.1 ID=mRNA_E_fasciculatus_S2_contig835.16483.1|Name=mRNA_E_fasciculatus_S2_contig835.16483.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=999bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig835:9095..11808+ (Ectocarpus fasciculatus EfasUO2)
ATGATGTCAAGGTTCCGGCCTGTGGTGCTCGTGCTCAGACAACGGCGTTC
TTTCTCTGGCGTCGTTGAGGGTGCCTCTGGTGCAGCTTCACAAAGCTTGG
CCGAGAGAGGATATGTGAAAGGGTTGCGTGTCCTCGACGACGTGACGGTA
GCAAGACTTCGGGTGAGACTACCTCTCCTCTTCCGAGGCGAATTCGAAAC
TGGTGTTTATCCCGATGAGATGCACTGGCGGGAAGGGATATCGAGGGACG
ACGCACCGCGCGAGATCGTCAACGCGTGGAAGGCAGATCGTATCGTCGCC
TCAGTCGTGCTAAGCGAACACCTCGGAAGGCTCGCTGCTTCGCTAGCAGG
GTGGGACTCGGCTCGAATTGCGCAGGACGATGTGGTGTGGAAACCCCCAG
GGTCTGGCCCTGTTGGCTACCATCAAGATTCGGCGTACATCAGCAGGCAA
TTTACTCCGAGAGCGAACAACTCTGTGACGATGTGGATTGCGTTGGATGA
CTGCGATCGGGAGGTAGGAACGATCGAGTATGCCACCATGACGACACCGC
TCCCAGCCCCGGAAGGGTCGGCGGCCGACTCCTCCACAAGCCACTCCCCC
CTGCCTTCTTTTCACGGAGCCGATGCGTCCAACTACCGAGCACCGGCAGA
GGCGGCGGCTTTAAGCCTCGGGCGCCGGGTTGAGTTTGAGGCCGTCGCTG
TAAAGCCCGGAGGGTGTGTGGTGCACGCGCAGGACTGCTGGCACGGGAGC
GCCCCCAACGTTTCTGCGCAGCGCCACCGTCGTGCCCTAGTGGTACACTT
CCTCAGGGGAGATGCGACATTCATCGACGGACACTCGCTTCAGGGAACGG
GCGGCCCATCGTACATTTACAGCAGGTACAAGAGCTTAGACAGCAACCGG
CTGCCGGAAGAGGCGTTTCCCATCACCTTCTCCAAGGACGGATATCGAAC
AGGGTGGATCGACACCTTCGCTTCACTTCCTTCTGATGTCTTACAATAG
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